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1. Comparison of uridine and N1-methylpseudouridine mRNA platforms in development of an Andes virus vaccine

Author

Kuzmin, Ivan V., Soto Acosta, Ruben, Pruitt, Layne, Wasdin, Perry T., Kedarinath, Kritika, Hernandez, Keziah R., Gonzales, Kristyn A., Hill, Kharighan, Weidner, Nicole G., Mire, Chad, Engdahl, Taylor B., Moon, Woohyun J., Popov, Vsevolod, Crowe, Jr, James E., Georgiev, Ivelin S., Garcia-Blanco, Mariano A., Abbott, Robert K., and Bukreyev, Alexander

Published
2024
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3. Species-Specific Evolution of Ebola Virus during Replication in Human and Bat Cells

Author

Whitfield, Zachary J, Prasad, Abhishek N, Ronk, Adam J, Kuzmin, Ivan V, Ilinykh, Philipp A, Andino, Raul, and Bukreyev, Alexander

Subjects
Vaccine Related, Genetics, Infectious Diseases, Biodefense, Prevention, Rare Diseases, Emerging Infectious Diseases, Aetiology, 2.1 Biological and endogenous factors, Infection, Good Health and Well Being, Animals, Chiroptera, Ebolavirus, Hemorrhagic Fever, Ebola, Humans, Virus Replication, ADAR, Ebola virus, bats, emerging viruses, evolution, filovirus, population genetics, reservoir biology, viral evolution, Biochemistry and Cell Biology, Medical Physiology
Abstract

Ebola virus (EBOV) causes a severe, often fatal disease in humans and nonhuman primates. Within the past decade, EBOV has caused two large and difficult-to-control outbreaks, one of which recently ended in the Democratic Republic of the Congo. Bats are the likely reservoir of EBOV, but little is known of their relationship with the virus. We perform serial passages of EBOV in human and bat cells and use circular sequencing to compare the short-term evolution of the virus. Virus populations passaged in bat cells have sequence markers indicative of host RNA editing enzyme activity, including evidence for ADAR editing of the EBOV glycoprotein. Multiple regions in the EBOV genome appear to have undergone adaptive evolution when passaged in bat and human cells. Individual mutated viruses are rescued and characterized. Our results provide insight into the host species-specific evolution of EBOV and highlight the adaptive flexibility of the virus.

Published
2020

4. 2022 taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Author

Kuhn, Jens H., Adkins, Scott, Alkhovsky, Sergey V., Avšič-Županc, Tatjana, Ayllón, María A., Bahl, Justin, Balkema-Buschmann, Anne, Ballinger, Matthew J., Bandte, Martina, Beer, Martin, Bejerman, Nicolas, Bergeron, Éric, Biedenkopf, Nadine, Bigarré, Laurent, Blair, Carol D., Blasdell, Kim R., Bradfute, Steven B., Briese, Thomas, Brown, Paul A., Bruggmann, Rémy, Buchholz, Ursula J., Buchmeier, Michael J., Bukreyev, Alexander, Burt, Felicity, Büttner, Carmen, Calisher, Charles H., Candresse, Thierry, Carson, Jeremy, Casas, Inmaculada, Chandran, Kartik, Charrel, Rémi N., Chiaki, Yuya, Crane, Anya, Crane, Mark, Dacheux, Laurent, Bó, Elena Dal, de la Torre, Juan Carlos, de Lamballerie, Xavier, de Souza, William M., de Swart, Rik L., Dheilly, Nolwenn M., Di Paola, Nicholas, Di Serio, Francesco, Dietzgen, Ralf G., Digiaro, Michele, Drexler, J. Felix, Duprex, W. Paul, Dürrwald, Ralf, Easton, Andrew J., Elbeaino, Toufic, Ergünay, Koray, Feng, Guozhong, Feuvrier, Claudette, Firth, Andrew E., Fooks, Anthony R., Formenty, Pierre B. H., Freitas-Astúa, Juliana, Gago-Zachert, Selma, García, María Laura, García-Sastre, Adolfo, Garrison, Aura R., Godwin, Scott E., Gonzalez, Jean-Paul J., de Bellocq, Joëlle Goüy, Griffiths, Anthony, Groschup, Martin H., Günther, Stephan, Hammond, John, Hepojoki, Jussi, Hierweger, Melanie M., Hongō, Seiji, Horie, Masayuki, Horikawa, Hidenori, Hughes, Holly R., Hume, Adam J., Hyndman, Timothy H., Jiāng, Dàohóng, Jonson, Gilda B., Junglen, Sandra, Kadono, Fujio, Karlin, David G., Klempa, Boris, Klingström, Jonas, Koch, Michel C., Kondō, Hideki, Koonin, Eugene V., Krásová, Jarmila, Krupovic, Mart, Kubota, Kenji, Kuzmin, Ivan V., Laenen, Lies, Lambert, Amy J., Lǐ, Jiànróng, Li, Jun-Min, Lieffrig, François, Lukashevich, Igor S., Luo, Dongsheng, Maes, Piet, Marklewitz, Marco, Marshall, Sergio H., Marzano, Shin-Yi L., McCauley, John W., Mirazimi, Ali, Mohr, Peter G., Moody, Nick J. G., Morita, Yasuaki, Morrison, Richard N., Mühlberger, Elke, Naidu, Rayapati, Natsuaki, Tomohide, Navarro, José A., Neriya, Yutaro, Netesov, Sergey V., Neumann, Gabriele, Nowotny, Norbert, Ochoa-Corona, Francisco M., Palacios, Gustavo, Pallandre, Laurane, Pallás, Vicente, Papa, Anna, Paraskevopoulou, Sofia, Parrish, Colin R., Pauvolid-Corrêa, Alex, Pawęska, Janusz T., Pérez, Daniel R., Pfaff, Florian, Plemper, Richard K., Postler, Thomas S., Pozet, Françoise, Radoshitzky, Sheli R., Ramos-González, Pedro L., Rehanek, Marius, Resende, Renato O., Reyes, Carina A., Romanowski, Víctor, Rubbenstroth, Dennis, Rubino, Luisa, Rumbou, Artemis, Runstadler, Jonathan A., Rupp, Melanie, Sabanadzovic, Sead, Sasaya, Takahide, Schmidt-Posthaus, Heike, Schwemmle, Martin, Seuberlich, Torsten, Sharpe, Stephen R., Shi, Mang, Sironi, Manuela, Smither, Sophie, Song, Jin-Won, Spann, Kirsten M., Spengler, Jessica R., Stenglein, Mark D., Takada, Ayato, Tesh, Robert B., Těšíková, Jana, Thornburg, Natalie J., Tischler, Nicole D., Tomitaka, Yasuhiro, Tomonaga, Keizō, Tordo, Noël, Tsunekawa, Kenta, Turina, Massimo, Tzanetakis, Ioannis E., Vaira, Anna Maria, van den Hoogen, Bernadette, Vanmechelen, Bert, Vasilakis, Nikos, Verbeek, Martin, von Bargen, Susanne, Wada, Jiro, Wahl, Victoria, Walker, Peter J., Whitfield, Anna E., Williams, John V., Wolf, Yuri I., Yamasaki, Junki, Yanagisawa, Hironobu, Ye, Gongyin, Zhang, Yong-Zhen, and Økland, Arnfinn Lodden

