175 results on '"Kudla J"'
Search Results
2. Loss of the mitochondrial cox2 intron 1 in a family of monocotyledonous plants and utilization of mitochondrial intron sequences for the construction of a nuclear intron
- Author
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Kudla, J., Albertazzi, F., Blazević, D., Hermann, M., and Bock, R.
- Published
- 2002
- Full Text
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3. The cox2 locus of the primitive angiosperm plant Acorus calamus: molecular structure, transcript processing and RNA editing
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Albertazzi, F. J., Kudla, J., and Bock, R.
- Published
- 1998
- Full Text
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4. Determinants of inheritance and gifts taxation in the European Union
- Author
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Kudła Janusz, Woźniak Rafał, Walczyk Konrad, Dudek Maciej, and Kruszewski Robert
- Subjects
inheritance tax ,gift tax ,bequest ,wealth ,dynamic panel regression ,d31 ,h24 ,Business ,HF5001-6182 - Abstract
Inheritance and gift taxation vary widely among countries in both the design and tax burden. We analyze the impact of a series of factors, such as the country’s affluence, political preferences, preferences for equity, aging ratio, fiscal standing of the state, and the country’s size, on inheritance tax systems. The applied methods involve the random effects ordered logistic regression for tax design and tobit correlated-random effect models for tax revenues. We find that inheritance tax design is mainly determined by demographic factors while tax revenues depend on a broader group of factors including political orientation of a state, condition of an economy, and the size of a country. Higher preferences for equal distribution and commitment to democratic norms are associated with higher tax revenues. Good economic condition of the state boosts revenues, as does country’s higher population. The results shed some light on future evolution of inheritance taxation.
- Published
- 2023
- Full Text
- View/download PDF
5. The BIG protein distinguishes the process of CO2 -induced stomatal closure from the inhibition of stomatal opening by CO2
- Author
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He, J., Zhang, R.-X., Peng, K., Tagliavia, C., Li, S., Xue, S., Liu, A., Hu, H., Zhang, J., Hubbard, K.E., Held, K., McAinsh, M.R., Gray, J.E., Kudla, J., Schroeder, J.I., Liang, Y.-K., and Hetherington, A.M.
- Abstract
We conducted an infrared thermal imaging-based genetic screen to identify Arabidopsis mutants displaying aberrant stomatal behavior in response to elevated concentrations of CO2 . This approach resulted in the isolation of a novel allele of the Arabidopsis BIG locus (At3g02260) that we have called CO2 insensitive 1 (cis1). BIG mutants are compromised in elevated CO2 -induced stomatal closure and bicarbonate activation of S-type anion channel currents. In contrast with the wild-type, they fail to exhibit reductions in stomatal density and index when grown in elevated CO2 . However, like the wild-type, BIG mutants display inhibition of stomatal opening when exposed to elevated CO2 . BIG mutants also display wild-type stomatal aperture responses to the closure-inducing stimulus abscisic acid (ABA). Our results indicate that BIG is a signaling component involved in the elevated CO2 -mediated control of stomatal development. In the control of stomatal aperture by CO2 , BIG is only required in elevated CO2 -induced closure and not in the inhibition of stomatal opening by this environmental signal. These data show that, at the molecular level, the CO2 -mediated inhibition of opening and promotion of stomatal closure signaling pathways are separable and BIG represents a distinguishing element in these two CO2 -mediated responses.
- Published
- 2018
6. ABA inhibits myristoylation and induces shuttling of the RGLG1 E3 ligase to promote nuclear degradation of PP2CA
- Author
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Belda-Palazon, B., Julian, J., Coego González, Alberto, Wu, Q., Zhang, X., Batistic, O., Alquraishi, S.A., Kudla, J., An, C., Rodríguez, Pedro L., Belda-Palazon, B., Julian, J., Coego González, Alberto, Wu, Q., Zhang, X., Batistic, O., Alquraishi, S.A., Kudla, J., An, C., and Rodríguez, Pedro L.
- Abstract
Hormone- and stress-induced shuttling of signaling or regulatory proteins is an important cellular mechanism to modulate hormone signaling and cope with abiotic stress. Hormone-induced ubiquitination plays a crucial role to determine the half-life of key negative regulators of hormone signaling. For ABA signaling, the degradation of clade-A PP2Cs, such as PP2CA or ABI1, is a complementary mechanism to PYR/PYL/RCAR-mediated inhibition of PP2C activity. ABA promotes the degradation of PP2CA through the RGLG1 E3 ligase, although it is not known how ABA enhances the interaction of RGLG1 with PP2CA given that they are predominantly found in the plasma membrane and the nucleus, respectively. We demonstrate that ABA modifies the subcellular localization of RGLG1 and promotes nuclear interaction with PP2CA. We found RGLG1 is myristoylated in vivo, which facilitates its attachment to the plasma membrane. ABA inhibits the myristoylation of RGLG1 through the downregulation of N-myristoyltransferase 1 (NMT1) and promotes nuclear translocation of RGLG1 in a cycloheximide-insensitive manner. Enhanced nuclear recruitment of the E3 ligase was also promoted by increasing PP2CA protein levels and the formation of RGLG1–receptor–phosphatase complexes. We show that RGLG1 mutated at the N-terminal myristoylation site shows constitutive nuclear localization and causes an enhanced response to ABA and salt or osmotic stress. RGLG1/5 can interact with certain monomeric ABA receptors, which facilitates the formation of nuclear complexes such as RGLG1–PP2CA–PYL8. In summary, we provide evidence that an E3 ligase can dynamically relocalize in response to both ABA and increased levels of its target, which reveals a mechanism to explain how ABA enhances RGLG1–PP2CA interaction and hence PP2CA degradation.
- Published
- 2019
7. The battle of two ions: Ca 2+ signalling against Na + stress
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Köster, P., primary, Wallrad, L., additional, Edel, K. H., additional, Faisal, M., additional, Alatar, A. A., additional, and Kudla, J., additional
- Published
- 2018
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8. The battle of two ions: Ca2+ signalling against Na+ stress.
- Author
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Köster, P., Wallrad, L., Edel, K. H., Faisal, M., Alatar, A. A., Kudla, J., and Weber, A.
- Subjects
SOIL salinity ,PLANT growth ,ECOLOGICAL disturbances ,ECOSYSTEMS ,NADPH oxidase - Abstract
Soil salinity adversely affects plant growth, crop yield and the composition of ecosystems. Salinity stress impacts plants by combined effects of Na+ toxicity and osmotic perturbation. Plants have evolved elaborate mechanisms to counteract the detrimental consequences of salinity. Here we reflect on recent advances in our understanding of plant salt tolerance mechanisms. We discuss the embedding of the salt tolerance‐mediating SOS pathway in plant hormonal and developmental adaptation. Moreover, we review newly accumulating evidence indicating a crucial role of a transpiration‐dependent salinity tolerance pathway, that is centred around the function of the NADPH oxidase RBOHF and its role in endodermal and Casparian strip differentiation. Together, these data suggest a unifying and coordinating role for Ca2+ signalling in combating salinity stress at the cellular and organismal level. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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9. Roles of calcium sensor proteins CBL9 and CBL1 in guard cell signalling
- Author
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McLachlan, D., primary, Kudla, J., additional, Schroeder, J., additional, and Hetherington, A., additional
- Published
- 2008
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10. Integration and channeling of calcium signaling through the CBL calcium sensor/CIPK protein kinase network
- Author
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Batistic, Oliver, primary and Kudla, J�rg, additional
- Published
- 2004
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11. Differential Expression and Nuclear Localization of Response Regulator-Like Proteins from Arabidopsis thaliana
- Author
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Lohrmann, J., primary, Buchholz, G., additional, Keitel, Claudia, additional, Sweere, Uta, additional, Kircher, S., additional, Bäurle, Isabel, additional, Kudla, J., additional, Schäfer, E., additional, and Harter, K., additional
- Published
- 1999
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12. Polyadenylation accelerates degradation of chloroplast mRNA.
- Author
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Kudla, J., primary, Hayes, R., additional, and Gruissem, W., additional
- Published
- 1996
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13. Molecular characterization of a FKBP-type immunophilin from higher plants.
- Author
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Luan, S, primary, Kudla, J, additional, Gruissem, W, additional, and Schreiber, S L, additional
- Published
- 1996
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14. Chloroplast mRNA 3′-end processing by a high molecular weight protein complex is regulated by nuclear encoded RNA binding proteins.
- Author
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Hayes, R., primary, Kudla, J., additional, Schuster, G., additional, Gabay, L., additional, Maliga, P., additional, and Gruissem, W., additional
- Published
- 1996
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15. RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL mRNA by a C to U substitution within the initiation codon.
- Author
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Kudla, J., primary, Igloi, G.L., additional, Metzlaff, M., additional, Hagemann, R., additional, and Kössel, H., additional
- Published
- 1992
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16. Molecular characterization of At5PTase1, an inositol phosphatase capable of terminating inositol trisphosphate signaling.
