173 results on '"Krumkamp, R"'
Search Results
2. Culex torrentium mosquitoes from Germany are negative for Wolbachia
- Author
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LEGGEWIE, M., KRUMKAMP, R., BADUSCHE, M., HEITMANN, A., JANSEN, S., SCHMIDT‐CHANASIT, J., TANNICH, E., and BECKER, S. C.
- Published
- 2018
- Full Text
- View/download PDF
3. Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis
- Author
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Murray, CJL, Ikuta, KS, Sharara, F, Swetschinski, L, Aguilar, GR, Gray, A, Han, C, Bisignano, C, Rao, P, Wool, E, Johnson, SC, Browne, AJ, Chipeta, MG, Fell, F, Hackett, S, Haines-Woodhouse, G, Hamadani, BHK, Kumaran, EAP, McManigal, B, Agarwal, R, Akech, S, Albertson, S, Amuasi, J, Andrews, J, Aravkin, A, Ashley, E, Bailey, F, Baker, S, Basnyat, B, Bekker, A, Bender, R, Bethou, A, Bielicki, J, Boonkasidecha, S, Bukosia, J, Carvalheiro, C, Castaneda-Orjuela, C, Chansamouth, V, Chaurasia, S, Chiurchiu, S, Chowdhury, F, Cook, AJ, Cooper, B, Cressey, TR, Criollo-Mora, E, Cunningham, M, Darboe, S, Day, NPJ, De Luca, M, Dokova, K, Dramowski, A, Dunachie, SJ, Eckmanns, T, Eibach, D, Emami, A, Feasey, N, Fisher-Pearson, N, Forrest, K, Garrett, D, Gastmeier, P, Giref, AZ, Greer, RC, Gupta, V, Haller, S, Haselbeck, A, Hay, S, Holm, M, Hopkins, S, Iregbu, KC, Jacobs, J, Jarovsky, D, Javanmardi, F, Khorana, M, Kissoon, N, Kobeissi, E, Kostyanev, T, Krapp, F, Krumkamp, R, Kumar, A, Kyu, HH, Lim, C, Limmathurotsakul, D, Loftus, MJ, Lunn, M, Ma, J, Mturi, N, Munera-Huertas, T, Musicha, P, Mussi-Pinhata, MM, Nakamura, T, Nanavati, R, Nangia, S, Newton, P, Ngoun, C, Novotney, A, Nwakanma, D, Obiero, CW, Olivas-Martinez, A, Olliaro, P, Ooko, E, Ortiz-Brizuela, E, Peleg, AY, Perrone, C, Plakkal, N, Ponce-de-Leon, A, Raad, M, Ramdin, T, Riddell, A, Roberts, T, VictoriaRobotham, J, Roca, A, Rudd, KE, Russell, N, Schnall, J, Scott, JAG, Shivamallappa, M, Sifuentes-Osornio, J, Steenkeste, N, Stewardson, AJ, Stoeva, T, Tasak, N, Thaiprakong, A, Thwaites, G, Turner, C, Turner, P, van Doorn, HR, Velaphi, S, Vongpradith, A, Huong, V, Walsh, T, Waner, S, Wangrangsimakul, T, Wozniak, T, Zheng, P, Sartorius, B, Lopez, AD, Stergachis, A, Moore, C, Dolecek, C, Naghavi, M, Murray, CJL, Ikuta, KS, Sharara, F, Swetschinski, L, Aguilar, GR, Gray, A, Han, C, Bisignano, C, Rao, P, Wool, E, Johnson, SC, Browne, AJ, Chipeta, MG, Fell, F, Hackett, S, Haines-Woodhouse, G, Hamadani, BHK, Kumaran, EAP, McManigal, B, Agarwal, R, Akech, S, Albertson, S, Amuasi, J, Andrews, J, Aravkin, A, Ashley, E, Bailey, F, Baker, S, Basnyat, B, Bekker, A, Bender, R, Bethou, A, Bielicki, J, Boonkasidecha, S, Bukosia, J, Carvalheiro, C, Castaneda-Orjuela, C, Chansamouth, V, Chaurasia, S, Chiurchiu, S, Chowdhury, F, Cook, AJ, Cooper, B, Cressey, TR, Criollo-Mora, E, Cunningham, M, Darboe, S, Day, NPJ, De Luca, M, Dokova, K, Dramowski, A, Dunachie, SJ, Eckmanns, T, Eibach, D, Emami, A, Feasey, N, Fisher-Pearson, N, Forrest, K, Garrett, D, Gastmeier, P, Giref, AZ, Greer, RC, Gupta, V, Haller, S, Haselbeck, A, Hay, S, Holm, M, Hopkins, S, Iregbu, KC, Jacobs, J, Jarovsky, D, Javanmardi, F, Khorana, M, Kissoon, N, Kobeissi, E, Kostyanev, T, Krapp, F, Krumkamp, R, Kumar, A, Kyu, HH, Lim, C, Limmathurotsakul, D, Loftus, MJ, Lunn, M, Ma, J, Mturi, N, Munera-Huertas, T, Musicha, P, Mussi-Pinhata, MM, Nakamura, T, Nanavati, R, Nangia, S, Newton, P, Ngoun, C, Novotney, A, Nwakanma, D, Obiero, CW, Olivas-Martinez, A, Olliaro, P, Ooko, E, Ortiz-Brizuela, E, Peleg, AY, Perrone, C, Plakkal, N, Ponce-de-Leon, A, Raad, M, Ramdin, T, Riddell, A, Roberts, T, VictoriaRobotham, J, Roca, A, Rudd, KE, Russell, N, Schnall, J, Scott, JAG, Shivamallappa, M, Sifuentes-Osornio, J, Steenkeste, N, Stewardson, AJ, Stoeva, T, Tasak, N, Thaiprakong, A, Thwaites, G, Turner, C, Turner, P, van Doorn, HR, Velaphi, S, Vongpradith, A, Huong, V, Walsh, T, Waner, S, Wangrangsimakul, T, Wozniak, T, Zheng, P, Sartorius, B, Lopez, AD, Stergachis, A, Moore, C, Dolecek, C, and Naghavi, M
- Abstract
BACKGROUND: Antimicrobial resistance (AMR) poses a major threat to human health around the world. Previous publications have estimated the effect of AMR on incidence, deaths, hospital length of stay, and health-care costs for specific pathogen-drug combinations in select locations. To our knowledge, this study presents the most comprehensive estimates of AMR burden to date. METHODS: We estimated deaths and disability-adjusted life-years (DALYs) attributable to and associated with bacterial AMR for 23 pathogens and 88 pathogen-drug combinations in 204 countries and territories in 2019. We obtained data from systematic literature reviews, hospital systems, surveillance systems, and other sources, covering 471 million individual records or isolates and 7585 study-location-years. We used predictive statistical