Published
2022
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6. A single intranasal dose of human parainfluenza virus type 3-vectored vaccine induces effective antibody and memory T cell response in the lungs and protects hamsters against SARS-CoV-2

Author

Ilinykh, Philipp A., Periasamy, Sivakumar, Huang, Kai, Kuzmina, Natalia A., Ramanathan, Palaniappan, Meyer, Michelle N., Mire, Chad E., Kuzmin, Ivan V., Bharaj, Preeti, Endsley, Jessica R., Chikina, Maria, Sealfon, Stuart C., Widen, Steven G., Endsley, Mark A., and Bukreyev, Alexander

Published
2022
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7. 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Author

Kuhn, Jens H., Adkins, Scott, Alioto, Daniela, Alkhovsky, Sergey V., Amarasinghe, Gaya K., Anthony, Simon J., Avšič-Županc, Tatjana, Ayllón, María A., Bahl, Justin, Balkema-Buschmann, Anne, Ballinger, Matthew J., Bartonička, Tomáš, Basler, Christopher, Bavari, Sina, Beer, Martin, Bente, Dennis A., Bergeron, Éric, Bird, Brian H., Blair, Carol, Blasdell, Kim R., Bradfute, Steven B., Breyta, Rachel, Briese, Thomas, Brown, Paul A., Buchholz, Ursula J., Buchmeier, Michael J., Bukreyev, Alexander, Burt, Felicity, Buzkan, Nihal, Calisher, Charles H., Cao, Mengji, Casas, Inmaculada, Chamberlain, John, Chandran, Kartik, Charrel, Rémi N., Chen, Biao, Chiumenti, Michela, Choi, Il-Ryong, Clegg, J. Christopher S., Crozier, Ian, da Graça, John V., Dal Bó, Elena, Dávila, Alberto M. R., de la Torre, Juan Carlos, de Lamballerie, Xavier, de Swart, Rik L., Di Bello, Patrick L., Di Paola, Nicholas, Di Serio, Francesco, Dietzgen, Ralf G., Digiaro, Michele, Dolja, Valerian V., Dolnik, Olga, Drebot, Michael A., Drexler, Jan Felix, Dürrwald, Ralf, Dufkova, Lucie, Dundon, William G., Duprex, W. Paul, Dye, John M., Easton, Andrew J., Ebihara, Hideki, Elbeaino, Toufic, Ergünay, Koray, Fernandes, Jorlan, Fooks, Anthony R., Formenty, Pierre B. H., Forth, Leonie F., Fouchier, Ron A. M., Freitas-Astúa, Juliana, Gago-Zachert, Selma, Gāo, George Fú, García, María Laura, García-Sastre, Adolfo, Garrison, Aura R., Gbakima, Aiah, Goldstein, Tracey, Gonzalez, Jean-Paul J., Griffiths, Anthony, Groschup, Martin H., Günther, Stephan, Guterres, Alexandro, Hall, Roy A., Hammond, John, Hassan, Mohamed, Hepojoki, Jussi, Hepojoki, Satu, Hetzel, Udo, Hewson, Roger, Hoffmann, Bernd, Hongo, Seiji, Höper, Dirk, Horie, Masayuki, Hughes, Holly R., Hyndman, Timothy H., Jambai, Amara, Jardim, Rodrigo, Jiāng, Dàohóng, Jin, Qi, Jonson, Gilda B., Junglen, Sandra, Karadağ, Serpil, Keller, Karen E., Klempa, Boris, Klingström, Jonas, Kobinger, Gary, Kondō, Hideki, Koonin, Eugene V., Krupovic, Mart, Kurath, Gael, Kuzmin, Ivan V., Laenen, Lies, Lamb, Robert A., Lambert, Amy J., Langevin, Stanley L., Lee, Benhur, Lemos, Elba R. S., Leroy, Eric M., Li, Dexin, Lǐ, Jiànróng, Liang, Mifang, Liú, Wénwén, Liú, Yàn, Lukashevich, Igor S., Maes, Piet, Marciel de Souza, William, Marklewitz, Marco, Marshall, Sergio H., Martelli, Giovanni P., Martin, Robert R., Marzano, Shin-Yi L., Massart, Sébastien, McCauley, John W., Mielke-Ehret, Nicole, Minafra, Angelantonio, Minutolo, Maria, Mirazimi, Ali, Mühlbach, Hans-Peter, Mühlberger, Elke, Naidu, Rayapati, Natsuaki, Tomohide, Navarro, Beatriz, Navarro, José A., Netesov, Sergey V., Neumann, Gabriele, Nowotny, Norbert, Nunes, Márcio R. T., Nylund, Are, Økland, Arnfinn L., Oliveira, Renata C., Palacios, Gustavo, Pallas, Vicente, Pályi, Bernadett, Papa, Anna, Parrish, Colin R., Pauvolid-Corrêa, Alex, Pawęska, Janusz T., Payne, Susan, Pérez, Daniel R., Pfaff, Florian, Radoshitzky, Sheli R., Rahman, Aziz-ul, Ramos-González, Pedro L., Resende, Renato O., Reyes, Carina A., Rima, Bertus K., Romanowski, Víctor, Robles Luna, Gabriel, Rota, Paul, Rubbenstroth, Dennis, Runstadler, Jonathan A., Ruzek, Daniel, Sabanadzovic, Sead, Salát, Jiří, Sall, Amadou Alpha, Salvato, Maria S., Sarpkaya, Kamil, Sasaya, Takahide, Schwemmle, Martin, Shabbir, Muhammad Z., Shí, Xiǎohóng, Shí, Zhènglì, Shirako, Yukio, Simmonds, Peter, Širmarová, Jana, Sironi, Manuela, Smither, Sophie, Smura, Teemu, Song, Jin-Won, Spann, Kirsten M., Spengler, Jessica R., Stenglein, Mark D., Stone, David M., Straková, Petra, Takada, Ayato, Tesh, Robert B., Thornburg, Natalie J., Tomonaga, Keizō, Tordo, Noël, Towner, Jonathan S., Turina, Massimo, Tzanetakis, Ioannis, Ulrich, Rainer G., Vaira, Anna Maria, van den Hoogen, Bernadette, Varsani, Arvind, Vasilakis, Nikos, Verbeek, Martin, Wahl, Victoria, Walker, Peter J., Wang, Hui, Wang, Jianwei, Wang, Xifeng, Wang, Lin-Fa, Wèi, Tàiyún, Wells, Heather, Whitfield, Anna E., Williams, John V., Wolf, Yuri I., Wú, Zhìqiáng, Yang, Xin, Yáng, Xīnglóu, Yu, Xuejie, Yutin, Natalya, Zerbini, F. Murilo, Zhang, Tong, Zhang, Yong-Zhen, Zhou, Guohui, and Zhou, Xueping

