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1. Global collision-risk hotspots of marine traffic and the world’s largest fish, the whale shark

Author

Womersley, F.C., Humphries, N.E., Queiroz, N., Vedor, M., da Costa, I., Furtado, M., Tyminski, J.P., Abrantes, K., Araujo, G., Bach, S.S., Barnett, A., Berumen, M.L., Bessudo Lion, S., Braun, C.D., Clingham, E., Cochran, J.E.M., de la Parra, R., Diamant, S., Dove, A.D.M., Dudgeon, C.L., Erdmann, M.V., Espinoza, E., Fitzpatrick, R., Cano, J.G., Green, J.R., Guzman, H.M., Hardenstine, R., Hasan, A., Hazin, F.H.V., Hearn, A.R., Hueter, R.E., Jaidah, M.Y., Labaja, J., Ladino, F., Macena, B.C.L., Morris, J.J., Norman, B.M., Peñaherrera-Palma, C., Pierce, S.J., Quintero, L.M., Ramirez-Macias, D., Reynolds, S.D., Richardson, A.J., Robinson, D.P., Rohner, C.A., Rowat, D.R.L., Sheaves, M., Shivji, M.S., Sianipar, A.B., Skomal, G.B., Soler, G., Syakurachman, I., Thorrold, S.R., Webb, D.H., Wetherbee, B.M., White, T.D., Clavelle, T., Kroodsma, D.A., Thums, M., Ferreira, L.C., Meekan, M.G., Arrowsmith, L.M., Lester, E.K., Meyers, M.M., Peel, L.R., Sequeira, A.M.M., Eguíluz, V.M., Duarte, C.M., Sims, D.W., Womersley, F.C., Humphries, N.E., Queiroz, N., Vedor, M., da Costa, I., Furtado, M., Tyminski, J.P., Abrantes, K., Araujo, G., Bach, S.S., Barnett, A., Berumen, M.L., Bessudo Lion, S., Braun, C.D., Clingham, E., Cochran, J.E.M., de la Parra, R., Diamant, S., Dove, A.D.M., Dudgeon, C.L., Erdmann, M.V., Espinoza, E., Fitzpatrick, R., Cano, J.G., Green, J.R., Guzman, H.M., Hardenstine, R., Hasan, A., Hazin, F.H.V., Hearn, A.R., Hueter, R.E., Jaidah, M.Y., Labaja, J., Ladino, F., Macena, B.C.L., Morris, J.J., Norman, B.M., Peñaherrera-Palma, C., Pierce, S.J., Quintero, L.M., Ramirez-Macias, D., Reynolds, S.D., Richardson, A.J., Robinson, D.P., Rohner, C.A., Rowat, D.R.L., Sheaves, M., Shivji, M.S., Sianipar, A.B., Skomal, G.B., Soler, G., Syakurachman, I., Thorrold, S.R., Webb, D.H., Wetherbee, B.M., White, T.D., Clavelle, T., Kroodsma, D.A., Thums, M., Ferreira, L.C., Meekan, M.G., Arrowsmith, L.M., Lester, E.K., Meyers, M.M., Peel, L.R., Sequeira, A.M.M., Eguíluz, V.M., Duarte, C.M., and Sims, D.W.

Abstract

Marine traffic is increasing globally yet collisions with endangered megafauna such as whales, sea turtles, and planktivorous sharks go largely undetected or unreported. Collisions leading to mortality can have population-level consequences for endangered species. Hence, identifying simultaneous space use of megafauna and shipping throughout ranges may reveal as-yet-unknown spatial targets requiring conservation. However, global studies tracking megafauna and shipping occurrences are lacking. Here we combine satellite-tracked movements of the whale shark, Rhincodon typus, and vessel activity to show that 92% of sharks’ horizontal space use and nearly 50% of vertical space use overlap with persistent large vessel (>300 gross tons) traffic. Collision-risk estimates correlated with reported whale shark mortality from ship strikes, indicating higher mortality in areas with greatest overlap. Hotspots of potential collision risk were evident in all major oceans, predominantly from overlap with cargo and tanker vessels, and were concentrated in gulf regions, where dense traffic co-occurred with seasonal shark movements. Nearly a third of whale shark hotspots overlapped with the highest collision-risk areas, with the last known locations of tracked sharks coinciding with busier shipping routes more often than expected. Depth-recording tags provided evidence for sinking, likely dead, whale sharks, suggesting substantial “cryptic” lethal ship strikes are possible, which could explain why whale shark population declines continue despite international protection and low fishing-induced mortality. Mitigation measures to reduce ship-strike risk should be considered to conserve this species and other ocean giants that are likely experiencing similar impacts from growing global vessel traffic.