modelling to produce estimates of AMR burden for all locations, including for locations with no data. Our approach can be divided into five broad components: number of deaths where infection played a role, proportion of infectious deaths attributable to a given infectious syndrome, proportion of infectious syndrome deaths attributable to a given pathogen, the percentage of a given pathogen resistant to an antibiotic of interest, and the excess risk of death or duration of an infection associated with this resistance. Using these components, we estimated disease burden based on two counterfactuals: deaths attributable to AMR (based on an alternative scenario in which all drug-resistant infections were replaced by drug-susceptible infections), and deaths associated with AMR (based on an alternative scenario in which all drug-resistant infections were replaced by no infection). We generated 95% uncertainty intervals (UIs) for final estimates as the 25th and 975th ordered values across 1000 posterior draws, and models were cross-validated for out-of-sample predictive validity. We present final estimates aggregated to the global and regional level. FINDINGS: On the bas
- Published
- 2022
4. Extrapolating respiratory tract infection incidences to a rural area of Ghana using a probability model for hospital attendance
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Krumkamp, R., Schwarz, N.G., Sarpong, N., Loag, W., Zeeb, H., Adu-Sarkodie, Y., and May, J.
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- 2012
- Full Text
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5. Health service resource needs for pandemic influenza in developing countries: a linked transmission dynamics, interventions and resource demand model
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KRUMKAMP, R., KRETZSCHMAR, M., RUDGE, J. W., AHMAD, A., HANVORAVONGCHAI, P., WESTENHOEFER, J., STEIN, M., PUTTHASRI, W., and COKER, R.
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- 2011
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6. Comparative genomics revealed adaptive admixture in Cryptosporidium hominis in Africa
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Tichkule, S, Jex, AR, van Oosterhout, C, Sannella, AR, Krumkamp, R, Aldrich, C, Maiga-Ascofare, O, Dekker, D, Lamshoeft, M, Mbwana, J, Rakotozandrindrainy, N, Borrmann, S, Thye, T, Schuldt, K, Winter, D, Kremsner, PG, Oppong, K, Manouana, P, Mbong, M, Gesase, S, Minja, DTR, Mueller, I, Bahlo, M, Nader, J, May, J, Rakotozandrindrain, R, Adegnika, AA, Lusingu, JPA, Amuasi, J, Eibach, D, Caccio, SM, Tichkule, S, Jex, AR, van Oosterhout, C, Sannella, AR, Krumkamp, R, Aldrich, C, Maiga-Ascofare, O, Dekker, D, Lamshoeft, M, Mbwana, J, Rakotozandrindrainy, N, Borrmann, S, Thye, T, Schuldt, K, Winter, D, Kremsner, PG, Oppong, K, Manouana, P, Mbong, M, Gesase, S, Minja, DTR, Mueller, I, Bahlo, M, Nader, J, May, J, Rakotozandrindrain, R, Adegnika, AA, Lusingu, JPA, Amuasi, J, Eibach, D, and Caccio, SM
- Abstract
Cryptosporidiosis is a major cause of diarrhoeal illness among African children, and is associated with childhood mortality, malnutrition, cognitive development and growth retardation. Cryptosporidium hominis is the dominant pathogen in Africa, and genotyping at the glycoprotein 60 (gp60) gene has revealed a complex distribution of different subtypes across this continent. However, a comprehensive exploration of the metapopulation structure and evolution based on whole-genome data has yet to be performed. Here, we sequenced and analysed the genomes of 26 C. hominis isolates, representing different gp60 subtypes, collected at rural sites in Gabon, Ghana, Madagascar and Tanzania. Phylogenetic and cluster analyses based on single-nucleotide polymorphisms showed that isolates predominantly clustered by their country of origin, irrespective of their gp60 subtype. We found a significant isolation-by-distance signature that shows the importance of local transmission, but we also detected evidence of hybridization between isolates of different geographical regions. We identified 37 outlier genes with exceptionally high nucleotide diversity, and this group is significantly enriched for genes encoding extracellular proteins and signal peptides. Furthermore, these genes are found more often than expected in recombinant regions, and they show a distinct signature of positive or balancing selection. We conclude that: (1) the metapopulation structure of C. hominis can only be accurately captured by whole-genome analyses; (2) local anthroponotic transmission underpins the spread of this pathogen in Africa; (3) hybridization occurs between distinct geographical lineages; and (4) genetic introgression provides novel substrate for positive or balancing selection in genes involved in host-parasite coevolution.