Published
2020
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8. Taxonomy of the order Mononegavirales: update 2019

Author

Amarasinghe, Gaya K., Ayllón, María A., Bào, Yīmíng, Basler, Christopher F., Bavari, Sina, Blasdell, Kim R., Briese, Thomas, Brown, Paul A., Bukreyev, Alexander, Balkema-Buschmann, Anne, Buchholz, Ursula J., Chabi-Jesus, Camila, Chandran, Kartik, Chiapponi, Chiara, Crozier, Ian, de Swart, Rik L., Dietzgen, Ralf G., Dolnik, Olga, Drexler, Jan F., Dürrwald, Ralf, Dundon, William G., Duprex, W. Paul, Dye, John M., Easton, Andrew J., Fooks, Anthony R., Formenty, Pierre B. H., Fouchier, Ron A. M., Freitas-Astúa, Juliana, Griffiths, Anthony, Hewson, Roger, Horie, Masayuki, Hyndman, Timothy H., Jiāng, Dàohóng, Kitajima, Elliott W., Kobinger, Gary P., Kondō, Hideki, Kurath, Gael, Kuzmin, Ivan V., Lamb, Robert A., Lavazza, Antonio, Lee, Benhur, Lelli, Davide, Leroy, Eric M., Lǐ, Jiànróng, Maes, Piet, Marzano, Shin-Yi L., Moreno, Ana, Mühlberger, Elke, Netesov, Sergey V., Nowotny, Norbert, Nylund, Are, Økland, Arnfinn L., Palacios, Gustavo, Pályi, Bernadett, Pawęska, Janusz T., Payne, Susan L., Prosperi, Alice, Ramos-González, Pedro Luis, Rima, Bertus K., Rota, Paul, Rubbenstroth, Dennis, Shī, Mǎng, Simmonds, Peter, Smither, Sophie J., Sozzi, Enrica, Spann, Kirsten, Stenglein, Mark D., Stone, David M., Takada, Ayato, Tesh, Robert B., Tomonaga, Keizō, Tordo, Noël, Towner, Jonathan S., van den Hoogen, Bernadette, Vasilakis, Nikos, Wahl, Victoria, Walker, Peter J., Wang, Lin-Fa, Whitfield, Anna E., Williams, John V., Zerbini, F. Murilo, Zhāng, Tāo, Zhang, Yong-Zhen, and Kuhn, Jens H.

