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3. A glimmer of hope – ash genotypes with increased resistance to ash dieback pathogen show cross‐resistance to emerald ash borer

Author

Gossner, Martin M., primary, Perret‐Gentil, Anouchka, additional, Britt, Elisabeth, additional, Queloz, Valentin, additional, Glauser, Gaétan, additional, Ladd, Tim, additional, Roe, Amanda D., additional, Cleary, Michelle, additional, Liziniewicz, Mateusz, additional, Nielsen, Lene R., additional, Ghosh, Soumya K., additional, Bonello, Pierluigi, additional, and Eisenring, Michael, additional

Published
2023
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4. Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer

Author

Doonan, James, Kosawang, Chatchai, Eisenring, Michael, Ladd, Tim, Roe, Amanda D., Budde, Katharina B., Jørgensen, Hans Jørgen Lyngs, Queloz, Valentin, Nielsen, Lene Rostgaard, Gossner, Martin M., Doonan, James, Kosawang, Chatchai, Eisenring, Michael, Ladd, Tim, Roe, Amanda D., Budde, Katharina B., Jørgensen, Hans Jørgen Lyngs, Queloz, Valentin, Nielsen, Lene Rostgaard, and Gossner, Martin M.

Abstract

European ash, Fraxinus excelsior is facing the double threat of ongoing devastation by the invasive fungal pathogen, Hymenoscyphus fraxineus and the imminent arrival of the non-native emerald ash borer (EAB), Agrilus planipennis. The spread of EAB which is currently moving westwards from European Russia and Ukraine into central Europe, poses an additional substantial threat to European ash, F. excelsior. While the molecular basis for resistance or variation in resistance among European ash genotypes is heavily investigated, comparatively little is known about the molecular ash traits involved in resistance against EAB. In this study we have gathered transcriptomic data from EAB inoculated genotypes of F. excelsior that have previously shown different levels of susceptibility to EAB. Resultant datasets show differential gene expression in susceptible and resistant genotypes in response to EAB infestation. This data will provide important information on the molecular basis of resistance to the EAB and allow the development of management plans to combat a pending threat of a culturally and ecologically important European tree species.

Published
2023

5. A glimmer of hope - ash genotypes with increased resistance to ash dieback pathogen show cross-resistance to emerald ash borer

Author

Gossner, Martin M., Perret-Gentil, Anouchka, Britt, Elisabeth, Queloz, Valentin, Glauser, Gaétan, Ladd, Tim, Roe, Amanda D., Cleary, Michelle, Liziniewicz, Mateusz, Nielsen, Lene R., Ghosh, Soumya K., Bonello, Pierluigi, Eisenring, Michael, Gossner, Martin M., Perret-Gentil, Anouchka, Britt, Elisabeth, Queloz, Valentin, Glauser, Gaétan, Ladd, Tim, Roe, Amanda D., Cleary, Michelle, Liziniewicz, Mateusz, Nielsen, Lene R., Ghosh, Soumya K., Bonello, Pierluigi, and Eisenring, Michael

Abstract

Plants rely on cross-resistance traits to defend against multiple, phylogenetically distinct enemies. These traits are often the result of long co-evolutionary histories. Biological invasions can force naïve plants to cope with novel, coincident pests, and pathogens. For example, European ash (Fraxinus excelsior) is substantially threatened by the emerald ash borer (EAB), Agrilus planipennis, a wood-boring beetle, and the ash dieback (ADB) pathogen, Hymenoscyphus fraxineus. Yet, plant cross-resistance traits against novel enemies are poorly explored and it is unknown whether naïve ash trees can defend against novel enemy complexes via cross-resistance mechanisms. To gain mechanistic insights, we quantified EAB performance on grafted replicates of ash genotypes varying in ADB resistance and characterized ash phloem chemistry with targeted and untargeted metabolomics. Emerald ash borer performed better on ADB-susceptible than on ADB-resistant genotypes. Moreover, changes in EAB performance aligned with differences in phloem chemical profiles between ADB-susceptible and ADB-resistant genotypes. We show that intraspecific variation in phloem chemistry in European ash can confer increased cross-resistance to invasive antagonists from different taxonomic kingdoms. Our study suggests that promotion of ADB-resistant ash genotypes may simultaneously help to control the ADB disease and reduce EAB-caused ash losses, which may be critical for the long-term stability of this keystone tree species.

