28 results on '"Kusumo H"'
Search Results
2. Raman spectra of polyethylene glycol/cellulose acetate butyrate biopolymer blend
- Author
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Marlina, D, primary, Novita, M, additional, Anwar, M T, additional, Kusumo, H, additional, and Sato, H, additional
- Published
- 2021
- Full Text
- View/download PDF
3. Analysis of transaction patterns at drug store with Apriori Algorithm
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Kusumo, H, primary, Marlina, D, additional, Novita, M, additional, and Anwar, M T, additional
- Published
- 2021
- Full Text
- View/download PDF
4. Prediction on the multiplet energy diagram of α-Al2O3: Mn4+ under pressure
- Author
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Novita, M, primary, Marlina, D, additional, Kusumo, H, additional, Anwar, M T, additional, and Ogasawara, K, additional
- Published
- 2021
- Full Text
- View/download PDF
5. Indicators of Smart City Using SNI ISO 37122:2019
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Kristiningrum, E, primary and Kusumo, H, additional
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- 2021
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6. Variability over space and time in the genetic structure of the winged kelp Alaria marginata
- Author
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Kusumo, H. T. and Druehl, L. D.
- Published
- 2000
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7. AMYGDALOID HISTONE ACETYLTRANSFERASE (HAT)-INDUCED CHROMATIN REMODELING: A ROLE IN ALCOHOL TOLERANCE AND DRINKING BEHAVIORS: 002
- Author
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Teppen, T., Sakharkar, A. J., Starkman, B., Tang, L., Kusumo, H., Shi, G., Zhang, H., and Pandey, S. C.
- Published
- 2012
8. CREB GENE AND CHROMATIN REMODELING: A ROLE IN ALCOHOLISM AND ANXIETY: 0973
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Starkman, B. G., Kusumo, H., Zhang, H., Sakharkar, A. J., and Pandey, S. C.
- Published
- 2011
9. Survival outcome and prognostic factors of patients with nasopharyngeal cancer in Yogyakarta Indonesia
- Author
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Hutajulu, S.H., primary, Howdon, D., additional, Hariadi, K.W. Taroeno, additional, Hardianti, M.S., additional, Purwanto, I., additional, Indrasari, S.R., additional, Herdini, C., additional, Hariwiyanto, B., additional, Ghozali, A., additional, Kusumo, H., additional, Dhamiyati, W., additional, Danarti, S.R.D., additional, Tan, I.B., additional, Kurnianda, J., additional, and Allsop, M.J., additional
- Published
- 2019
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10. Prevalence of Non-tuberculous Mycobacteria (NTM) in Surakarta, Indonesia: Higher Than Expected
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Saptawati, L, primary, Kusumo, H, additional, and Suryawati, B, additional
- Published
- 2019
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11. 291O - Survival outcome and prognostic factors of patients with nasopharyngeal cancer in Yogyakarta Indonesia
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Hutajulu, S.H., Howdon, D., Hariadi, K.W. Taroeno, Hardianti, M.S., Purwanto, I., Indrasari, S.R., Herdini, C., Hariwiyanto, B., Ghozali, A., Kusumo, H., Dhamiyati, W., Danarti, S.R.D., Tan, I.B., Kurnianda, J., and Allsop, M.J.