Published
2022

2. Reply to: Shark mortality cannot be assessed by fishery overlap alone

Author

Queiroz, N, Humphries, NE, Couto, A, Vedor, M, da Costa, I, Sequeira, AMM, Mucientes, G, Santos, AM, Abascal, FJ, Abercrombie, DL, Abrantes, K, Acuña-Marrero, D, Afonso, AS, Afonso, P, Anders, D, Araujo, G, Arauz, R, Bach, P, Barnett, A, Bernal, D, Berumen, ML, Lion, SB, Bezerra, NPA, Blaison, AV, Block, BA, Bond, ME, Bonfil, R, Bradford, RW, Braun, CD, Brooks, EJ, Brooks, A, Brown, J, Bruce, BD, Byrne, ME, Campana, SE, Carlisle, AB, Chapman, DD, Chapple, TK, Chisholm, J, Clarke, CR, Clua, EG, Cochran, JEM, Crochelet, EC, Dagorn, L, Daly, R, Cortés, DD, Doyle, TK, Drew, M, Duffy, CAJ, Erikson, T, Espinoza, E, Ferreira, LC, Ferretti, F, Filmalter, JD, Fischer, GC, Fitzpatrick, R, Fontes, J, Forget, F, Fowler, M, Francis, MP, Gallagher, AJ, Gennari, E, Goldsworthy, SD, Gollock, MJ, Green, JR, Gustafson, JA, Guttridge, TL, Guzman, HM, Hammerschlag, N, Harman, L, Hazin, FHV, Heard, M, Hearn, AR, Holdsworth, JC, Holmes, BJ, Howey, LA, Hoyos, M, Hueter, RE, Hussey, NE, Huveneers, C, Irion, DT, Jacoby, DMP, Jewell, OJD, Johnson, R, Jordan, LKB, Joyce, W, Keating Daly, CA, Ketchum, JT, Klimley, AP, Kock, AA, Koen, P, Ladino, F, Lana, FO, Lea, JSE, Llewellyn, F, Lyon, WS, MacDonnell, A, Macena, BCL, Marshall, H, McAllister, JD, Queiroz, N, Humphries, NE, Couto, A, Vedor, M, da Costa, I, Sequeira, AMM, Mucientes, G, Santos, AM, Abascal, FJ, Abercrombie, DL, Abrantes, K, Acuña-Marrero, D, Afonso, AS, Afonso, P, Anders, D, Araujo, G, Arauz, R, Bach, P, Barnett, A, Bernal, D, Berumen, ML, Lion, SB, Bezerra, NPA, Blaison, AV, Block, BA, Bond, ME, Bonfil, R, Bradford, RW, Braun, CD, Brooks, EJ, Brooks, A, Brown, J, Bruce, BD, Byrne, ME, Campana, SE, Carlisle, AB, Chapman, DD, Chapple, TK, Chisholm, J, Clarke, CR, Clua, EG, Cochran, JEM, Crochelet, EC, Dagorn, L, Daly, R, Cortés, DD, Doyle, TK, Drew, M, Duffy, CAJ, Erikson, T, Espinoza, E, Ferreira, LC, Ferretti, F, Filmalter, JD, Fischer, GC, Fitzpatrick, R, Fontes, J, Forget, F, Fowler, M, Francis, MP, Gallagher, AJ, Gennari, E, Goldsworthy, SD, Gollock, MJ, Green, JR, Gustafson, JA, Guttridge, TL, Guzman, HM, Hammerschlag, N, Harman, L, Hazin, FHV, Heard, M, Hearn, AR, Holdsworth, JC, Holmes, BJ, Howey, LA, Hoyos, M, Hueter, RE, Hussey, NE, Huveneers, C, Irion, DT, Jacoby, DMP, Jewell, OJD, Johnson, R, Jordan, LKB, Joyce, W, Keating Daly, CA, Ketchum, JT, Klimley, AP, Kock, AA, Koen, P, Ladino, F, Lana, FO, Lea, JSE, Llewellyn, F, Lyon, WS, MacDonnell, A, Macena, BCL, Marshall, H, and McAllister, JD

Published
2021

3. Reply to: Shark mortality cannot be assessed by fishery overlap alone

Author

Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., Sims, D.W., Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., and Sims, D.W.

Published
2021

4. Reply to: Caution over the use of ecological big data for conservation

Author

Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F. H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguiluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., Sims, D.W., Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Lion, S.B., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F. H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Peñaherrera-Palma, C., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguiluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., and Sims, D.W.

Abstract

Our global analysis1 estimated the overlap and fishing exposure risk (FEI) using the space use of satellite-tracked sharks and longline fishing effort monitored by the automatic identification system (AIS)...