Published
2019
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9. Taxonomy of the order Mononegavirales: second update 2018

Author

Maes, Piet, Amarasinghe, Gaya K., Ayllón, María A., Basler, Christopher F., Bavari, Sina, Blasdell, Kim R., Briese, Thomas, Brown, Paul A., Bukreyev, Alexander, Balkema-Buschmann, Anne, Buchholz, Ursula J., Chandran, Kartik, Crozier, Ian, de Swart, Rik L., Dietzgen, Ralf G., Dolnik, Olga, Domier, Leslie L., Drexler, Jan F., Dürrwald, Ralf, Dundon, William G., Duprex, W. Paul, Dye, John M., Easton, Andrew J., Fooks, Anthony R., Formenty, Pierre B. H., Fouchier, Ron A. M., Freitas-Astúa, Juliana, Ghedin, Elodie, Griffiths, Anthony, Hewson, Roger, Horie, Masayuki, Hurwitz, Julia L., Hyndman, Timothy H., Jiāng, Dàohóng, Kobinger, Gary P., Kondō, Hideki, Kurath, Gael, Kuzmin, Ivan V., Lamb, Robert A., Lee, Benhur, Leroy, Eric M., Lǐ, Jiànróng, Marzano, Shin-Yi L., Mühlberger, Elke, Netesov, Sergey V., Nowotny, Norbert, Palacios, Gustavo, Pályi, Bernadett, Pawęska, Janusz T., Payne, Susan L., Rima, Bertus K., Rota, Paul, Rubbenstroth, Dennis, Simmonds, Peter, Smither, Sophie J., Song, Qisheng, Song, Timothy, Spann, Kirsten, Stenglein, Mark D., Stone, David M., Takada, Ayato, Tesh, Robert B., Tomonaga, Keizō, Tordo, Noël, Towner, Jonathan S., van den Hoogen, Bernadette, Vasilakis, Nikos, Wahl, Victoria, Walker, Peter J., Wang, David, Wang, Lin-Fa, Whitfield, Anna E., Williams, John V., Yè, Gōngyín, Zerbini, F. Murilo, Zhang, Yong-Zhen, and Kuhn, Jens H.

Published
2019
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10. Bats are a major natural reservoir for hepaciviruses and pegiviruses

Author

Quan, Phenix-Lan, Firth, Cadhla, Conte, Juliette M., Williams, Simon H., Zambrana-Torrelio, Carlos M., Anthony, Simon J., Ellison, James A., Gilbert, Amy T., Kuzmin, Ivan V., Niezgoda, Michael, Osinubi, Modupe O. V., Recuenco, Sergio, Markotter, Wanda, Breiman, Robert F., Kalemba, Lems, Malekani, Jean, Lindblade, Kim A., Rostal, Melinda K., Ojeda-Flores, Rafael, Suzan, Gerardo, Davis, Lora B., Blau, Dianna M., Ogunkoya, Albert B., Castillo, Danilo A. Alvarez, Moran, David, Ngam, Sali, Akaibe, Dudu, Agwanda, Bernard, Briese, Thomas, Epstein, Jonathan H., Daszak, Peter, Rupprecht, Charles E., Holmes, Edward C., and Lipkin, W. Ian

Published
2013

11. ICTV Virus Taxonomy Profile: Rhabdoviridae 2022

Author

Walker, Peter J., Freitas-Astúa, Juliana, Bejerman, Nicolas Esteban, Blasdell, Kim R., Breyta, Rachel, Dietzgen, Ralf G., Fooks, Anthony R, Kondo, Hideki, Kurath, Gael, Kuzmin, Ivan V., and Whitfield, Anna E.

Subjects
Taxonomía, ICTV Profile, Perfil, Rhabdoviridae, Taxonomía de Virus, Profiles, Taxonomy
Abstract

The family Rhabdoviridae comprises viruses with negative-sense (−) RNA genomes of 10–16 kb. Virions are typically enveloped with bullet-shaped or bacilliform morphology but can also be non-enveloped filaments. Rhabdoviruses infect plants or animals, including mammals, birds, reptiles, amphibians or fish, as well as arthropods, which serve as single hosts or act as biological vectors for transmission to animals or plants. Rhabdoviruses include important pathogens of humans, livestock, fish or agricultural crops. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Rhabdoviridae, which is available at ictv.global/report/rhabdoviridae. Instituto de Patología Vegetal Fil: Walker, Peter J. University of Queensland. ​School of Chemistry and Molecular Biosciences; Australia Fil: Freitas-Astúa, Juliana. Brazilian Agricultural Research Corporation; Brasil Fil: Bejerman, Nicolas Esteban. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: Bejerman, Nicolas Esteban. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina Fil: Blasdell, Kim R. ​CSIRO Health and Biosecurity; Australia Fil: Breyta, Rachel. University of Washington; Estados Unidos Fil: Dietzgen, Ralf G. University of Queensland. Queensland Alliance for Agriculture and Food Innovation; Australia Fil: Fooks, Anthony R. Animal and Plant Health Agency Addlestone; Reino Unido Fil: Kondo, Hideki. Okayama University. Institute of Plant Science and Resources; Japón Fil: Kurath, Gael. Western Fisheries Research Center; Estados Unidos Fil: Kuzmin, Ivan V. University of Texas Medical Branch; Estados Unidos Fil: Whitfield, Anna E. North Carolina State University. Department of Entomology and Plant Pathology; Estados Unidos

Published
2022
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12. Novel paramyxoviruses in bats from sub-Saharan Africa, 2007-2012

Author

Mortlock, Marinda, Kuzmin, Ivan V., Weyer, Jacqueline, Gilbert, Amy T., Agwanda, Bernard, Rupprecht, Charles E., Nel, Louis H., Kearney, Teresa, Malekani, Jean M., and Markotter, Wanda

Subjects
Diseases, Research, Genetic aspects, Health aspects, Bats (Animals) -- Diseases -- Research, Paramyxoviruses -- Health aspects -- Research -- Genetic aspects, Phylogeny -- Research
Abstract

Members of the Paramyxoviridae family are enveloped negative-sense RNA viruses, further classified into either the Pneumovirinae or Paramyxovirinae subfamily (1). The Paramyxovirinae subfamily has increasingly been associated with bat species [...]

