11 results on '"L., Caliari"'
Search Results
2. Abstract 1818: ZEB1 expression is associated with the PTEN loss and TMPRSS2 ERG fusion immune evasion phenotype in prostate cancer
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Fabiano Pinto Saggioro, Camila Maria de Melo, Luiz Artur Poletto Chaves, Jeremy A. Squire, and Andre L. Caliari
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Cancer Research ,Tumor microenvironment ,biology ,Cancer ,medicine.disease ,TMPRSS2 ,Prostate cancer ,Immune system ,Oncology ,biology.protein ,Cancer research ,medicine ,PTEN ,Erg ,CD8 - Abstract
Prostate cancer (PCa) is considered immunologically cold with a tumor microenvironment (TME) that evades effective immune responses. PTEN loss and TMPRSS2-ERG fusion are common somatic mutations in PCa and both alterations have recently been suggested to impact TME immune infiltration. Interestingly, both mutations are considered to play a role in epithelial to mesenchymal transition (EMT). ZEB1, a stemness and EMT driver has also been associated with immune evasion in different types of tumors. In this study, we investigated the role of ZEB1 in the immune TME of prostate cancer and the putative cooperation between ZEB1 expression, PTEN loss and TMPRSS2-ERG fusion. Immunohistochemistry for PTEN, ERG and ZEB1 were analyzed in 43 PCa cases collected after radical prostatectomy, correlation analysis of expression and immune cell abundance prediction were accessed using PCa expression data from TCGA (n=494). Correlation analysis between ZEB1 expression and 395 genes involved in immune response showed a positive correlation with ERG (r=0.1941, P Citation Format: Luiz P. Chaves, Andre L. Caliari, Camila M. Melo, Fabiano P. Saggioro, Jeremy A. Squire. ZEB1 expression is associated with the PTEN loss and TMPRSS2 ERG fusion immune evasion phenotype in prostate cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2021; 2021 Apr 10-15 and May 17-21. Philadelphia (PA): AACR; Cancer Res 2021;81(13_Suppl):Abstract nr 1818.
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- 2021
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3. Effects of Drilling Slurry on the Side Shear of Drilled Shafts over Time
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L. Caliari de Lima, G. Mullins, and W. Allen
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Shear (geology) ,Slurry ,Drilling ,Geotechnical engineering ,Geology - Published
- 2018
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4. Effects of Drilling Slurry on the Side Shear of Drilled Shafts over Time
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de Lima, L. Caliari, primary, Allen, W., additional, and Mullins, G., additional
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- 2018
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5. Risk of Unplanned Hospitalization During Treatment With Concomitant Chemoradiation Therapy
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J.K. Elson, Andrew Evans, Ronald D. Ennis, L. Caliari, and Daniel Becker
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Cancer Research ,medicine.medical_specialty ,Radiation ,Oncology ,business.industry ,Internal medicine ,Concomitant ,medicine ,Radiology, Nuclear Medicine and imaging ,business - Published
- 2013
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6. Photoemission investigation on the oxidation of Si(111)Ag interfaces and its relation to the interface structure
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I. Abbati, L. Caliari, W. E. Spicer, Giorgio Rossi, I. Lindau, and Lucio Braicovich
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Materials science ,Analytical chemistry ,Oxide ,chemistry.chemical_element ,Synchrotron radiation ,Surfaces and Interfaces ,engineering.material ,Condensed Matter Physics ,Oxygen ,Surfaces, Coatings and Films ,Crystallography ,chemistry.chemical_compound ,Adsorption ,chemistry ,Phase (matter) ,Monolayer ,Materials Chemistry ,engineering ,Reactivity (chemistry) ,Noble metal - Abstract
We give the first photoemission results on the enhancement of Si reactivity to oxygen when a noble metal (Ag) is present. The tunability of synchrotron radiation (SR) has been used to get high surface sensitivity and to take advantage of cross section energy dependence. We show that when one monolayer of Ag is deposited onto Si(111), the exposure to oxygen (30 × 106L) originates the overgrowth of an oxide phase which is basically SiO2. This indicates that Ag breaks the sp3 configuration of Si atoms with a consequent dramatic increase in the Si reactivity. This behaviour rules out the model of Ag adsorbed on top of Si with an atomically abrupt interface.