Published
2021

5. How many replicates to accurately estimate fish biodiversity using environmental DNA on coral reefs?

Author

Stauffer, S., Jucker, M., Keggin, T., Marques, V., Andrello, M., Bessudo, S., Cheutin, M.-C., Borrero-Pérez, G.H., Richards, E., Dejean, T., Hocdé, R., Juhel, J.-B., Ladino, F., Letessier, T.B., Loiseau, N., Maire, E., Mouillot, D., Mutis Martinezguerra, M., Manel, S., Polanco Fernández, A., Valentini, A., Velez, L., Albouy, C., Pellissier, L., Waldock, C., Stauffer, S., Jucker, M., Keggin, T., Marques, V., Andrello, M., Bessudo, S., Cheutin, M.-C., Borrero-Pérez, G.H., Richards, E., Dejean, T., Hocdé, R., Juhel, J.-B., Ladino, F., Letessier, T.B., Loiseau, N., Maire, E., Mouillot, D., Mutis Martinezguerra, M., Manel, S., Polanco Fernández, A., Valentini, A., Velez, L., Albouy, C., Pellissier, L., and Waldock, C.

Abstract

Quantifying fish species diversity in rich tropical marine environments remains challenging. Environmental DNA (eDNA) metabarcoding is a promising tool to face this challenge through the filtering, amplification, and sequencing of DNA traces from water samples. However, because eDNA concentration is low in marine environments, the reliability of eDNA to detect species diversity can be limited. Using an eDNA metabarcoding approach to identify fish Molecular Taxonomic Units (MOTUs) with a single 12S marker, we aimed to assess how the number of sampling replicates and filtered water volume affect biodiversity estimates. We used a paired sampling design of 30 L per replicate on 68 reef transects from 8 sites in 3 tropical regions. We quantified local and regional sampling variability by comparing MOTU richness, compositional turnover, and compositional nestedness. We found strong turnover of MOTUs between replicated pairs of samples undertaken in the same location, time, and conditions. Paired samples contained non-overlapping assemblages rather than subsets of one another. As a result, non-saturated localized diversity accumulation curves suggest that even 6 replicates (180 L) in the same location can underestimate local diversity (for an area <1 km). However, sampling regional diversity using ~25 replicates in variable locations (often covering 10 s of km) often saturated biodiversity accumulation curves. Our results demonstrate variability of diversity estimates possibly arising from heterogeneous distribution of eDNA in seawater, highly skewed frequencies of eDNA traces per MOTU, in addition to variability in eDNA processing. This high compositional variability has consequences for using eDNA to monitor temporal and spatial biodiversity changes in local assemblages. Avoiding false-negative detections in future biomonitoring efforts requires increasing replicates or sampled water volume to better inform management of marine biodiversity using eDNA.

Published
2021

6. Global spatial risk assessment of sharks under the footprint of fisheries

Author

Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Bessudo Lion, S., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Jorgensen, S.J., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., McAuley, R., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Patterson, T.A., Peñaherrera-Palma, C., Pepperell, J.G., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Stevens, J.D., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., Sims, D.W., Queiroz, N., Humphries, N.E., Couto, A., Vedor, M., da Costa, I., Sequeira, A.M.M., Mucientes, G., Santos, A.M., Abascal, F.J., Abercrombie, D.L., Abrantes, K., Acuña-Marrero, D., Afonso, A.S., Afonso, P., Anders, D., Araujo, G., Arauz, R., Bach, P., Barnett, A., Bernal, D., Berumen, M.L., Bessudo Lion, S., Bezerra, N.P.A., Blaison, A.V., Block, B.A., Bond, M.E., Bonfil, R., Bradford, R.W., Braun, C.D., Brooks, E.J., Brooks, A., Brown, J., Bruce, B.D., Byrne, M.E., Campana, S.E., Carlisle, A.B., Chapman, D.D., Chapple, T.K., Chisholm, J., Clarke, C.R., Clua, E.G., Cochran, J.E.M., Crochelet, E.C., Dagorn, L., Daly, R., Cortés, D.D., Doyle, T.K., Drew, M., Duffy, C.A.J., Erikson, T., Espinoza, E., Ferreira, L.C., Ferretti, F., Filmalter, J.D., Fischer, G.C., Fitzpatrick, R., Fontes, J., Forget, F., Fowler, M., Francis, M.P., Gallagher, A.J., Gennari, E., Goldsworthy, S.D., Gollock, M.J., Green, J.R., Gustafson, J.A., Guttridge, T.L., Guzman, H.M., Hammerschlag, N., Harman, L., Hazin, F.H.V., Heard, M., Hearn, A.R., Holdsworth, J.C., Holmes, B.J., Howey, L.A., Hoyos, M., Hueter, R.E., Hussey, N.E., Huveneers, C., Irion, D.T., Jacoby, D.M.P., Jewell, O.J.D., Johnson, R., Jordan, L.K.B., Jorgensen, S.J., Joyce, W., Keating Daly, C.A., Ketchum, J.T., Klimley, A.P., Kock, A.A., Koen, P., Ladino, F., Lana, F.O., Lea, J.S.E., Llewellyn, F., Lyon, W.S., MacDonnell, A., Macena, B.C.L., Marshall, H., McAllister, J.D., McAuley, R., Meÿer, M.A., Morris, J.J., Nelson, E.R., Papastamatiou, Y.P., Patterson, T.A., Peñaherrera-Palma, C., Pepperell, J.G., Pierce, S.J., Poisson, F., Quintero, L.M., Richardson, A.J., Rogers, P.J., Rohner, C.A., Rowat, D.R.L., Samoilys, M., Semmens, J.M., Sheaves, M., Shillinger, G., Shivji, M., Singh, S., Skomal, G.B., Smale, M.J., Snyders, L.B., Soler, G., Soria, M., Stehfest, K.M., Stevens, J.D., Thorrold, S.R., Tolotti, M.T., Towner, A., Travassos, P., Tyminski, J.P., Vandeperre, F., Vaudo, J.J., Watanabe, Y.Y., Weber, S.B., Wetherbee, B.M., White, T.D., Williams, S., Zárate, P.M., Harcourt, R., Hays, G.C., Meekan, M.G., Thums, M., Irigoien, X., Eguíluz, V.M., Duarte, C.M., Sousa, L.L., Simpson, S.J., Southall, E.J., and Sims, D.W.

