46 results on '"Kumi Kaneko"'
Search Results
2. Correction: Correction: Gene expression and immunohistochemical analyses of mKast suggest its late pupal and adult-specific functions in the honeybee brain.
- Author
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Atsuhiro Yamane, Hiroki Kohno, Tsubomi Ikeda, Kumi Kaneko, Atsushi Ugajin, Toshiyuki Fujita, Takekazu Kunieda, and Takeo Kubo
- Subjects
Medicine ,Science - Abstract
[This corrects the article DOI: 10.1371/journal.pone.0183522.].
- Published
- 2017
- Full Text
- View/download PDF
3. Gene expression and immunohistochemical analyses of mKast suggest its late pupal and adult-specific functions in the honeybee brain.
- Author
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Atsuhiro Yamane, Hiroki Kohno, Tsubomi Ikeda, Kumi Kaneko, Atsushi Ugajin, Toshiyuki Fujita, Takekazu Kunieda, and Takeo Kubo
- Subjects
Medicine ,Science - Abstract
In insect brains, the mushroom bodies (MBs, a higher center) comprise intrinsic neurons, termed Kenyon cells (KCs). We previously showed that the honeybee (Apis mellifera L.) MBs comprise four types of KCs, in addition to the previously known three types of KCs: class I large-type KCs (lKCs), class I small-type KCs (sKCs) and class II KCs, novel class I 'middle-type' KCs (mKCs), which are characterized by the preferential expression of a gene, termed mKast. Although mKast was originally discovered during the search for genes whose expression is enriched in the optic lobes (OLs) in the worker brain, subsequent analysis revealed that the gene is expressed in an mKC-preferential manner in the MBs. To gain more insights into the function of mKast in the honeybee brain, we here performed expression analysis of mKast and immunohistochemistry of the mKast protein. Prominent mKast expression was first detected in the brain after the P7 pupal stage. In addition, mKast was expressed almost selectively in the brain, suggesting its late pupal and adult specific functions in the brain. Immunohistochemistry revealed that mKast-like immunoreactivity is detected in several regions in the worker brain: inside and around the MB calyces, at the outer edges of the OL lobula, at the outer surface of and posterior to the antennal lobes (ALs), along the dorsal midline of the anterior brain and at the outer surface of the subesophageal ganglions (SOG). mKast-like immunoreactivities in the MBs, OLs, ALs and SOG were due to the corresponding neurons, while mKast-like immunoreactivities beneath/between the MB calyces were assumed to most likely correspond to the lateral/medial neurosecretory cells.
- Published
- 2017
- Full Text
- View/download PDF
4. Novel middle-type Kenyon cells in the honeybee brain revealed by area-preferential gene expression analysis.
- Author
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Kumi Kaneko, Tsubomi Ikeda, Mirai Nagai, Sayaka Hori, Chie Umatani, Hiroto Tadano, Atsushi Ugajin, Takayoshi Nakaoka, Rajib Kumar Paul, Tomoko Fujiyuki, Kenichi Shirai, Takekazu Kunieda, Hideaki Takeuchi, and Takeo Kubo
- Subjects
Medicine ,Science - Abstract
The mushroom bodies (a higher center) of the honeybee (Apis mellifera L) brain were considered to comprise three types of intrinsic neurons, including large- and small-type Kenyon cells that have distinct gene expression profiles. Although previous neural activity mapping using the immediate early gene kakusei suggested that small-type Kenyon cells are mainly active in forager brains, the precise Kenyon cell types that are active in the forager brain remain to be elucidated. We searched for novel gene(s) that are expressed in an area-preferential manner in the honeybee brain. By identifying and analyzing expression of a gene that we termed mKast (middle-type Kenyon cell-preferential arrestin-related protein), we discovered novel 'middle-type Kenyon cells' that are sandwiched between large- and small-type Kenyon cells and have a gene expression profile almost complementary to those of large- and small-type Kenyon cells. Expression analysis of kakusei revealed that both small-type Kenyon cells and some middle-type Kenyon cells are active in the forager brains, suggesting their possible involvement in information processing during the foraging flight. mKast expression began after the differentiation of small- and large-type Kenyon cells during metamorphosis, suggesting that middle-type Kenyon cells differentiate by modifying some characteristics of large- and/or small-type Kenyon cells. Interestingly, CaMKII and mKast, marker genes for large- and middle-type Kenyon cells, respectively, were preferentially expressed in a distinct set of optic lobe (a visual center) neurons. Our findings suggested that it is not simply the Kenyon cell-preferential gene expression profiles, rather, a 'clustering' of neurons with similar gene expression profiles as particular Kenyon cell types that characterize the honeybee mushroom body structure.
- Published
- 2013
- Full Text
- View/download PDF
5. Correction: Novel Middle-Type Kenyon Cells in the Honeybee Brain Revealed by Area-Preferential Gene Expression Analysis.
- Author
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Kumi Kaneko, Tsubomi Ikeda, Mirai Nagai, Sayaka Hori, Chie Umatani, Hiroto Tadano, Atsushi Ugajin, Takayoshi Nakaoka, Rajib Kumar Paul, Tomoko Fujiyuki, Kenichi Shirai, Takekazu Kunieda, Hideaki Takeuchi, and Takeo Kubo
- Subjects
Medicine ,Science - Published
- 2013
- Full Text
- View/download PDF
6. In situ hybridization analysis of the expression of futsch, tau, and MESK2 homologues in the brain of the European honeybee (Apis mellifera L.).
- Author
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Kumi Kaneko, Sayaka Hori, Mai M Morimoto, Takayoshi Nakaoka, Rajib Kumar Paul, Tomoko Fujiyuki, Kenichi Shirai, Akiko Wakamoto, Satomi Tsuboko, Hideaki Takeuchi, and Takeo Kubo
- Subjects
Medicine ,Science - Abstract
BACKGROUND: The importance of visual sense in Hymenopteran social behavior is suggested by the existence of a Hymenopteran insect-specific neural circuit related to visual processing and the fact that worker honeybee brain changes morphologically according to its foraging experience. To analyze molecular and neural bases that underlie the visual abilities of the honeybees, we used a cDNA microarray to search for gene(s) expressed in a neural cell-type preferential manner in a visual center of the honeybee brain, the optic lobes (OLs). METHODOLOGY/PRINCIPAL FINDINGS: Expression analysis of candidate genes using in situ hybridization revealed two genes expressed in a neural cell-type preferential manner in the OLs. One is a homologue of Drosophila futsch, which encodes a microtubule-associated protein and is preferentially expressed in the monopolar cells in the lamina of the OLs. The gene for another microtubule-associated protein, tau, which functionally overlaps with futsch, was also preferentially expressed in the monopolar cells, strongly suggesting the functional importance of these two microtubule-associated proteins in monopolar cells. The other gene encoded a homologue of Misexpression Suppressor of Dominant-negative Kinase Suppressor of Ras 2 (MESK2), which might activate Ras/MAPK-signaling in Drosophila. MESK2 was expressed preferentially in a subclass of neurons located in the ventral region between the lamina and medulla neuropil in the OLs, suggesting that this subclass is a novel OL neuron type characterized by MESK2-expression. These three genes exhibited similar expression patterns in the worker, drone, and queen brains, suggesting that they function similarly irrespective of the honeybee sex or caste. CONCLUSIONS: Here we identified genes that are expressed in a monopolar cell (Amfutsch and Amtau) or ventral medulla-preferential manner (AmMESK2) in insect OLs. These genes may aid in visualizing neurites of monopolar cells and ventral medulla cells, as well as in analyzing the function of these neurons.
- Published
- 2010
- Full Text
- View/download PDF
7. Tree Trunk Inspection by GPR with Reflection and Transmission Measurements.
- Author
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Kazunori Takahashi, Kunio Aoike, Ken Kajino, Yayoi Ashiba, Kumi Kaneko, and Nobuaki Ishizawa
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- 2019
- Full Text
- View/download PDF
8. Tree Trunk Inspection by GPR with Reflection and Transmission Measurements
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Ken Kajino, Kunio Aoike, Kazunori Takahashi, Yayoi Ashiba, Kumi Kaneko, and Nobuaki Ishizawa
- Subjects
Tree (data structure) ,Microwave imaging ,Transmission (telecommunications) ,law ,Computer science ,Transmitter ,Ground-penetrating radar ,Tree trunk ,Reflection (physics) ,Radar ,law.invention ,Remote sensing - Abstract
Tree inspection is conducted to assess the risk of tree collapse and to maintain the safety. We have been using radar to non-invasively image the inside structure of tree trunk for the inspection. We established an efficient way of inspecting trees with radar. The first step employs the transmission measurements with one or two transmitter positions for the quick detection of decay and screening, and the second step uses reflection measurements for imaging and detailed inspection. The paper illustrates our strategy of the tree trunk inspection by radar and presents some measurement examples.