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- 2021
7. Controlled human malaria infection with Plasmodium falciparum demonstrates impact of naturally acquired immunity on virulence gene expression
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Rowe, A, Bachmann, A, Bruske, E, Krumkamp, R, Turners, L, Wichers, JS, Petter, M, Held, J, Duffy, MF, Sim, BKL, Hoffman, SL, Kremsner, PG, Lell, B, Laystsen, T, Frank, M, Mordmueller, B, Tannich, E, Rowe, A, Bachmann, A, Bruske, E, Krumkamp, R, Turners, L, Wichers, JS, Petter, M, Held, J, Duffy, MF, Sim, BKL, Hoffman, SL, Kremsner, PG, Lell, B, Laystsen, T, Frank, M, Mordmueller, B, and Tannich, E
- Abstract
The pathogenesis of Plasmodium falciparum malaria is linked to the variant surface antigen PfEMP1, which mediates tethering of infected erythrocytes to the host endothelium and is encoded by approximately 60 var genes per parasite genome. Repeated episodes of malaria infection result in the gradual acquisition of protective antibodies against PfEMP1 variants. The antibody repertoire is believed to provide a selective pressure driving the clonal expansion of parasites expressing unrecognized PfEMP1 variants, however, due to the lack of experimental in vivo models there is only limited experimental evidence in support of this concept. To get insight into the impact of naturally acquired immunity on the expressed var gene repertoire early during infection we performed controlled human malaria infections of 20 adult African volunteers with life-long malaria exposure using aseptic, purified, cryopreserved P. falciparum sporozoites (Sanaria PfSPZ Challenge) and correlated serological data with var gene expression patterns from ex vivo parasites. Among the 10 African volunteers who developed patent infections, individuals with low antibody levels showed a steep rise in parasitemia accompanied by broad activation of multiple, predominantly subtelomeric var genes, similar to what we previously observed in naïve volunteers. In contrast, individuals with intermediate antibody levels developed asymptomatic infections and the ex vivo parasite populations expressed only few var gene variants, indicative of clonal selection. Importantly, in contrast to parasites from naïve volunteers, expression of var genes coding for endothelial protein C receptor (EPCR)-binding PfEMP1 that are associated with severe childhood malaria was rarely detected in semi-immune adult African volunteers. Moreover, we followed var gene expression for up to six parasite replication cycles and demonstrated for the first time in vivo a shift in the dominant var gene variant. In conclusion, our data suggest th
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- 2019
8. The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa
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Park, SE, Pham, DT, Boinett, C, Wong, VK, Pak, GD, Panzner, U, Espinoza, LMC, Von Kalckreuth, V, Im, J, Schütt-Gerowitt, H, Crump, JA, Breiman, RF, Adu-Sarkodie, Y, Owusu-Dabo, E, Rakotozandrindrainy, R, Soura, AB, Aseffa, A, Gasmelseed, N, Keddy, KH, May, J, Sow, AG, Aaby, P, Biggs, HM, Hertz, JT, Montgomery, JM, Cosmas, L, Olack, B, Fields, B, Sarpong, N, Razafindrabe, TJL, Raminosoa, TM, Kabore, LP, Sampo, E, Teferi, M, Yeshitela, B, Tayeb, MA, Sooka, A, Meyer, CG, Krumkamp, R, Dekker, DM, Jaeger, A, Poppert, S, Tall, A, Niang, A, Bjerregaard-Andersen, M, Løfberg, SV, Seo, HJ, Jeon, HJ, Deerin, JF, Park, J, Konings, F, Ali, M, Clemens, JD, Hughes, P, Sendagala, JN, Vudriko, T, Downing, R, Ikumapayi, UN, Mackenzie, GA, Obaro, S, Argimon, S, Aanensen, DM, Page, A, Keane, JA, Duchene, S, Dyson, Z, Holt, KE, Dougan, G, Marks, F, Baker, S, Park, Se Eun [0000-0002-1632-3045], Aseffa, Abraham [0000-0002-8028-1150], May, Jürgen [0000-0001-7831-8420], Ali, Mohammad [0000-0003-1410-388X], Dyson, Zoe [0000-0002-8887-3492], Holt, Kathryn E [0000-0003-3949-2471], Marks, Florian [0000-0002-6043-7170], and Apollo - University of Cambridge Repository
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Genotype ,Science ,Incidence ,Genetic Variation ,Salmonella typhi ,bacterial infections and mycoses ,complex mixtures ,Article ,Anti-Bacterial Agents ,Phylogeography ,Drug Resistance, Multiple, Bacterial ,Salmonella Infections ,parasitic diseases ,Humans ,lcsh:Q ,Typhoid Fever ,lcsh:Science ,Africa South of the Sahara ,Phylogeny - Abstract
