1. Analysis of the nucleotide sequence of 53 kbp from the right terminus of the genome of variola major virus strain India-1967
- Author
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S.N. Shchelkunov, V.M. Blinov, S.M. Resenchuk, A.V. Totmenin, L.V. Olenina, G.B. Chirikova, and L.S. Sandakhchiev
- Subjects
Cancer Research ,Membrane Glycoproteins ,Serine Proteinase Inhibitors ,Genes, Viral ,Sequence Homology, Amino Acid ,Molecular Sequence Data ,Restriction Mapping ,Vaccinia virus ,Genome, Viral ,Sequence Analysis, DNA ,Variola virus ,Rats ,Mice ,Open Reading Frames ,Viral Proteins ,Infectious Diseases ,Virology ,DNA, Viral ,Animals ,Humans ,Amino Acid Sequence ,Receptors, Cytokine - Abstract
Sequencing and computer analysis of a variola major virus strain India-1967 (VAR-IND) genome segment (53,018 bp) from the right terminal region has been carried out. Fifty-nine potential open reading frames (ORFs) of over 60 amino acid residues were identified. Structure-function organization of the VAR-IND DNA segment was compared with the previously reported sequences from the analogous genomic regions of vaccinia virus strains Copenhagen (VAC-COP) and Western Reserve (VAC-WR) and variola virus strain Harvey (VAR-HAR). Multiple differences between VAR-IND and the strains of VAC but the high identity of VAR-IND with VAR-HAR in the genetic maps are revealed. Possible functions of the predicted viral proteins and the effect of their differences on the features of orthopoxviruses are discussed.
- Published
- 1994