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- 1982
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7. Pathway-based analysis of primary biliary cirrhosis genome-wide association studies
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Kar, Sp, Seldin, Mf, Chen, W, Lu, E, Hirschfield, Gm, Invernizzi, P, Heathcote, J, Cusi, D, Almasio, Pl, Alvaro, D, Andreone, P, Andriulli, A, Barlassina, C, Benedetti, A, Bernuzzi, F, Bianchi, I, Bragazzi, M, Brunetto, M, Bruno, S, Caliari, L, Casella, G, Coco, B, Colli, A, Colombo, M, Colombo, S, Cursaro, C, Croce, Ls, Crosignani, A, Donato, F, Elia, G, Fabris, L, Floreani, A, Galli, A, Grattagliano, I, Lazzari, R, Lleo, A, Macaluso, F, Marra, F, Marzioni, M, Mascia, E, Mattalia, A, Montanari, R, Morini, L, Morisco, F, Muratori, L, Muratori, P, Niro, G, Picciotto, A, Podda, M, Portincasa, P, Prati, D, Raggi, C, Rosina, F, Rossi, S, Sogno, I, Spinzi, G, Strazzabosco, M, Tarallo, Sonia, Tarocchi, M, Tiribelli, C, Toniutto, P, Vinci, M, Zuin, M, Gershwin, Me, Siminovitch, Ka, Amos, Ci, Tarallo, S, Zuin, M., S. P., Kar, M. F., Seldin, W., Chen, E., Lu, G. M., Hirschfield, P., Invernizzi, J., Heathcote, D., Cusi, t. I., Pbc, P. L., Almasio, D., Alvaro, P., Andreone, A., Andriulli, C., Barlassina, A., Benedetti, F., Bernuzzi, I., Bianchi, M., Bragazzi, M., Brunetto, S., Bruno, L., Caliari, G., Casella, B., Coco, A., Colli, M., Colombo, S., Colombo, C., Cursaro, Croce', Saveria, A., Crosignani, F., Donato, G., Elia, L., Fabri, A., Floreani, A., Galli, I., Grattagliano, R., Lazzari, A., Lleo, F., Macaluso, F., Marra, M., Marzioni, E., Mascia, A., Mattalia, R., Montanari, L., Morini, F., Morisco, L., Muratori, P., Muratori, G., Niro, A., Picciotto, M., Podda, P., Portincasa, D., Prati, C., Raggi, F., Rosina, S., Rossi, I., Sogno, G., Spinzi, M., Strazzabosco, S., Tarallo, M., Tarocchi, Tiribelli, Claudio, P., Toniutto, M., Vinci, M., Zuin, M. E., Gershwin, K. A., Siminovitch, C. I., Amos, SP Kar, MF Seldin, W Chen, E Lu, GM Hirschfield, P Invernizzi, J Heathcote, D Cusi, the Italian PBC Genetics Study Group [.., P Andreone, L Muratori, P Muratori, ], ME Gershwin, KA Siminovitch, CI Amos, Kar, S, Seldin, M, Chen, W, Lu, E, Hirschfield, G, Invernizzi, P, Heathcote, J, Cusi, D, the Italian PBC Genetics Study, G, Almasio, P, Alvaro, D, Andreone, P, Andriulli, A, Barlassina, C, Benedetti, A, Bernuzzi, F, Bianchi, I, Bragazzi, M, Brunetto, M, Bruno, S, Caliari, L, Casella, G, Coco, B, Colli, A, Colombo, M, Colombo, S, Cursaro, C, Croce, L, Crosignani, A, Donato, F, Elia, G, Fabris, L, Floreani, A, Galli, A, Grattagliano, I, Lazzari, R, Lleo, A, Macaluso, F, Marra, F, Marzioni, M, Mascia, E, Mattalia, A, Montanari, R, Morini, L, Morisco, F, Muratori, L, Muratori, P, Niro, G., P, A, Podda, M, Portincasa, P, Prati, D, Raggi, C, Rosina, F, Rossi, S, Sogno, I, Spinzi, G, Strazzabosco, M, Tarallo, S, Tarocchi, M, Tiribelli, C, Toniutto, P, Vinci, M, Zuin, M, Gershwin, M, Siminovitch, K, Amos, C, Kar, Sp, Seldin, Mf, Hirschfield, Gm, Almasio, Pl, Morisco, Filomena, Niro, G, Picciotto, A, Gershwin, Me, Siminovitch, Ka, Amos, Ci, and the Italian PBC Genetics Study, Group