- Published
- 2019
- Full Text
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12. PENDAMPINGAN KETERAMPILAN CARA MENDAPATKAN, MENGGUNAKAN, MENYIMPAN, DAN MEMBUANG OBAT (DAGUSIBU) PADA MASYARAKAT
- Author
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Sadakata Sinulingga, Safyudin, Fatmawati, Subandrate, Kusumo Hariyadi, and Rini Yana
- Subjects
Agriculture - Abstract
Saat ini, akses masyarakat terhadap obat-obatan semakin mudah. Namun, hal tersebut tidak disertai dengan pemahaman yang benar terhadap obat-obatan. Akibatnya, hal tersebut menimbulkan berbagai masalah terkait obat seperti penggunasalahan dan pembuangan obat secara sembarangan. Oleh karena itu, masyarakat perlu diberi pengetahuan dan keterampilan yang benar tentang cara mendapatkan, menggunakan, menyimpan dan membuang obat (DAGUSIBU). Kegiatan pengabdian masyarakat ini berupa pendampingan dengan kegiatan utama penyuluhan dan demonstrasi tentang DAGUSIBU terhadap masyarakat di Kelurahan Keputeraan, Kota Lubuklinggau, Sumatera Selatan. Kegiatan diikuti oleh 34 orang peserta yang terdiri dari masyarakat dan kader kesehatan. Analisis keberhasilan kegiatan dilakukan dengan melakukan evaluasi sebelum dan sesudah penyuluhan. Dari kegiatan tersebut dapat diketahui bahwa hampir seluruh peserta tidak mengetahui tentang DAGUSIBU. Setelah diberikan penyuluhan dan demonstrasi, sebagian beserta dapat memamahi dengan baik dan memiliki keterampilan sederhana dalam DAGUSIBU. Dari hasil tersebut, diharapkan masyarakat dapat menerapkannya dalam kehidupan sehari-hari.Kegiatan pengabdian masyarakat berupa penyuluhan ini telah dapat meningkatkan pengetahuan dan keterampilan masyarakat dalam DAGUSIBU sehingga perlu diupayakan kegiatan yang berkesinambungan guna mencegah penggunasalahan obat dalam masyarakat. Kata kunci: DAGUSIBU, Obat, Pendampingan, Penyuluhan ABSTRACT Today, people's access to medicines is getting easier. However, this is not accompanied by a correct understanding of medicines. As a result, it raises various drug-related problems such as medicines abuse and indiscriminate disposal. Therefore, people need to be given the right knowledge and skills on how to get, use, store and dispose of medicines (DAGUSIBU). This community service activity is in the form of assistance with the main activities of counseling and demonstration about DAGUSIBU to the community in Keputeraan Village, Lubuklinggau City, South Sumatra. About 34 participants consisting of community members and health cadres attended the activity. Analysis of the success of activities carried out by evaluating before and after counseling. From these activities, it can be seen that almost no participants knew about DAGUSIBU. After being given counseling and demonstration, some of them along with be able to understand well and have simple skills in DAGUSIBU. From these results, it is expected that the community can apply it in everyday life. Community service activities in the form of counseling have been able to improve the knowledge and skills of the community in DAGUSIBU so that it needs to be pursued in a sustainable activity to prevent the use of drug problems in the community. Keywords: Assistance, Counseling, DAGUSIBU, Medicines
- Published
- 2019
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13. P319 Multicenter, comparative study of levofloxacin high-dose, IV oral sequential therapy for CAP with moxifloxacin in Indonesia
- Author
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Nawas, M. Arifin, primary, Soepandi, P., additional, Burhan, E., additional, Isbaniah, F., additional, Arimah, C., additional, Kusumo, D., additional, Suharno, W., additional, Soedarsono, S., additional, Kusumo, H., additional, Kosasih, A., additional, and Sugiri, Y.J.R., additional
- Published
- 2013
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14. Single-Assay Combination of Epstein-Barr Virus (EBV) EBNA1- and Viral Capsid Antigen-p18-Derived Synthetic Peptides for Measuring Anti-EBV Immunoglobulin G (IgG) and IgA Antibody Levels in Sera from Nasopharyngeal Carcinoma Patients: Options for Field Screening
- Author
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Fachiroh, J., primary, Paramita, D. K., additional, Hariwiyanto, B., additional, Harijadi, A., additional, Dahlia, H. L., additional, Indrasari, S. R., additional, Kusumo, H., additional, Zeng, Y. S., additional, Schouten, T., additional, Mubarika, S., additional, and Middeldorp, J. M., additional
- Published
- 2006
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15. Combination of gemcitabine and cisplatin (GC) chemotherapy for advanced or recurrent nasopharyngeal cancer (NPC): A phase II study
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Kurnianda, J., primary, Pardjono, E., additional, Adiwiyono, A., additional, Purwanto, I., additional, Hariwiyanto, B., additional, Haryadi, B., additional, Kusumo, H., additional, Rahardjo, B., additional, Buter, J., additional, and Giaccone, G., additional
- Published
- 2004
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16. Sonic and ultrasonic waves in agarwood trees (aquilaria microcarpa) inoculated with fusarium solani
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Karlinasari, L., Indahsuary, N., Kusumo, H. T., Santoso, E., Maman Turjaman, and Nandika, D.