- Published
- 2019
9. Correction: Gene expression and immunohistochemical analyses of mKast suggest its late pupal and adult-specific functions in the honeybee brain
- Author
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Toshiyuki Fujita, Kumi Kaneko, Atsushi Ugajin, Takeo Kubo, Hiroki Kohno, Atsuhiro Yamane, Takekazu Kunieda, and Tsubomi Ikeda
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Retina ,animal structures ,Multidisciplinary ,media_common.quotation_subject ,lcsh:R ,Correction ,lcsh:Medicine ,In situ hybridization ,Insect ,Biology ,Negative stain ,Molecular biology ,eye diseases ,medicine.anatomical_structure ,Gene expression ,Mushroom bodies ,medicine ,Immunohistochemistry ,lcsh:Q ,lcsh:Science ,Gene ,media_common - Abstract
In insect brains, the mushroom bodies (MBs, a higher center) comprise intrinsic neurons, termed Kenyon cells (KCs). We previously showed that the honeybee (Apis mellifera L.) MBs comprise four types of KCs, in addition to the previously known three types of KCs: class I large-type KCs (lKCs), class I small-type KCs (sKCs) and class II KCs, novel class I ‘middle-type’ KCs (mKCs), which are characterized by the preferential expression of a gene, termed mKast. Although mKast was originally discovered during the search for genes whose expression is enriched in the optic lobes (OLs) in the worker brain, subsequent analysis revealed that the gene is expressed in an mKC-preferential manner in the MBs. To gain more insights into the function of mKast in the honeybee brain, we here performed expression analysis of mKast and immunohistochemistry of the mKast protein. Prominent mKast expression was first detected in the brain after the P7 pupal stage. In addition, mKast was expressed almost selectively in the brain, suggesting its late pupal and adult specific functions in the brain. Immunohistochemistry revealed that mKast-like immunoreactivity is detected in several regions in the worker brain: inside and around the MB calyces, at the outer edges of the OL lobula, at the outer surface of and posterior to the antennal lobes (ALs), along the dorsal midline of the anterior brain and at the outer surface of the subesophageal ganglions (SOG). mKast-like immunoreactivities in the MBs, OLs, ALs and SOG were due to the corresponding neurons, while mKast-like immunoreactivities beneath/between the MB calyces were assumed to most likely correspond to the lateral/medial neurosecretory cells.
- Published
- 2017
10. Intranuclear Aggregation of Mutant FUS/TLS as a Molecular Pathomechanism of Amyotrophic Lateral Sclerosis
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Shoji Watanabe, Koji Yamanaka, Yoshiaki Furukawa, Takao Nomura, Nobuyuki Nukina, and Kumi Kaneko
- Subjects
Amyloid ,Protein Denaturation ,Recombinant Fusion Proteins ,Mutant ,Protein aggregation ,Biology ,medicine.disease_cause ,Biochemistry ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Amino Acid Sequence ,skin and connective tissue diseases ,Molecular Biology ,Cells, Cultured ,Glutathione Transferase ,Cell Nucleus ,Neurons ,Mutation ,Microscopy, Confocal ,Amyotrophic Lateral Sclerosis ,Molecular Bases of Disease ,Cell Biology ,Molecular biology ,Rats ,Microscopy, Electron ,Cell nucleus ,medicine.anatomical_structure ,Amino Acid Substitution ,Cytoplasm ,RNA-Binding Protein FUS ,Electrophoresis, Polyacrylamide Gel ,sense organs ,Nuclear localization sequence - Abstract
Dominant mutations in FUS/TLS cause a familial form of amyotrophic lateral sclerosis (fALS), where abnormal accumulation of mutant FUS proteins in cytoplasm has been observed as a major pathological change. Many of pathogenic mutations have been shown to deteriorate the nuclear localization signal in FUS and thereby facilitate cytoplasmic mislocalization of mutant proteins. Several other mutations, however, exhibit no effects on the nuclear localization of FUS in cultured cells, and their roles in the pathomechanism of fALS remain obscure. Here, we show that a pathogenic mutation, G156E, significantly increases the propensities for aggregation of FUS in vitro and in vivo. Spontaneous in vitro formation of amyloid-like fibrillar aggregates was observed in mutant but not wild-type FUS, and notably, those fibrils functioned as efficient seeds to trigger the aggregation of wild-type protein. In addition, the G156E mutation did not disturb the nuclear localization of FUS but facilitated the formation of intranuclear inclusions in rat hippocampal neurons with significant cytotoxicity. We thus propose that intranuclear aggregation of FUS triggered by a subset of pathogenic mutations is an alternative pathomechanism of FUS-related fALS diseases.
- Published
- 2014
11. Accelerated Disease Onset with Stabilized Familial Amyotrophic Lateral Sclerosis (ALS)-linked Mutant TDP-43 Proteins*
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Koji Yamanaka, Kumi Kaneko, and Shoji Watanabe
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Time Factors ,TDP-43 ,Mutant ,medicine.disease_cause ,Biochemistry ,Mice ,Mutant protein ,Amyotrophic lateral sclerosis ,Age of Onset ,Regulation of gene expression ,Mutation ,Cell Death ,Protein Stability ,Molecular Bases of Disease ,Neurodegenerative Diseases ,Exons ,Middle Aged ,Transport protein ,DNA-Binding Proteins ,Protein Misfolding ,Protein Transport ,Onset of Disease ,Subcellular Fractions ,Adult ,Proteasome Endopeptidase Complex ,Detergents ,Molecular Sequence Data ,Biology ,mental disorders ,medicine ,Animals ,Humans ,Amino Acid Sequence ,RNA, Messenger ,Molecular Biology ,Aged ,Cell Nucleus ,Proteasome ,Amyotrophic Lateral Sclerosis ,nutritional and metabolic diseases ,Cell Biology ,medicine.disease ,Molecular biology ,nervous system diseases ,Proteostasis ,Gene Expression Regulation ,Solubility ,RNA ,Mutant Proteins ,ALS - Abstract
Background: Dominant mutations in TDP-43 cause familial ALS. Results: Longer half-lives of mutant TDP-43 proteins correlated with earlier disease onset, and stabilized TDP-43 provoked protein insolubility, cleavage, RNA dysregulation, and cytotoxicity. Conclusion: Increased stability of TDP-43 causes toxicity through abnormal proteostasis and RNA dysregulation. Significance: This is the first TDP-43 cell model based on genotype-phenotype correlation of ALS patients., Abnormal protein accumulation is a pathological hallmark of neurodegenerative diseases, including accumulation of TAR DNA-binding protein 43 (TDP-43) in amyotrophic lateral sclerosis (ALS). Dominant mutations in the TDP-43 gene are causative for familial ALS; however, the relationship between mutant protein biochemical phenotypes and disease course and their significance to disease pathomechanism are not known. Here, we found that longer half-lives of mutant proteins correlated with accelerated disease onset. Based on our findings, we established a cell model in which chronic stabilization of wild-type TDP-43 protein provoked cytotoxicity and recapitulated pathogenic protein cleavage and insolubility to the detergent Sarkosyl, TDP-43 properties that have been observed in sporadic ALS lesions. Furthermore, these cells showed proteasomal impairment and dysregulation of their own mRNA levels. These results suggest that chronically increased stability of mutant or wild-type TDP-43 proteins results in a gain of toxicity through abnormal proteostasis.
- Published
- 2012
12. Gene expression profiles and neural activities of Kenyon cell subtypes in the honeybee brain: identification of novel 'middle-type' Kenyon cells
- Author
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Kumi Kaneko, Shota Suenami, and Takeo Kubo
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0301 basic medicine ,Future studies ,Kenyon cell ,Honeybee ,Review ,mKast ,Biology ,Hymenopteran insect ,Novel gene ,03 medical and health sciences ,Neural activity ,0302 clinical medicine ,Expression pattern ,Gene expression ,Social behavior ,Foraging ,Neural activity mapping ,Brain ,Mushroom body ,030104 developmental biology ,Arrestin domain-containing protein ,Mushroom bodies ,Animal Science and Zoology ,Neuroscience ,Immediate early gene ,030217 neurology & neurosurgery - Abstract
In the honeybee (Apis mellifera L.), it has long been thought that the mushroom bodies, a higher-order center in the insect brain, comprise three distinct subtypes of intrinsic neurons called Kenyon cells. In class-I large-type Kenyon cells and class-I small-type Kenyon cells, the somata are localized at the edges and in the inner core of the mushroom body calyces, respectively. In class-II Kenyon cells, the somata are localized at the outer surface of the mushroom body calyces. The gene expression profiles of the large- and small-type Kenyon cells are distinct, suggesting that each exhibits distinct cellular characteristics. We recently identified a novel gene, mKast (middle-type Kenyon cell-preferential arrestin-related gene-1), which has a distinctive expression pattern in the Kenyon cells. Detailed expression analyses of mKast led to the discovery of novel ‘middle-type’ Kenyon cells characterized by their preferential mKast-expression in the mushroom bodies. The somata of the middle-type Kenyon cells are localized between the large- and small-type Kenyon cells, and the size of the middle-type Kenyon cell somata is intermediate between that of large- and small-type Kenyon cells. Middle-type Kenyon cells appear to differentiate from the large- and/or small-type Kenyon cell lineage(s). Neural activity mapping using an immediate early gene, kakusei, suggests that the small-type and some middle-type Kenyon cells are prominently active in the forager brain, suggesting a potential role in processing information during foraging flight. Our findings indicate that honeybee mushroom bodies in fact comprise four types of Kenyon cells with different molecular and cellular characteristics: the previously known class-I large- and small-type Kenyon cells, class-II Kenyon cells, and the newly identified middle-type Kenyon cells described in this review. As the cellular characteristics of the middle-type Kenyon cells are distinct from those of the large- and small-type Kenyon cells, their careful discrimination will be required in future studies of honeybee Kenyon cell subtypes. In this review, we summarize recent progress in analyzing the gene expression profiles and neural activities of the honeybee Kenyon cell subtypes, and discuss possible roles of each Kenyon cell subtype in the honeybee brain.