There is paucity of data regarding the geographical distribution, incidence, and phylogenetics of multi-drug resistant (MDR) Salmonella Typhi in sub-Saharan Africa. Here we present a phylogenetic reconstruction of whole genome sequenced 249 contemporaneous S. Typhi isolated between 2008-2015 in 11 sub-Saharan African countries, in context of the 2,057 global S. Typhi genomic framework. Despite the broad genetic diversity, the majority of organisms (225/249; 90%) belong to only three genotypes, 4.3.1 (H58) (99/249; 40%), 3.1.1 (97/249; 39%), and 2.3.2 (29/249; 12%). Genotypes 4.3.1 and 3.1.1 are confined within East and West Africa, respectively. MDR phenotype is found in over 50% of organisms restricted within these dominant genotypes. High incidences of MDR S. Typhi are calculated in locations with a high burden of typhoid, specifically in children aged, Typhoid fever is caused by the bacterium Salmonella Typhi. Here, Park et al. analyse the genomes of 249 S. Typhi isolates from 11 sub-Saharan African countries, identifying genes and plasmids associated with antibiotic resistance and showing that multi-drug resistance is highly pervasive in sub-Saharan Africa.
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- 2018
9. A simple laboratory algorithm for diagnosis of melioidosis in resource-constrained areas: a study from north-central Vietnam
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Trinh, T.T., primary, Hoang, T.S., additional, Tran, D.A., additional, Trinh, V.T., additional, Göhler, A., additional, Nguyen, T.T., additional, Hoang, S.N., additional, Krumkamp, R., additional, Nguyen, L.T.N., additional, May, J., additional, Doan, P.M., additional, Do, C.D., additional, Que, T.A., additional, and Steinmetz, I., additional
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- 2018
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10. Culex torrentiummosquitoes from Germany are negative forWolbachia
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LEGGEWIE, M., primary, KRUMKAMP, R., additional, BADUSCHE, M., additional, HEITMANN, A., additional, JANSEN, S., additional, SCHMIDT-CHANASIT, J., additional, TANNICH, E., additional, and BECKER, S. C., additional
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- 2017
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11. Co-diagnoses in hospitalised children – revealing the cause of admission in a malaria endemic area
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Krumkamp, R, additional, Hogan, B, additional, Eibach, D, additional, Sarpong, N, additional, Kreuels, B, additional, Maiga-Ascofaré, O, additional, Adu-Sarkodie, Y, additional, Owusu-Dabo, E, additional, and May, J, additional
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- 2017
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12. Malaria Elimination mittels synchronisierter Massenverabreichung – ein mathematisches Modell
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Krumkamp, R, additional and Zimmermann, M, additional
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- 2017
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13. Mobile phone-based interactive voice response as a tool for improving access to healthcare in remote areas in Ghana - an evaluation of user experiences
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Brinkel, J., primary, May, J., additional, Krumkamp, R., additional, Lamshöft, M., additional, Kreuels, B., additional, Owusu-Dabo, E., additional, Mohammed, A., additional, Bonacic Marinovic, A., additional, Dako-Gyeke, P., additional, Krämer, A., additional, and Fobil, J. N., additional
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- 2017
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14. Mosquito Passage Dramatically Changes var Gene Expression in Controlled Human Plasmodium falciparum Infections
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Dzikowski, R, Bachmann, A, Petter, M, Krumkamp, R, Esen, M, Held, J, Scholz, JAM, Li, T, Sim, BKL, Hoffman, SL, Kremsner, PG, Mordmueller, B, Duffy, MF, Tannich, E, Dzikowski, R, Bachmann, A, Petter, M, Krumkamp, R, Esen, M, Held, J, Scholz, JAM, Li, T, Sim, BKL, Hoffman, SL, Kremsner, PG, Mordmueller, B, Duffy, MF, and Tannich, E
- Abstract
Virulence of the most deadly malaria parasite Plasmodium falciparum is linked to the variant surface antigen PfEMP1, which is encoded by about 60 var genes per parasite genome. Although the expression of particular variants has been associated with different clinical outcomes, little is known about var gene expression at the onset of infection. By analyzing controlled human malaria infections via quantitative real-time PCR, we show that parasite populations from 18 volunteers expressed virtually identical transcript patterns that were dominated by the subtelomeric var gene group B and, to a lesser extent, group A. Furthermore, major changes in composition and frequency of var gene transcripts were detected between the parental parasite culture that was used to infect mosquitoes and Plasmodia recovered from infected volunteers, suggesting that P. falciparum resets its var gene expression during mosquito passage and starts with the broad expression of a specific subset of var genes when entering the human blood phase.