Abstract

Brucellosis is a highly contagious zoonosis affecting humans and a wide range of domesticated and wild animal species. An important element for effective disease containment is to improve knowledge, attitudes and practices (KAP) of afflicted communities. This study aimed to assess the KAP related to brucellosis at the human–animal interface in an endemic area of Egypt and to identify the risk factors for human infection. A matched case–control study was conducted at the central fever hospitals located in six governorates in northern Egypt. Face‐to‐face interviews with cases and controls were conducted using a structured questionnaire. In total, 40.7% of the participants owned farm animals in their households. The overall mean practice score regarding animal husbandry, processing and consumption of milk and dairy products were significantly lower among cases compared with controls (−12.7 ± 18.1 vs. 0.68 ± 14.2, respectively; p < .001). Perceived barriers for notification of animal infection/abortion were predominate among cases and positively correlated with participants’ education. The predictors of having brucellosis infection were consumption of unpasteurized milk or raw dairy products and practicing animal husbandry. Applying protective measures against infection significantly reduced its risk. A model predicting risk factors for brucellosis among those who own animal showed that frequent abortions per animal increased the chance for brucellosis infection among human cases by 50‐fold (95% CI: 8.8–276.9), whereas the use of protective measures in animal care reduced the odds (OR = 0.11 [95% CI: 0.03–0.45]). In conclusion, consumption of unprocessed dairy products was equally important as contact with infected/aborted animals as major risk factors for Brucella spp. infection among humans in Egypt. There is poor knowledge, negative attitudes and risky behaviours among villagers which can perpetuate the risk of brucellosis transmission at the human–animal interface.

Published
2019

7. Genetic population dynamics of the critically endangered scalloped hammerhead shark ( Sphyrna lewini ) in the Eastern Tropical Pacific.

Author

Harned SP, Bernard AM, Salinas-de-León P, Mehlrose MR, Suarez J, Robles Y, Bessudo S, Ladino F, López Garo A, Zanella I, Feldheim KA, and Shivji MS

Abstract

The scalloped hammerhead shark, Sphyrna lewini , is a Critically Endangered, migratory species known for its tendency to form iconic and visually spectacular large aggregations. Herein, we investigated the population genetic dynamics of the scalloped hammerhead across much of its distribution in the Eastern Tropical Pacific (ETP), ranging from Costa Rica to Ecuador, focusing on young-of-year animals from putative coastal nursery areas and adult females from seasonal aggregations that form in the northern Galápagos Islands. Nuclear microsatellites and partial mitochondrial control region sequences showed little evidence of population structure suggesting that scalloped hammerheads in this ETP region comprise a single genetic stock. Galápagos aggregations of adults were not comprised of related individuals, suggesting that kinship does not play a role in the formation of the repeated, annual gatherings at these remote offshore locations. Despite high levels of fisheries exploitation of this species in the ETP, the adult scalloped hammerheads here showed greater genetic diversity compared with adult conspecifics from other parts of the species' global distribution. A phylogeographic analysis of available, globally sourced, mitochondrial control region sequence data ( n  = 1818 sequences) revealed that scalloped hammerheads comprise three distinct matrilines corresponding to the three major world ocean basins, highlighting the need for conservation of these evolutionarily unique lineages. This study provides the first view of the genetic properties of a scalloped hammerhead aggregation, and the largest sample size-based investigation of population structure and phylogeography of this species in the ETP to date., Competing Interests: The authors report no conflict of interest., (© 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)

Published
2022
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8. Global collision-risk hotspots of marine traffic and the world's largest fish, the whale shark.