- Published
- 2016
13. Development of Multislit Submilli-Bubble Distributor for Gas Absorption
- Author
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Kumi Kaneko, Koichi Terasaka, Takashi Goshima, Satoko Fujioka, Daisuke Kobayashi, and Yoshihito Sasada
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Materials science ,General Chemical Engineering ,Bubble ,Analytical chemistry ,Distributor ,General Chemistry ,Absorption (electromagnetic radiation) - Published
- 2012
14. Molecular properties of TAR DNA binding protein-43 fragments are dependent upon its cleavage site
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Yoshiaki Furukawa, Nobuyuki Nukina, and Kumi Kaneko
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Recombinant Fusion Proteins ,Amino Acid Motifs ,Molecular Sequence Data ,Mutation, Missense ,TAR DNA-Binding Protein 43 ,Protein aggregation ,Frontotemporal lobar degeneration ,Cleavage (embryo) ,Mice ,chemistry.chemical_compound ,Cell Line, Tumor ,mental disorders ,Animals ,Humans ,Amino Acid Sequence ,Phosphorylation ,Molecular Biology ,Peptide sequence ,Inclusion Bodies ,RNA recognition motif ,Chemistry ,nutritional and metabolic diseases ,Amyotrophic lateral sclerosis ,Peptide Fragments ,nervous system diseases ,Transport protein ,DNA-Binding Proteins ,Protein Transport ,Solubility ,Biochemistry ,Proteolysis ,Mutagenesis, Site-Directed ,Molecular Medicine ,TAR DNA binding protein-43 ,DNA - Abstract
Aggregation of TAR DNA binding protein-43 (TDP-43) is a hallmark feature of amyotrophic lateral sclerosis and frontotemporal lobar degeneration. Under pathogenic conditions, abnormal cleavage of TDP-43 produces the phosphorylated C-terminal fragments (CTFs), which are enriched in neuronal inclusions; however, molecular properties of those TDP-43 fragments remain to be characterized. Here we show distinct degrees of solubility and phosphorylation among fragments truncated at different sites of TDP-43. Truncations were tested mainly within a second RNA recognition motif (RRM2) of TDP-43; when the truncation site was more C-terminal in an RRM2 domain, a TDP-43 CTF basically became less soluble and more phosphorylated in differentiated Neuro2a cells. We also found that cleavage at the third β-strand in RRM2 leads to the formation of SDS-resistant soluble oligomers. Molecular properties of TDP-43 fragments thus significantly depend upon its cleavage site, which might reflect distinct molecular pathologies among sub-types of TDP-43 proteinopathies.
- Published
- 2011
15. Tau Protein Assembles into Isoform- and Disulfide-dependent Polymorphic Fibrils with Distinct Structural Properties
- Author
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Nobuyuki Nukina, Yoshiaki Furukawa, and Kumi Kaneko
- Subjects
Gene isoform ,Protein Conformation ,Tau protein ,tau Proteins ,macromolecular substances ,Protein aggregation ,Fibril ,Biochemistry ,law.invention ,Protein structure ,Microscopy, Electron, Transmission ,law ,mental disorders ,Protein Isoforms ,Disulfides ,Molecular Biology ,biology ,Chemistry ,Disulfide bond ,Cell Biology ,Recombinant Proteins ,In vitro ,Kinetics ,Protein Structure and Folding ,Mutagenesis, Site-Directed ,Recombinant DNA ,Biophysics ,biology.protein - Abstract
Tauopathies are neurodegenerative diseases in which insoluble fibrillar aggregates of a microtubule-binding protein, Tau, are abnormally accumulated. Pathological Tau fibrils often exhibit structural polymorphisms that differ among phenotypically distinct tauopathies; however, a molecular mechanism to generate polymorphic Tau fibrils remains obscure. Here, we note the formation of a disulfide bond in isoforms of full-length Tau and show that the thiol-disulfide status as well as the isoform composition determines structural and morphological properties of Tau fibrils in vitro. Mainly two regions in a Tau primary sequence are found to act as structural blocks for building a protease-resistant core of Tau fibrils. Interactions among those two blocks for building a core structure depend upon the thiol-disulfide status in each isoform of Tau, which results in the formation of polymorphic fibrils with distinct structural properties. Furthermore, we have found that more diverse structures of Tau fibrils emerge through a cross-seeded fibrillation between heterologous pairs of Tau isoforms. We thus propose that isoform- and disulfide-dependent combinatorial interactions among multiple regions in a Tau sequence endow Tau fibrils with various structures, i.e. polymorphism.
- Published
- 2011
16. Mutation-dependent Polymorphism of Cu,Zn-Superoxide Dismutase Aggregates in the Familial Form of Amyotrophic Lateral Sclerosis
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Yoshiaki Furukawa, Koji Yamanaka, Nobuyuki Nukina, and Kumi Kaneko
- Subjects
Models, Molecular ,animal diseases ,SOD1 ,Protein aggregation ,Biochemistry ,Protein–protein interaction ,Superoxide dismutase ,Mice ,medicine ,Animals ,Amyotrophic lateral sclerosis ,Protein Structure, Quaternary ,Molecular Biology ,Genetics ,Polymorphism, Genetic ,Familial form ,biology ,Superoxide Dismutase ,Chemistry ,Amyotrophic Lateral Sclerosis ,nutritional and metabolic diseases ,Sarcosine ,Cell Biology ,medicine.disease ,nervous system diseases ,Solubility ,Polymorphism (materials science) ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Protein Structure and Folding ,Mutation ,biology.protein ,Biological Assay ,Mutant Proteins ,Protein folding - Abstract
More than 100 different mutations in Cu,Zn-superoxide dismutase (SOD1) are linked to a familial form of amyotrophic lateral sclerosis (fALS). Pathogenic mutations facilitate fibrillar aggregation of SOD1, upon which significant structural changes of SOD1 have been assumed; in general, however, a structure of protein aggregate remains obscure. Here, we have identified a protease-resistant core in wild-type as well as fALS-causing mutant SOD1 aggregates. Three different regions within an SOD1 sequence are found as building blocks for the formation of an aggregate core, and fALS-causing mutations modulate interactions among these three regions to form a distinct core, namely SOD1 aggregates exhibit mutation-dependent structural polymorphism, which further regulates biochemical properties of aggregates such as solubility. Based upon these results, we propose a new pathomechanism of fALS in which mutation-dependent structural polymorphism of SOD1 aggregates can affect disease phenotypes.
- Published
- 2010
17. Cross-Seeding Fibrillation of Q/N-Rich Proteins Offers New Pathomechanism of Polyglutamine Diseases
- Author
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Masaru Kurosawa, Yoshiaki Furukawa, Kumi Kaneko, Nobuyuki Nukina, and Gen Matsumoto
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congenital, hereditary, and neonatal diseases and abnormalities ,Huntingtin ,Glutamine ,Intranuclear Inclusion Bodies ,Mice, Transgenic ,Nerve Tissue Proteins ,RNA-binding protein ,Biology ,Mice ,Protein structure ,Cell Line, Tumor ,mental disorders ,Huntingtin Protein ,Animals ,Humans ,Nuclear protein ,Cells, Cultured ,General Neuroscience ,Nuclear Proteins ,RNA-Binding Proteins ,Articles ,Polyglutamine tract ,Protein Structure, Tertiary ,nervous system diseases ,Transport protein ,Cell biology ,Disease Models, Animal ,Protein Transport ,Huntington Disease ,Solubility ,nervous system ,Biochemistry ,Asparagine ,Peptides ,Intracellular - Abstract
A pathological hallmark of the Huntington's disease (HD) is intracellular inclusions containing a huntingtin (Htt) protein with an elongated polyglutamine tract. Aggregation of mutant Htt causes abnormal protein–protein interactions, and the functional dysregulation of aggregate-interacting proteins (AIPs) has been proposed as a pathomechanism of HD. Despite this, a molecular mechanism remains unknown how Htt aggregates sequester AIPs. We note an RNA-binding protein, TIA-1, as a model of AIPs containing a Q/N-rich sequence and suggest thatin vitroandin vivoHtt fibrillar aggregates function as a structural template for inducing insoluble fibrillation of TIA-1. It is also plausible that such a cross-seeding activity of Htt aggregates represses the physiological function of TIA-1. We thus propose that Htt aggregates act as an intracellular hub for the cross-seeded fibrillation of Q/N-rich AIPs and that a cross-seeding reaction is a molecular origin to cause diverse pathologies in a polyglutamine disease.