- Author
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Berdy, S E, Kudla, J, Gruissem, W, and Gillaspy, G E
- Abstract
The inositol triphosphate (IP(3))-signaling pathway has been associated with several developmental and physiological processes in plants, but we currently know little about the regulation of this pathway. Inositol 5' phosphatases (5PTases) are enzymes that remove a 5' phosphate from several potential second messengers, including IP(3). In catalyzing the removal of a 5' phosphate from second messenger substrates, 5PTases can act to terminate signal transduction events. We describe the molecular analysis of At5PTase1, a 5PTase gene from Arabidopsis. When expressed transiently in Arabidopsis leaf tissue or ectopically in transgenic plants, At5PTase1 allowed for the increased hydrolysis of I(1,4,5)P(3) and I(1,3,4,5)P(4) substrates. At5PTase1 did not hydrolyze I(1)P, I(1,4)P(2), or PI(4,5)P(2) substrates. This substrate specificity was similar to that of the human Type I 5PTase. We identified 14 other potential At5PTase genes and constructed an unrooted phylogenetic tree containing putative Arabidopsis, human, and yeast 5PTase proteins. This analysis indicated that the Arabidopsis 5PTases were grouped in two separate branches of the tree. The multiplicity of At5PTases indicates that these enzymes may have different substrate specificities and play different roles in signal termination in Arabidopsis.
- Published
- 2001
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17. RNA editing in an untranslated region of the Ginkgo chloroplast genome
- Author
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Kudla, J. and Bock, R.
- Published
- 1999
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18. Investigations on heat and salt stress tolerance in tomato 'Solanum lycopersicum'
- Author
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Aljabari, Z. (Zahra), Kudla, J. (Jörg), and Universitäts- und Landesbibliothek Münster
- Subjects
ddc:570 ,food and beverages ,tomato ,RBOH ,CBL ,CIPK ,amiRNA ,P2 ,Biology ,Tomate - Abstract
Die Tomate (Solanum lycopersicum) ist eine wesentliche Kulturpflanze. RBOHs sind NADPH-Oxidasen, die ROS produzieren. Sie werden durch Phosphorylierung und Ca+2-Bindung reguliert. In der vorliegenden Arbeit wurden 13 CBLs und 27 CIPKs, die im Tomaten-Genom kodiert sind, mithilfe einer bioinformatischen Analyse erfolgreich identifiziert. Zusätzlich wurden 8 SlRBOHs identifiziert. Genetische, molekulare und biochemische Beweise zeigten, dass SlCIPK23 durch Wechselwirkung und Phosphorylierung als sicherer Regler der SlRBOHF-Aktivität dient. Darüber hinaus funktionieren die SlCBL1/SlCIPK23-Gene zusammen als positive Regulatoren der SlRBOHF-Aktivität. Außerdem zeigte eine amiRNA-vermittelte SlRBOHF Knockdown-Mutant infolge des Salzstress einen Wachstumshemmungsphänotyp und eine reduzierte ROS-Produktion. Ein weiterer interessanter Aspekt dieser Arbeit ist die Erkenntnis, dass die P2 eine hitzebeständige Tomatensorte ist. Tomato (Solanum lycopersicum) is a major crop plant. ROS and Ca+2 play a central role in responses to many abiotic stresses. RBOHs are NADPH oxidases that produce ROS. They are regulated by phosphorylation and Ca+2 binding. In this study, 13 CBLs and 27 CIPKs that are encoded in the tomato genome were successfully identified by using a bioinformatics analysis. Additionally, 8 SlRBOHs were identified. Genetic, molecular and biochemical evidences revealed that SlCIPK23 functions as a positive regulator of the SlRBOHF activity through interaction and phosphorylation. Moreover, the SlCBL1/SlCIPK23 genes together were functioning as positive regulators of SlRBOHF activity. Furthermore, an amiRNA- mediated SlRBOHF knock down mutant in response to salt stress displayed growth inhibition phenotype and reduced ROS production. Another interesting aspect of this work was revealed that the P2 is a heat tolerant tomato cultivar.
- Published
- 2021
19. Entwicklung und Anwendung von In-vivo-Methoden zur Untersuchung der Protein-S-Acylierung am Tonoplasten in Arabidopsis thaliana
- Author
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Beckmann, L. (Linda), Kudla, J. (Jörg), and Universitäts- und Landesbibliothek Münster
- Subjects
Protein-S-Acylierung ,Lipidmodifikationen ,Tonoplast ,Protein-S-Acyltransferasen (PATs) ,Calcineurin B-ähnliche Proteine (CBLs) ,Proteine der pflanzlichen hypersensitiven Antwort (HIR) ,ddc:570 ,Biology - Abstract
In Arabidopsis thaliana wurden 24 Protein-S-Acyltransferasen (PATs) und 600 S-acylierte Proteine identifiziert. Über die physiologischen Funktionen der pflanzlichen PATs und die Identität ihrer Substrate ist jedoch nicht viel bekannt. In dieser Arbeit wurden neue Methoden entwickelt, mit denen funktionale PAT-Substrat Module in vivo ermittelt werden können. Diese Methoden wurden angewendet, um die Lipidmodifikation von Calcineurin B-ähnlichen Proteinen aus A. thaliana durch verschiedene pflanzliche PATs zu identifizieren und weiter zu charakterisieren. Darüber hinaus wurde ein Protein der pflanzlichen hypersensitiven Antwort (HIR1) durch Anwendung der neu etablierten Methoden als S-Acylierungssubstrat identifiziert. Die in dieser Arbeit erzielten Ergebnisse zeigen die Anwendbarkeit der neuen Methoden zur Untersuchung der Protein-S-Acylierung, sowie deren Mechanismen und Funktionen.
- Published
- 2016
20. Studies on CBL interacting protein kinases with a focus on phosphorylation events
- Author
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Becker, K. (Katia), Kudla, J. (Jörg), and Universitäts- und Landesbibliothek Münster
- Subjects
Proteinkinase ,Phosphorylierung ,CIPK ,abiotischer Stress ,Arabidopsis ,ddc:570 ,Biology - Abstract
CBL-interagierende Proteinkinasen (CIPKs) spielen eine Rolle in abiotischen Stressantworten in Pflanzen. Diese Arbeit beschäftigt sich mit Funktionen und Regulation von CIPKs aus der Modellpflanze Arabidopsis thaliana. Vergleichende Untersuchungen von Phosphorylierungsereignissen in Arabidopsis und in heterolog exprimierten CIPKs zeigten, dass diese Kinasefamilie in allen bekannten funktionalen Domänen und sowohl an konservierten als auch nicht-konservierten Aminosäuren phosphoryliert wird. Mittels molekularbiologischer Methoden wurden mögliche Funktionen der identifizierten Phosphorylierungsstellen in CIPK24 untersucht. Um zudem Informationen über bisher unbekannte Funktionen von CIPKs in vivo zu erlangen, wurden Mehrfach-Funktionsverlust-Mutanten verschiedener CIPKs generiert und eine Vierfach-Mutante initial charakterisiert. Des Weiteren wurde die Funktion von CIPK15 bei der Regulation des stressregulierten Transkriptionsfaktors ATHB6 mittels Phosphorylierung untersucht.
- Published
- 2016
21. Functional characterization of the Ca2+-regulated protein kinase AtCIPK8 involved in ABA and oxidative stress responses
- Author
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Knutova, I. (Iuliia), Kudla, J. (Jörg), and Universitäts- und Landesbibliothek Münster
- Subjects
ddc:570 ,Biology ,Calcium ,CBL ,CIPK ,reaktiver Sauerstoff ,ABA - Abstract
Zahlreiche Reize verursachen eine Konzentrationsaenderung des intrazellulaeren Calciums, die durch eine Phosphorylierungskaskade weitervermittelt werden. Calcineurin B-aehnliche (CBL) Proteine bilden in Pflanzen eine neue Gruppe von Calcium-Sensoren, die spezifische Calciumsignale verarbeiten und mit CBL-interagierenden Proteinkinasen (CIPKs) interagieren koennen. In Arabidopsis bilden 10 CBL-Calcium-Sensoren und 25 CIPKs ein Interaktionsnetzwerk zur Weiterleitung der verschiedenen, Calcium-vermittelten, Signale. In dieser Dissertation erfolgte eine funktionelle Charakterisierung von CIPK8 aus Arabidopsis auf der Ebene der Expression und Lokalisation. Zudem konnte gezeigt werden, dass CIPK8 mit verschiedenen CBL Proteinen interagieren kann und ein Interaktionsnetzwerk bildet. Weitere Analysen an Arabidopsis Pflanzen, die kein funktionelles CIPK8 mehr besitzen zeigten, dass diese Pflanzen eine veraenderte Signalantwort auf das Phytohormon ABA aufweisen und das generell CIPK8 eine wichtige Rolle bei der Bildung von reaktivem Sauerstoff und somit bei der Signalweiterleitung besitzt.
- Published
- 2009
22. Alternating inverse modulation of xylem K + /NO 3 - loading by HY5 and PIF facilitates diurnal regulation of root-to-shoot water and nutrient transport.