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- 2016
15. Effects of urbanicity on malaria and the development of immunity – results from a hospital based study in Ghana
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Frank, C, Krumkamp, R, Sarpong, N, Sothmann, P, Owusu-Dabo, E, May, J, and Kreuels, B
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ddc: 610 ,610 Medical sciences ,Medicine - Abstract
Introduction: Malaria incidence has declined considerably over the last decade. This is partly due to a scale-up of control measures but may also be driven by a decline of vector populations due to urbanisation. The aim of this study was to analyse, on a micro-epidemiological scale, the association [for full text, please go to the a.m. URL], 11th Malaria Meeting
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- 2014
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16. Tropheryma whipplei in children with diarrhoea in rural Ghana
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Vinnemeier, C.D., primary, Klupp, E.M., additional, Krumkamp, R., additional, Rolling, T., additional, Fischer, N., additional, Owusu-Dabo, E., additional, Addo, M.M., additional, Adu-Sarkodie, Y., additional, Käsmaier, J., additional, Aepfelbacher, M., additional, Cramer, J.P., additional, May, J., additional, and Tannich, E., additional
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- 2016
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17. Prevention and Control of Infectious Diseases with Pandemic Potential: The EU-Project SARSControl
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Ahmad, Riris, Krumkamp, R, Richardus, Jan hendrik, Reintjes, R, and Public Health
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SDG 3 - Good Health and Well-being - Abstract
Introduction: The influenza pandemics of the 20(th) century, the SARS epidemic in 2002/03 and the growing number of human cases infected with the H5N1 avian influenza virus clearly demonstrate that the threat of new pandemics is very real. These events have intensified pandemic prevention and control activities worldwide. "SARSControl" is a three-year project funded by the European Commission with the objective to aid European member states in the public health management of new emerging infections. This article summarises the main research results and recommendations arising from this project. Method: The reports and papers published in the SARSControl project form the basis of this article. In addition, a literature search for SARS and pandemic influenza was conducted and information on pandemic planning and management guidelines obtained from the WHO and EU websites. The project results are discussed in this context. Results: A lack of knowledge and delayed international communication resulted in the rapid spread of SARS, highlighting the importance of a global system for rapid and transparent information transfer. Epidemiological and economic modelling studies have shown that, in comparison to travel restrictions, applying intervention measures to interrupt local transmission within a Country and investing into vaccine research and anti-viral stockpiling, is a more cost-effective and efficient use of resources for the containment of pandemics. A study investigating the perceived threat associated with pandemics showed that the subjective risk perception of people varies among countries. This influences human behaviour and should hence be considered during risk communication and implementation of pandemic control measures. Discussion: The basic prerequistes of an efficient pandemic management are operationalisable pandemic plans, subjected to regular exercises, backed by adequate resources and a sound health-care infrastructure. At international level cross-border co-operation and information exchange on infection control is the key to pandemic mitigation and containment. Strengthening a surveillance systems at the international level, to allow the timely monitoring of infectious agents and outbreaks is essential. Transferring such outbreak information in real time into mathematical models and the resulting essential epidemiological information to policy makers would facilitate a more efficient use of scarce resources. Involvement of the public in decisions regarding the implementation of restrictive control measures which often curtail individual liberty is necessary for the acceptance and ultimate success of pandemic control.