Author

Womersley FC, Humphries NE, Queiroz N, Vedor M, da Costa I, Furtado M, Tyminski JP, Abrantes K, Araujo G, Bach SS, Barnett A, Berumen ML, Bessudo Lion S, Braun CD, Clingham E, Cochran JEM, de la Parra R, Diamant S, Dove ADM, Dudgeon CL, Erdmann MV, Espinoza E, Fitzpatrick R, Cano JG, Green JR, Guzman HM, Hardenstine R, Hasan A, Hazin FHV, Hearn AR, Hueter RE, Jaidah MY, Labaja J, Ladino F, Macena BCL, Morris JJ Jr, Norman BM, Peñaherrera-Palma C, Pierce SJ, Quintero LM, Ramírez-Macías D, Reynolds SD, Richardson AJ, Robinson DP, Rohner CA, Rowat DRL, Sheaves M, Shivji MS, Sianipar AB, Skomal GB, Soler G, Syakurachman I, Thorrold SR, Webb DH, Wetherbee BM, White TD, Clavelle T, Kroodsma DA, Thums M, Ferreira LC, Meekan MG, Arrowsmith LM, Lester EK, Meyers MM, Peel LR, Sequeira AMM, Eguíluz VM, Duarte CM, and Sims DW

Subjects
Animals, Endangered Species, Plankton, Ships, Sharks
Abstract

Marine traffic is increasing globally yet collisions with endangered megafauna such as whales, sea turtles, and planktivorous sharks go largely undetected or unreported. Collisions leading to mortality can have population-level consequences for endangered species. Hence, identifying simultaneous space use of megafauna and shipping throughout ranges may reveal as-yet-unknown spatial targets requiring conservation. However, global studies tracking megafauna and shipping occurrences are lacking. Here we combine satellite-tracked movements of the whale shark, Rhincodon typus, and vessel activity to show that 92% of sharks’ horizontal space use and nearly 50% of vertical space use overlap with persistent large vessel (>300 gross tons) traffic. Collision-risk estimates correlated with reported whale shark mortality from ship strikes, indicating higher mortality in areas with greatest overlap. Hotspots of potential collision risk were evident in all major oceans, predominantly from overlap with cargo and tanker vessels, and were concentrated in gulf regions, where dense traffic co-occurred with seasonal shark movements. Nearly a third of whale shark hotspots overlapped with the highest collision-risk areas, with the last known locations of tracked sharks coinciding with busier shipping routes more often than expected. Depth-recording tags provided evidence for sinking, likely dead, whale sharks, suggesting substantial “cryptic” lethal ship strikes are possible, which could explain why whale shark population declines continue despite international protection and low fishing-induced mortality. Mitigation measures to reduce ship-strike risk should be considered to conserve this species and other ocean giants that are likely experiencing similar impacts from growing global vessel traffic.

Published
2022
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9. Mercury concentrations and trophic relations in sharks of the Pacific Ocean of Colombia.

Author

Vélez N, Bessudo S, Barragán-Barrera DC, Ladino F, Bustamante P, and Luna-Acosta A

Subjects
Animals, Colombia, Conservation of Natural Resources, Fisheries, Humans, Pacific Ocean, Mercury analysis, Sharks
Abstract

Sharks are fished for human consumption in Colombia, and fins are exported illegally to international markets. The goal was to identify differences in total mercury (THg) concentrations in fins and muscles of shark species seized in the Buenaventura port (Colombian Pacific), and to assess potential human health risks related to shark consumption. Seven species were considered in this study: Pelagic Thresher (Alopias pelagicus), Pacific Smalltail Shark (Carcharhinus cerdale), Brown Smoothhound (Mustelus henlei), Sicklefin Smoothhound (Mustelus lunulatus), Scalloped Bonnethead (Sphyrna corona), Scalloped Hammerhead (Sphyrna lewini), and Bonnethead Shark (Sphyrna tiburo), and THg was analyzed in shark tissues. 24% muscle samples concentrations were above international recommended limits for human consumption, especially for A. pelagicus and S. lewini. Stable isotopes (δ 13 C and δ 15 N) analysis showed a foraging overlapping in coastal habitats, where overfishing usually occurs. This study provides useful scientific information to develop management plans for sharks in Colombia and neighboring countries., (Copyright © 2021 Elsevier Ltd. All rights reserved.)