- Author
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Jing S, Zhang H, Yang Z, Du XQ, Hu Y, Wang SS, Wang S, Zhang K, Li Z, Wu WH, Kudla J, Li J, and Wang Y
- Abstract
Diurnal light-dark cycles regulate nutrient uptake and transport; however, the underlying molecular mechanisms remain largely unknown. Transcription factor MYB59 and ion transporter NPF7.3 participate in root-to-shoot K
+ /NO3 - translocation in Arabidopsis. In this study, transcriptional analyses and western blotting experiments revealed the diurnal expression of the MYB59-NPF7.3 module. ChIP-qPCR and EMSA showed that transcription factors HY5 and PIF directly bind to the MYB59 promoter. Phenotype analyses and ion content measurement indicated that HY5 and PIF antagonistically control root-to-shoot K+ /NO3 - translocation through the MYB59-NPF7.3 module. We found HY5 proteins accumulate in roots and repress MYB59 transcription during daytime, while PIF proteins promote MYB59 transcription in the dark. The expression levels of the NPF7.3 transcript and protein are gradually decreased during daytime, but increased at night. The enhancement of K+ /NO3 - loading into the xylem mediated by NPF7.3 could increase root pressure at night, which maintained the root-to-shoot water/nutrient translocation. This study reveals a synergistic mechanism between light signaling and nutrient transport in plants, and defines a diurnal molecular switch of driving forces for root-to-shoot water/nutrient translocation., (© 2025 The Author(s). New Phytologist © 2025 New Phytologist Foundation.)- Published
- 2025
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23. A bi-kinase module sensitizes and potentiates plant immune signaling.
- Author
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Köster P, He G, Liu C, Dong Q, Hake K, Schmitz-Thom I, Heinkow P, Eirich J, Wallrad L, Hashimoto K, Schültke S, Finkemeier I, Romeis T, and Kudla J
- Subjects
- Phosphorylation, Protein Kinases metabolism, Hydrogen Peroxide metabolism, Protein Serine-Threonine Kinases metabolism, Plant Immunity, Signal Transduction, Arabidopsis immunology, Arabidopsis metabolism, NADPH Oxidases metabolism, Arabidopsis Proteins metabolism, Arabidopsis Proteins genetics, Calcium metabolism
- Abstract
Systemic signaling is an essential hallmark of multicellular life. Pathogen encounter occurs locally but triggers organ-scale and organismic immune responses. In plants, elicitor perception provokes systemically expanding Ca
2+ and H2 O2 signals conferring immunity. Here, we identify a Ca2+ sensing bi-kinase module as becoming super-activated through mutual phosphorylation and as imposing synergistically enhanced NADPH oxidase activation. A combined two-layer bi-kinase/substrate phospho-code allows for sensitized signaling initiation already by near-resting elevations of Ca2+ concentration. Subsequently, it facilitates further signal wave proliferation with minimal Ca2+ amplitude requirement, triggering protective defense responses throughout the plant. Our study reveals how plants build and perpetuate trans-cellular immune signal proliferation while avoiding disturbance of ongoing cellular signaling along the path of response dissemination.- Published
- 2025
- Full Text
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24. A phosphorylation-regulated NPF transporter determines salt tolerance by mediating chloride uptake in soybean plants.
- Author
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Wu Y, Yuan J, Shen L, Li Q, Li Z, Cao H, Zhu L, Liu D, Sun Y, Jia Q, Chen H, Wang W, Kudla J, Zhang W, Gai J, and Zhang Q
- Abstract
Chloride (Cl
- ) ions cause major damage to crops in saline soils. Understanding the key factors that influence Cl- uptake and translocation will aid the breeding of more salt-tolerant crops. Here, using genome-wide association study and transcriptomic analysis, we identified a NITRATE TRANSPORTER 1 (NRT1)/PEPTIDE TRANSPORTER family (NPF) protein, GmNPF7.5, as the dominant gene locus influencing Cl- homeostasis in soybean (Glycine max). A natural SNP variation resulted in two haplotypes (GmNPF7.5HapA and GmNPF7.5HapB ), which was associated with Cl- content. GmNPF7.5HapA mediated Cl- or nitrate (NO3 - ) uptake in a pH-dependent manner and exhibited higher permeability for Cl- over NO3 - . The suppression of GmNPF7.5HapA expression decreased Cl- accumulation and salt damage in plants, whereas its overexpression showed the opposite effects. The elite haplotype GmNPF7.5HapB diminished Cl- transport activity independently from NO3 - permeability, thus enhancing soybean salt tolerance. Furthermore, the protein kinase GmPI4Kγ4 could phosphorylate GmNPF7.5, which repressed Cl- uptake without affecting NO3 - permeability. Our findings define a regulatory mechanism for Cl- control under NaCl stress, providing a strategy for the improvement of salt tolerance in soybean plants., Competing Interests: Disclosure and competing interests statement. The authors declare no competing interests., (© 2025. The Author(s).)- Published
- 2025
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25. Date palm diverts organic solutes for root osmotic adjustment and protects leaves from oxidative damage in early drought acclimation.
- Author
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Franzisky BL, Mueller HM, Du B, Lux T, White PJ, Carpentier SC, Winkler JB, Schnitzler JP, Kudla J, Kangasjärvi J, Reichelt M, Mithöfer A, Mayer KFX, Rennenberg H, Ache P, Hedrich R, Messerer M, and Geilfus CM
- Abstract
Date palm (Phoenix dactylifera L.) is an important crop in arid regions that is well-adapted to desert ecosystems. To understand the remarkable ability to grow and yield in water-limited environments, experiments with water-withholding for up to four weeks were conducted. In response to drought, root, rather than leaf, osmotic strength increased, with organic solutes such as sugars and amino acids contributing more to the osmolyte increase than minerals. Consistently, carbon and amino acid metabolism was acclimated toward biosynthesis at both the transcriptional and translational levels. In leaves, a remodeling of membrane systems was observed, suggesting changes in thylakoid lipid composition, which together with the restructuring of the photosynthetic apparatus, indicated an acclimation preventing oxidative damage. Thus, xerophilic date palm avoids oxidative damage under drought by combined prevention and rapid detoxification of oxygen radicals. Although minerals were expected to serve as cheap key osmotics, date palm also relies on organic osmolytes for osmotic adjustment of the roots during early drought acclimation. The diversion of these resources away from growth is consistent with date palm's strategy of generally slow growth in harsh environments and clearly indicates a trade-off between growth and stress-related physiological responses., (© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology.)
- Published
- 2024
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26. Integrative multi-omics analyses of date palm (Phoenix dactylifera) roots and leaves reveal how the halophyte land plant copes with sea water.
- Author
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Mueller HM, Franzisky BL, Messerer M, Du B, Lux T, White PJ, Carpentier SC, Winkler JB, Schnitzler JP, El-Serehy HA, Al-Rasheid KAS, Al-Harbi N, Alfarraj S, Kudla J, Kangasjärvi J, Reichelt M, Mithöfer A, Mayer KFX, Rennenberg H, Ache P, Hedrich R, and Geilfus CM
- Subjects
- Salt-Tolerant Plants genetics, Multiomics, Proteomics, Seawater, Phoeniceae genetics
- Abstract
Date palm (Phoenix dactylifera L.) is able to grow and complete its life cycle while being rooted in highly saline soils. Which of the many well-known salt-tolerance strategies are combined to fine-tune this remarkable resilience is unknown. The precise location, whether in the shoot or the root, where these strategies are employed remains uncertain, leaving us unaware of how the various known salt-tolerance mechanisms are integrated to fine-tune this remarkable resilience. To address this shortcoming, we exposed date palm to a salt stress dose equivalent to seawater for up to 4 weeks and applied integrative multi-omics analyses followed by targeted metabolomics, hormone, and ion analyses. Integration of proteomic into transcriptomic data allowed a view beyond simple correlation, revealing a remarkably high degree of convergence between gene expression and protein abundance. This sheds a clear light on the acclimatization mechanisms employed, which depend on reprogramming of protein biosynthesis. For growth in highly saline habitats, date palm effectively combines various salt-tolerance mechanisms found in both halophytes and glycophytes: "avoidance" by efficient sodium and chloride exclusion at the roots, and "acclimation" by osmotic adjustment, reactive oxygen species scavenging in leaves, and remodeling of the ribosome-associated proteome in salt-exposed root cells. Combined efficiently as in P. dactylifera L., these sets of mechanisms seem to explain the palm's excellent salt stress tolerance., (© 2023 The Authors. The Plant Genome published by Wiley Periodicals LLC on behalf of Crop Science Society of America.)
- Published
- 2024
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27. Analysis of the elemental species-dependent uptake of lanthanide complexes in Arabidopsis thaliana plants by LA-ICP-MS.