Published
2023

14. Impact of punctual mutations in the cap gene of Junonia coenia densovirus (JcDNV) on virus assembly and infectivity to Ld 652 cells and Spodoptera littoralis larvae

Author

Iatrou, Kostas, Couble, Pierre, Abd-Alla, A., Jousset, F-X., Cousserans, F., Bergoin, M., Abe, H., Fujii, T., Mita, K., Ajimura, M., Shimada, T., Sahara, K., Tamura, T., Altstein, M., Hariton, A., Davidovitch, M., Ben-Aziz, O., Barat-Houari, M., Hilliou, F., Jousset, F.-X., Sofer, L., Deleury, E., Rocher, J., Ravallec, M., Galibert, L., Feyereisen, R., Fournier, P., Volkoff, A-N., Baxter, Simon W., Chamberlain, Nicola, Papa, Riccardo, Humphray, Sean J., ffrench-Constant, Richard H., McMillan, W. Owen, Jiggins, Chris D., Behere, G.T., Russell, D., Batterham, P., Tay, W. T., Beldade, P., Rudd, S., Gruber, J.D., Long, A.D., Breugelmans, B., Simonet, G., de Velde, S. Van, Soest, S. Van, Smagghe, G., Broeck, J. Vanden, Clark, R., Brown, S., Heckel, D., Jiggins, C. D., Collins, S., Vogler, A. P, Chamberlain, N., Baxter, S., Jiggins, C., ffrench-Constant, R.H., Chortyk, O., Friz, J., Thompson, C., Kumar, P., Tice, C., Vertin, B., Palli, R., Kumar, M., Meyer, A., Meteyer, T., Smith, H., Cress, D., Li, B., Hormann, R., Collinge, Derek, Gordon, Karl, Behm, Carolyn, Whyard, Steve, Alençon, d', Audant, E., Bernard-Samain, P., Bidegainberry, S., Brehélin, V., Brun-Barale, M., Cousserans, A., Duvic, C., Escoubas, B., Feyereisen, J-M., Fournier, R., Gagneur, Ph., Gordon, C., Gimenez, K., Heckel, S., Hotelier, D., Hilliou, Th., Mita, F., Negre, K., Sabourault, V., Suraporn, C., Volkoff, S., Weissenbach, N., Maria, De Simone Anna, Angela, Sorrentino, Francesca, Di Cara, Polito, Lino, Anna, Digilio F., Drezen, J-M, Bezier, A., Lesobre, J., Huguet, E., Dupuy, C., Eleftherianos, I., Millichap, P. J., Felföldi, G., Gökcen, F., Waterfield, N., Clarke, D. J., ffrench-Constant, R. H., Reynolds, S. E., Elias, M., Joron, M., Willmott, K., Kaiser, V., Silva-Brandão, K. L., Freitas, A.V.L., Arias Mejía, C., Gomez Pineres, L.M., Brower, A.V.Z., Escoubas, J.-M., Girard, P.-A., Volkoff, N., Boublik, Y., D'Alençon, E., Taillez, P., Brehélin, M., Venekei, I., Fischer, H. M., Wheat, C. W., Wittstock, U., Heckel, D. G., Vogel, H., Freitak, D., Katsuma, S., Futahashi, R., Fujiwara, H., Garel, Annie, Briolay, Jérôme, Brouilly, Patrick, Royer, Corinne, Sasanuma, Shun-ichi, Sasanuma, Motoe, Keime, Céline, Gandrillon, Olivier, Chavancy, Gérard, Mita, Kasuei, Geber, M., Faye, I., Terenius, O., Goldsmith, M., Proestou, D., Carter, D., Nicholson, E., Wu, C., Zhang, H., Gopinathan, K. P., Parthasarathy, R., Dhawan, S., Gordon, K., Colebatch, G., Campbell, P.M., Horne, I., East, P.D., Hughes, T.M., Marcus, J.M., Serbielle, C., Douris, V., Lalmanach, G., Iatrou, K., Iga, Masatoshi, Sekimoto, Takayuki, Elmogy, Mohamed, Iwami, Masafumi, Sakurai, Sho, Jacquin-Joly, E., Merlin, C., Malpel, S., Pelletier, J., Brigaud, I., François, M-C., Maïbèche, M., Jarvis, D.L., Aumiller, J.J., Geisler, C., Hensley, J., Hollister, J.R., Shi, X., Jiggins, Chris