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- 2009
18. Pandemieplanung europäischer Staaten am Beispiel von SARS - Workshop zur Erhebung von Expertenmeinungen
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Krumkamp, R, Reintjes, R, and Kassen, A
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ddc: 610 - Published
- 2007
19. Ethical issues in SARS control - a framework for decision making in public health
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Schipf, S, Wehkamp, K, Krumkamp, R, and Reintjes, R
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ddc: 610 ,public health ,framework for decision making ,SARS control ,infectious diseases ,ethics - Published
- 2007
20. Impact of public health interventions in controlling the spread of SARS - Modelling intervention scenarios
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Krumkamp, R, Duerr, HP, Kassen, A, Eichner, M, and Reintjes, R
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ddc: 610 - Published
- 2007
21. Case-Case-Studie eines Salmonelloseausbruchs in Hamburg-Altona: ein epidemiologisches Analysewerkzeug für Surveillancedaten
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Krumkamp, R and Reintjes, R
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ddc: 610 - Published
- 2005
22. Randomized, Placebo-Controlled Trial or Post Hoc Subgroup Analysis: The Importance of Standardized and Comprehensive Reporting
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Karch, A., primary, Krumkamp, R., additional, and Kreuels, B., additional
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- 2014
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23. Atemwegserkrankungen in der Ashanti Provinz in Ghana: Inzidenzextrapolation mittels Krankenhausdaten und einem Modell zur Bestimmung der Wahrscheinlichkeit eines Krankenhausbesuches
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Krumkamp, R, Schwarz, NG, Loag, W, Sarpong, N, Adu-Sarkodie, Y, Zeeb, H, May, J, Krumkamp, R, Schwarz, NG, Loag, W, Sarpong, N, Adu-Sarkodie, Y, Zeeb, H, and May, J
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- 2011
24. Prevention and control of infectious diseases with pandemic potential: The EU-project SARSControl
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Ahmad, R.A. (Riris), Krumkamp, R. (R.), Richardus, J.H. (Jan Hendrik), Reintjes, R. (R.), Ahmad, R.A. (Riris), Krumkamp, R. (R.), Richardus, J.H. (Jan Hendrik), and Reintjes, R. (R.)
- Abstract
Introduction: The influenza pandemics of the 20 th century, the SARS epidemic in 2002 / 03 and the growing number of human cases infected with the H5N1 avian infl uenza virus clearly demonstrate that the threat of new pandemics is very real. These events have intensifi ed pandemic prevention and control activities worldwide. " SARSControl " is a three-year project funded by the European Commission with the objective to aid European member states in the public health management of new emerging infections. This article summarises the main research results and recommendations arising from this project. Method: The reports and papers published in the SARSControl project form the basis of this article. In addition, a literature search for SARS and pandemic infl uenza was conducted and information on pandemic planning and management guidelines obtained from the WHO and EU websites. The project results are discussed in this context. Results: A lack of knowledge and delayed international communication resulted in the rapid spread of SARS, highlighting the importance of a global system for rapid and transparent information transfer. Epidemiological and economic modelling studies have shown that, in comparison to travel restrictions, applying intervention measures to interrupt local transmission within a country and investing into vaccine research and anti-viral stockpiling, is a more cost-eff ective and effi cient use of resources for the containment of pandemics. A study investigating the perceived threat associated with pandemics showed that the subjective risk perception of people varies among countries. This infl uences human behaviour and should hence be considered during risk communication and implementation of pandemic control measures. Discussion: The basic prerequistes of an effi cient pandemic management are operationalisable pandemic plans, subjected to regular exercises, backed by adequate resources and a sound health-care infrastructure. At international level c
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- 2009
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- View/download PDF
25. Gastrointestinal infections in Ghanaian children – disease agents and associated symptoms
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Krumkamp, R., primary, Acquah, S., additional, Adu-Sarkodie, Y., additional, Adelkofer, J., additional, Sarpong, N., additional, Jäger, A., additional, Tannich, E., additional, and May, J., additional
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- 2012
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26. Incidence of invasive Salmonella infections in Agogo, Ghana
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Marks, F., primary, Cruz Espinoza, L., additional, Adu-Sarkodie, Y., additional, Sarpong, N., additional, Krumkamp, R., additional, Loag, W., additional, Wierzba, T.F., additional, Meyer, C., additional, and May, J., additional
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- 2012
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27. Developing policy options for SARS and SARS-like diseases – a Delphi study
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Syed, A.M., primary, Hjarnoe, L., additional, Krumkamp, R., additional, Reintjes, R., additional, and Aro, A.R., additional
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- 2010
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28. Health service resource needs for pandemic influenza in developing countries: a linked transmission dynamics, interventions and resource demand model
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KRUMKAMP, R., primary, KRETZSCHMAR, M., additional, RUDGE, J. W., additional, AHMAD, A., additional, HANVORAVONGCHAI, P., additional, WESTENHOEFER, J., additional, STEIN, M., additional, PUTTHASRI, W., additional, and COKER, R., additional
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- 2010
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29. A novel methodological approach to systematically analyse pandemic influenza response programs within health systems
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Ahmad, A, primary, Krumkamp, R, additional, Mounier-Jack, S, additional, Reintjes, R, additional, and Coker, R, additional
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- 2010
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30. Pandemic influenza response capacities in Thailand: modelling health service resource gaps
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Krumkamp, R, primary, Putthasri, W, additional, Rudge, J, additional, Ahmad, A, additional, Reintjes, R, additional, Hanvoravongchai, P, additional, and Coker, R, additional
- Published
- 2010
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31. Prävention und Kontrolle von pandemischen Infektionskrankheiten: Das EU-Projekt SARSControl
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Ahmad, A., primary, Krumkamp, R., additional, Richardus, J. H., additional, and Reintjes, R., additional
- Published
- 2009
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32. Infektionsepidemiologische Methoden für den ÖGD: Fall-Kontrollfall-Vergleiche als Brücke zwischen Praxis, Surveillance und Epidemiologie
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Reintjes, R, primary and Krumkamp, R, additional
- Published
- 2005
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33. Influenza - insights from mathematical modeling.