17. Unraveling the epigenomic and transcriptomic interplay during alcohol-induced anxiolysis.
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Krishnan HR, Zhang H, Chen Y, Bohnsack JP, Shieh AW, Kusumo H, Drnevich J, Liu C, Grayson DR, Maienschein-Cline M, and Pandey SC
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- Animals, Rats, Ethanol pharmacology, Chromatin, Gene Expression Profiling, RNA, Messenger metabolism, Transcription Factors genetics, Epigenesis, Genetic genetics, Alcoholism genetics
- Abstract
Positive effects of alcohol drinking such as anxiolysis and euphoria appear to be a crucial factor in the initiation and maintenance of alcohol use disorder (AUD). However, the mechanisms that lead from chromatin reorganization to transcriptomic changes after acute ethanol exposure remain unknown. Here, we used Assay for Transposase-Accessible Chromatin followed by high throughput sequencing (ATAC-seq) and RNA-seq to investigate epigenomic and transcriptomic changes that underlie anxiolytic effects of acute ethanol using an animal model. Analysis of ATAC-seq data revealed an overall open or permissive chromatin state that was associated with transcriptomic changes in the amygdala after acute ethanol exposure. We identified a candidate gene, Hif3a (Hypoxia-inducible factor 3, alpha subunit), that had 'open' chromatin regions (ATAC-seq peaks), associated with significantly increased active epigenetic histone acetylation marks and decreased DNA methylation at these regions. The mRNA levels of Hif3a were increased by acute ethanol exposure, but decreased in the amygdala during withdrawal after chronic ethanol exposure. Knockdown of Hif3a expression in the central nucleus of amygdala attenuated acute ethanol-induced increases in Hif3a mRNA levels and blocked anxiolysis in rats. These data indicate that chromatin accessibility and transcriptomic signatures in the amygdala after acute ethanol exposure underlie anxiolysis and possibly prime the chromatin for the development of AUD., (© 2022. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
- Published
- 2022
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18. Survival outcome and prognostic factors of patients with nasopharyngeal cancer in Yogyakarta, Indonesia: A hospital-based retrospective study.
- Author
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Hutajulu SH, Howdon D, Taroeno-Hariadi KW, Hardianti MS, Purwanto I, Indrasari SR, Herdini C, Hariwiyanto B, Ghozali A, Kusumo H, Dhamiyati W, Dwidanarti SR, Tan IB, Kurnianda J, and Allsop MJ
- Subjects
- Adult, Aged, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Chemoradiotherapy methods, Cisplatin therapeutic use, Cohort Studies, Female, Hospitals, Humans, Indonesia epidemiology, Induction Chemotherapy methods, Kaplan-Meier Estimate, Male, Middle Aged, Nasopharyngeal Carcinoma pathology, Nasopharyngeal Neoplasms metabolism, Nasopharyngeal Neoplasms pathology, Prognosis, Proportional Hazards Models, Retrospective Studies, Socioeconomic Factors, Survival Analysis, Treatment Outcome, Nasopharyngeal Neoplasms mortality
- Abstract
Purpose: This study aimed to determine the survival outcome and prognostic factors of patients with nasopharyngeal cancer accessing treatment in Yogyakarta, Indonesia., Methods: Data on 759 patients with NPC diagnosed from 2007 to 2016 at Dr Sardjito General Hospital were included. Potential prognostic variables included sociodemographic, clinicopathology and treatment parameters. Multivariable analyses were implemented using semi-parametric Cox proportional hazards modelling and fully parametric survival analysis., Results: The median time of observation was 14.39 months. In the whole cohort the median observed survival was 31.08 months. In the univariable analysis, age, education status, insurance type, BMI, ECOG index, stage and treatment strategy had an impact on overall survival (OS) (p values <0.01). Semi-parametric multivariable analyses with stage stratification showed that education status, ECOG index, and treatment modality were independent prognostic factors for OS (p values <0.05). In the fully parametric models age, education status, ECOG index, stage, and treatment modality were independent prognostic factors for OS (p values <0.05). For both multivariable analyses, all treatment strategies were associated with a reduced hazard (semi-parametric models, p values <0.05) and a better OS (parametric models, p values <0.05) compared with no treatment. Furthermore, compared with radiation alone or chemotherapy alone, a combination of chemotherapy and radiation either in a form of concurrent chemoradiotherapy (CCRT), sequential chemotherapy and radiation, or induction chemotherapy followed by CCRT demonstrated a reduced hazard (hazard ratio/HR 0.226, 95% confidence interval/CI 0.089-0.363, and HR 0.390, 95%CI 0.260-0.519) and a better OS (time ratio/TR 3.108, 95%CI 1.274-4.942 and TR 2.531, 95%CI 1.829-3.233) (p values < 0.01)., Conclusions: Median OS for the cohort was low compared to those reported in both endemic and non-endemic regions. By combining the findings of multivariable analyses, we showed that age, education status, ECOG index, stage and first treatment modality were independent predictors for the OS., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2021
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19. Modulation of Poly ADP Ribose Polymerase (PARP) Levels and Activity by Alcohol Binge-Like Drinking in Male Mice.