Published
2015
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20. List of Contributors

Author

Akesowan, Surasak, primary, Balachandran, C., additional, Mechlia, Mohamed Ben, additional, Bourhy, Hervé, additional, Caporale, Graciane, additional, Castel, Guillaume, additional, Cliquet, Florence, additional, Dacheux, Laurent, additional, Daviratanasilpa, Svastijaya, additional, Dietzschold, Bernhard, additional, Drew, Clifton P., additional, Fehlner-Gardiner, Christine, additional, Fooks, Anthony R., additional, Frazatti-Gallina, Neuza Maria, additional, Freuling, Conrad M., additional, Gao, Bin, additional, Goldsmith, Cynthia S., additional, Hatta, Hajime, additional, Hemmala, Wachiraporn, additional, Inoue, Satoshi, additional, Jallet, Corinne, additional, Khawplod, Pakamatz, additional, Khomvilai, Sumana, additional, Kotait, Ivanete, additional, Kuzmin, Ivan V., additional, Limsuwun, Kornvika, additional, Carrieri, Maria Luiza, additional, Malerczyk, Claudius, additional, Mayes, Bonny, additional, McElhinney, Lorraine M., additional, Messenger, Sharon, additional, Moore, Susan M., additional, Moreira, Wildeberg C., additional, Moura, Wlamir C., additional, Müller, Helmut, additional, Müller, Thomas F., additional, Nagarajan, Thirumeni, additional, Ngoepe, Ernest, additional, Pakmanee, Naruemol, additional, Park, Chun-Ho, additional, Peixoto, Zélia, additional, Pornmuttakun, Duangporn, additional, Qu, Mingsheng, additional, Queiroz, Luzia H., additional, Raj, G. Dhinakar, additional, Rajasekaran, Angannan, additional, Ramya, Rajendran, additional, Rudd, Robert J., additional, Rupprecht, Charles E., additional, Sabeta, Claude, additional, Sakolpap, Lalida, additional, Servat, Alexandre, additional, Shieh, Wun-Ju, additional, Silva, Andréa, additional, Silva, Marlon V., additional, Sivakumar, Sakthivel, additional, Tantavichien, Thanpet, additional, Thomas, William D., additional, Tirumurugaan, K.G., additional, Tordo, Noël, additional, Wandeler, Alexander I., additional, Wasniewski, Marine, additional, Yager, Mary L., additional, and Zaki, Sherif R., additional

Published
2015
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23. Bartonella spp. in Bats, Kenya

Author

Kosoy, Michael, Bai, Ying, Lynch, Tarah, Kuzmin, Ivan V., Niezgoda, Michael, Franka, Richard, Agwanda, Bernard, Breiman, Robert F., and Rupprecht, Charles E.

Subjects
Identification and classification, Genetic aspects, Research, Health aspects, Bats (Animals) -- Health aspects, Bartonella -- Identification and classification -- Genetic aspects, Phylogeny -- Research, Bats -- Health aspects
Abstract

An unprecedented, increasing interest in bats as reservoirs of infectious diseases occurred during the past decade. Mounting evidence indicates an association of bats with various emerging infections, some with high [...]

Published
2010
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24. Reassortant group a rotavirus from straw-colored fruit bat (eidolon helvum)

Author

Esona, Mathew D., Mijatovic-Rustempasic, Slavica, Conrardy, Christina, Tong, Suxiang, Kuzmin, Ivan V., Agwanda, Bernard, Breiman, Robert F., Banyai, Krisztian, Niezgoda, Michael, Rupprecht, Charles E., Gentsch, Jon R., and Bowen, Michael D.

Subjects
United States. Centers for Disease Control and Prevention, Genetic aspects, Viral proteins, Marburg virus disease -- Genetic aspects, Amino acids
Abstract

Rotaviruses are members of the family Reoviridae and genus Rotavirus and contain 3 primary species: Rotavirus A, Rotavirus B, and Rotavirus C (1). The rotavirus genome contains 11 segments of [...]

Published
2010
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25. Detection of novel SARS-like and other coronaviruses in bats from Kenya

Author

Tong, Suxiang, Conrardy, Christina, Ruone, Susan, Kuzmin, Ivan V., Guo, Xiling, Tao, Ying, Niezgoda, Michael, Haynes, Lia, Agwanda, Bernard, Breiman, Robert F., Anderson, Larry J., and Rupprecht, Charles E.

Subjects
United States. Centers for Disease Control and Prevention, Health aspects, Bats (Animals) -- Health aspects, Severe acute respiratory syndrome -- Health aspects, Continents -- Health aspects, Bats -- Health aspects
Abstract

Diverse coronaviruses have been identified in bats from several continents but not from Africa. We identified group 1 and 2 coronaviruses in bats in Kenya, including SARS-related coronaviruses. The sequence [...]