- Published
- 2009
18. Complete Loss of Post-translational Modifications Triggers Fibrillar Aggregation of SOD1 in the Familial Form of Amyotrophic Lateral Sclerosis
- Author
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Koji Yamanaka, Yoshiaki Furukawa, Kumi Kaneko, Nobuyuki Nukina, and Thomas V. O'Halloran
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animal diseases ,Transgene ,SOD1 ,Mice, Transgenic ,Biochemistry ,Cell Line ,Superoxide dismutase ,Mice ,Superoxide Dismutase-1 ,Protein structure ,In vivo ,medicine ,Animals ,Humans ,Disulfides ,Molecular Biology ,biology ,Superoxide Dismutase ,Chemistry ,Amyotrophic Lateral Sclerosis ,Neurodegeneration ,Genetic Diseases, Inborn ,nutritional and metabolic diseases ,Cell Biology ,medicine.disease ,Protein Structure, Tertiary ,nervous system diseases ,Cell biology ,Zinc ,nervous system ,Chaperone (protein) ,Protein Structure and Folding ,Mutation ,biology.protein ,Copper ,Intracellular ,Molecular Chaperones ,Protein Modification, Translational - Abstract
Dominant mutations in Cu,Zn-superoxide dismutase (SOD1) cause a familial form of amyotrophic lateral sclerosis (fALS), and aggregation of mutant SOD1 has been proposed to play a role in neurodegeneration. A growing body of evidence suggests that fALS-causing mutations destabilize the native structure of SOD1, leading to aberrant protein interactions for aggregation. SOD1 becomes stabilized and enzymatically active after copper and zinc binding and intramolecular disulfide formation, but it remains unknown which step(s) in the SOD1 maturation process is important in the pathological aggregation. In this study we have shown that apoSOD1 without disulfide is the most facile state for formation of amyloid-like fibrillar aggregates. fALS mutations impair either zinc binding, disulfide formation, or both, leading to accumulation of the aggregation-prone, apo, and disulfide-reduced SOD1. Moreover, we have found that the copper chaperone for SOD1 (CCS) facilitates maturation of SOD1 and that CCS overexpression ameliorates intracellular aggregation of mutant SOD1 in vivo. Based on our in vivo and in vitro results, we propose that facilitation of post-translational modifications is a promising strategy to reduce SOD1 aggregation in the cell.
- Published
- 2008
19. Membrane microdomain switching: a regulatory mechanism of amyloid precursor protein processing
- Author
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Misako Okuno, Tsutomu Hashikawa, Takumi Akagi, Taku Kashiyama, Takashi Sakurai, Kumi Kaneko, Hideaki Shimizu, Koji Wada, and Nobuyuki Nukina
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endocrine system ,Prions ,Detergents ,Syntaxin 1 ,Nerve Tissue Proteins ,Cleavage (embryo) ,Article ,Polyethylene Glycols ,Amyloid beta-Protein Precursor ,Mice ,Membrane Microdomains ,Munc18 Proteins ,mental disorders ,Amyloid precursor protein ,Syntaxin ,Animals ,Aspartic Acid Endopeptidases ,Humans ,Research Articles ,Adaptor Proteins, Signal Transducing ,Neurons ,biology ,Cyclin-dependent kinase 5 ,Lipid microdomain ,Cyclin-Dependent Kinase 5 ,Cell Biology ,Cell biology ,Rats ,Cholesterol ,nervous system ,biology.protein ,Phosphorylation ,Thy-1 Antigens ,Amyloid Precursor Protein Secretases ,Amyloid precursor protein secretase ,Protein Processing, Post-Translational ,Subcellular Fractions - Abstract
Neuronal activity has an impact on beta cleavage of amyloid precursor protein (APP) by BACE1 to generate amyloid-beta peptide (Abeta). However, the molecular mechanisms underlying this effect remain to be elucidated. Cholesterol dependency of beta cleavage prompted us to analyze immunoisolated APP-containing detergent-resistant membranes from rodent brains. We found syntaxin 1 as a key molecule for activity-dependent regulation of APP processing in cholesterol-dependent microdomains. In living cells, APP associates with syntaxin 1-containing microdomains through X11-Munc18, which inhibits the APP-BACE1 interaction and beta cleavage via microdomain segregation. Phosphorylation of Munc18 by cdk5 causes a shift of APP to BACE1-containing microdomains. Neuronal hyperactivity, implicated in Abeta overproduction, promotes the switching of APP microdomain association as well as beta cleavage in a partially cdk5-dependent manner. We propose that microdomain switching is a mechanism of cholesterol- and activity-dependent regulation of APP processing in neurons.
- Published
- 2008
20. BACE1 modulates filopodia-like protrusions induced by sodium channel β4 subunit
- Author
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Haruko Miyazaki, Nobuyuki Nukina, Fumitaka Oyama, Takashi Sakurai, Akira Tamaoka, Kumi Kaneko, and Hon Kit Wong
- Subjects
animal structures ,Neurite ,Protein subunit ,Molecular Sequence Data ,Biophysics ,Biology ,Biochemistry ,Sodium Channels ,Pathogenesis ,Mice ,Cell Line, Tumor ,mental disorders ,Neurites ,Animals ,Aspartic Acid Endopeptidases ,Amino Acid Sequence ,Pseudopodia ,Molecular Biology ,Peptide sequence ,Voltage-Gated Sodium Channel beta-4 Subunit ,urogenital system ,Cell adhesion molecule ,Sodium channel ,Cell Biology ,Cell biology ,Cell culture ,ComputingMethodologies_DOCUMENTANDTEXTPROCESSING ,Amyloid Precursor Protein Secretases ,biological phenomena, cell phenomena, and immunity ,Filopodia ,hormones, hormone substitutes, and hormone antagonists - Abstract
application/pdf, Processing of APP by BACE1 plays a crucial role in the pathogenesis of Alzheimer disease (AD). Recently, the voltage-gated sodium channel (Nav) β4 subunit (β4), an auxiliary subunit of Nav that is supposed to serve as a cell adhesion molecule, has been identified as a substrate for BACE1. However, the biological consequence of BACE1 processing of β4 remains illusive. Here, we report the biological effects of β4 processing by BACE1. Overexpression of β4 in Neuro2a cells promoted neurite extension and increased the number of F-actin rich filopodia-like protrusions. While coexpression of BACE1 together with β4 further accelerated neurite extension, the number of filopodia-like protrusions was reduced. Overexpression of C-terminal fragment of β4 that was generated by BACE1 (β4-CTF) partially recapitulated the results obtained with BACE1 overexpression. These results suggest that the processing of β4 by BACE1 regulates neurite length and filopodia-like protrusion density in neurons.
- Published
- 2007
21. [Analysis of the molecular and neural bases underlying the honeybee 'waggle dance']
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Kumi, Kaneko and Takeo, Kubo
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Neurons ,Behavior, Animal ,Animals ,Brain ,Bees ,Dancing ,Motor Activity - Published
- 2014
22. The analgesic effect of tramadol in animal models of neuropathic pain and fibromyalgia
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Ken Okamoto, Takashi Homan, Michiko Oka, Kumi Kaneko, Tatsuya Oyama, and Masato Umehara
- Subjects
Male ,Fibromyalgia ,medicine.drug_class ,Analgesic ,(+)-Naloxone ,Pharmacology ,Rats, Sprague-Dawley ,medicine ,Animals ,Tramadol ,Pain Measurement ,business.industry ,General Neuroscience ,Chronic pain ,medicine.disease ,Rats ,Analgesics, Opioid ,Disease Models, Animal ,Allodynia ,Opioid ,Anesthesia ,Neuropathic pain ,Neuralgia ,medicine.symptom ,Chronic Pain ,business ,Opioid antagonist ,medicine.drug - Abstract
(±)-Tramadol hydrochloride (tramadol) is a widely used analgesic for the treatment of cancer pain and chronic pain. Although many animal studies have shown antinociceptive effects of tramadol in both acute and chronic pain, little is known about the effect of tramadol in putative animal models of fibromyalgia. In this study, we compared the antiallodynic effects of oral administration of tramadol in two kinds of rat chronic pain models, neuropathic pain induced by partial sciatic nerve ligation (PSL) and reserpine-induced myalgia (RIM). In PSL rats, the threshold for responses induced by tactile stimulation with von Frey filaments was significantly decreased seven days after the operation, suggesting that the operation induced tactile allodynia. Orally administered tramadol showed a potent and dose-dependent antiallodynic effect on PSL-induced allodynia. In RIM rats, the threshold was significantly decreased five days after reserpine treatment. Orally administered tramadol also attenuated reserpine-induced tactile allodynia. To explore the mechanism of the antiallodynic effect of tramadol in RIM rats, we investigated the effect of the opioid antagonist naloxone on the tramadol-induced analgesic effect in these rats. The effect of tramadol was partially antagonized by naloxone, suggesting that the opioid receptor is involved at least in part in the antiallodynic effect of tramadol in RIM rats. These data indicate that orally administered tramadol produced improvement in both PSL rats and RIM rats at similar doses and provide evidence that the opioid system is partly involved in the analgesic effect of tramadol in RIM rats.