- Author
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Vallerini GP, Cheng YH, Chase KA, Sharma RP, Kusumo H, Khakhkhar S, Feinstein DL, Guizzetti M, and Gavin DP
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- Alcohol Drinking, Animals, Ethanol, Male, Mice, Mice, Inbred C57BL, Poly (ADP-Ribose) Polymerase-1, Poly(ADP-ribose) Polymerase Inhibitors pharmacology, Poly(ADP-ribose) Polymerases, Alcoholism, Binge Drinking
- Abstract
Binge drinking is a frequent pattern of ethanol consumption within Alcohol Use Disorders (AUDs). Binge-like ethanol exposure increases Poly(ADP-ribose) polymerase (PARP) expression and activity. PARP enzymes have been implicated in addiction and serve multiple roles in the cell, including gene expression regulation. In this study, we examined the effects of binge-like alcohol consumption in the prefrontal cortex (PFC) of adult C57BL/6J male mice via a 4-day Drinking-in-the-Dark (DID) paradigm. The role of PARP in associated gene expression and behavioral changes was assessed by administering the PARP inhibitor ABT-888 on the last DID day. We then conducted an RNA-seq analysis of the PFC gene expression changes associated with DID-consumed ethanol or ABT-888 treatment. A separate cohort of mice was inoculated with an HSV-PARP1 vector in the PFC and subject to a DID experiment to verify whether overexpressed PARP1 increased ethanol drinking. We confirmed that alcohol increases Parp1 gene expression and PARP activity in the PFC. RNA-seq showed significantly altered expression of 41 genes by DID-consumed ethanol, and of 48 genes by ABT-888. These results were confirmed by qPCR in 7 of the 10 genes validated, 4 of which have been previously associated with addiction. ABT-888 reduced, and overexpression of PFC PARP1 increased DID ethanol consumption. In our model, alcohol binge drinking induced specific alterations in the PFC expression of genes potentially involved in addiction. Pharmacological PARP inhibition proved effective in reversing these changes and preventing further alcohol consumption. Our results suggest an involvement of ethanol-induced PARP1 in reinforcing binge-like addictive behavior., (Published by Elsevier Ltd.)
- Published
- 2020
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20. Neuroimmune and epigenetic involvement in adolescent binge ethanol-induced loss of basal forebrain cholinergic neurons: Restoration with voluntary exercise.
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Vetreno RP, Bohnsack JP, Kusumo H, Liu W, Pandey SC, and Crews FT
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- Animals, Basal Forebrain physiopathology, Binge Drinking genetics, Disease Models, Animal, Epigenesis, Genetic genetics, Male, Rats, Wistar, Basal Forebrain drug effects, Binge Drinking physiopathology, Cholinergic Neurons drug effects, Epigenesis, Genetic drug effects, Ethanol pharmacology, Motor Activity physiology
- Abstract
Binge drinking and alcohol abuse are common during adolescence and cause lasting pathology. Preclinical rodent studies using the adolescent intermittent ethanol (AIE; 5.0 g/kg, i.g., 2-day on/2-day off from postnatal day [P]25 to P55) model of human adolescent binge drinking report decreased basal forebrain cholinergic (ie, ChAT+) neurons that persist into adulthood (ie, P56-P220). Recent studies link AIE-induced neuroimmune activation to cholinergic pathology, but the underlying molecular mechanisms contributing to the persistent loss of basal forebrain ChAT+ neurons are unknown. We report here that the AIE-induced loss of cholinergic neuron markers (ie, ChAT, TrkA, and p75
NTR ), cholinergic neuron shrinkage, and increased expression of the neuroimmune marker pNF-κB p65 are restored by exercise exposure from P56 to P95 after AIE. Our data reveal that persistently reduced expression of cholinergic neuron markers following AIE is because of the loss of the cholinergic neuron phenotype most likely through an epigenetic mechanism involving DNA methylation and histone 3 lysine 9 dimethylation (H3K9me2). Adolescent intermittent ethanol caused a persistent increase in adult H3K9me2 and DNA methylation at promoter regions of Chat and H3K9me2 of Trka, which was restored by wheel running. Exercise also restored the AIE-induced reversal learning deficits on the Morris water maze. Together, these data suggest that AIE-induced adult neuroimmune signaling and cognitive deficits are linked to suppression of Chat and Trka gene expression through epigenetic mechanisms that can be restored by exercise. Exercise restoration of the persistent AIE-induced phenotypic loss of cholinergic neurons via epigenetic modifications is novel mechanism of neuroplasticity., (© 2019 The Authors Addiction Biology published by John Wiley & Sons Ltd on behalf of Society for the Study of Addiction.)- Published
- 2020
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21. Transcriptome analysis of alcohol-treated microglia reveals downregulation of beta amyloid phagocytosis.