D, Joron, Mathieu, Mallet, James, Jostova, P., Svatos, A., Pichova, Iva, Kadono-Okuda, K., Ito, K., Nohata, J., Yamamoto, K., Sasanuma, M., Sasanuma, S., Eguchi, R., Hara, W., Kiyokawa, I., Kobayashi, I., Uchino, K., Sezutsu, H., Kanda, T., Miura, T., Ohashi, T., Katayama, K., Kourti, A., Gkouvitsas, T., Kusakabe, T., Mon, H., Takahashi, M., Lee, J.M., Kawaguchi, Y., Labropoulou, V., Stefanou, D., Magkrioti, C., Andronopoulou, E., Swevers, L., Lapointe, R., Tanaka, K., Barney, W., Whitfield, J., Banks, J., Béliveau, C., Stoltz, D., Webb, B.A., Cusson, M., Lee, Siu Fai, Heckel, David G., Li, Yi, Guarino, Linda A., Li, Muwang, Li, Minhui, Guo, Qiuhong, Miao, Xuexia, Hou, Chengxiang, Lin, Hongxuan, Huang, Yongping, Li, Lan, Zheng, Sichun, Ladd, Tim, Zhang, Dayu, Buhlers, Deborah, Krell, Peter J., Arif, Basil M., Retnakaran, Arthur, Feng, Qili, Doucet, Daniel, Machado, Ednildo, Swevers, Luc, Makhijani, Kalpana, Bharathi, V, Kannan, Ramakrishnan, Shashidhara, L S, Mauchamp, Bernard, Jalabert, Audrey, Rocha, Martine Da, Grenier, Anne-Marie, Labas, Valérie, Vinh, Joëlle, Mita, Kazuei, Kadono-Okuda, Keiko, Miao, Yungen, Yue, Wanfu, Li, Xinghua, Wu, Xiaofeng, Miller, T.A., Park, Y., Ren, X., Kasahara, M., Sasaki, S., Nagayasu, Y., Yamada, T., Kanamori, H., Namiki, N., Kitagawa, M., Yamashita, H., Yasukochi, Y., Rvikumar, G., Shimomura, M., Nagamura, Y., Shin-I, T., Morishita, S., Sasaki, T., Sugahara, R., Monteiro, Antónia, Chen, Bin, Ramos, Diane, Kamal, Firdous, Glaser, Gary, Stockslager, Steven, Nieberding, C., Schneider, V., Vos, H. De, Lassance, J.M., Lofstedt, C., Brakefield, P.M., Nighorn, A., Papanicolaou, A., Blaxter, M.L., Jiggins, C.D., Papantonis, A., Sourmeli, S., Lecanidou, R., Rocha, M. Da, Royer, C., Pennacchio, F., Falabella, P., Varricchio, P., Malva, C., Pohl, Nelida, Sison-Mangus, Marilou, Briscoe, Adriana D., Saenko, S.V., Satish, V., Shukla, J.N., Nagaraju, J., Frank, Scholz, Tine, Lesch, Susann, Beez, Traute, Holthusen, Ines, Anderl, Geuenich, Silvia, Tina, Trenczek, Kojima, K., Niimi, T., Hatakeyama, M., Shiotsuki, Takahiro, Tan, An-Jiang, Tamura, Toshiki, Simpson, Robert, Newcomb, Richard, Beuning, Lesley, Yauk, Yah-Khing, Crowhurst, Ross, Gatehouse, Heather, Gatehouse, Laurence, Markwick, Ngaire, Chagne, Dave, Gleave, Andrew, Christeller, John, Strand, M. R., Soin, T., Loocke, K. Van, Wheelock, C., Harada, T., Akamatsu, M., Nakagawa, Y., Truman, JW, Hiruma, K, Allee, JP, MacWhinnie, SGB, Champlin, D, Riddiford, LM, Turnbull, M.W., Vitkova, M., Kubickova, S., Marec, F., Kroymann, J., Mithöfer, A., Boland, W., Vogt, R.G., Franco, M-d., Bohbot, J, Fernandez, K., Kobres, P., Hanna, J., Poppy, J., Webb, Bruce A., Gill, Torrence A., Fath-Goodin, Angelika, Kroemer, Jeremy, Wedde, M., Altincicek, B., Vilcinskas, A., Wee, Choon Wei, Robin, Charles, Heckel, David G, Wheat, Christopher W., Labandeira, Conrad, Andolfatto, P., Feng, Q., Simpson, R., Vogel, Heiko, Williams, A. K., Xia, Qingyou, Zhou, Zeyang, Lu, Cheng, Xiang, Zhonghuai, Zhang, Liang, Yamamoto, Kimiko, Narukawa, Junko, Nohata, Junko, Suetsugu, Yoshitaka, Minami, Hiroshi, Shimomura, Michihiko, Yukuhiro, K., Itoh, M., Banno, Y., Kômoto, N., Kosegawa, E., Hirokawa, M., Tatematsu, K., Nishimura, M., Maekawa, H., Kawanishi, Y., Nakajima, Y., and Krell, Peter J