- Author
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Sommer K, Becker T, von Bremen-Kühne M, Gotters M, Quarles CD, Sperling M, Kudla J, and Karst U
- Subjects
- Gadolinium, Gadolinium DTPA chemistry, Contrast Media chemistry, Arabidopsis, Organometallic Compounds chemistry, Lanthanoid Series Elements, Laser Therapy
- Abstract
Gadolinium-based contrast agents (GBCAs) are found increasingly in different water bodies, making the investigation of their uptake and distribution behavior in plants a matter of high interest to assess their potential effects on the environment. Depending on the used complexing agent, they are classified into linear or macrocyclic GBCAs, with macrocyclic complexes being more stable. In this study, by using TbCl
3 , Gd-DTPA-BMA, and Eu-DOTA as model compounds for ionic, linear, and macrocyclic lanthanide species, the elemental species-dependent uptake into leaves of Arabidopsis thaliana under identical biological conditions was studied. After growing for 14 days on medium containing the lanthanide species, the uptake of all studied compounds was confirmed by means of laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS). Furthermore, the uptake rate of TbCl3 and the linear Gd-DTPA-BMA was similar, with Tb and Gd hotspots colocated in the areas of hydathodes and the trichomes of the leaves. In contrast, in the case of the macrocyclic Eu-DOTA, Eu was mainly located in the leaf veins. Additionally, Eu was colocated with Tb and Gd in the hydathode at the tip of the leave. Removal of the lanthanide species from the medium led to a decrease in signal intensities, indicating their subsequent release to some extent. However, seven days after the removal, depositions of Eu, Gd, and Tb were still present in the same areas of the leaves as before, showing that complete elimination was not achieved after this period of time. Overall, more Eu was present in the leaves compared to Gd and Tb, which can be explained by the high stability of the Eu-DOTA complex, potentially leading to a higher transport rate into the leaves, whereas TbCl3 and Gd-DTPA-BMA could interact with the roots, reducing their mobility., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)- Published
- 2023
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28. A salt stress-activated GSO1-SOS2-SOS1 module protects the Arabidopsis root stem cell niche by enhancing sodium ion extrusion.
- Author
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Chen C, He G, Li J, Perez-Hormaeche J, Becker T, Luo M, Wallrad L, Gao J, Li J, Pardo JM, Kudla J, and Guo Y
- Subjects
- Sodium metabolism, Stem Cell Niche, Salt Stress, Protein Serine-Threonine Kinases genetics, Protein Serine-Threonine Kinases metabolism, Sodium-Hydrogen Exchangers genetics, Sodium-Hydrogen Exchangers metabolism, Arabidopsis metabolism, Arabidopsis Proteins metabolism
- Abstract
Soil salinity impairs plant growth reducing crop productivity. Toxic accumulation of sodium ions is counteracted by the Salt Overly Sensitive (SOS) pathway for Na
+ extrusion, comprising the Na+ transporter SOS1, the kinase SOS2, and SOS3 as one of several Calcineurin-B-like (CBL) Ca2 + sensors. Here, we report that the receptor-like kinase GSO1/SGN3 activates SOS2, independently of SOS3 binding, by physical interaction and phosphorylation at Thr16. Loss of GSO1 function renders plants salt sensitive and GSO1 is both sufficient and required for activating the SOS2-SOS1 module in yeast and in planta. Salt stress causes the accumulation of GSO1 in two specific and spatially defined areas of the root tip: in the endodermis section undergoing Casparian strip (CS) formation, where it reinforces the CIF-GSO1-SGN1 axis for CS barrier formation; and in the meristem, where it creates the GSO1-SOS2-SOS1 axis for Na+ detoxification. Thus, GSO1 simultaneously prevents Na+ both from diffusing into the vasculature, and from poisoning unprotected stem cells in the meristem. By protecting the meristem, receptor-like kinase-conferred activation of the SOS2-SOS1 module allows root growth to be maintained in adverse environments., (© 2023 The Authors. Published under the terms of the CC BY NC ND 4.0 license.)- Published
- 2023
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29. The CIPK23 protein kinase represses SLAC1-type anion channels in Arabidopsis guard cells and stimulates stomatal opening.
- Author
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Huang S, Maierhofer T, Hashimoto K, Xu X, Karimi SM, Müller H, Geringer MA, Wang Y, Kudla J, De Smet I, Hedrich R, Geiger D, and Roelfsema MRG
- Subjects
- Abscisic Acid metabolism, Anions metabolism, Membrane Proteins metabolism, Plant Stomata physiology, Protein Kinases metabolism, Protein Serine-Threonine Kinases metabolism, Arabidopsis genetics, Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism
- Abstract
Guard cells control the opening of stomatal pores in the leaf surface, with the use of a network of protein kinases and phosphatases. Loss of function of the CBL-interacting protein kinase 23 (CIPK23) was previously shown to decrease the stomatal conductance, but the molecular mechanisms underlying this response still need to be clarified. CIPK23 was specifically expressed in Arabidopsis guard cells, using an estrogen-inducible system. Stomatal movements were linked to changes in ion channel activity, determined with double-barreled intracellular electrodes in guard cells and with the two-electrode voltage clamp technique in Xenopus oocytes. Expression of the phosphomimetic variant CIPK23
T190D enhanced stomatal opening, while the natural CIPK23 and a kinase-inactive CIPK23K60N variant did not affect stomatal movements. Overexpression of CIPK23T190D repressed the activity of S-type anion channels, while their steady-state activity was unchanged by CIPK23 and CIPK23K60N . We suggest that CIPK23 enhances the stomatal conductance at favorable growth conditions, via the regulation of several ion transport proteins in guard cells. The inhibition of SLAC1-type anion channels is an important facet of this response., (© 2023 The Authors. New Phytologist © 2023 New Phytologist Foundation.)- Published
- 2023
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30. Cold-induced calreticulin OsCRT3 conformational changes promote OsCIPK7 binding and temperature sensing in rice.
- Author
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Guo X, Zhang D, Wang Z, Xu S, Batistič O, Steinhorst L, Li H, Weng Y, Ren D, Kudla J, Xu Y, and Chong K
- Subjects
- Temperature, Cold Temperature, Protein Kinases genetics, Protein Kinases metabolism, Gene Expression Regulation, Plant, Plant Proteins genetics, Plant Proteins metabolism, Calreticulin metabolism, Oryza genetics, Oryza metabolism
- Abstract
Unusually low temperatures caused by global climate change adversely affect rice production. Sensing cold to trigger signal network is a key base for improvement of chilling tolerance trait. Here, we report that Oryza sativa Calreticulin 3 (OsCRT3) localized at the endoplasmic reticulum (ER) exhibits conformational changes under cold stress, thereby enhancing its interaction with CBL-interacting protein kinase 7 (OsCIPK7) to sense cold. Phenotypic analyses of OsCRT3 knock-out mutants and transgenic overexpression lines demonstrate that OsCRT3 is a positive regulator in chilling tolerance. OsCRT3 localizes at the ER and mediates increases in cytosolic calcium levels under cold stress. Notably, cold stress triggers secondary structural changes of OsCRT3 and enhances its binding affinity with OsCIPK7, which finally boosts its kinase activity. Moreover, Calcineurin B-like protein 7 (OsCBL7) and OsCBL8 interact with OsCIPK7 specifically on the plasma membrane. Taken together, our results thus identify a cold-sensing mechanism that simultaneously conveys cold-induced protein conformational change, enhances kinase activity, and Ca
2+ signal generation to facilitate chilling tolerance in rice., (©2022 The Authors. Published under the terms of the CC BY NC ND 4.0 license.)- Published
- 2023
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31. Ca 2+ -dependent phosphorylation of NRAMP1 by CPK21 and CPK23 facilitates manganese uptake and homeostasis in Arabidopsis .
- Author
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Fu D, Zhang Z, Wallrad L, Wang Z, Höller S, Ju C, Schmitz-Thom I, Huang P, Wang L, Peiter E, Kudla J, and Wang C
- Subjects
- Homeostasis, Micronutrients metabolism, Phosphorylation, Plant Roots metabolism, Saccharomyces cerevisiae metabolism, Soil, Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism, Calcium metabolism, Cation Transport Proteins genetics, Cation Transport Proteins metabolism, Manganese metabolism, Protein Kinases genetics, Protein Kinases metabolism
- Abstract
Homeostasis of the essential micronutrient manganese (Mn) is crucially determined through availability and uptake efficiency in all organisms. Mn deficiency of plants especially occurs in alkaline and calcareous soils, seriously restricting crop yield. However, the mechanisms underlying the sensing and signaling of Mn availability and conferring regulation of Mn uptake await elucidation. Here, we uncover that Mn depletion triggers spatiotemporally defined long-lasting Ca
2+ oscillations in Arabidopsis roots. These Ca2+ signals initiate in individual cells, expand, and intensify intercellularly to transform into higher-order multicellular oscillations. Furthermore, through an interaction screen we identified the Ca2+ -dependent protein kinases CPK21 and CPK23 as Ca2+ signal-decoding components that bring about translation of these signals into regulation of uptake activity of the high-affinity Mn transporter natural resistance associated macrophage proteins 1 (NRAMP1). Accordingly, a cpk21 / 23 double mutant displays impaired growth and root development under Mn-limiting conditions, while kinase overexpression confers enhanced tolerance to low Mn supply to plants. In addition, we define Thr498 phosphorylation within NRAMP1 as a pivot mechanistically determining NRAMP1 activity, as revealed by biochemical assays and complementation of yeast Mn uptake and Arabidopsis nramp1 mutants. Collectively, these findings delineate the Ca2+ -CPK21/23-NRAMP1 axis as key for mounting plant Mn homeostasis.- Published
- 2022
- Full Text
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32. A Ca 2+ -sensor switch for tolerance to elevated salt stress in Arabidopsis.