- Author
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Kalinin S, González-Prieto M, Scheiblich H, Lisi L, Kusumo H, Heneka MT, Madrigal JLM, Pandey SC, and Feinstein DL
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- Amyloid beta-Peptides antagonists & inhibitors, Animals, Animals, Newborn, Cells, Cultured, Down-Regulation drug effects, Female, Male, Microglia drug effects, Peptide Fragments antagonists & inhibitors, Phagocytosis drug effects, RNA, Messenger antagonists & inhibitors, RNA, Messenger metabolism, Rats, Rats, Sprague-Dawley, Amyloid beta-Peptides metabolism, Down-Regulation physiology, Ethanol toxicity, Gene Expression Profiling methods, Microglia metabolism, Peptide Fragments metabolism, Phagocytosis physiology
- Abstract
Background: Microglial activation contributes to the neuropathology associated with chronic alcohol exposure and withdrawal, including the expression of inflammatory and anti-inflammatory genes. In the current study, we examined the transcriptome of primary rat microglial cells following incubation with alcohol alone, or alcohol together with a robust inflammatory stimulus., Methods: Primary microglia were prepared from mixed rat glial cultures. Cells were incubated with 75 mM ethanol alone or with proinflammatory cytokines ("TII": IL1β, IFNγ, and TNFα). Isolated mRNA was used for RNAseq analysis and qPCR. Effects of alcohol on phagocytosis were determined by uptake of oligomeric amyloid beta., Results: Alcohol induced nitrite production in control cells and increased nitrite production in cells co-treated with TII. RNAseq analysis of microglia exposed for 24 h to alcohol identified 312 differentially expressed mRNAs ("Alc-DEs"), with changes confirmed by qPCR analysis. Gene ontology analysis identified phagosome as one of the highest-ranking KEGG pathways including transcripts regulating phagocytosis. Alcohol also increased several complement-related mRNAs that have roles in phagocytosis, including C1qa, b, and c; C3; and C3aR1. RNAseq analysis identified over 3000 differentially expressed mRNAs in microglia following overnight incubation with TII; and comparison to the group of Alc-DEs revealed 87 mRNAs modulated by alcohol but not by TII, including C1qa, b, and c. Consistent with observed changes in phagocytosis-related mRNAs, the uptake of amyloid beta
1-42 , by primary microglia, was reduced by alcohol., Conclusions: Our results define alterations that occur to microglial gene expression following alcohol exposure and suggest that alcohol effects on phagocytosis could contribute to the development of Alzheimer's disease.- Published
- 2018
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22. Ethanol-induced changes in poly (ADP ribose) polymerase and neuronal developmental gene expression.
- Author
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Gavin DP, Kusumo H, Sharma RP, and Guizzetti M
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- Animals, Brain-Derived Neurotrophic Factor metabolism, Cells, Cultured, DNA Methylation drug effects, DNA Methylation physiology, Fetal Alcohol Spectrum Disorders enzymology, Gene Expression Regulation, Developmental drug effects, Genes, Developmental drug effects, Kruppel-Like Factor 4, Kruppel-Like Transcription Factors metabolism, Mice, Neuroprotective Agents pharmacology, PPAR gamma metabolism, Poly(ADP-ribose) Polymerase Inhibitors pharmacology, Proto-Oncogene Proteins c-myc metabolism, RNA, Messenger metabolism, Ethanol toxicity, Neurons drug effects, Neurons metabolism, Poly(ADP-ribose) Polymerases metabolism
- Abstract
Prenatal alcohol exposure has profound effects on neuronal growth and development. Poly-ADP Ribose Polymerase (PARP) enzymes are perhaps unique in the field of epigenetics in that they directly participate in histone modifications, transcription factor modifications, DNA methylation/demethylation and are highly inducible by ethanol. It was our hypothesis that ethanol would induce PARP enzymatic activity leading to alterations in neurodevelopmental gene expression. Mouse E18 cortical neurons were treated with ethanol, PARP inhibitors, and nuclear hormone receptor transcription factor PPARγ agonists and antagonists. Subsequently, we measured PARP activity and changes in Bdnf, OKSM (Oct4, Klf4, Sox2, c-Myc), DNA methylating/demethylating factors, and Pparγ mRNA expression, promoter 5-methylcytosine (5MC) and 5-hydroxymethylcytosine (5HMC), and PPARγ promoter binding. We found that ethanol reduced Bdnf4, 9a, and Klf4 mRNA expression, and increased c-Myc expression. These changes were reversed with a PARP inhibitor. In agreement with its role in DNA demethylation PARP inhibition increased 5MC levels at the c-Myc promoter. In addition, we found that inhibition of PARP enzymatic activity increased PPARγ promoter binding, and this corresponded to increased Bdnf and Klf4 mRNA expression. Our results suggest that PARP participates in DNA demethylation and reduces PPARγ promoter binding. The current study underscores the importance of PARP in ethanol-induced changes to neurodevelopmental gene expression., Competing Interests: The authors have no conflicts of interest to disclose., (Published by Elsevier Ltd.)