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Male ,Linkage disequilibrium ,PRIMARY BILIARY CIRRHOSIS ,Genome-wide association study ,VARIANTS ,Linkage Disequilibrium ,Cohort Studies ,ACTIVATION ,Primary biliary cirrhosis ,Gene Frequency ,MED/12 - GASTROENTEROLOGIA ,Databases, Genetic ,SENSORS ,Genetics (clinical) ,Genetics ,Liver Cirrhosis, Biliary ,Middle Aged ,EPITHELIAL-MESENCHYMAL TRANSITION ,hedgehog signaling ,Hedgehog signaling pathway ,Algorithm ,Italy ,DISEASES ,Female ,Algorithms ,TRAITS ,Human ,Signal Transduction ,Canada ,Genotype ,Immunology ,EPITHELIAL-MESENCHYMAL TRANSITION, CELLS, ACTIVATION, GENE, IDENTIFICATION, RESPONSES, VARIANTS, DISEASES, SENSORS, TRAITS ,autoimmune disease ,Biology ,Polymorphism, Single Nucleotide ,linear combination test ,Article ,Autoimmune Diseases ,Meta-Analysis as Topic ,medicine ,Humans ,Genetic Predisposition to Disease ,phosphatidylinositol signaling ,KEGG ,Allele frequency ,Genetic association ,IDENTIFICATION ,medicine.disease ,GENE ,Multiple comparisons problem ,PBC, genome wide association ,CELLS ,Cohort Studie ,Genome-Wide Association Study ,RESPONSES - Abstract
Genome-wide association studies (GWAS) have successfully identified several loci associated with primary biliary cirrhosis (PBC) risk. Pathway analysis complements conventional GWAS analysis. We applied the recently developed linear combination test for pathways to datasets drawn from independent PBC GWAS in Italian and Canadian subjects. Of the Kyoto Encyclopedia of Genes and Genomes and BioCarta pathways tested, 25 pathways in the Italian dataset (449 cases, 940 controls) and 26 pathways in the Canadian dataset (530 cases, 398 controls) were associated with PBC susceptibility (P
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- 2013
8. Y chromosome loss in male patients with primary biliary cirrhosis.
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Lleo A, Oertelt-Prigione S, Bianchi I, Caliari L, Finelli P, Miozzo M, Lazzari R, Floreani A, Donato F, Colombo M, Gershwin ME, Podda M, and Invernizzi P
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- Adult, Age Factors, Aged, Aged, 80 and over, Aging genetics, Aging immunology, Autoantibodies immunology, Autoimmune Diseases genetics, Autoimmune Diseases immunology, Chromosomes, Human, X genetics, Female, Haploinsufficiency genetics, Haploinsufficiency immunology, Humans, In Situ Hybridization, Fluorescence, Male, Middle Aged, Sex Factors, Chromosomes, Human, Y genetics, Liver Cirrhosis, Biliary genetics, Liver Cirrhosis, Biliary immunology, Sex Chromosome Aberrations
- Abstract
Sex chromosome abnormalities have been advocated to be involved in the striking female prevalence of primary biliary cirrhosis (PBC) and women with PBC manifest an increased X chromosome loss in peripheral blood mononuclear cells compared to age-matched healthy women. Our knowledge of the etiopathogenesis of autoimmunity in male patients remains, however, limited. Next to the possible role of androgens and their imbalances, the Y chromosome appears as a potential candidate for influence of the immune function in men. Herein we analyzed a population of male patients with primary biliary cirrhosis (n = 26) and healthy controls (n = 88) to define a potential association of disease and the loss of the Y chromosome. We demonstrate that Y chromosome loss indeed is higher in PBC males compared to healthy controls, and this phenomenon increases with aging. We were, thus, able to confirm the existence of an analogous mechanism in the male population to previously identified X haploinsufficiency in female patients with organ-specific autoimmune disease. We propose that this commonality might represent a relevant feature in the etiopathogenesis of autoimmune diseases that should be further investigated., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
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- 2013
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9. The X-factor in primary biliary cirrhosis: monosomy X and xenobiotics.
