Search

The relations between physical and chemical characteristics (e.g., color, firmness, volatile and non-volatile metabolites) of red ripe strawberry fruit and the natural spoilage caused by Botrytis cinerea were investigated. The spoilage rates differed between genotypes, and this was highly correlated over two successive years. Among seventeen genotypes, a more intense red coloration of the fruit skin was associated with a lower spoilage rate (r = –0.63). Additionally, weakly negative correlations were found between the levels of anthocyanins, ascorbic acid, malic acid and spoilage rates. No clear correlations were found between spoilage rates and soluble sugars, most volatiles, firmness and dry weight percentage. High levels of two volatile compounds, ethyl butanoate (r = 0.55) and 1-hexanol (r = 0.61), were correlated to high spoilage rates. These characteristics may assist strawberry breeders in selecting for genotypes with reduced susceptibility to B. cinerea.

Quality of fresh products is determined by genotype and environmental practices. Light intensity and spectrum are environmental factors which have significant effects on quality. Light can increase the content of metabolites, such as carbohydrates and antioxidants. To maintain shelf life of fresh products low temperature storage is often used during the postharvest phase as the water loss and metabolic rates slows down which will delay senescence. However, crops of tropical origin are sensitive to temperatures below 10-12 °C. One of such crops is basil (Ocimum basilicum L.). Basil suffers from chilling injury (CI) when stored at low temperature. CI is visible within a few days as dark spots on the leaves. Thus, there is a large potential to improve the chilling tolerance of basil. Chilling tolerance may be improved by an increase in carbohydrates and antioxidants such as phenolic compounds. They may scavenge the reactive oxygen species produced during chilling. In this thesis it was investigated if an increase in light intensity and modification of the light spectrum (i.e. an increase in percentage of blue light) could increase the content of carbohydrates and antioxidants resulting in improved chilling tolerance. Furthermore, it was investigated if the addition of far-red (FR) during cultivation would increase the levels of hormones related to chilling tolerance and in turn improve the postharvest chilling tolerance. Light also affects the morphology which is an important quality parameter. Thus, response of growth and morphology to light intensity and spectra was also studied. In a number of experiments basil was grown in a climate chamber in a vertical farming set-up and the effect of light intensity and spectra on at-harvest and postharvest quality were studied.

Basil suffers from chilling injury (CI) when stored at temperatures below 10–12 °C which seems related to the imbalance between reactive oxygen species (ROS) and antioxidants. We hypothesized that increased light intensity applied shortly before harvest (EOP, End-Of-Production) increases nutritional value i.e. carbohydrates and antioxidants and could improve the chilling tolerance. Two basil cultivars were grown in a vertical farming set-up at a light intensity of 150 µmol m−2 s−1. During the last 5 days of growth, EOP light treatments ranging from 50 to 600 µmol m−2 s−1 were applied. After harvest the leaves were stored at 4 or 12 °C in darkness. Higher EOP light intensity increased the antioxidant (total ascorbic acid, rosmarinic acid) and carbohydrate contents at harvest. During storage antioxidants decreased more rapidly at 4 than at 12 °C. However, increased EOP light intensity did not alleviate chilling symptoms suggesting a minor role of antioxidants studied against chilling stress.

Vertical farming is becoming increasingly popular for production of leafy vegetables and herbs, with basil (Ocimum basilicum L.) as one of the most popular herbs. In basil most research has focused on increasing secondary metabolites with light spectra. However, knowledge about the effect of light intensity (photosynthetic photon flux density, PPFD) and spectra on growth and morphology is key for optimizing quality at harvest. The impact of PPFD and spectrum on plant growth and development is species dependent and currently few studies in basil are available. Understanding the response to End-Of-Production (EOP) light of growth and morphology is important for successful vertical farming. We performed a comprehensive series of experiments, where the effects of EOP PPFD, fraction of blue and their interaction on the growth and morphology were analyzed in two green and one purple basil cultivar. In addition, the impact of different EOP intensities and duration of far-red were investigated. We found that increasing the PPFD increased fresh mass, dry matter content and plant height in all three cultivars. The responses were linear or quadratic depending on the cultivar. A high fraction of blue (>90%) increased plant height and decreased the dry mass partitioning to the leaves. The only interaction found between the fraction of blue and overall PPFD was on plant height in the green cultivar whereas other growth parameters and morphology responded stronger to PPFD than to the fraction of blue light. Plant dry matter production was increased with the addition of far-red. Far-red EOP intensity treatments enhanced the fraction of dry mass partitioned to the leaves, whereas a prolonged far-red treatment enhanced partitioning to the stem. Both plant fresh mass and dry matter content were improved by applying high PPFD shortly before harvest. Light spectra were found to be of less importance than PPFD with respect to plant dry matter content. Light use efficiency (LUE) based on

Chromosome breakage elicits transient silencing of ribosomal RNA synthesis, but the mechanisms involved remained elusive. Here we discover an in trans signalling mechanism that triggers pan-nuclear silencing of rRNA transcription in response to DNA damage. This is associated with transient recruitment of the Nijmegen breakage syndrome protein 1 (NBS1), a central regulator of DNA damage responses, into the nucleoli. We further identify TCOF1 (also known as Treacle), a nucleolar factor implicated in ribosome biogenesis and mutated in Treacher Collins syndrome, as an interaction partner of NBS1, and demonstrate that NBS1 translocation and accumulation in the nucleoli is Treacle dependent. Finally, we provide evidence that Treacle-mediated NBS1 recruitment into the nucleoli regulates rRNA silencing in trans in the presence of distant chromosome breaks.

Mdc1 is a large modular phosphoprotein scaffold that maintains signaling and repair complexes at double-stranded DNA break sites. Mdc1 is anchored to damaged chromatin through interaction of its C-terminal BRCT-repeat domain with the tail of γH2AX following DNA damage, but the role of the N-terminal forkhead-associated (FHA) domain remains unclear. We show that a major binding target of the Mdc1 FHA domain is a previously unidentified DNA damage and ATM-dependent phosphorylation site near the N-terminus of Mdc1 itself. Binding to this motif stabilizes a weak self-association of the FHA domain to form a tight dimer. X-ray structures of free and complexed Mdc1 FHA domain reveal a ‘head-to-tail' dimerization mechanism that is closely related to that seen in pre-activated forms of the Chk2 DNA damage kinase, and which both positively and negatively influences Mdc1 FHA domain-mediated interactions in human cells prior to and following DNA damage