- Published
- 2016
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23. Role of Growth Arrest and DNA Damage-Inducible, Beta in Alcohol-Drinking Behaviors.
- Author
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Gavin DP, Kusumo H, Zhang H, Guidotti A, and Pandey SC
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- Animals, Antigens, Differentiation analysis, Brain-Derived Neurotrophic Factor metabolism, Brain-Derived Neurotrophic Factor physiology, Epigenesis, Genetic, Male, Mice, Mice, Inbred C57BL, Mice, Inbred DBA, Mice, Knockout, Nucleus Accumbens chemistry, Reverse Transcriptase Polymerase Chain Reaction, Alcohol Drinking physiopathology, Antigens, Differentiation physiology
- Abstract
Background: The contribution of epigenetic factors, such as histone acetylation and DNA methylation, to the regulation of alcohol-drinking behavior has been increasingly recognized over the last several years. GADD45b is a protein demonstrated to be involved in DNA demethylation at neurotrophic factor gene promoters, including at brain-derived neurotrophic factor (Bdnf) which has been highly implicated in alcohol-drinking behavior., Methods: DNA methyltransferase-1 (Dnmt1), 3a, and 3b, and Gadd45a, b, and g mRNA were measured in the nucleus accumbens (NAc) and ventral tegmental areas of high ethanol (EtOH) consuming C57BL/6J (C57) and low alcohol consuming DBA/2J (DBA) mice using quantitative reverse transcriptase polymerase chain reaction (PCR). In the NAc, GADD45b protein was measured via immunohistochemistry and Bdnf9a mRNA using in situ PCR. Bdnf9a promoter histone H3 acetylated at lysines 9 and 14 (H3K9,K14ac) was measured using chromatin immunoprecipitation, and 5-methylcytosine (5MC) and 5-hydroxymethylcytosine (5HMC) using methylated DNA immunoprecipitation. Alcohol-drinking behavior was evaluated in Gadd45b haplodeficient (+/-) and null mice (-/-) utilizing drinking-in-the-dark (DID) and 2-bottle free-choice paradigms., Results: C57 mice had lower levels of Gadd45b and g mRNA and GADD45b protein in the NAc relative to the DBA strain. C57 mice had lower NAc shell Bdnf9a mRNA levels, Bdnf9a promoter H3K9,K14ac, and higher Bdnf9a promoter 5HMC and 5MC. Acute EtOH increased GADD45b protein, Bdnf9a mRNA, and histone acetylation and decreased 5HMC in C57 mice. Gadd45b +/- mice displayed higher drinking behavior relative to wild-type littermates in both DID and 2-bottle free-choice paradigms., Conclusions: These data indicate the importance of the DNA demethylation pathway and its interactions with histone posttranslational modifications in alcohol-drinking behavior. Further, we suggest that lower DNA demethylation protein GADD45b levels may affect Bdnf expression possibly leading to altered alcohol-drinking behavior., (Copyright © 2016 by the Research Society on Alcoholism.)
- Published
- 2016
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24. Gadd45b and N-methyl-D-aspartate induced DNA demethylation in postmitotic neurons.