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Bianchi I, Lleo A, Bernuzzi F, Caliari L, Smyk DS, and Invernizzi P
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Primary biliary cirrhosis (PBC) is a chronic, cholestatic, autoimmune liver disease characterised by the destruction of small- and medium-sized bile ducts. The serological hallmark of PBC includes antimitochondrial antibodies (AMA). The disease has a striking female predominance, and primarily affects women of middle-age. First-degree relatives, and in particular female relatives, are known to have an increased risk of developing the disease. Several studies have attempted to explain the female predominance of PBC, and autoimmune diseases in general. Two components that are of interest in PBC include monosomy X and xenobiotics. Monosomy X has been noted to be prevalent in the peripheral blood mononuclear cells of PBC patients. Xenobiotics, which are exogenous chemicals not normally found within the body, have been implicated in the modification of, and loss of, tolerance to AMA. Several cosmetics are known to contain these xenobiotics, which is of interest given the information provided in regards to known risk factors for PBC development. This review will focus on X monosomy and xenobiotics, which appear to constitute the X-factor of PBC.
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- 2012
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10. Autoimmunity and Turner's syndrome.
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Lleo A, Moroni L, Caliari L, and Invernizzi P
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- Autoantibodies genetics, Autoantibodies immunology, Autoimmune Diseases immunology, Autoimmunity genetics, Autoimmunity immunology, Chromosomes, Human, X genetics, Chromosomes, Human, Y genetics, Female, Humans, Immunologic Factors genetics, Immunologic Factors immunology, Autoimmune Diseases genetics, Major Histocompatibility Complex genetics, Turner Syndrome genetics, Turner Syndrome immunology
- Abstract
Turner Syndrome (TS) is a common genetic disorder, affecting female individuals, resulting from the partial or complete absence of one sex chromosome, and occurring in approximately 50 per 100,000 liveborn girls. TS is associated with reduced adult height and with gonadal dysgenesis, leading to insufficient circulating levels of female sex steroids and to infertility. Morbidity and mortality are increased in TS but average intellectual performance is within the normal range. TS is closely associated to the presence of autoantibodies and autoimmune diseases (AID), especially autoimmune thyroiditis and inflammatory bowel disease. Despite the fact that the strong association between TS and AID is well known and has been widely studied, the underlying immunopathogenic mechanism remains partially unexplained. Recent studies have displayed how TS patients do not show an excess of immunogenic risk markers. This is evocative for a higher responsibility of X-chromosome abnormalities in the development of AID, and particularly of X-genes involved in immune response. For instance, the long arm of the X chromosome hosts a MHC-locus, so the loss of that region may lead to a deficiency in immune regulation. Currently no firm guidelines for diagnosis exist. In conclusion, TS is a condition associated with a number of autoimmune manifestations. Individuals with TS need life-long medical attention. As a consequence of these findings, early diagnosis and regular screening for potential associated autoimmune conditions are essential in the medical follow-up of TS patients., (Copyright © 2011 Elsevier B.V. All rights reserved.)
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- 2012
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11. TNF-alpha polymorphisms in primary biliary cirrhosis: a northern and southern Italian experience.
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Niro GA, Poli F, Andriulli A, Bianchi I, Bernuzzi F, Caliari L, Fontana R, Gioffreda D, Valvano MR, Podda M, and Invernizzi P
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- Adult, Aged, Alleles, Disease Progression, Female, Gene Frequency, Genotype, Geography, HLA-DRB1 Chains, Humans, Italy, Liver Cirrhosis, Biliary pathology, Male, Middle Aged, Polymerase Chain Reaction, Promoter Regions, Genetic genetics, HLA-DR Antigens genetics, Liver Cirrhosis, Biliary genetics, Polymorphism, Genetic, Tumor Necrosis Factor-alpha genetics
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Specific HLA alleles and immunoregulatory genes have been evaluated in primary biliary cirrhosis (PBC), but data are discordant. We determined whether TNF-alpha promoter polymorphisms (G-308A and G-238A) and alleles of HLA class II (HLA-DRB1) might be associated either with PBC occurrence and severity in Italian populations from two distinct areas. The distribution of TNF1 (G/G) genotype did not differ either between patients and controls or between patients from Northern and Southern Italy. Contrariwise, the HLA-DRB1*08 appeared positively linked to the occurrence of disease (8.4% in patients vs. 2.5% in controls, P = 0.003), whereas the HLA-DRB1*13 appeared to be protective, being more frequent in controls (12.8%) than in patients (7%) (P = 0.038). Neither positively nor negatively associated alleles of the two genomic loci had an effect on disease progression. We report a distinct genetic risk of developing PBC in the Italian population, with no interaction between the HLA and TNF alleles.
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- 2009
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