- Author
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Steinhorst L, He G, Moore LK, Schültke S, Schmitz-Thom I, Cao Y, Hashimoto K, Andrés Z, Piepenburg K, Ragel P, Behera S, Almutairi BO, Batistič O, Wyganowski T, Köster P, Edel KH, Zhang C, Krebs M, Jiang C, Guo Y, Quintero FJ, Bock R, and Kudla J
- Subjects
- Calcium metabolism, Salt Stress, Sodium metabolism, Sodium-Hydrogen Exchangers genetics, Arabidopsis metabolism, Arabidopsis Proteins metabolism
- Abstract
Excessive Na
+ in soils inhibits plant growth. Here, we report that Na+ stress triggers primary calcium signals specifically in a cell group within the root differentiation zone, thus forming a "sodium-sensing niche" in Arabidopsis. The amplitude of this primary calcium signal and the speed of the resulting Ca2+ wave dose-dependently increase with rising Na+ concentrations, thus providing quantitative information about the stress intensity encountered. We also delineate a Ca2+ -sensing mechanism that measures the stress intensity in order to mount appropriate salt detoxification responses. This is mediated by a Ca2+ -sensor-switch mechanism, in which the sensors SOS3/CBL4 and CBL8 are activated by distinct Ca2+ -signal amplitudes. Although the SOS3/CBL4-SOS2/CIPK24-SOS1 axis confers basal salt tolerance, the CBL8-SOS2/CIPK24-SOS1 module becomes additionally activated only in response to severe salt stress. Thus, Ca2+ -mediated translation of Na+ stress intensity into SOS1 Na+ /H+ antiporter activity facilitates fine tuning of the sodium extrusion capacity for optimized salt-stress tolerance., Competing Interests: Declaration of interests After completion of this work in the laboratory of J.K., K.H.E. became an employee of Yara GmbH & Co. KG, a company that offers products based on calcium as a stress alleviator., (Copyright © 2022 Elsevier Inc. All rights reserved.)- Published
- 2022
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33. The potassium channel GhAKT2bD is regulated by CBL-CIPK calcium signalling complexes and facilitates K + allocation in cotton.
- Author
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Zhang R, Dong Q, Zhao P, Eickelkamp A, Ma C, He G, Li F, Wallrad L, Becker T, Li Z, Kudla J, and Tian X
- Subjects
- Calcium metabolism, HEK293 Cells, Humans, Plant Proteins genetics, Plant Proteins metabolism, Calcium Signaling, Gossypium genetics, Gossypium metabolism, Potassium metabolism, Potassium Channels genetics, Potassium Channels metabolism
- Abstract
Efficient allocation of the essential nutrient potassium (K
+ ) is a central determinant of plant ion homeostasis and involves AKT2 K+ channels. Here, we characterize four AKT2 K+ channels from cotton and report that xylem and phloem expressed GhAKT2bD facilitates K+ allocation and that AKT2-silencing impairs plant growth and development. We uncover kinase activity-dependent activation of GhAKT2bD-mediated K+ uptake by AtCBL4-GhCIPK1 calcium signalling complexes in HEK293T cells. Moreover, AtCBL4-AtCIPK6 complexes known to convey activation of AtAKT2 in Arabidopsis also activate cotton GhAKT2bD in HEK293T cells. Collectively, these findings reveal an essential role for AKT2 in the source-sink allocation of K+ in cotton and identify GhAKT2bD as subject to complex regulation by CBL-CIPK Ca2+ sensor-kinase complexes., (© 2022 The Authors. FEBS Letters published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies.)- Published
- 2022
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34. Ca 2+ -dependent successive phosphorylation of vacuolar transporter MTP8 by CBL2/3-CIPK3/9/26 and CPK5 is critical for manganese homeostasis in Arabidopsis.
- Author
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Ju C, Zhang Z, Deng J, Miao C, Wang Z, Wallrad L, Javed L, Fu D, Zhang T, Kudla J, Gong Z, and Wang C
- Subjects
- Calcium-Binding Proteins metabolism, Homeostasis, Manganese metabolism, Phosphorylation, Vacuoles metabolism, Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism, Cation Transport Proteins genetics, Cation Transport Proteins metabolism
- Abstract
Manganese (Mn) is an essential micronutrient for all living organisms. However, excess Mn supply that can occur in acid or waterlogged soils has toxic effects on plant physiology and development. Although a variety of Mn transporter families have been characterized, we have only a rudimentary understanding of how these transporters are regulated to uphold and adjust Mn homeostasis in plants. Here, we demonstrate that two calcineurin-B-like proteins, CBL2/3, and their interacting kinases, CIPK3/9/26, are key regulators of plant Mn homeostasis. Arabidopsis mutants lacking CBL2 and 3 or their interacting protein kinases CIPK3/9/26 exhibit remarkably high Mn tolerance. Intriguingly, CIPK3/9/26 interact with and phosphorylate the tonoplast-localized Mn and iron (Fe) transporter MTP8 primarily at Ser35, which is conserved among MTP8 proteins from various species. Mn transport complementation assays in yeast combined with multiple physiological assays indicate that CBL-CIPK-mediated phosphorylation of MTP8 negatively regulates its transport activity from the cytoplasm to the vacuole. Moreover, we show that sequential phosphorylation of MTP8, initially at Ser31/32 by the calcium-dependent protein kinase CPK5 and subsequently at Ser35 by CIPK26, provides an activation/deactivation fine-tuning mechanism for differential regulation of Mn transport. Collectively, our findings define a two-tiered calcium-controlled mechanism for dynamic regulation of Mn homeostasis under conditions of fluctuating Mn supply., (Copyright © 2021 The Author. Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
35. Ca 2+ signaling in plant responses to abiotic stresses.
- Author
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Dong Q, Wallrad L, Almutairi BO, and Kudla J
- Subjects
- Gene Expression Regulation, Plant, Plants, Signal Transduction, Stress, Physiological physiology, Droughts, Ecosystem
- Abstract
Adverse variations of abiotic environmental cues that deviate from an optimal range impose stresses to plants. Abiotic stresses severely impede plant physiology and development. Consequently, such stresses dramatically reduce crop yield and negatively impact on ecosystem stability and composition. Physical components of abiotic stresses can be, for example, suboptimal temperature and osmotic perturbations, while representative chemical facets of abiotic stresses can be toxic ions or suboptimal nutrient availability. The sheer complexity of abiotic stresses causes a multitude of diverse components and mechanisms for their sensing and signal transduction. Ca
2+ , as a versatile second messenger, plays multifaceted roles in almost all abiotic stress responses in that, for a certain abiotic stress, Ca2+ is not only reciprocally connected with its perception, but also multifunctionally ensures subsequent signal transduction. Here, we will focus on salt/osmotic stress and responses to altered nutrient availability as model cases to detail novel insights into the identity of components that link stress perception to Ca2+ signal formation as well as on new insights into mechanisms of Ca2+ signal implementation. Finally, we will deduce emerging conceptual consequences of these novel insights and outline arising avenues of future research on the role of Ca2+ signaling in abiotic stress responses in plants., (© 2022 Institute of Botany, Chinese Academy of Sciences.)- Published
- 2022
- Full Text
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36. Multiparameter in vivo imaging in plants using genetically encoded fluorescent indicator multiplexing.
- Author
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Waadt R, Kudla J, and Kollist H
- Subjects
- Hydrogen-Ion Concentration, Iron metabolism, Molecular Dynamics Simulation, Oxidation-Reduction, Plants genetics, Biosensing Techniques methods, Fluorescent Dyes, Luminescent Proteins, Molecular Imaging methods, Plant Physiological Phenomena, Plants metabolism
- Abstract
Biological processes are highly dynamic, and during plant growth, development, and environmental interactions, they occur and influence each other on diverse spatiotemporal scales. Understanding plant physiology on an organismic scale requires analyzing biological processes from various perspectives, down to the cellular and molecular levels. Ideally, such analyses should be conducted on intact and living plant tissues. Fluorescent protein (FP)-based in vivo biosensing using genetically encoded fluorescent indicators (GEFIs) is a state-of-the-art methodology for directly monitoring cellular ion, redox, sugar, hormone, ATP and phosphatidic acid dynamics, and protein kinase activities in plants. The steadily growing number of diverse but technically compatible genetically encoded biosensors, the development of dual-reporting indicators, and recent achievements in plate-reader-based analyses now allow for GEFI multiplexing: the simultaneous recording of multiple GEFIs in a single experiment. This in turn enables in vivo multiparameter analyses: the simultaneous recording of various biological processes in living organisms. Here, we provide an update on currently established direct FP-based biosensors in plants, discuss their functional principles, and highlight important biological findings accomplished by employing various approaches of GEFI-based multiplexing. We also discuss challenges and provide advice for FP-based biosensor analyses in plants., (© American Society of Plant Biologists 2021. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2021
- Full Text
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37. A potassium-sensing niche in Arabidopsis roots orchestrates signaling and adaptation responses to maintain nutrient homeostasis.