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Gavin DP, Kusumo H, Sharma RP, Guizzetti M, Guidotti A, and Pandey SC
- Subjects
- 5-Methylcytosine metabolism, Animals, Brain-Derived Neurotrophic Factor genetics, Cell Cycle Proteins metabolism, Cells, Cultured, Cerebral Cortex cytology, Cerebral Cortex metabolism, Mice, Nuclear Proteins metabolism, Promoter Regions, Genetic, Pyramidal Cells drug effects, Brain-Derived Neurotrophic Factor metabolism, Cell Cycle Proteins genetics, DNA Methylation, Excitatory Amino Acid Agonists pharmacology, N-Methylaspartate pharmacology, Nuclear Proteins genetics, Pyramidal Cells metabolism
- Abstract
Aim: In nondividing neurons examine the role of Gadd45b in active 5-methylcytosine (5MC) and 5-hydroxymethylcytosine (5HMC) removal at a gene promoter highly implicated in mental illnesses and cognition, Bdnf., Materials & Methods: Mouse primary cortical neuronal cultures with and without Gadd45b siRNA transfection were treated with N-methyl-d-aspartate (NMDA). Expression changes of genes reportedly involved in DNA demethylation, Bdnf mRNA and protein and 5MC and 5HMC at Bdnf promoters were measured., Results: Gadd45b siRNA transfection in neurons abolishes the NMDA-induced increase in Bdnf IXa mRNA and reductions in 5MC and 5HMC at the Bdnf IXa promoter., Conclusion: These results contribute to our understanding of DNA demethylation mechanisms in neurons, and its role in regulating NMDA responsive genes implicated in mental illnesses.
- Published
- 2015
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25. Arylsulfatase B modulates neurite outgrowth via astrocyte chondroitin-4-sulfate: dysregulation by ethanol.
- Author
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Zhang X, Bhattacharyya S, Kusumo H, Goodlett CR, Tobacman JK, and Guizzetti M
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- Animals, Astrocytes metabolism, Brain drug effects, Brain growth & development, Brain metabolism, Cells, Cultured, Glycosaminoglycans metabolism, Neurites metabolism, Neurogenesis drug effects, Neurogenesis physiology, Neurons metabolism, Rats, Rats, Sprague-Dawley, Astrocytes drug effects, Chondroitin Sulfate Proteoglycans drug effects, Chondroitin Sulfates metabolism, Ethanol pharmacology, N-Acetylgalactosamine-4-Sulfatase pharmacology, Neurites drug effects
- Abstract
In utero ethanol exposure causes fetal alcohol spectrum disorders, associated with reduced brain plasticity; the mechanisms of these effects are not well understood, particularly with respect to glial involvement. Astrocytes release factors that modulate neurite outgrowth. We explored the hypothesis that ethanol inhibits neurite outgrowth by increasing the levels of inhibitory chondroitin sulfate proteoglycans (CSPGs) in astrocytes. Astrocyte treatment with ethanol inhibited the activity of arylsulfatase B (ARSB), the enzyme that removes sulfate groups from chondroitin-4-sulfate (C4S) and triggers the degradation of C4S, increased total sulfated glycosaminoglycans (GAGs), C4S, and neurocan core-protein content and inhibited neurite outgrowth in neurons cocultured with ethanol-treated astrocytes in vitro, effects reversed by treatment with recombinant ARSB. Ethanol also inhibited ARSB activity and increased sulfate GAG and neurocan levels in the developing hippocampus after in vivo ethanol exposure. ARSB silencing increased the levels of sulfated GAGs, C4S, and neurocan in astrocytes and inhibited neurite outgrowth in cocultured neurons, indicating that ARSB activity directly regulates C4S and affects neurocan expression. In summary, this study reports two major findings: ARSB modulates sulfated GAG and neurocan levels in astrocytes and astrocyte-mediated neurite outgrowth in cocultured neurons; and ethanol inhibits the activity of ARSB, increases sulfated GAG, C4S, and neurocan levels, and thereby inhibits astrocyte-mediated neurite outgrowth. An unscheduled increase in CSPGs in the developing brain may lead to altered brain connectivity and to premature decrease in neuronal plasticity and therefore represents a novel mechanism by which ethanol can exert its neurodevelopmental effects., (Copyright © 2013 Wiley Periodicals, Inc.)
- Published
- 2014
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26. Regulation of DNA methylation by ethanol induces tissue plasminogen activator expression in astrocytes.