- Published
- 2013
23. Novel middle-type Kenyon cells in the honeybee brain revealed by area-preferential gene expression analysis
- Author
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Takeo Kubo, Sayaka Hori, Kumi Kaneko, Tsubomi Ikeda, Tomoko Fujiyuki, Hideaki Takeuchi, Takayoshi Nakaoka, Rajib Kumar Paul, Takekazu Kunieda, Mirai Nagai, Chie Umatani, Kenichi Shirai, Hiroto Tadano, and Atsushi Ugajin
- Subjects
Kenyon cell ,Anatomy and Physiology ,media_common.quotation_subject ,Gene Expression ,lcsh:Medicine ,Biology ,Bioinformatics ,Neurological System ,Molecular Genetics ,Neural activity ,Behavioral Neuroscience ,Developmental Neuroscience ,Ca2+/calmodulin-dependent protein kinase ,Gene expression ,Molecular Cell Biology ,Genetics ,Animals ,Metamorphosis ,lcsh:Science ,Gene ,In Situ Hybridization, Fluorescence ,Mushroom Bodies ,Phylogeny ,media_common ,Oligonucleotide Array Sequence Analysis ,Neurons ,Multidisciplinary ,Arrestin ,Animal Behavior ,Reverse Transcriptase Polymerase Chain Reaction ,lcsh:R ,Brain ,Computational Biology ,Bees ,Cell biology ,Neuroanatomy ,Microscopy, Fluorescence ,Mushroom bodies ,Insect Proteins ,lcsh:Q ,Molecular Neuroscience ,Calcium-Calmodulin-Dependent Protein Kinase Type 2 ,Transcriptome ,Immediate early gene ,Zoology ,Entomology ,Research Article ,Neuroscience - Abstract
The mushroom bodies (a higher center) of the honeybee (Apis mellifera L) brain were considered to comprise three types of intrinsic neurons, including large- and small-type Kenyon cells that have distinct gene expression profiles. Although previous neural activity mapping using the immediate early gene kakusei suggested that small-type Kenyon cells are mainly active in forager brains, the precise Kenyon cell types that are active in the forager brain remain to be elucidated. We searched for novel gene(s) that are expressed in an area-preferential manner in the honeybee brain. By identifying and analyzing expression of a gene that we termed mKast (middle-type Kenyon cell-preferential arrestin-related protein), we discovered novel ‘middle-type Kenyon cells’ that are sandwiched between large- and small-type Kenyon cells and have a gene expression profile almost complementary to those of large– and small-type Kenyon cells. Expression analysis of kakusei revealed that both small-type Kenyon cells and some middle-type Kenyon cells are active in the forager brains, suggesting their possible involvement in information processing during the foraging flight. mKast expression began after the differentiation of small- and large-type Kenyon cells during metamorphosis, suggesting that middle-type Kenyon cells differentiate by modifying some characteristics of large– and/or small-type Kenyon cells. Interestingly, CaMKII and mKast, marker genes for large– and middle-type Kenyon cells, respectively, were preferentially expressed in a distinct set of optic lobe (a visual center) neurons. Our findings suggested that it is not simply the Kenyon cell-preferential gene expression profiles, rather, a ‘clustering’ of neurons with similar gene expression profiles as particular Kenyon cell types that characterize the honeybee mushroom body structure.
- Published
- 2013
24. Hydrogen(H2) treatment for acute erythymatous skin diseases. A report of 4 patients with safety data and a non-controlled feasibility study with H2 concentration measurement on two volunteers
- Author
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Kumi Kaneko, Yoji Nishijima, Hirohisa Ono, Jun Nakazawa, Atsunori Nakao, Yohei Kudo, Masaki Sakamoto, and Naoto Adachi
- Subjects
medicine.medical_specialty ,Erythema ,Inhalation ,business.industry ,Neuroscience (miscellaneous) ,Case Report ,Venous blood ,lcsh:RD78.3-87.3 ,Anesthesiology and Pain Medicine ,Intravenous fluid ,Blood chemistry ,lcsh:Anesthesiology ,Internal medicine ,Anesthesiology ,Heavy duty ,Anesthesia ,Medicine ,Sample collection ,medicine.symptom ,business - Abstract
Background We have treated 4 patients of acute erythematous skin diseases with fever and/or pain by H2 enriched intravenous fluid. We also added data from two volunteers for assessing the mode of H2 delivery to the skin for evaluation of feasibility of H2 treatment for this type of skin diseases. Methods All of the four patients received intravenous administration of 500 ml of H2 enriched fluid in 30 min for more than 3 days except in one patient for only once. From two volunteers (one for intravenous H2 administration and the other for H2 inhalation), blood samples were withdrawn serially and air samples were collected from a heavy duty plastic bag covering a leg, before, during and after H2 administration. These samples were checked for H2 concentration immediately by gas chromatography. Multiple physiological parameters and blood chemistry data were collected also. Results Erythema of these 4 patients and associated symptoms improved significantly after the H2 treatment and did not recur. Administration of H2 did not change physiological parameters and did not cause deterioration of the blood chemistry. The H2 concentration in the blood from the volunteers rapidly increased with H2 inhalation and slowly decreased with cessation of H2 particularly in the venous blood, while H2 concentration of the air from the surface of the leg showed much slower changes even after H2 inhalation was discontinued, at least during the time of sample collection. Conclusion An improvement in acute erythemtous skin diseases followed the administration of H2 enriched fluid without compromising the safety. The H2 delivery study of two volunteers suggested initial direct delivery and additional prolonged delivery possibly from a slowly desaturating reservoir in the skin to the surface.
- Published
- 2011
25. Improved brain MRI indices in the acute brain stem infarct sites treated with hydroxyl radical scavengers, Edaravone and hydrogen, as compared to Edaravone alone. A non-controlled study
- Author
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Shiroh Chitoku, Jun Nakazawa, Shigekuni Tachibana, Hiroshi Nawashiro, Kumi Kaneko, Shigeo Mukaihara, Yoji Nishijima, Yohei Kudo, Hirohisa Ono, Naoto Adachi, and Masaki Sakamoto
- Subjects
medicine.medical_specialty ,Neurology ,Cerebral infarction ,business.industry ,Radical ,Neuroscience (miscellaneous) ,Case Report ,medicine.disease ,Surgery ,lcsh:RD78.3-87.3 ,chemistry.chemical_compound ,Anesthesiology and Pain Medicine ,chemistry ,lcsh:Anesthesiology ,Internal medicine ,Brain mri ,medicine ,Cardiology ,Edaravone ,Hydroxyl radical ,Objective evaluation ,business ,Beneficial effects - Abstract
Background In acute stage of cerebral infarction, MRI indices (rDWI & rADC) deteriorate during the first 3-7 days after the ictus and then gradually normalize in approximately 10 days (pseudonormalization time), although the tissue is already infarcted. Since effective treatments improve these indices significantly and in less than the natural pseudonormalization time, a combined analysis of these changes provides an opportunity for objective evaluation on the effectiveness of various treatments for cerebral infarction. Hydroxyl radicals are highly destructive to the tissue and aggravate cerebral infarction. We treated brainstem infarction patients in acute stage with hydroxyl radical scavengers (Edaravone and hydrogen) by intravenous administration and evaluated the effects of the treatment by a serial observation and analysis of these MRI indices. The effects of the treatment were evaluated and compared in two groups, an Edaravone alone group and a combined group with Edaravone and hydrogen, in order to assess beneficial effects of addition of hydrogen. Methods The patients were divided in Edaravone only group (E group. 26 patients) and combined treatment group with Edaravone and hydrogen enriched saline (EH group. 8 patients). The extent of the initial hump of rDWI, the initial dip of rADC and pseudo-normalization time were determined in each patient serially and averages of these data were compared in these two groups and also with the natural course in the literatures. Results The initial hump of rDWI reached 2.0 in the E group which was better than 2.5 of the natural course but was not as good as 1.5 of the EH group. The initial dip of rADC was 0.6 in the E group which was close to the natural course but worse than 0.8 of the EH group. Pseudonormalization time of rDWI and rADC was 9 days only in EH group but longer in other groups. Addition of hydrogen caused no side effects. Conclusions Administration of hydroxyl radical scavengers in acute stage of brainstem infarction improved MRI indices against the natural course. The effects were more obvious and significant in the EH group. These findings may imply the need for more frequent daily administration of hydroxyl scavenger, or possible additional hydrogen effects on scavenger mechanisms.