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Mikolajczyk R, Krumkamp R, Bornemann R, Ahmad A, Schwehm M, and Duerr H
- Abstract
Background: When the first cases of a new infectious disease appear, questions arise about the further course of the epidemic and about the appropriate interventions to be taken to protect individuals and the public as a whole. Mathematical models can help answer these questions. In this article, the authors describe basic concepts in the mathematical modelling of infectious diseases, illustrate their use with a simple example, and present the results of influenza models.Method: Description of the mathematical modelling of infectious diseases and selective review of the literature.Results: The two fundamental concepts of mathematical modelling of infectious diseases--the basic reproduction number and the generation time--allow a better understanding of the course of an epidemic. Modelling studies based on past influenza epidemics suggest that the rise of the epidemic curve can be slowed at the beginning of the epidemic by isolating ill persons and giving prophylactic medications to their contacts. Later on in the course of the epidemic, restricting the number of contacts (e.g., by closing schools) may mitigate the epidemic but will only have a limited effect on the total number of persons who contract the disease.Conclusion: Mathematical modelling is a valuable tool for understanding the dynamics of an epidemic and for planning and evaluating interventions. [ABSTRACT FROM AUTHOR]
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- 2009
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34. Controlling SARS: a review on China's response compared with other SARS-affected countries.
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Ahmad A, Krumkamp R, Reintjes R, Ahmad, Amena, Krumkamp, Ralf, and Reintjes, Ralf
- Abstract
Objective: To summarise the major control measures implemented by severe acute respiratory syndrome (SARS)-affected countries and to compare distinctive features of the Chinese approach to other affected Asian countries and Canada.Method: Literature review.Results: The realisation in March 2003 that SARS was spreading led affected countries to introduce measures such as rapid dissemination of information, early case detection and isolation, tracing and quarantining of SARS contacts, traveller screening, raising public awareness of risk and institution of stricter infection control in health care settings. SARS became a notifiable disease in China in mid-April 2003, after which introduction of efficient nationwide control measures led to containment within 2 months. Countries differed in the timeliness of implementing control measures, the mode and extent to which these were enforced and in the resources available to do so.Conclusion: SARS challenged the political and public health systems of all affected countries. It demanded rapid and decisive action to be taken, yet the comparison shows how difficult this was for an unknown new disease. Guangdong reacted rapidly but this pace was not continued by China for some time, which facilitated national and international spread. Once the Chinese government changed its policy, it developed an impressive control strategy involving the public which culminated in containment. The significance of timely information was perhaps the main lesson which the SARS epidemic taught. [ABSTRACT FROM AUTHOR]- Published
- 2009
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35. Case-case study of a Salmonella outbreak: an epidemiologic method to analyse surveillance data.
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Krumkamp R, Reintjes R, and Dirksen-Fischer M
- Abstract
Abstract: Routine infectious disease surveillance data has to be analysed quickly in order to prevent further disease transmission. This can be done by using epidemiological studies, such as case–control studies. However, these studies are complex to perform and susceptible for biases. An alternative is the case–case study design which is less prone to such limitations. So far mainly methodological publications of this study design exist. In this investigation, outbreak cases are compared with cases infected with the same disease. A Salmonella outbreak was analysed with a case–case study design in order to test the applicability of this method. The analysis showed significant associations to the consumption beef (OR 11.8; 95% CI 2.4–66.7; p<0.001) and pork (OR 8.44; 95% CI 1.7–46.4; p<0.001). A case–control study on the same outbreak confirmed these results. An infected control group is very comparable to the outbreak cluster, which limits selection and recall bias. However, the calculated OR has to be interpreted in context with the study design. The case–case study design has proven to be a useful tool to analyse surveillance data. It was easy to perform and had methodological benefits. [Copyright &y& Elsevier]
- Published
- 2008
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36. Influenza-Insights from Mathematical Modelling
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Mikolajczyk, R., Krumkamp, R., Reinhard Bornemann, Ahmad, A., Schwehm, M., and Duerr, H.
- Subjects
prevention ,disease course ,Review Article ,influenza ,infection control ,epidemic - Abstract
Background: When the first cases of a new infectious disease appear, questions arise about the further course of the epidemic and about the appropriate interventions to be taken to protect individuals and the public as a whole. Mathematical models can help answer these questions. In this article, the authors describe basic concepts in the mathematical modelling of infectious diseases, illustrate their use with a simple example, and present the results of influenza models. Method: Description of the mathematical modelling of infectious diseases and selective review of the literature. Results: The two fundamental concepts of mathematical modelling of infectious diseases-the basic reproduction number and the generation time-allow a better understanding of the course of an epidemic. Modelling studies based on past influenza epidemics suggest that the rise of the epidemic curve can be slowed at the beginning of the epidemic by isolating ill persons and giving prophylactic medications to their contacts. Later on in the course of the epidemic, restricting the number of contacts (e.g., by closing schools) may mitigate the epidemic but will only have a limited effect on the total number of persons who contract the disease. Conclusion: Mathematical modelling is a valuable tool for understanding the dynamics of an epidemic and for planning and evaluating interventions.