Published
2009

26. List of Contributors

Author

Bordignon, Juliano, primary, Chaiyabutr, Narongsak, additional, Cliquet, Florence, additional, Coertse, Jessica, additional, Coetzer, Andre, additional, Dastjerdi, Akbar, additional, De Battisti, Cristian, additional, De Benedictis, Paola, additional, de Haard, Hans, additional, Ellis, Richard J., additional, Ertl, Hildegund C.J., additional, Faber, Milosz, additional, Fischer, Melina, additional, Fooks, Anthony R., additional, Freuling, Conrad M., additional, Hemachudha, Thiravat, additional, Hoffmann, Bernd, additional, Hultberg, Anna, additional, Hundt, Boris, additional, Itou, Takuya, additional, Johnson, Nicholas, additional, Kasempimolporn, Songsri, additional, Kuzmin, Ivan V., additional, Laothamatas, Jiraporn, additional, Madhusudana, Shampur N., additional, Marissen, Wilfred E., additional, Markotter, Wanda, additional, Marston, Denise A., additional, McElhinney, Lorraine M., additional, Muhamuda, Kader, additional, Müller, Thomas F., additional, Nadin-Davis, Susan A., additional, Nagarajan, Thirumeni, additional, Nel, Louis H., additional, Neubert, Andreas, additional, Neumann, Grit, additional, Nishizono, Akira, additional, Picard-Meyer, Evelyne, additional, Reeta, Mani, additional, Robardet, Emmanuelle, additional, Rupprecht, Charles, additional, Saunders, Michael, additional, Sitprija, Visith, additional, Stortelers, Catelijne, additional, Sungkarat, Witaya, additional, Van Gucht, Steven, additional, Vanlandschoot, Peter, additional, Verrips, Theo, additional, Vos, Ad, additional, Weyer, Jacqueline, additional, Wise, Emma, additional, Wright, Edward, additional, and Zanetti, Carlos Roberto, additional

Published
2014
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29. Phylogenetic and epidemiologic evidence of multiyear incubation in human rabies

Author

Boland, Torrey A., McGuone, Declan, Jindal, Jenelle, Rocha, Marcelo, Cumming, Melissa, Rupprecht, Charles E., Barbosa, Taciana Fernandes Souza, de Novaes Oliveira, Rafael, Chu, Catherine J., Cole, Andrew J., Kotait, Ivanete, Kuzmina, Natalia A., Yager, Pamela A., Kuzmin, Ivan V., Hedley-Whyte, Tessa E., Brown, Catherine M., and Rosenthal, Eric S.

Published
2014
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30. Rabies in endangered Ethiopian wolves

Author

Randall, Deborah A., Williams, Stuart D., Kuzmin, Ivan V., Rupprecht, Charles E., Tallents, Lucy A., Tefera, Zelealem, Argaw, Kifle, Shiferaw, Fekadu, Knobel, Darryn L., Sillero-Zubiri, Claudio, and Laurenson, M. Karen

Subjects
Drug therapy, Health aspects, Rabies -- Health aspects -- Drug therapy
Abstract

With rabies emerging as a particular threat to wild canids, we report on a rabies outbreak in a subpopulation of endangered Ethiopian wolves in the Bale Mountains, Ethiopia, in 2003 [...]

Published
2004

31. New lyssavirus genotype from the Lesser Mouse-eared Bat (Myotis blythi), Kyrghyzstan. (Research)

Author

Arai, Yohko T., Kuzmin, Ivan V., Kameoka, Yosuke, and Botvinkin, Alexandr D.

Subjects
Diseases, Research, Causes of, Bats (Animals) -- Diseases -- Research, Virus diseases -- Research -- Causes of
Abstract

The Aravan virus was isolated from a Lesser Mouse-eared Bat (Myotis blythi) in the Osh region of Kyrghyzstan, central Asia, in 1991. We determined the complete sequence of the nucleoprotein [...]

Published
2003

32. Contributors

Author

Baer, George M., primary, Briggs, Deborah J., additional, Childs, James E., additional, Cleaveland, Sarah, additional, Dreesen, David W., additional, Fèvre, Eric, additional, Gordon, Chandra R., additional, Hanlon, Cathleen A., additional, Jackson, Alan C., additional, Johnston, David H., additional, Kaare, Magai, additional, Knobel, Darryn, additional, Kuzmin, Ivan V., additional, Lafon, Monique, additional, Mahendra, B.J., additional, Moore, Susan M., additional, Murphy, Frederick A., additional, Nadin-Davis, Susan A., additional, Niezgoda, Michael, additional, Real, Leslie A., additional, Rosatte, Richard C., additional, Rossiter, John P., additional, Rupprecht, Charles E., additional, Tinline, Rowland R., additional, Trimarchi, Charles V., additional, and Wunner, William H., additional

Published
2007
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36. 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Author