- Published
- 2011
26. A seeding reaction recapitulates intracellular formation of Sarkosyl-insoluble transactivation response element (TAR) DNA-binding protein-43 inclusions
- Author
-
Yoshiaki Furukawa, Shoji Watanabe, Nobuyuki Nukina, Kumi Kaneko, and Koji Yamanaka
- Subjects
Response element ,Intranuclear Inclusion Bodies ,TAR DNA-Binding Protein 43 ,Protein aggregation ,Biology ,Response Elements ,Biochemistry ,Models, Biological ,Transduction (genetics) ,Transactivation ,mental disorders ,medicine ,Humans ,Nuclear protein ,Molecular Biology ,Neurodegeneration ,Amyotrophic Lateral Sclerosis ,nutritional and metabolic diseases ,Sarcosine ,Cell Biology ,medicine.disease ,Cell biology ,nervous system diseases ,DNA-Binding Proteins ,HEK293 Cells ,Solubility ,Protein Structure and Folding ,Intracellular - Abstract
The transactivation response element (TAR) DNA-binding protein-43 (TDP-43) is a nuclear protein that normally regulates transcription and splicing. Abnormal accumulation of insoluble inclusions containing TDP-43 has been recently reported in the affected tissues of amyotrophic lateral sclerosis (ALS) patients. Here, we show that intracellular aggregation of TDP-43 can be triggered by transduction of fibrillar aggregates prepared from in vitro functional TDP-43. Sarkosyl is found to be incapable of solubilizing those intracellularly seeded aggregates of TDP-43, which is consistent with the observation that TDP-43 inclusions in ALS patients are sarkosyl-insoluble. In addition, intracellular seeding in our cell models reproduces ubiquitination of TDP-43 aggregates, which is another prominent feature of TDP-43 inclusions in ALS patients. Although it has been so far difficult to initiate disease-associated changes of TDP-43 using cultured cell models, we propose that a seeding reaction is a key to construct a model to monitor TDP-43 pathologies.
- Published
- 2011
27. Expression of two microRNAs, ame-mir-276 and -1000, in the adult honeybee (Apis mellifera) brain
- Author
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Takeshi H. Saito, Sayaka Hori, Kumi Kaneko, Hideaki Takeuchi, and Takeo Kubo
- Subjects
brain ,[SDV.BID]Life Sciences [q-bio]/Biodiversity ,Bioinformatics ,03 medical and health sciences ,0302 clinical medicine ,Gene expression ,microRNA ,honey bee ,Drosophila ,Gene ,030304 developmental biology ,Genetics ,[SDV.EE]Life Sciences [q-bio]/Ecology, environment ,0303 health sciences ,biology ,Honey bee ,biology.organism_classification ,[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology ,Insect Science ,[SDV.SA.SPA]Life Sciences [q-bio]/Agricultural sciences/Animal production studies ,Mushroom bodies ,Neural function ,gene expression ,Apis mellifera ,Optic lobes ,030217 neurology & neurosurgery - Abstract
International audience; To identify candidate microRNAs involved in post-transcriptional regulation of brain (region)-selective gene expression in the adult honeybee brain, we isolated eight microRNAs: seven known microRNAs, ame-mir-2-1, −8, 13a, −34, −276, −317, −1000, and one novel one, named mir-hbd, that has significant sequence similarity with the Drosophila dme-mir-11. Among them, ame-mir-1000 and −276 were expressed in a brain-selective and -preferential manner, respectively, in workers and drones. In particular, ame-mir-276-expression was enriched in the optic lobes and in the small type-Kenyon cells of the mushroom bodies in the nurse bee, forager, queen, and drone brains. Almost all predicted targets of amemir-1000 and −276 encode neural function related genes, suggesting the involvement in neural function of both microRNAs.
- Published
- 2011
28. Crystal Structure of an Active Form of BACE1, an Enzyme Responsible for Amyloid β Protein Production▿
- Author
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Nobuyuki Nukina, Tamao Hisano, Takashi Sakurai, Kumi Kaneko, Hideaki Shimizu, and Asako Tosaki
- Subjects
Protein Conformation ,Crystallography, X-Ray ,Catalysis ,Enzyme activator ,Protein structure ,Catalytic Domain ,Hydrolase ,Aspartic acid ,mental disorders ,Aspartic Acid Endopeptidases ,Humans ,Binding site ,Enzyme Inhibitors ,Molecular Biology ,chemistry.chemical_classification ,Aspartic Acid ,Amyloid beta-Peptides ,Binding Sites ,biology ,Cell Biology ,Articles ,Hydrogen-Ion Concentration ,Transmembrane protein ,Recombinant Proteins ,Enzyme Activation ,Enzyme ,Biochemistry ,chemistry ,Biophysics ,biology.protein ,Amyloid Precursor Protein Secretases ,Amyloid precursor protein secretase ,Oligopeptides - Abstract
BACE1 (beta-secretase) is a transmembrane aspartic protease that cleaves the beta-amyloid precursor protein and generates the amyloid beta peptide (Abeta). BACE1 cycles between the cell surface and the endosomal system many times and becomes activated interconvertibly during its cellular trafficking, leading to the production of Abeta. Here we report the crystal structure of the catalytically active form of BACE1. The active form has novel structural features involving the conformation of the flap and subsites that promote substrate binding. The functionally essential residues and water molecules are well defined and play a key role in the iterative activation of BACE1. We further describe the crystal structure of the dehydrated form of BACE1, showing that BACE1 activity is dependent on the dynamics of a catalytically required Asp-bound water molecule, which directly affects its catalytic properties. These findings provide insight into a novel regulation of BACE1 activity and elucidate how BACE1 modulates its activity during cellular trafficking.
- Published
- 2008
29. Proneurotensin/neuromedin N secreted from small cell lung carcinoma cell lines as a potential tumor marker
- Author
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Ken Yamaguchi, Keiichi Ohshima, Kumi Kaneko, Tohru Mochizuki, Shoji Miyajima, and Shun-ichiro Ogura
- Subjects
Pathology ,medicine.medical_specialty ,Lung ,Clinical Biochemistry ,Cell ,Biology ,Proteomics ,chemistry.chemical_compound ,medicine.anatomical_structure ,Secretory protein ,chemistry ,Cancer cell ,medicine ,Cancer research ,Neuromedin N ,Small Cell Lung Carcinoma ,Tumor marker - Abstract
Proteins secreted from specific cancer cells have a high potential for use as tumor markers. We identified secreted proteins produced by 15 different carcinoma cell lines grown in serum-free medium using MS/MS. Proneurotensin/neuromedin N (proNT/NMN) was found in conditioned medium from four of seven small cell lung carcinoma cell lines but not from eight nonsmall cell lung carcinoma cell lines. These results indicate proNT/NMN has potential as a specific tumor marker of small cell lung carcinoma.
- Published
- 2008
30. Effects of several virucidal agents on inactivation of influenza, Newcastle disease, and avian infectious bronchitis viruses in the allantoic fluid of chicken eggs
- Author
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Motoharu, Abe, Kumi, Kaneko, Ai, Ueda, Hiroshi, Otsuka, Kouichi, Shiosaki, Chikateru, Nozaki, and Shuro, Goto
- Subjects
Ethanol ,Sodium Hypochlorite ,Infectious bronchitis virus ,Newcastle disease virus ,Chick Embryo ,Orthomyxoviridae ,Influenza B virus ,Influenza A Virus, H1N1 Subtype ,Anti-Infective Agents ,Allantois ,Animals ,Sodium Hydroxide ,Virus Inactivation ,Benzalkonium Compounds - Abstract
General theories on the inactivation of viruses in the presence of a concentrated protein, such as the allantoic fluid of chicken eggs, are not useful. That is, although sodium hypochlorite and sodium hydroxide are generally known as strong virucidal agents, they do not sufficiently inactivate viruses in allantoic fluid. We found that benzalkonium chloride (BC) is an effective virucidal agent against influenza, Newcastle disease, and avian infectious bronchitis viruses even in the presence of a concentrated protein. BC is easily biodegradable by activated sludge and is not very harmful to humans. We strongly recommend BC as a useful virucidal agent, especially in the manufacture of vaccines for these viruses.