- Author
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Wang FL, Tan YL, Wallrad L, Du XQ, Eickelkamp A, Wang ZF, He GF, Rehms F, Li Z, Han JP, Schmitz-Thom I, Wu WH, Kudla J, and Wang Y
- Subjects
- Arabidopsis genetics, Arabidopsis growth & development, Arabidopsis Proteins genetics, COP9 Signalosome Complex genetics, COP9 Signalosome Complex metabolism, Calcium metabolism, Gene Expression Regulation, Plant, Plant Roots genetics, Plant Roots growth & development, Transcriptome, Adaptation, Physiological, Arabidopsis metabolism, Arabidopsis Proteins metabolism, Homeostasis, Nutrients metabolism, Plant Roots metabolism, Potassium metabolism
- Abstract
Organismal homeostasis of the essential ion K
+ requires sensing of its availability, efficient uptake, and defined distribution. Understanding plant K+ nutrition is essential to advance sustainable agriculture, but the mechanisms underlying K+ sensing and the orchestration of downstream responses have remained largely elusive. Here, we report where plants sense K+ deprivation and how this translates into spatially defined ROS signals to govern specific downstream responses. We define the organ-scale K+ pattern of roots and identify a postmeristematic K+ -sensing niche (KSN) where rapid K+ decline and Ca2+ signals coincide. Moreover, we outline a bifurcating low-K+ -signaling axis of CIF peptide-activated SGN3-LKS4/SGN1 receptor complexes that convey low-K+ -triggered phosphorylation of the NADPH oxidases RBOHC, RBOHD, and RBOHF. The resulting ROS signals simultaneously convey HAK5 K+ uptake-transporter induction and accelerated Casparian strip maturation. Collectively, these mechanisms synchronize developmental differentiation and transcriptome reprogramming for maintaining K+ homeostasis and optimizing nutrient foraging by roots., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2021
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38. A role for calcium-dependent protein kinases in differential CO 2 - and ABA-controlled stomatal closing and low CO 2 -induced stomatal opening in Arabidopsis.
- Author
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Schulze S, Dubeaux G, Ceciliato PHO, Munemasa S, Nuhkat M, Yarmolinsky D, Aguilar J, Diaz R, Azoulay-Shemer T, Steinhorst L, Offenborn JN, Kudla J, Kollist H, and Schroeder JI
- Subjects
- Abscisic Acid pharmacology, Carbon Dioxide, Plant Stomata, Protein Kinases genetics, Arabidopsis genetics, Arabidopsis Proteins genetics
- Abstract
Low concentrations of CO
2 cause stomatal opening, whereas [CO2 ] elevation leads to stomatal closure. Classical studies have suggested a role for Ca2+ and protein phosphorylation in CO2 -induced stomatal closing. Calcium-dependent protein kinases (CPKs) and calcineurin-B-like proteins (CBLs) can sense and translate cytosolic elevation of the second messenger Ca2+ into specific phosphorylation events. However, Ca2+ -binding proteins that function in the stomatal CO2 response remain unknown. Time-resolved stomatal conductance measurements using intact plants, and guard cell patch-clamp experiments were performed. We isolated cpk quintuple mutants and analyzed stomatal movements in response to CO2 , light and abscisic acid (ABA). Interestingly, we found that cpk3/5/6/11/23 quintuple mutant plants, but not other analyzed cpk quadruple/quintuple mutants, were defective in high CO2 -induced stomatal closure and, unexpectedly, also in low CO2 -induced stomatal opening. Furthermore, K+ -uptake-channel activities were reduced in cpk3/5/6/11/23 quintuple mutants, in correlation with the stomatal opening phenotype. However, light-mediated stomatal opening remained unaffected, and ABA responses showed slowing in some experiments. By contrast, CO2 -regulated stomatal movement kinetics were not clearly affected in plasma membrane-targeted cbl1/4/5/8/9 quintuple mutant plants. Our findings describe combinatorial cpk mutants that function in CO2 control of stomatal movements and support the results of classical studies showing a role for Ca2+ in this response., (© 2020 The Authors New Phytologist © 2020 New Phytologist Foundation.)- Published
- 2021
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39. Emerging roles of the CBL-CIPK calcium signaling network as key regulatory hub in plant nutrition.
- Author
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Dong Q, Bai B, Almutairi BO, and Kudla J
- Subjects
- Homeostasis, Membrane Transport Proteins metabolism, Plant Physiological Phenomena, Plant Proteins metabolism, Plants enzymology, Protein Kinases metabolism, Calcium Signaling genetics, Membrane Transport Proteins genetics, Nutrients metabolism, Plant Proteins genetics, Protein Kinases genetics
- Abstract
Plant physiology and development essentially depend on sufficient uptake of various essential nutritive ions via their roots and their appropriate transport and distribution within the organism. Many of these essential nutrients are heterogeneously distributed in the soil or are available in fluctuating concentrations. This natural situation requires constant regulatory adjustment and balancing of nutrient uptake and homeostasis. Here, we review recent findings on the role of Ca
2+ signals and Ca2+ -dependent regulation via the CBL-CIPK Ca2+ sensor-protein kinase network in these processes. We put special emphasis on Ca2+ controlled processes that contribute to establishing the homeostasis of macro-nutrients like potassium (K+ ), nitrogen (N), and magnesium (Mg2+ ) and on the micro-nutrient iron (Fe). Increasing experimental evidence indicates the occurrence of nutrient-specific, spatially and temporally defined cytoplasmic Ca2+ elevations as early responses to nutrient fluctuations. Specific CBL-CIPK complexes translate these signals into phosphorylation regulation of important channels and transporters like AKT1, NPF6.3/NRT1.1, AMT1, SLAC1, TPK1 and IRT1. We discuss a crucial and coordinating role for these Ca2+ signaling mechanisms in regulating the sensing, uptake, distribution and storage of various ions. Finally, we reflect on the emerging multifaceted and potentially integrating role of the "nutrient" kinase CIPK23 in regulating multiple nutrient responses. From this inventory, we finally deduce potential mechanisms that can convey the coordinated regulation of distinct steps in the transport of one individual ion and mechanisms that can bring about the integration of adaptive responses to fluctuations of different ions to establish a faithfully balanced plant nutrient homeostasis., (Copyright © 2020 Elsevier GmbH. All rights reserved.)- Published
- 2021
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40. Plasma membrane calcineurin B-like calcium-ion sensor proteins function in regulating primary root growth and nitrate uptake by affecting global phosphorylation patterns and microdomain protein distribution.
- Author
-
Chu LC, Offenborn JN, Steinhorst L, Wu XN, Xi L, Li Z, Jacquot A, Lejay L, Kudla J, and Schulze WX
- Subjects
- Arabidopsis genetics, Calcineurin metabolism, Calcium metabolism, Cell Membrane physiology, Nitrates metabolism, Phosphorylation, Plant Roots growth & development, Arabidopsis physiology, Arabidopsis Proteins genetics, Arabidopsis Proteins physiology, Calcium-Binding Proteins physiology
- Abstract
The collective function of calcineurin B-like (CBL) calcium ion (Ca
2+ ) sensors and CBL-interacting protein kinases (CIPKs) in decoding plasma-membrane-initiated Ca2+ signals to convey developmental and adaptive responses to fluctuating nitrate availability remained to be determined. Here, we generated a cbl-quintuple mutant in Arabidopsis thaliana devoid of these Ca2+ sensors at the plasma membrane and performed comparative phenotyping, nitrate flux determination, phosphoproteome analyses, and studies of membrane domain protein distribution in response to low and high nitrate availability. We observed that CBL proteins exert multifaceted regulation of primary and lateral root growth and nitrate fluxes. Accordingly, we found that loss of plasma membrane Ca2+ sensor function simultaneously affected protein phosphorylation of numerous membrane proteins, including several nitrate transporters, proton pumps, and aquaporins, as well as their distribution within plasma membrane microdomains, and identified a specific phosphorylation and domain distribution pattern during distinct phases of low and high nitrate responses. Collectively, these analyses reveal a central and coordinative function of CBL-CIPK-mediated signaling in conveying plant adaptation to fluctuating nitrate availability and identify a crucial role of Ca2+ signaling in regulating the composition and dynamics of plasma membrane microdomains., (© 2020 The Authors. New Phytologist © 2020 New Phytologist Foundation.)- Published
- 2021
- Full Text
- View/download PDF
41. Improving plant drought tolerance and growth under water limitation through combinatorial engineering of signalling networks.