Subjects
Article
Published
2007

33. Host-range testing of a mixture of two nucleopolyhedroviruses of Choristoneura fumiferana(Lepidoptera: Tortricidae)

Author

Kaupp, William J., Barber, Kevin N., Fick, William E., Ebling, Peter M., Ladd, Tim R., and Holmes, Stephen B.

Abstract

AbstractThe host range of a mixture of Choristoneura fumiferana(Clemens) nucleopolyhedroviruses (CfMNPV and CfDefNPV) was investigated using a per osbioassay of larvae of 29 species of Lepidoptera and adult males of Megachile rotundata(F.) (Hymenoptera: Megachilidae). Using a whole-genomic DNA probe, positive results were obtained in 8 of 10 Tortricidae: Archips cerasivorana(Fitch), Choristoneura fractivittana(Clemens), C. fumiferana, Choristoneura occidentalisFreeman, Choristoneura pinus pinusFreeman, Choristoneura rosaceana(Harris), Clepsis persicana(Fitch), and Cydia pomonella(L.); one Crambidae: Ostrinia nubilalis(H?bner); one arctiine Erebidae: Estigmene acrea(Drury); and two Noctuidae: Oligia illocata(Walker) and Pyrrhia exprimens(Walker). Mortality rates were highest among C. fumiferana, C. occidentalis, C. pinus pinus, A. cerasivorana, and C. pomonella. Sequenced polymerase chain reaction (PCR) amplicons from infected individuals from several species confirmed that the primer sets amplified the target viruses. CfMNPV was consistently found in virus-fed C. fumiferana; whereas, CfDefNPV was present only occasionally. The presence of CfMNPV and CfDefNPV in A. cerasivoranawas confirmed by PCR and DNA sequencing. Significant treatment-mortality rates were induced in the noctuids P. exprimensand Acronicta impletaWalker; PCR determined that both viruses were present in treated P. exprimensbut only CfMNPV was present in A. impleta. No virus was detected in M. rotundata.

Published
2011
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35. The <TOGGLE>ultraspiracle</TOGGLE> gene of the Spruce Budworm, <TOGGLE>Choristoneura fumiferana:</TOGGLE> Cloning of cDNA and developmental expression of mRNA<FNR HREF="fn1"></FNR><FN ID="fn1">The gene bank accession number for the sequence presented is AF016368.</FN>

Author

Perera, Srini C., Palli, Subba R., Ladd, Tim R., Krell, Peter J., and Retnakaran, Arthur

Abstract

Cloning and characterization of a Choristoneura fumiferana ultraspiracle (Cfusp) cDNA are described. First, a PCR fragment and then a cDNA clone (4.4 kb) were isolated from spruce budworm cDNA libraries. Comparison of the deduced amino acid sequence of this cDNA with the sequences in Genbank showed that this sequence had high homology with the ultraspiracle cDNAs cloned from Drosophila melanogaster (Dmusp), Bombyx mori (Bmusp), Manduca sexta (Msusp), and Aedes aegypti (Aausp). The Cfusp cDNA contained all the regions that are typical for a steroid/thyroid hormone receptor superfamily member. The DNA binding domain or C region was the most conserved sequence among all the usps. The A/B, D, and E regions also showed high amino acid identity with the amino acid sequences of Dmusp, Msusp, Bmusp, and Aausp. The Cfusp 4.5-kb mRNA was present in the embryos, in all larval stages, and in the pupae. The Cfusp mRNA levels in the midgut increased during the sixth-instar larval development and reached peak levels during the ecdysteroid raises for the pupal molt. However, Cfusp mRNA levels remained unchanged in the midgut of fifth-instar larvae, and in the epidermis and fat body of sixth-instar larvae indicating both a tissue- and stage-specific regulation of Cfusp mRNA expression. Dev. Genet. 22:169–179, 1998. © 1998 Wiley-Liss, Inc.