- Published
- 2007
31. Sodium channel beta4 subunit: down-regulation and possible involvement in neuritic degeneration in Huntington's disease transgenic mice
- Author
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Akira Tamaoka, Tetsurou Ikeda, Fumitaka Oyama, Nobuyuki Nukina, Naoaki Sakamoto, Taishi Suzuki, Takashi Sakurai, Haruko Miyazaki, Chiharu Uchikawa, Kumi Kaneko, Masaru Kurosawa, Celine Becquet, and Yoko Machida
- Subjects
Genetically modified mouse ,Pathology ,medicine.medical_specialty ,Dendritic spine ,Neurite ,Databases, Factual ,Central nervous system ,Down-Regulation ,Fluorescent Antibody Technique ,Mice, Transgenic ,Striatum ,Biology ,Biochemistry ,Sodium Channels ,Cellular and Molecular Neuroscience ,Mice ,Huntington's disease ,medicine ,Neurites ,Animals ,Humans ,In Situ Hybridization ,Brain Chemistry ,Voltage-Gated Sodium Channel beta-4 Subunit ,Reverse Transcriptase Polymerase Chain Reaction ,Sodium channel ,Gene Expression Profiling ,Computational Biology ,DNA ,medicine.disease ,Blotting, Northern ,Immunohistochemistry ,Cell biology ,Neostriatum ,medicine.anatomical_structure ,Huntington Disease ,Nerve Degeneration ,Neuron - Abstract
Sodium channel beta4 is a very recently identified auxiliary subunit of the voltage-gated sodium channels. To find the primarily affected gene in Huntington's disease (HD) pathogenesis, we profiled HD transgenic mice using a high-density oligonucleotide array and identified beta4 as an expressed sequence tag (EST) that was significantly down-regulated in the striatum of HD model mice and patients. Reduction in beta4 started at a presymptomatic stage in HD mice, whereas other voltage-gated ion channel subunits were decreased later. In contrast, spinal cord neurons, which generate only negligible levels of expanded polyglutamine aggregates, maintained normal levels of beta4 expression even at the symptomatic stage. Overexpression of beta4 induced neurite outgrowth in Neuro2a cells, and caused a thickening of dendrites and increased density of dendritic spines in hippocampal primary neurons, indicating that beta4 modulates neurite outgrowth activities. These results suggest that down-regulation of beta4 may lead to abnormalities of sodium channel and neurite degeneration in the striatum of HD transgenic mice and patients with HD.
- Published
- 2006
32. beta Subunits of voltage-gated sodium channels are novel substrates of beta-site amyloid precursor protein-cleaving enzyme (BACE1) and gamma-secretase
- Author
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Paul Saftig, Nobuyuki Nukina, Haruko Miyazaki, Fumitaka Oyama, Takashi Sakurai, Koji Wada, Bart De Strooper, Hon Kit Wong, Kumi Kaneko, and Masaru Kurosawa
- Subjects
Proteases ,Blotting, Western ,Detergents ,Genetic Vectors ,Molecular Sequence Data ,Plasma protein binding ,Transfection ,Biochemistry ,Presenilin ,Cell Line ,Amyloid beta-Protein Precursor ,Mice ,Alzheimer Disease ,mental disorders ,Endopeptidases ,medicine ,Amyloid precursor protein ,Animals ,Aspartic Acid Endopeptidases ,Humans ,Amino Acid Sequence ,Binding site ,Molecular Biology ,Cells, Cultured ,chemistry.chemical_classification ,Mice, Knockout ,Neurons ,Binding Sites ,biology ,Sequence Homology, Amino Acid ,Sodium channel ,Cell Membrane ,Brain ,Cell Biology ,Fibroblasts ,medicine.disease ,Phosphoric Monoester Hydrolases ,Protein Structure, Tertiary ,Mice, Inbred C57BL ,Enzyme ,chemistry ,Microscopy, Fluorescence ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,biology.protein ,RNA Interference ,Alzheimer's disease ,Amyloid Precursor Protein Secretases ,Protein Binding - Abstract
Sequential processing of amyloid precursor protein (APP) by membrane-bound proteases, BACE1 and gamma-secretase, plays a crucial role in the pathogenesis of Alzheimer disease. Much has been discovered on the properties of these proteases; however, regulatory mechanisms of enzyme-substrate interaction in neurons and their involvement in pathological changes are still not fully understood. It is mainly because of the membrane-associated cleavage of these proteases and the lack of information on new substrates processed in a similar way to APP. Here, using RNA interference-mediated BACE1 knockdown, mouse embryonic fibroblasts that are deficient in either BACE1 or presenilins, and BACE1-deficient mouse brain, we show clear evidence that beta subunits of voltage-gated sodium channels are sequentially processed by BACE1 and gamma-secretase. These results may provide new insights into the underlying pathology of Alzheimer disease.
- Published
- 2005
33. A GDP/GTP exchange protein for the Rab3 small G protein family up-regulates a postdocking step of synaptic exocytosis in central synapses
- Author
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Hiroyoshi Ishizaki, Yoshihiro Hirata, Kumi Kaneko, Yoshimi Takai, Jun Miyoshi, Kazuhiko Yamaguchi, Miki Tanaka, and Akira Mizoguchi
- Subjects
GTP' ,G protein ,rab3 GTP-Binding Proteins ,Small G Protein ,Biology ,Synaptic vesicle ,Hippocampus ,Exocytosis ,chemistry.chemical_compound ,Mice ,Downregulation and upregulation ,Animals ,Guanine Nucleotide Exchange Factors ,Neurotransmitter ,Mice, Knockout ,Neurons ,Multidisciplinary ,Excitatory Postsynaptic Potentials ,Munc-18 ,Biological Sciences ,Cell biology ,Up-Regulation ,chemistry ,Synapses ,Calcium - Abstract
The Rab3 GDP/GTP exchange protein (Rab3 GEP) activates the Rab3 small GTP-binding protein (G protein) family, including Rab3A that is an important member controlling synaptic vesicle trafficking. Here, we examined the role of Rab3 GEP in regulating neurotransmitter release in autapses of mouse hippocampal neurons in culture. The release probability was markedly reduced in Rab3 GEP−/− neurons, whereas the readily releasable pool size was not different between WT and Rab3 GEP−/− neurons, indicating that Rab3 GEP up-regulates a postdocking step of synaptic exocytosis. Because Rab3A reportedly down-regulates Ca 2+ -triggered fusion of synaptic vesicles, these results provide evidence for a role of Rab3 GEP in the postdocking process distinct from Rab3A activation.
- Published
- 2002
34. Dscam is associated with axonal and dendritic features of neuronal cells
- Author
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Toshimitsu Suzuki, Takumi Akagi, Kumi Kaneko, Yukie Tsutsumi, Kenji Amano, Tsutomu Hashikawa, Kazuhiro Yamakawa, Kishan Lal Agarwala, Subramaniam Ganesh, and Kazuhiko Yamaguchi
- Subjects
Nervous system ,Central Nervous System ,Cerebellum ,Aging ,animal structures ,Hippocampus ,Fluorescent Antibody Technique ,Cell Communication ,Hippocampal formation ,Biology ,Cellular and Molecular Neuroscience ,DSCAM ,Mice ,Fetus ,medicine ,Animals ,Cellular localization ,Cells, Cultured ,Body Patterning ,Mice, Inbred BALB C ,Cell adhesion molecule ,fungi ,Gene Expression Regulation, Developmental ,Proteins ,Cell Differentiation ,Dendrites ,Axons ,Olfactory bulb ,Protein Structure, Tertiary ,Mice, Inbred C57BL ,Molecular Weight ,Microscopy, Electron ,medicine.anatomical_structure ,nervous system ,Female ,Nerve Net ,Neuroscience ,Cell Adhesion Molecules - Abstract
Dscam, a novel cell-adhesion molecule belonging to the Ig-superfamily mediates homophilic intercellular adhesion and is expressed abundantly in the nervous system during development. To gain better understanding on the role of Dscam in neuronal differentiation, we raised an antibody and characterized its protein product. Anti-Dscam antibody detected an ∼200-kDa protein band in human and mouse brain lysates. Immunohistochemical studies showed that during embryonic development of mice, mouse Dscam is expressed throughout the neuronal tissues and also in nonneuronal tissues such as lung, liver, and limb buds. In adult brain Dscam expression is predominant in the cerebellum, hippocampus, and olfactory bulb. Immunofluorescence double labeling of hippocampal and cerebellar primary cultures revealed that Dscam is associated with axonal and dendritic processes. In view of its cellular localization and spatiotemporal expression pattern, we suggest that Dscam is involved in cell–cell interactions during axonal-dendritic development, and maintenance of functional neuronal networks. J. Neurosci. Res. 66:337–346, 2001. © 2001 Wiley-Liss, Inc.
- Published
- 2001
35. 2P-076 Molecular dissection of SOD1 aggregation and its structural rationale(The 46th Annual Meeting of the Biophysical Society of Japan)
- Author
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Nobuyuki Nukina, Yoshiaki Furukawa, and Kumi Kaneko
- Subjects
Engineering ,business.industry ,medicine ,Engineering ethics ,Nanotechnology ,Dissection (medical) ,business ,medicine.disease - Published
- 2008
36. 1P065 A new pathomechanism of amyotrophic lateral sclerosis regulated by aggregation of FUS/TLS protein(01C. Protein:Property,Poster)
- Author
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Yoshiaki Furukawa, Nobuyuki Nukina, Shoji Watanabe, Takao Nomura, Koji Yamanaka, and Kumi Kaneko
- Subjects
Chemistry ,medicine ,Amyotrophic lateral sclerosis ,medicine.disease ,Neuroscience - Published
- 2013
37. In Situ Hybridization Analysis of the Expression of Futsch, Tau, and MESK2 Homologues in the Brain of the European Honeybee (Apis mellifera L.)