National Institute of Allergy and Infectious Diseases (US), National Cancer Institute (US), National Institutes of Health (US), Frederick National Laboratory for Cancer Research (US), US Department of Homeland Security, National Institute of Food and Agriculture (US), Kuhn, Jens H. [0000-0002-7800-6045], Adkins, Scott [0000-0003-0095-8414], Alioto, Daniela [0000-0002-4954-8363], Alkhovsky, Sergey V. [0000-0001-6913-5841], Amarasinghe, Gaya K. [0000-0002-0418-9707], Avsic-Zupanc, Tatjana [0000-0001-6243-0688], Ayllón, María A. [0000-0001-7893-6106], Bahl, Justin [0000-0001-7572-4300], Balkema-Buschmann, A. [0000-0001-7613-9592], Ballinger, Matthew J. [0000-0001-7453-8725], Bartonička, Tomáš [0000-0001-7335-2435], Basler, Christopher F. [0000-0003-4195-425X], Bavari, Sina [0000-0001-8424-5635], Beer, Martin [0000-0002-0598-5254], Bente, Dennis A. [0000-0002-5150-7368], Bergeron, Éric [0000-0003-3398-8628], Bird, Brian H. [0000-0001-8170-8710], Blair, Carol D. 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Murilo [0000-0001-8617-0200], Kuhn, Jens H., Adkins, Scott, Alioto, Daniela, Alkhovsky, Sergey V., Amarasinghe, Gaya K., Anthony, Simon J., Avsic-Zupanc, Tatjana, Ayllón, María A., Bahl, Justin, Balkema-Buschmann, A., Ballinger, Matthew J., Bartonička, Tomáš, Basler, Christopher F., Bavari, Sina, Beer, Martin, Bente, Dennis A., Bergeron, Éric, Bird, Brian H., Blair, Carol D., Blasdell, Kim R., Bradfute, Steven B., Breyta, Rachel, Briese, Thomas, Brown, Paul A., Buchholz, Ursula J., Buchmeier, Michael J., Bukreyev, Alexander, Burt, Felicity, Buzkan, Nihal, Calisher, Charles H., Cao, Mengji, Casas, Inmaculada, Chamberlain, John, Chandran, Kartik, Charrel, Rémi N., Chen, Biao, Chiumenti, Michela, Choi, Il-Ryong, Clegg, J Christopher S., Crozier, Ian, da Graça, John V., Dal Bó, Elena, Dávila, Alberto M.R., de la Torre, J. C., de Lamballerie, Xavier, De Swart, Rik L., Di Bello, Patrick L., Di Paola, Nicholas, Di Serio, Francesco, Dietzgen, Ralf G., Digiaro, Michele, Dolja, Valerian V., Dolnik, Olga, Drebot, Michael A., Drexler, J. Felix, Dürrwald, Ralf, Dufkova, Lucie, Dundon, William G., Duprex, W. Paul, Dye, John M., Easton, Andrew J., Ebihara, Hideki, Elbeaino, Toufic, Ergünay, Koray, Fernandes, Jorlan, Fooks, Anthony R., Formenty, Pierre B.H., Forth, Leonie F., Fouchier, Ron A.M., Freitas-Astúa, Juliana, Gago-Zachert, Selma, Gāo, George Fú, García, María Laura, García-Sastre, Adolfo, Garrison, Aura R., Gbakima, Aiah, Goldstein, Tracey, Gonzalez, Jean-Paul J., Griffiths, Anthony, Groschup, M. H., Günther, Stephan, Guterres, Alexandro, Hall, Roy A., Hammond, John, Hassan, Mohamed, Hepojoki, Jussi, Hepojoki, Satu, Hetzel, Udo, Hewson, Roger, Hoffmann, Bernd, Hongo, Seiji, Höper, Dirk, Horie, Masayuki, Hughes, Holly R., Hyndman, Timothy, Jambai, Amara, Jardim, Rodrigo, Jiāng, Dàohóng, Jin, Qi, Jonson, Gilda B., Junglen, Sandra, Karadağ, Serpil, Keller, Karen E., Klempa, B., Klingström, Jonas, Kobinger, Gary, Kondō, Hideki, Koonin, Eugene V., Krupovic, Mart, Kurath, Gael, Kuzmin, Ivan V., Laenen, Lies, Lamb, Robert A., Lambert, Amy J., Langevin, Stanley L., Lee, Benhur, Lemos, Elba R.S., Leroy, Eric M., Li, Dexin, Li, Jianrong, Liang, Mifang, Liú, Wénwén, Liu, Yang, Lukashevich, Igor S., Maes, Piet, Marciel de Souza, William, Marklewitz, Marco, Marshall, Sergio H., Martelli, Giovanni P, Martin, Robert R., Marzano, Shin-Yi L., Massart, Sebastien, McCauley, John W., Mielke-Ehret, Nicole, Minafra, Angelantonio, Minutolo, Maria, Mirazimi, Ali, Mühlbach, Hans-Peter, Mühlberger, Elke, Naidu, Rayapati, Natsuaki, Tomohide, Navarro, Beatriz, Navarro, José A., Netesov, Sergey V., Neumann, Gabriele, Nowotny, N., Nunes, Márcio R.T., Nylund, Are, Okland, Arnfinn Lodden, Oliveira, Renata C., Palacios, Gustavo, Pallás, Vicente, Pályi, Bernadett, Papa, Anna, Parrish, Colin R., Pauvolid-Corrêa, Alex, Pawęska, Janusz T., Payne, Susan, Pérez, Daniel R., Pfaff, Florian, Radoshitzky, Sheli R., Rahman, Aziz-Ul, Ramos-González, Pedro L., Resende, Renato O., Reyes, Carina A., Rima, Bertus K., Romanowski, Víctor, Robles Luna, Gabriel, Rota, Paul, Rubbenstroth, Dennis, Runstadler, Jonathan A., Ruzek, Daniel, Sabanadzovic, Sead, Salát, Jiří, Sall, Amadou Alpha, Salvato, Maria S., Sarpkaya, Kamil, Sasaya, Takahide, Schwemmle, Martin, Shabbir, Muhammad Z., Shí, Xiǎohóng, Shí, Zhènglì, Shirako, Yukio, Simmonds, Peter, Širmarová, Jana, Sironi, Manuela, Smither, Sophie, Smura, Teemu, Song, Jin-Won, Spann, Kirsten, Spengler, Jessica R., Stenglein, Mark D., Stone, David M., Straková, Petra, Takada, Ayato, Tesh, Robert B., Thornburg, Natalie J., Tomonaga, Keizō, Tordo, Noël, Towner, Jonathan S., Turina, Massimo, Tzanetakis, Ioannis E., Ulrich, R. G., Vaira, Anna Maria, Van den Hoogen, Bernadette, Varsani, Arvind, Vasilakis, Nikos, Verbeek, Martin, Wahl, Victoria, Walker, Peter J., Wang, Hui, Wang, Jianwei, Wang, Xifeng, Wang, Lin-Fa, Wèi, Tàiyún, Wells, Heather, Whitfield, Anna E., Williams, John V., Wolf, Yuri I., Wú, Zhìqiáng, Yang, Xin, Yáng, Xīnglóu, Yu, Xuejie, Yutin, Natalya, Zerbini, F. Murilo, Zhang, Tong, Zhang, Yong-Zhen, Zhou, Guohui, and Zhou, Xueping

Abstract

In March 2020, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. At the genus rank, 20 new genera were added, two were deleted, one was moved, and three were renamed. At the species rank, 160 species were added, four were deleted, ten were moved and renamed, and 30 species were renamed. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV.