Published
1998
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36. Cloning and characterization of a protein kinase C gene from the spruce budworm, Choristoneura fumiferana

Author

Quan, Guo-Xing, Doucet, Daniel, Ladd, Tim, Krell, Peter J., and Arif, Basil M.

Subjects
*PROTEIN kinase C, *GENE expression, *RNA, *INTERFERON inducers
Abstract

Abstract: Recent studies have implicated protein kinase C (PKC) in the control of 20-hydroxyecdysone (20E)-dependent gene expression during molting and metamorphosis in insects. To further understand the role of this kinase in 20E signal transduction, we cloned a homolog of mammalian PKC by RT-PCR and 5′/3′-RACE from adult of the moth Choristoneura fumiferana. The full-length cDNA of the C. fumiferana PKC (CfPKC1) is 2.3kb with an open reading frame encoding a protein of 669 amino acids. The deduced amino acid sequence contains all the characteristic features of the classical protein kinase C subfamily. Northern and Western blot analysis showed that CfPKC1 was distributed ubiquitously in various tissues and at different developmental stages. Activation of CfPKC1 with the PKC activator phorbol 12-myristate 13-acetate (PMA) resulted in a rapid redistribution of the protein from the cytosol to the plasma membrane. Knock-down of the CfPKC1 gene by double-stranded RNA interference or treatment of the CF-203 cells with PKC-specific inhibitors reduces the expression of the 20E-responsive genes CHR3 and E75. This data suggests that CfPKC1 is involved in the 20E-response gene expression in C. fumiferana. [Copyright &y& Elsevier]

Published
2008
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37. Development of SCAR markers for the DNA-based detection of the Asian long-horned beetle, Anoplophora glabripennis (Motschulsky).

Author

Kethidi DR, Roden DB, Ladd TR, Krell PJ, Retnakaran A, and Feng Q

Subjects
Animals, Blotting, Southern, Coleoptera growth & development, DNA genetics, DNA Primers, Genetic Markers, Polymorphism, Genetic, Sensitivity and Specificity, Coleoptera genetics, DNA analysis, Genes, Insect, Random Amplified Polymorphic DNA Technique methods
Abstract

DNA markers were identified for the molecular detection of the Asian long-horned beetle (ALB), Anoplophora glabripennis (Mot.), based on sequence characterized amplified regions (SCARs) derived from random amplified polymorphic DNA (RAPD) fragments. A 2,740-bp DNA fragment that was present only in ALB and not in other Cerambycids was identified after screening 230 random primers in a PCR-based assay system. Three pairs of nested 22-mer oligonucleotide primers were designed on the basis of the sequence of this fragment and were used to perform diagnostic PCR. The first pair of primers (SCAR1) amplified a single 745-bp fragment of ALB DNA, but this did not differentiate ALB from other species. The other two pairs of SCAR primers (SCAR2 and SCAR3) amplified bands of 1,237- and 2,720-bp, respectively, that were capable of differentiating ALB from other closely related non-native and native Cerambycids, such as A. chinensis (Forster), A. malasiaca (Thomson), A. nobilis (Ganglbauer), Monochamus scutellatus (Say), Plectrodera scalator (Fab), Saperda tridentata (Olivier), and Graphisurus fasciatus (Degeer). The latter two SCAR markers could be amplified using DNA extracted from body parts of ALB such as the wing, the leg, and the antennae as well as tissues from all the developmental stages including the egg, larva, pupa, and adult. These markers were also capable of identifying ALB using the DNA extracted from frass. Our results demonstrate that the SCAR markers we have identified can be used for unambiguously identifying ALB from other closely related Cerambycids using a simple PCR procedure., (Copyright 2003 Wiley-Liss, Inc.)

Published
2003
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