- Author
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Zhang X, Kusumo H, Sakharkar AJ, Pandey SC, and Guizzetti M
- Subjects
- Animals, Antimetabolites, Antineoplastic pharmacology, Astrocytes drug effects, Azacitidine analogs & derivatives, Azacitidine pharmacology, Blotting, Western, Cells, Cultured, DNA (Cytosine-5-)-Methyltransferases metabolism, DNA Methyltransferase 3A, Decitabine, Enzyme-Linked Immunosorbent Assay, Female, Gene Expression Regulation drug effects, Pregnancy, RNA biosynthesis, RNA genetics, RNA, Messenger biosynthesis, RNA, Messenger genetics, Rats, Rats, Sprague-Dawley, Astrocytes metabolism, Central Nervous System Depressants pharmacology, DNA Methylation drug effects, Ethanol pharmacology, Tissue Plasminogen Activator biosynthesis
- Abstract
Alcohol exposure affects neuronal plasticity in the adult and developing brain. Astrocytes play a major role in modulating neuronal plasticity and are a target of ethanol. Tissue plasminogen activator (tPA) is involved in modulating neuronal plasticity by degrading the extracellular matrix proteins including fibronectin and laminin and is up-regulated by ethanol in vivo. In this study we explored the hypothesis that ethanol affects DNA methylation in astrocytes thereby increasing expression and release of tPA. It was found that ethanol increased tPA mRNA levels, an effect mimicked by an inhibitor of DNA methyltransferase (DNMT) activity. Ethanol also increased tPA protein expression and release, and inhibited DNMT activity with a corresponding decrease in DNA methylation levels of the tPA promoter. Furthermore, it was observed that protein levels of DNMT3A, but not DNMT1, were reduced in astrocytes after ethanol exposure. These novel studies show that ethanol inhibits DNA methylation in astrocytes leading to increased tPA expression and release; this effect may be involved in astrocyte-mediated inhibition of neuronal plasticity by alcohol., (© 2013 International Society for Neurochemistry.)
- Published
- 2014
- Full Text
- View/download PDF
27. Cholesterol efflux is differentially regulated in neurons and astrocytes: implications for brain cholesterol homeostasis.
- Author
-
Chen J, Zhang X, Kusumo H, Costa LG, and Guizzetti M
- Subjects
- ATP Binding Cassette Transporter 1, ATP Binding Cassette Transporter, Subfamily G, Member 1, ATP-Binding Cassette Transporters metabolism, Animals, Biological Transport, Blotting, Western, Brain cytology, Cells, Cultured, Rats, Rats, Sprague-Dawley, Real-Time Polymerase Chain Reaction, Astrocytes metabolism, Brain metabolism, Cholesterol metabolism, Homeostasis, Neurons metabolism
- Abstract
Disruption of cholesterol homeostasis in the central nervous system (CNS) has been associated with neurological, neurodegenerative, and neurodevelopmental disorders. The CNS is a closed system with regard to cholesterol homeostasis, as cholesterol-delivering lipoproteins from the periphery cannot pass the blood-brain-barrier and enter the brain. Different cell types in the brain have different functions in the regulation of cholesterol homeostasis, with astrocytes producing and releasing apolipoprotein E and lipoproteins, and neurons metabolizing cholesterol to 24(S)-hydroxycholesterol. We present evidence that astrocytes and neurons adopt different mechanisms also in regulating cholesterol efflux. We found that in astrocytes cholesterol efflux is induced by both lipid-free apolipoproteins and lipoproteins, while cholesterol removal from neurons is triggered only by lipoproteins. The main pathway by which apolipoproteins induce cholesterol efflux is through ABCA1. By upregulating ABCA1 levels and by inhibiting its activity and silencing its expression, we show that ABCA1 is involved in cholesterol efflux from astrocytes but not from neurons. Furthermore, our results suggest that ABCG1 is involved in cholesterol efflux to apolipoproteins and lipoproteins from astrocytes but not from neurons, while ABCG4, whose expression is much higher in neurons than astrocytes, is involved in cholesterol efflux from neurons but not astrocytes. These results indicate that different mechanisms regulate cholesterol efflux from neurons and astrocytes, reflecting the different roles that these cell types play in brain cholesterol homeostasis. These results are important in understanding cellular targets of therapeutic drugs under development for the treatments of conditions associated with altered cholesterol homeostasis in the CNS., (Copyright © 2012 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
28. [EXPERIENCES WITH THE TREATMENT OF 3 CASES OF LUNG ASPERGILLOSIS].
- Author
-
MIYAMOTO N, KUSUMO H, OTSUKA K, MORI S, TSUNEISHI K, and HAMAZAKI Y
- Subjects
- Adolescent, Humans, Aminosalicylic Acid, Aminosalicylic Acids, Aspergillosis, Isonicotinic Acids, Kanamycin, Lung Diseases, Lung Diseases, Fungal, Pathology, Pulmonary Aspergillosis, Streptomycin, Surgical Procedures, Operative, Tuberculosis, Tuberculosis, Pulmonary
- Published
- 1963
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