Published
2021
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10. The elasmobranchs of Malpelo Flora and Fauna Sanctuary, Colombia.

Author

Bessudo S, Ladino F, Becerril-García EE, Shepard CM, Salinas-De-León P, and Hoyos-Padilla EM

Subjects
Animals, Colombia, Conservation of Natural Resources, Ecosystem, Sharks
Abstract

Management and conservation actions in marine-protected areas require baselines for monitoring threatened marine fauna such as elasmobranchs. This article provides evidence of the occurrence of 34 species of elasmobranchs (21 sharks and 13 batoids) in the Malpelo Flora and Fauna Sanctuary, Colombia, including five new records of sharks and three of rays. From 1987 to 2021, new records were obtained by underwater visual census using SCUBA, manned submersibles and deep-ocean cameras to depths of up to 2211 m. Of the recorded species, 21 are considered as threatened taxa (64%) by the IUCN, making the Malpelo Flora and Fauna Sanctuary an essential conservation area for this highly threatened group of species., (© 2021 Fisheries Society of the British Isles.)

Published
2021
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11. How many replicates to accurately estimate fish biodiversity using environmental DNA on coral reefs?

Author

Stauffer S, Jucker M, Keggin T, Marques V, Andrello M, Bessudo S, Cheutin MC, Borrero-Pérez GH, Richards E, Dejean T, Hocdé R, Juhel JB, Ladino F, Letessier TB, Loiseau N, Maire E, Mouillot D, Mutis Martinezguerra M, Manel S, Polanco Fernández A, Valentini A, Velez L, Albouy C, Pellissier L, and Waldock C

Abstract

Quantifying fish species diversity in rich tropical marine environments remains challenging. Environmental DNA (eDNA) metabarcoding is a promising tool to face this challenge through the filtering, amplification, and sequencing of DNA traces from water samples. However, because eDNA concentration is low in marine environments, the reliability of eDNA to detect species diversity can be limited. Using an eDNA metabarcoding approach to identify fish Molecular Taxonomic Units (MOTUs) with a single 12S marker, we aimed to assess how the number of sampling replicates and filtered water volume affect biodiversity estimates. We used a paired sampling design of 30 L per replicate on 68 reef transects from 8 sites in 3 tropical regions. We quantified local and regional sampling variability by comparing MOTU richness, compositional turnover, and compositional nestedness. We found strong turnover of MOTUs between replicated pairs of samples undertaken in the same location, time, and conditions. Paired samples contained non-overlapping assemblages rather than subsets of one another. As a result, non-saturated localized diversity accumulation curves suggest that even 6 replicates (180 L) in the same location can underestimate local diversity (for an area <1 km). However, sampling regional diversity using ~25 replicates in variable locations (often covering 10 s of km) often saturated biodiversity accumulation curves. Our results demonstrate variability of diversity estimates possibly arising from heterogeneous distribution of eDNA in seawater, highly skewed frequencies of eDNA traces per MOTU, in addition to variability in eDNA processing. This high compositional variability has consequences for using eDNA to monitor temporal and spatial biodiversity changes in local assemblages. Avoiding false-negative detections in future biomonitoring efforts requires increasing replicates or sampled water volume to better inform management of marine biodiversity using eDNA., Competing Interests: None declared., (© 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)

Published
2021
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12. Reply to: Caution over the use of ecological big data for conservation.