- Author
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Mai M Morimoto, Takayoshi Nakaoka, Satomi Tsuboko, Tomoko Fujiyuki, Hideaki Takeuchi, Kumi Kaneko, Kenichi Shirai, Akiko Wakamoto, Rajib Kumar Paul, Sayaka Hori, and Takeo Kubo
- Subjects
Male ,Candidate gene ,Molecular Sequence Data ,lcsh:Medicine ,Genes, Insect ,In situ hybridization ,Biology ,Complementary DNA ,Gene expression ,Neuropil ,medicine ,Animals ,Amino Acid Sequence ,lcsh:Science ,Gene ,In Situ Hybridization ,Oligonucleotide Array Sequence Analysis ,Regulation of gene expression ,Genetics ,Neuroscience/Behavioral Neuroscience ,Multidisciplinary ,Sequence Homology, Amino Acid ,Neuroscience/Neuronal and Glial Cell Biology ,Gene Expression Profiling ,lcsh:R ,Pupa ,Brain ,Gene Expression Regulation, Developmental ,Bees ,Gene expression profiling ,medicine.anatomical_structure ,Insect Proteins ,Female ,lcsh:Q ,Research Article ,Neuroscience - Abstract
Background The importance of visual sense in Hymenopteran social behavior is suggested by the existence of a Hymenopteran insect-specific neural circuit related to visual processing and the fact that worker honeybee brain changes morphologically according to its foraging experience. To analyze molecular and neural bases that underlie the visual abilities of the honeybees, we used a cDNA microarray to search for gene(s) expressed in a neural cell-type preferential manner in a visual center of the honeybee brain, the optic lobes (OLs). Methodology/Principal Findings Expression analysis of candidate genes using in situ hybridization revealed two genes expressed in a neural cell-type preferential manner in the OLs. One is a homologue of Drosophila futsch, which encodes a microtubule-associated protein and is preferentially expressed in the monopolar cells in the lamina of the OLs. The gene for another microtubule-associated protein, tau, which functionally overlaps with futsch, was also preferentially expressed in the monopolar cells, strongly suggesting the functional importance of these two microtubule-associated proteins in monopolar cells. The other gene encoded a homologue of Misexpression Suppressor of Dominant-negative Kinase Suppressor of Ras 2 (MESK2), which might activate Ras/MAPK-signaling in Drosophila. MESK2 was expressed preferentially in a subclass of neurons located in the ventral region between the lamina and medulla neuropil in the OLs, suggesting that this subclass is a novel OL neuron type characterized by MESK2-expression. These three genes exhibited similar expression patterns in the worker, drone, and queen brains, suggesting that they function similarly irrespective of the honeybee sex or caste. Conclusions Here we identified genes that are expressed in a monopolar cell (Amfutsch and Amtau) or ventral medulla-preferential manner (AmMESK2) in insect OLs. These genes may aid in visualizing neurites of monopolar cells and ventral medulla cells, as well as in analyzing the function of these neurons.
- Published
- 2010
38. 2P048 1E1420 Structural polymorphism of protein aggregates and its pathological relevance(The 48th Annual Meeting of the Biophysical Society of Japan)
- Author
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Yoshiaki Furukawa, Koji Yamanaka, Nobuyuki Nukina, and Kumi Kaneko
- Subjects
Evolutionary biology ,Physiology ,Biology ,Protein aggregation ,Pathological - Published
- 2010
39. 1P-058 Cross-seeding fibrillation of Q/N-rich proteins offers new pathomechanism of polyglutamine diseases(Protein:Property, The 47th Annual Meeting of the Biophysical Society of Japan)
- Author
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Gen Matsumoto, Yoshiaki Furukawa, Masaru Kurosawa, Nobuyuki Nukina, and Kumi Kaneko
- Subjects
Fibrillation ,medicine ,Seeding ,Nanotechnology ,Computational biology ,medicine.symptom ,Biology - Published
- 2009
40. 1YP1-08 Cross-seeding fibrillation of Q/N-rich proteins offers new pathomechanism of polyglutamine diseases(1YP1 Early Research in Biophysics Award Candidate Presentations,The 47th Annual Meeting of the Biophysical Society of Japan)
- Author
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Yoshiaki Furukawa, Gen Matsumoto, Nobuyuki Nukina, Masaru Kurosawa, and Kumi Kaneko
- Subjects
Fibrillation ,medicine ,Physiology ,Biology ,medicine.symptom ,Neuroscience - Published
- 2009
41. BACE1 cleavage mediates neurite morphology induced by sodium channel β4 subunit
- Author
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Fumitaka Oyama, Akira Tamaoka, Haruko Miyazaki, Nobuyuki Nukina, Takashi Sakurai, Hong Kit Wong, and Kumi Kaneko
- Subjects
Biochemistry ,Neurite ,Chemistry ,General Neuroscience ,Sodium channel ,Biophysics ,ComputingMethodologies_DOCUMENTANDTEXTPROCESSING ,β4 subunit ,General Medicine ,Cleavage (embryo) - Abstract
application/pdf
- Published
- 2007
42. A new membrane microdomain-dependent regulatory mechanism of amyloid precursor protein processing
- Author
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Misako Okuno, Takashi Sakurai, Kumi Kaneko, Taku Kashiyama, Nobuyuki Nukina, and Koji Wada
- Subjects
Membrane ,biology ,Chemistry ,Mechanism (biology) ,General Neuroscience ,Lipid microdomain ,Amyloid precursor protein ,biology.protein ,P3 peptide ,General Medicine ,Amyloid precursor protein secretase ,Cell biology ,Biochemistry of Alzheimer's disease - Published
- 2007
43. 3P059 Elimination of post-translational modifications in SOD1 leads to form pathological amyloid-like aggregates in familial ALS(Proteins-stability, folding, and other physicochemical properties,Oral Presentations)
- Author
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Yoshiaki Furukawa, Koji Yamanaka, Kumi Kaneko, and Nobuyuki Nukina
- Subjects
Folding (chemistry) ,Biochemistry ,Chemistry ,SOD1 ,Posttranslational modification ,Pathological ,Amyloid like - Published
- 2007
44. 1P018 Structures of binary complex of human BACE1 (β-secretase)(1. Protein structure and dynamics (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)
- Author
-
Hideaki Shimizu, Asako Tosaki, Nobuyuki Nukina, Kumi Kaneko, and Takashi Sakurai
- Subjects
Protein structure ,Chemistry ,β secretase ,Binary complex ,Computational biology ,Session (computer science) ,Bioinformatics - Published
- 2006
45. Decrease of butylated hydroxyanisole added in the diet for a carcinogenicity test in rats and mice
- Author
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Akio Tanimura, Kumi Kaneko, Hajimu Ishiwata, and Saburo Kato
- Subjects
Hot Temperature ,Chemistry ,Health, Toxicology and Mutagenesis ,Butylated Hydroxyanisole ,General Medicine ,Anisoles ,Toxicology ,Pollution ,Animal Feed ,Diet ,Rats ,chemistry.chemical_compound ,Mice ,Carcinogens ,Ecotoxicology ,Animals ,Carcinogenicity Test ,Food science ,Butylated hydroxyanisole - Published
- 1982
46. Intranuclear Aggregation of Mutant FUS/TLS as a Molecular Pathomechanism of Amyotrophic Lateral Sclerosis.
- Author
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Takao Nomura, Shoji Watanabe, Kumi Kaneko, Koji Yamanaka, Nobuyuki Nukina, and Yoshiaki Furukawa
- Subjects
- *
AMYOTROPHIC lateral sclerosis , *MUTANT proteins , *GENETIC mutation , *CELL culture , *CYTOTOXINS - Abstract
Dominant mutations in FUS/TLS cause a familial form of amyotrophic lateral sclerosis (fALS), where abnormal accumulation of mutant FUS proteins in cytoplasm has been observed as a major pathological change. Many of pathogenic mutations have been shown to deteriorate the nuclear localization signal in FUS and thereby facilitate cytoplasmic mislocalization of mutant proteins. Several other mutations, however, exhibit no effects on the nuclear localization of FUS in cultured cells, and their roles in the pathomechanism of fALS remain obscure. Here, we show that a pathogenic mutation, G156E, significantly increases the propensities for aggregation of FUS in vitro and in vivo. Spontaneous in vitro formation of amyloid-like fibrillar aggregates was observed in mutant but not wild-type FUS, and notably, those fibrils functioned as efficient seeds to trigger the aggregation of wild-type protein. In addition, the G156E mutation did not disturb the nuclear localization of FUS but facilitated the formation of intranuclear inclusions in rat hippocampal neurons with significant cytotoxicity. We thus propose that intranuclear aggregation of FUS triggered by a subset of pathogenic mutations is an alternative pathomechanism of FUS-related fALS diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
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