Published
2020

37. Marburg virus in fruit bat, Kenya

Author

Kuzmin, Ivan V., Niezgoda, Michael, Franka, Richard, Agwanda, Bernard, Markotter, Wanda, Breiman, Robert F., Shieh, Wun-Ju, Zaki, Sherif R., and Rupprecht, Charles E.

Subjects
Diagnosis, Diseases, Genetic aspects, Research, Demographic aspects, Causes of, Marburg virus disease -- Causes of -- Diagnosis -- Demographic aspects -- Genetic aspects -- Research, Fruit bats -- Diseases
Abstract

To the Editor: Lake Victoria Marburgvirus (MARV) causes severe hemorrhagic fever with a high case-fatality rate in humans. Index cases occurred in Europe during 1967 among laboratory workers who handled [...]

Published
2010
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39. Possible emergence of West Caucasian bat virus in Africa

Author

Kuzmin, Ivan V., Niezgoda, Michael, Franka, Richard, Agwanda, Bernard, Markotter, Wanda, Beagley, Janet C., Urazova, Olga Yu, Breiman, Robert F., and Rupprecht, Charles E.

Subjects
Control, Distribution, Research, Health aspects, Company distribution practices, Bats (Animals) -- Health aspects -- Research -- Control, RNA viruses -- Health aspects -- Distribution -- Control -- Research, Bats -- Health aspects -- Research -- Control
Abstract

Bats are reservoir hosts of several emerging zoonotic RNA viruses (1). In particular, bats host a range of lyssaviruses, as has been reported from different continents (2). Presently, 7 species [...]

Published
2008

41. Lyssavirus surveillance in bats, Bangladesh

Author

Kuzmin, Ivan V., Niezgoda, Michael, Carroll, Darin S., Keeler, Natalie, Hossain, Mohammed Jahangir, Breiman, Robert F., Ksiazek, Thomas G., and Rupprecht, Charles E.

Subjects
Diagnosis, Diseases, Research, Bats (Animals) -- Diseases -- Research, Rabies -- Diagnosis -- Research, Bats -- Diseases -- Research
Abstract

Lyssavirus surveillance in bats was performed in Bangladesh during 2003 and 2004. No virus isolates were obtained. Three serum samples (all from Pteropus giganteus, n = 127) of 288 total [...]

Published
2006

42. Novel lyssaviruses isolated from bats in Russia

Author

Botvinkin, Alexandr D., Poleschuk, Elena M., Kuzmin, Ivan V., Borisova, Tatyana I., Gazaryan, Suren V., Yager, Pamela, and Rupprecht, Charles E.

Subjects
Research, Rabies -- Research
Abstract

Two new rabies-related viruses were discovered in Russia during 2002. Viruses were isolated from bats in Eastern Siberia near Baikal Lake and in the western Caucasus Mountains. After preliminary antigenic [...]

Published
2003

43. Pathogenesis of bat rabies in a natural reservoir: Comparative susceptibility of the straw-colored fruit bat (Eidolon helvum) to three strains of Lagos bat virus

Author

Suu-Ire, Richard, primary, Begeman, Lineke, additional, Banyard, Ashley C., additional, Breed, Andrew C., additional, Drosten, Christian, additional, Eggerbauer, Elisa, additional, Freuling, Conrad M., additional, Gibson, Louise, additional, Goharriz, Hooman, additional, Horton, Daniel L., additional, Jennings, Daisy, additional, Kuzmin, Ivan V., additional, Marston, Denise, additional, Ntiamoa-Baidu, Yaa, additional, Riesle Sbarbaro, Silke, additional, Selden, David, additional, Wise, Emma L., additional, Kuiken, Thijs, additional, Fooks, Anthony R., additional, Müller, Thomas, additional, Wood, James L. N., additional, and Cunningham, Andrew A., additional

Published
2018
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48. Phylogenetic and epidemiologic evidence of multiyear incubation in human rabies

Author

Boland, Torrey A., McGuone, Declan, Jindal, Jenelle, Rocha, Marcelo, Cumming, Melissa, Rupprecht, Charles E., Barbosa, Taciana Fernandes Souza, de Novaes Oliveira, Rafael, Chu, Catherine J., Cole, Andrew J., Kotait, Ivanete, Kuzmina, Natalia A., Yager, Pamela A., Kuzmin, Ivan V., Hedley-Whyte, E. Tessa, Brown, Catherine M., and Rosenthal, Eric S.

Subjects
Adult, Male, Dogs, Time Factors, Rabies, Animals, Emigrants and Immigrants, Humans, Article, Brazil, Phylogeny, United States, Infectious Disease Incubation Period
Abstract

Eight years after emigrating from Brazil, an otherwise healthy man developed rabies. An exposure prior to immigration was reported. Genetic analysis revealed a canine rabies virus variant found only in the patient’s home country, and the patient had not traveled internationally since immigrating to the United States. We describe how epidemiological, phylogenetic, and viral sequencing data provided confirmation that rabies encephalomyelitis may present after a long, multiyear incubation period, a consideration that previously has been hypothesized without the ability to exclude a more recent exposure. Accordingly, rabies should be considered in the diagnosis of any acute encephalitis, myelitis, or encephalomyelitis.

Published
2013

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