Author

Queiroz N, Humphries NE, Couto A, Vedor M, da Costa I, Sequeira AMM, Mucientes G, Santos AM, Abascal FJ, Abercrombie DL, Abrantes K, Acuña-Marrero D, Afonso AS, Afonso P, Anders D, Araujo G, Arauz R, Bach P, Barnett A, Bernal D, Berumen ML, Lion SB, Bezerra NPA, Blaison AV, Block BA, Bond ME, Bonfil R, Braun CD, Brooks EJ, Brooks A, Brown J, Byrne ME, Campana SE, Carlisle AB, Chapman DD, Chapple TK, Chisholm J, Clarke CR, Clua EG, Cochran JEM, Crochelet EC, Dagorn L, Daly R, Cortés DD, Doyle TK, Drew M, Duffy CAJ, Erikson T, Espinoza E, Ferreira LC, Ferretti F, Filmalter JD, Fischer GC, Fitzpatrick R, Fontes J, Forget F, Fowler M, Francis MP, Gallagher AJ, Gennari E, Goldsworthy SD, Gollock MJ, Green JR, Gustafson JA, Guttridge TL, Guzman HM, Hammerschlag N, Harman L, Hazin FHV, Heard M, Hearn AR, Holdsworth JC, Holmes BJ, Howey LA, Hoyos M, Hueter RE, Hussey NE, Huveneers C, Irion DT, Jacoby DMP, Jewell OJD, Johnson R, Jordan LKB, Joyce W, Keating Daly CA, Ketchum JT, Klimley AP, Kock AA, Koen P, Ladino F, Lana FO, Lea JSE, Llewellyn F, Lyon WS, MacDonnell A, Macena BCL, Marshall H, McAllister JD, Meÿer MA, Morris JJ, Nelson ER, Papastamatiou YP, Peñaherrera-Palma C, Pierce SJ, Poisson F, Quintero LM, Richardson AJ, Rogers PJ, Rohner CA, Rowat DRL, Samoilys M, Semmens JM, Sheaves M, Shillinger G, Shivji M, Singh S, Skomal GB, Smale MJ, Snyders LB, Soler G, Soria M, Stehfest KM, Thorrold SR, Tolotti MT, Towner A, Travassos P, Tyminski JP, Vandeperre F, Vaudo JJ, Watanabe YY, Weber SB, Wetherbee BM, White TD, Williams S, Zárate PM, Harcourt R, Hays GC, Meekan MG, Thums M, Irigoien X, Eguiluz VM, Duarte CM, Sousa LL, Simpson SJ, Southall EJ, and Sims DW

Subjects
Conservation of Natural Resources, Big Data, Ecology
Published
2021
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13. Reply to: Shark mortality cannot be assessed by fishery overlap alone.

Author

Queiroz N, Humphries NE, Couto A, Vedor M, da Costa I, Sequeira AMM, Mucientes G, Santos AM, Abascal FJ, Abercrombie DL, Abrantes K, Acuña-Marrero D, Afonso AS, Afonso P, Anders D, Araujo G, Arauz R, Bach P, Barnett A, Bernal D, Berumen ML, Lion SB, Bezerra NPA, Blaison AV, Block BA, Bond ME, Bonfil R, Bradford RW, Braun CD, Brooks EJ, Brooks A, Brown J, Bruce BD, Byrne ME, Campana SE, Carlisle AB, Chapman DD, Chapple TK, Chisholm J, Clarke CR, Clua EG, Cochran JEM, Crochelet EC, Dagorn L, Daly R, Cortés DD, Doyle TK, Drew M, Duffy CAJ, Erikson T, Espinoza E, Ferreira LC, Ferretti F, Filmalter JD, Fischer GC, Fitzpatrick R, Fontes J, Forget F, Fowler M, Francis MP, Gallagher AJ, Gennari E, Goldsworthy SD, Gollock MJ, Green JR, Gustafson JA, Guttridge TL, Guzman HM, Hammerschlag N, Harman L, Hazin FHV, Heard M, Hearn AR, Holdsworth JC, Holmes BJ, Howey LA, Hoyos M, Hueter RE, Hussey NE, Huveneers C, Irion DT, Jacoby DMP, Jewell OJD, Johnson R, Jordan LKB, Joyce W, Keating Daly CA, Ketchum JT, Klimley AP, Kock AA, Koen P, Ladino F, Lana FO, Lea JSE, Llewellyn F, Lyon WS, MacDonnell A, Macena BCL, Marshall H, McAllister JD, Meÿer MA, Morris JJ, Nelson ER, Papastamatiou YP, Peñaherrera-Palma C, Pierce SJ, Poisson F, Quintero LM, Richardson AJ, Rogers PJ, Rohner CA, Rowat DRL, Samoilys M, Semmens JM, Sheaves M, Shillinger G, Shivji M, Singh S, Skomal GB, Smale MJ, Snyders LB, Soler G, Soria M, Stehfest KM, Thorrold SR, Tolotti MT, Towner A, Travassos P, Tyminski JP, Vandeperre F, Vaudo JJ, Watanabe YY, Weber SB, Wetherbee BM, White TD, Williams S, Zárate PM, Harcourt R, Hays GC, Meekan MG, Thums M, Irigoien X, Eguiluz VM, Duarte CM, Sousa LL, Simpson SJ, Southall EJ, and Sims DW

Subjects
Animals, Conservation of Natural Resources, Seafood, Fisheries, Sharks
Published
2021
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14. Detection of the elusive Dwarf sperm whale ( Kogia sima ) using environmental DNA at Malpelo island (Eastern Pacific, Colombia).