- Author
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Schulz P, Piepenburg K, Lintermann R, Herde M, Schöttler MA, Schmidt LK, Ruf S, Kudla J, Romeis T, and Bock R
- Subjects
- Crops, Agricultural metabolism, Gene Expression Regulation, Plant, Plant Proteins genetics, Plants, Genetically Modified genetics, Plants, Genetically Modified metabolism, Stress, Physiological, Water metabolism, Arabidopsis genetics, Droughts
- Abstract
Agriculture is by far the biggest water consumer on our planet, accounting for 70 per cent of all freshwater withdrawals. Climate change and a growing world population increase pressure on agriculture to use water more efficiently ('more crop per drop'). Water-use efficiency (WUE) and drought tolerance of crops are complex traits that are determined by many physiological processes whose interplay is not well understood. Here, we describe a combinatorial engineering approach to optimize signalling networks involved in the control of stress tolerance. Screening a large population of combinatorially transformed plant lines, we identified a combination of calcium-dependent protein kinase genes that confers enhanced drought stress tolerance and improved growth under water-limiting conditions. Targeted introduction of this gene combination into plants increased plant survival under drought and enhanced growth under water-limited conditions. Our work provides an efficient strategy for engineering complex signalling networks to improve plant performance under adverse environmental conditions, which does not depend on prior understanding of network function., (© 2020 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.)
- Published
- 2021
- Full Text
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42. Dual-Reporting Transcriptionally Linked Genetically Encoded Fluorescent Indicators Resolve the Spatiotemporal Coordination of Cytosolic Abscisic Acid and Second Messenger Dynamics in Arabidopsis.
- Author
-
Waadt R, Köster P, Andrés Z, Waadt C, Bradamante G, Lampou K, Kudla J, and Schumacher K
- Subjects
- Adenosine Triphosphate pharmacology, Arabidopsis drug effects, Arabidopsis Proteins metabolism, Calcium metabolism, Chlorides metabolism, Cytosol drug effects, Fluorescence Resonance Energy Transfer, Glutamic Acid pharmacology, Glutathione Disulfide pharmacology, Hydrogen metabolism, Hydrogen Peroxide toxicity, Hydrogen-Ion Concentration, Indoleacetic Acids pharmacology, Oxidation-Reduction, Plant Roots drug effects, Plant Roots metabolism, Abscisic Acid metabolism, Arabidopsis genetics, Arabidopsis metabolism, Cytosol metabolism, Fluorescent Dyes metabolism, Second Messenger Systems, Transcription, Genetic drug effects
- Abstract
Deciphering signal transduction processes is crucial for understanding how plants sense and respond to environmental changes. Various chemical compounds function as central messengers within deeply intertwined signaling networks. How such compounds act in concert remains to be elucidated. We have developed dual-reporting transcriptionally linked genetically encoded fluorescent indicators (2-in-1-GEFIs) for multiparametric in vivo analyses of the phytohormone abscisic acid (ABA), Ca
2+ , protons (H+ ), chloride (anions), the glutathione redox potential, and H2 O2 Simultaneous analyses of two signaling compounds in Arabidopsis ( Arabidopsis thaliana ) roots revealed that ABA treatment and uptake did not trigger rapid cytosolic Ca2+ or H+ dynamics. Glutamate, ATP, Arabidopsis PLANT ELICITOR PEPTIDE, and glutathione disulfide (GSSG) treatments induced rapid spatiotemporally overlapping cytosolic Ca2+ , H+ , and anion dynamics, but except for GSSG, only weakly affected the cytosolic redox state. Overall, 2-in-1-GEFIs enable complementary, high-resolution in vivo analyses of signaling compound dynamics and facilitate an advanced understanding of the spatiotemporal coordination of signal transduction processes in Arabidopsis., (© 2020 American Society of Plant Biologists. All rights reserved.)- Published
- 2020
- Full Text
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43. SCHENGEN receptor module drives localized ROS production and lignification in plant roots.
- Author
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Fujita S, De Bellis D, Edel KH, Köster P, Andersen TG, Schmid-Siegert E, Dénervaud Tendon V, Pfister A, Marhavý P, Ursache R, Doblas VG, Barberon M, Daraspe J, Creff A, Ingram G, Kudla J, and Geldner N
- Subjects
- Gene Expression Regulation, Plant, NADPH Oxidases metabolism, Peroxidases metabolism, Plant Roots metabolism, Arabidopsis metabolism, Arabidopsis Proteins metabolism, Lignin metabolism, Protein Kinases metabolism, Reactive Oxygen Species metabolism
- Abstract
Production of reactive oxygen species (ROS) by NADPH oxidases (NOXs) impacts many processes in animals and plants, and many plant receptor pathways involve rapid, NOX-dependent increases of ROS. Yet, their general reactivity has made it challenging to pinpoint the precise role and immediate molecular action of ROS. A well-understood ROS action in plants is to provide the co-substrate for lignin peroxidases in the cell wall. Lignin can be deposited with exquisite spatial control, but the underlying mechanisms have remained elusive. Here, we establish a kinase signaling relay that exerts direct, spatial control over ROS production and lignification within the cell wall. We show that polar localization of a single kinase component is crucial for pathway function. Our data indicate that an intersection of more broadly localized components allows for micrometer-scale precision of lignification and that this system is triggered through initiation of ROS production as a critical peroxidase co-substrate., (© 2020 The Authors. Published under the terms of the CC BY 4.0 license.)
- Published
- 2020
- Full Text
- View/download PDF
44. Analyzing the Impact of Protein Overexpression on Ca 2+ Dynamics and Development in Tobacco Pollen Tubes.
- Author
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Zhang C, Steinhorst L, and Kudla J
- Subjects
- Fluorescence Resonance Energy Transfer standards, Plant Proteins genetics, Pollen Tube genetics, Pollen Tube physiology, Nicotiana, Calcium Signaling, Fluorescence Resonance Energy Transfer methods, Plant Proteins metabolism, Pollen Tube metabolism, Up-Regulation
- Abstract
Overexpression of RFP-tagged proteins in growing tobacco pollen tubes together with the genetically encoded Ca
2+ sensor YC3.6 allows to analyze localization and dynamics of the protein of interest, as well as the impact of its overexpression on Ca2+ dynamics and pollen tube growth. Here, we describe a step-by-step instruction for transient transformation of N. tabacum pollen and subsequent in vitro germination and Ca2+ imaging.- Published
- 2020
- Full Text
- View/download PDF
45. Rebuilding core abscisic acid signaling pathways of Arabidopsis in yeast.
- Author
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Ruschhaupt M, Mergner J, Mucha S, Papacek M, Doch I, Tischer SV, Hemmler D, Chiasson D, Edel KH, Kudla J, Schmitt-Kopplin P, Kuster B, and Grill E
- Subjects
- Arabidopsis genetics, Arabidopsis Proteins metabolism, Biosynthetic Pathways, Gene Expression Regulation, Plant, Osmotic Pressure, Phosphorylation, Protein Engineering, Protein Serine-Threonine Kinases genetics, Yeasts genetics, Abscisic Acid metabolism, Arabidopsis metabolism, Arabidopsis Proteins genetics, Yeasts growth & development
- Abstract
The phytohormone abscisic acid (ABA) regulates plant responses to abiotic stress, such as drought and high osmotic conditions. The multitude of functionally redundant components involved in ABA signaling poses a major challenge for elucidating individual contributions to the response selectivity and sensitivity of the pathway. Here, we reconstructed single ABA signaling pathways in yeast for combinatorial analysis of ABA receptors and coreceptors, downstream-acting SnRK2 protein kinases, and transcription factors. The analysis shows that some ABA receptors stimulate the pathway even in the absence of ABA and that SnRK2s are major determinants of ABA responsiveness by differing in the ligand-dependent control. Five SnRK2s, including SnRK2.4 known to be active under osmotic stress in plants, activated ABA-responsive transcription factors and were regulated by ABA receptor complexes in yeast. In the plant tissue, SnRK2.4 and ABA receptors competed for coreceptor interaction in an ABA-dependent manner consistent with a tight integration of SnRK2.4 into the ABA signaling pathway. The study establishes the suitability of the yeast system for the dissection of core signaling cascades and opens up future avenues of research on ligand-receptor regulation., (© 2019 The Authors. Published under the terms of the CC BY 4.0 license.)
- Published
- 2019
- Full Text
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46. Tissue-specific accumulation of pH-sensing phosphatidic acid determines plant stress tolerance.
- Author
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Li W, Song T, Wallrad L, Kudla J, Wang X, and Zhang W
- Subjects
- Biosensing Techniques methods, Optogenetics methods, Arabidopsis physiology, Cell Membrane metabolism, Phosphatidic Acids metabolism, Signal Transduction physiology
- Abstract
The signalling lipid phosphatidic acid (PA) is involved in regulating various fundamental biological processes in plants. However, the mechanisms of PA action remain poorly understood because currently available methods for monitoring PA fail to determine the precise spatio-temporal dynamics of this messenger in living cells and tissues of plants. Here, we have developed PAleon, a PA-specific optogenetic biosensor that reports the concentration and dynamics of bioactive PA at the plasma membrane based on Förster resonance energy transfer (FRET). PAleon was sensitive enough to monitor physiological concentrations of PA in living cells and to visualize PA dynamics at subcellular resolution in tissues when they were challenged with abscisic acid (ABA) and salt stress. PAleon bioimaging revealed kinetics and tissue specificity of salt stress-triggered PA accumulation. Compared with wild-type Arabidopsis, the pldα1 mutant lacking phospholipase Dα1 (PLDα1) for PA generation showed delayed and reduced PA accumulation. Comparative analysis of wild type and pldα1 mutant indicated that cellular pH-modulated PA interaction with target proteins and PLD/PA-mediated salt tolerance. Application of the PA biosensor PAleon uncovered specific spatio-temporal PA dynamics in plant tissues. Our findings suggest that PA signalling integrates with cellular pH dynamics to mediate plant response to salt stress.