Author

Juhel JB, Marques V, Polanco Fernández A, Borrero-Pérez GH, Mutis Martinezguerra M, Valentini A, Dejean T, Manel S, Loiseau N, Velez L, Hocdé R, Letessier TB, Richards E, Hadjadj F, Bessudo S, Ladino F, Albouy C, Mouillot D, and Pellissier L

Abstract

Monitoring large marine mammals is challenging due to their low abundances in general, an ability to move over large distances and wide geographical range sizes.The distribution of the pygmy ( Kogia breviceps ) and dwarf ( Kogia sima ) sperm whales is informed by relatively rare sightings, which does not permit accurate estimates of their distribution ranges. Hence, their conservation status has long remained Data Deficient (DD) in the Red list of the International Union for Conservation of Nature (IUCN), which prevent appropriate conservation measures.Environmental DNA (eDNA) metabarcoding uses DNA traces left by organisms in their environments to detect the presence of targeted taxon, and is here proved to be useful to increase our knowledge on the distribution of rare but emblematic megafauna.Retrieving eDNA from filtered surface water provides the first detection of the Dwarf sperm whale ( Kogia sima ) around the remote Malpelo island (Colombia).Environmental DNA collected during oceanic missions can generate better knowledge on rare but emblematic animals even in regions that are generally well sampled for other taxa., Competing Interests: The authors declare no competing interest., (© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)

Published
2021
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15. Global spatial risk assessment of sharks under the footprint of fisheries.

Author

Queiroz N, Humphries NE, Couto A, Vedor M, da Costa I, Sequeira AMM, Mucientes G, Santos AM, Abascal FJ, Abercrombie DL, Abrantes K, Acuña-Marrero D, Afonso AS, Afonso P, Anders D, Araujo G, Arauz R, Bach P, Barnett A, Bernal D, Berumen ML, Bessudo Lion S, Bezerra NPA, Blaison AV, Block BA, Bond ME, Bonfil R, Bradford RW, Braun CD, Brooks EJ, Brooks A, Brown J, Bruce BD, Byrne ME, Campana SE, Carlisle AB, Chapman DD, Chapple TK, Chisholm J, Clarke CR, Clua EG, Cochran JEM, Crochelet EC, Dagorn L, Daly R, Cortés DD, Doyle TK, Drew M, Duffy CAJ, Erikson T, Espinoza E, Ferreira LC, Ferretti F, Filmalter JD, Fischer GC, Fitzpatrick R, Fontes J, Forget F, Fowler M, Francis MP, Gallagher AJ, Gennari E, Goldsworthy SD, Gollock MJ, Green JR, Gustafson JA, Guttridge TL, Guzman HM, Hammerschlag N, Harman L, Hazin FHV, Heard M, Hearn AR, Holdsworth JC, Holmes BJ, Howey LA, Hoyos M, Hueter RE, Hussey NE, Huveneers C, Irion DT, Jacoby DMP, Jewell OJD, Johnson R, Jordan LKB, Jorgensen SJ, Joyce W, Keating Daly CA, Ketchum JT, Klimley AP, Kock AA, Koen P, Ladino F, Lana FO, Lea JSE, Llewellyn F, Lyon WS, MacDonnell A, Macena BCL, Marshall H, McAllister JD, McAuley R, Meÿer MA, Morris JJ, Nelson ER, Papastamatiou YP, Patterson TA, Peñaherrera-Palma C, Pepperell JG, Pierce SJ, Poisson F, Quintero LM, Richardson AJ, Rogers PJ, Rohner CA, Rowat DRL, Samoilys M, Semmens JM, Sheaves M, Shillinger G, Shivji M, Singh S, Skomal GB, Smale MJ, Snyders LB, Soler G, Soria M, Stehfest KM, Stevens JD, Thorrold SR, Tolotti MT, Towner A, Travassos P, Tyminski JP, Vandeperre F, Vaudo JJ, Watanabe YY, Weber SB, Wetherbee BM, White TD, Williams S, Zárate PM, Harcourt R, Hays GC, Meekan MG, Thums M, Irigoien X, Eguiluz VM, Duarte CM, Sousa LL, Simpson SJ, Southall EJ, and Sims DW

Subjects
Animals, Population Density, Risk Assessment, Sharks classification, Ships, Time Factors, Animal Migration, Fisheries statistics & numerical data, Geographic Mapping, Oceans and Seas, Sharks physiology, Spatio-Temporal Analysis
Abstract

Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fleets, that 24% of the mean monthly space used by sharks falls under the footprint of pelagic longline fisheries. Space-use hotspots of commercially valuable sharks and of internationally protected species had the highest overlap with longlines (up to 76% and 64%, respectively), and were also associated with significant increases in fishing effort. We conclude that pelagic sharks have limited spatial refuge from current levels of fishing effort in marine areas beyond national jurisdictions (the high seas). Our results demonstrate an urgent need for conservation and management measures at high-seas hotspots of shark space use, and highlight the potential of simultaneous satellite surveillance of megafauna and fishers as a tool for near-real-time, dynamic management.

Published
2019
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