- Published
- 2019
- Full Text
- View/download PDF
47. How plants perceive salt.
- Author
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Steinhorst L and Kudla J
- Subjects
- Plants, Sodium Chloride, Sphingolipids, Calcium, Plant Cells
- Published
- 2019
- Full Text
- View/download PDF
48. A novel Ca2+-binding protein that can rapidly transduce auxin responses during root growth.
- Author
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Hazak O, Mamon E, Lavy M, Sternberg H, Behera S, Schmitz-Thom I, Bloch D, Dementiev O, Gutman I, Danziger T, Schwarz N, Abuzeineh A, Mockaitis K, Estelle M, Hirsch JA, Kudla J, and Yalovsky S
- Subjects
- Arabidopsis genetics, Arabidopsis growth & development, Arabidopsis Proteins genetics, Calcium-Binding Proteins genetics, Carrier Proteins genetics, Gene Expression Profiling methods, Gene Expression Regulation, Developmental drug effects, Gene Expression Regulation, Developmental genetics, Gene Expression Regulation, Plant drug effects, Gene Expression Regulation, Plant genetics, Indoleacetic Acids pharmacology, Plant Roots genetics, Plant Roots growth & development, Plants, Genetically Modified, Protein Binding, Signal Transduction drug effects, Signal Transduction genetics, Arabidopsis metabolism, Arabidopsis Proteins metabolism, Calcium metabolism, Calcium-Binding Proteins metabolism, Carrier Proteins metabolism, Indoleacetic Acids metabolism, Plant Roots metabolism
- Abstract
Signaling cross talks between auxin, a regulator of plant development, and Ca2+, a universal second messenger, have been proposed to modulate developmental plasticity in plants. However, the underlying molecular mechanisms are largely unknown. Here, we report that in Arabidopsis roots, auxin elicits specific Ca2+ signaling patterns that spatially coincide with the expression pattern of auxin-regulated genes. We have identified the single EF-hand Ca2+-binding protein Ca2+-dependent modulator of ICR1 (CMI1) as an interactor of the Rho of plants (ROP) effector interactor of constitutively active ROP (ICR1). CMI1 expression is directly up-regulated by auxin, whereas the loss of function of CMI1 associates with the repression of auxin-induced Ca2+ increases in the lateral root cap and vasculature, indicating that CMI1 represses early auxin responses. In agreement, cmi1 mutants display an increased auxin response including shorter primary roots, longer root hairs, longer hypocotyls, and altered lateral root formation. Binding to ICR1 affects subcellular localization of CMI1 and its function. The interaction between CMI1 and ICR1 is Ca2+-dependent and involves a conserved hydrophobic pocket in CMI1 and calmodulin binding-like domain in ICR1. Remarkably, CMI1 is monomeric in solution and in vitro changes its secondary structure at cellular resting Ca2+ concentrations ranging between 10-9 and 10-8 M. Hence, CMI1 is a Ca2+-dependent transducer of auxin-regulated gene expression, which can function in a cell-specific fashion at steady-state as well as at elevated cellular Ca2+ levels to regulate auxin responses., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
- Full Text
- View/download PDF
49. The Ca 2+ Sensor SCaBP3/CBL7 Modulates Plasma Membrane H + -ATPase Activity and Promotes Alkali Tolerance in Arabidopsis.
- Author
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Yang Y, Wu Y, Ma L, Yang Z, Dong Q, Li Q, Ni X, Kudla J, Song C, and Guo Y
- Subjects
- Arabidopsis genetics, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism, Plant Roots genetics, Protein Serine-Threonine Kinases genetics, Protein Serine-Threonine Kinases metabolism, Proton-Translocating ATPases genetics, Signal Transduction genetics, Signal Transduction physiology, Arabidopsis metabolism, Cell Membrane metabolism, Plant Roots metabolism, Proton-Translocating ATPases metabolism
- Abstract
Saline-alkali soil is a major environmental constraint impairing plant growth and crop productivity. In this study, we identified a Ca
2+ sensor/kinase/plasma membrane (PM) H+ -ATPase module as a central component conferring alkali tolerance in Arabidopsis ( Arabidopsis thaliana ). We report that the SCaBP3 (SOS3-LIKE CALCIUM BINDING PROTEIN3)/CBL7 (CALCINEURIN B-LIKE7) loss-of-function plants exhibit enhanced stress tolerance associated with increased PM H+ -ATPase activity and provide fundamental mechanistic insights into the regulation of PM H+ -ATPase activity. Consistent with the genetic evidence, interaction analyses, in vivo reconstitution experiments, and determination of H+ -ATPase activity indicate that interaction of the Ca2+ sensor SCaBP3 with the C-terminal Region I domain of the PM H+ -ATPase AHA2 ( Arabidopsis thaliana PLASMA MEMBRANE PROTON ATPASE2) facilitates the intramolecular interaction of the AHA2 C terminus with the Central loop region of the PM H+ -ATPase to promote autoinhibition of H+ -ATPase activity. Concurrently, direct interaction of SCaPB3 with the kinase PKS5 (PROTEIN KINASE SOS2-LIKE5) stabilizes the kinase-ATPase interaction and thereby fosters the inhibitory phosphorylation of AHA2 by PKS5. Consistently, yeast reconstitution experiments and genetic analysis indicate that SCaBP3 provides a bifurcated pathway for coordinating intramolecular and intermolecular inhibition of PM H+ -ATPase. We propose that alkaline stress-triggered Ca2+ signals induce SCaBP3 dissociation from AHA2 to enhance PM H+ -ATPase activity. This work illustrates a versatile signaling module that enables the stress-responsive adjustment of plasma membrane proton fluxes., (© 2019 American Society of Plant Biologists. All rights reserved.)- Published
- 2019
- Full Text
- View/download PDF
50. ABA inhibits myristoylation and induces shuttling of the RGLG1 E3 ligase to promote nuclear degradation of PP2CA.
- Author
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Belda-Palazon B, Julian J, Coego A, Wu Q, Zhang X, Batistic O, Alquraishi SA, Kudla J, An C, and Rodriguez PL
- Subjects
- Active Transport, Cell Nucleus drug effects, Acyltransferases metabolism, Arabidopsis genetics, Cell Nucleus drug effects, Cell Nucleus metabolism, Down-Regulation drug effects, Myristic Acid metabolism, Plant Growth Regulators pharmacology, Plants, Genetically Modified, Protein Binding drug effects, Proteolysis drug effects, Ubiquitination drug effects, Abscisic Acid pharmacology, Arabidopsis metabolism, Protein Phosphatase 2C metabolism, Ubiquitin-Protein Ligases metabolism
- Abstract
Hormone- and stress-induced shuttling of signaling or regulatory proteins is an important cellular mechanism to modulate hormone signaling and cope with abiotic stress. Hormone-induced ubiquitination plays a crucial role to determine the half-life of key negative regulators of hormone signaling. For ABA signaling, the degradation of clade-A PP2Cs, such as PP2CA or ABI1, is a complementary mechanism to PYR/PYL/RCAR-mediated inhibition of PP2C activity. ABA promotes the degradation of PP2CA through the RGLG1 E3 ligase, although it is not known how ABA enhances the interaction of RGLG1 with PP2CA given that they are predominantly found in the plasma membrane and the nucleus, respectively. We demonstrate that ABA modifies the subcellular localization of RGLG1 and promotes nuclear interaction with PP2CA. We found RGLG1 is myristoylated in vivo, which facilitates its attachment to the plasma membrane. ABA inhibits the myristoylation of RGLG1 through the downregulation of N-myristoyltransferase 1 (NMT1) and promotes nuclear translocation of RGLG1 in a cycloheximide-insensitive manner. Enhanced nuclear recruitment of the E3 ligase was also promoted by increasing PP2CA protein levels and the formation of RGLG1-receptor-phosphatase complexes. We show that RGLG1
Gly2Ala mutated at the N-terminal myristoylation site shows constitutive nuclear localization and causes an enhanced response to ABA and salt or osmotic stress. RGLG1/5 can interact with certain monomeric ABA receptors, which facilitates the formation of nuclear complexes such as RGLG1-PP2CA-PYL8. In summary, we provide evidence that an E3 ligase can dynamically relocalize in response to both ABA and increased levels of its target, which reveals a mechanism to explain how ABA enhances RGLG1-PP2CA interaction and hence PP2CA degradation., (© 2019 The Authors The Plant Journal © 2019 John Wiley & Sons Ltd.)- Published
- 2019
- Full Text
- View/download PDF
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