37. Virus Load Kinetics in Lassa Fever Patients Treated With Ribavirin: A Retrospective Cohort Study From Southern Nigeria.
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Ogbaini-Emovon E, Akpede G, Okogbenin S, Osagiede E, Tobin E, Asogun D, Okokhere P, Okonofua M, Akpede N, Akhideno P, Erameh C, Rafiu M, Azubuike C, Iraoya K, Iruolagbe C, Erohubie C, Ahmed D, Ediawe O, Okoguale J, Eifediyi R, Odia I, Agbukor J, Adomeh D, Odike MAC, Ovienria W, Elkanem A, Muoebenam EB, Ojide KC, Pallasch E, Müller J, Hinzmann J, Günther S, Pahlmann M, Thielebein A, Duraffour S, Oestereich L, and Krumkamp R
- Abstract
Background: The standard of care for Lassa fever is the use of ribavirin with supportive therapy. There is little information on the course of viremia and its relationship with clinical outcomes in patients treated with ribavirin., Methods: We conducted a retrospective analysis of virologic and clinical parameters of 152 reverse transcription polymerase chain reaction-confirmed Lassa fever cases admitted and treated with ribavirin therapy. We describe the Lassa virus RNA kinetics in blood in relation to the clinical course of the patients., Results: The overall mortality was 9%. The median duration (interquartile range [IQR]) of illness before admission was 8 (5-12) days. Median (IQR) Ct values on admission ( t
0 ) were lower among patients who died (21 [20-27]) than in those who survived (34 [30-37]; P < .01). The receiver operating characteristics curve of the association between outcome and Ct value at t0 had a high classification performance, with an AUC of 0.92 (95% CI, 0.86-0.98). The median time to viral clearance (IQR) was 10 (5-15) days. The viral load decreased steadily with the duration of treatment, and all survivors achieved viral clearance within 25 days of hospitalization., Conclusions: Our study demonstrates that the Ct value on admission has prognostic value and Lassa fever patients treated with ribavirin typically clear the virus within 3-4 weeks of hospitalization. This kinetics has implications for the design of clinical case management and future clinical trial protocols., Competing Interests: Potential conflicts of interest. The authors: no reported conflicts of interest., (© The Author(s) 2024. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)- Published
- 2024
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38. Influenza in travelers from Germany returning from abroad: a retrospective case-control study.
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Brehm TT, Shijaku F, Krumkamp R, Jochum J, Hoffmann A, Ramharter M, and Kreuels B
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- Humans, Germany epidemiology, Male, Female, Middle Aged, Case-Control Studies, Retrospective Studies, Adult, Aged, Vaccination statistics & numerical data, Young Adult, Adolescent, Antiviral Agents therapeutic use, Seasons, Aged, 80 and over, Influenza, Human epidemiology, Influenza, Human drug therapy, Travel statistics & numerical data, Influenza Vaccines administration & dosage
- Abstract
Background: Influenza is the most common vaccine-preventable infection among travelers, affecting approximately one percent of those travelling to subtropical and tropical destinations., Methods: We analysed demographic, travel-related and clinical information from travelers diagnosed with influenza at our travel clinic between January 2015 and March 2020 and influenza-negative controls., Results: We included 68 travelers diagnosed with influenza and 207 controls. In total, 22.1% of influenza patients (n = 15) were older than 60 years and/or had comorbidities for which annual influenza vaccination is recommended, but only one had received an influenza vaccine. Patients with respiratory and musculoskeletal symptoms who presented during the German influenza season had the highest risk proportion of positive tests (54%, n = 25/46). Overall, three (4.4%) influenza patients were hospitalised, two (2.9%) received antiviral treatment, and eight (11.8%) received antibiotic therapy., Conclusions: Influenza occurs throughout the year in international travelers and can cause significant morbidity. Travelers with febrile illness should be tested for influenza, especially if they have respiratory or musculoskeletal symptoms, present during the local influenza season, or have travelled to South-East Asia. Influenza vaccination coverage among international travelers needs to be improved among high-risk individuals., (© 2024. The Author(s).)
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- 2024
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39. Understanding pre-hospital disease management of fever and diarrhoea in children-Care pathways in rural Tanzania.
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Lamshöft MM, Liheluka E, Ginski G, Lusingu JPA, Minja D, Gesase S, Mbwana J, Gesase G, Rautman L, Loag W, May J, Dekker D, and Krumkamp R
- Subjects
- Humans, Tanzania epidemiology, Cross-Sectional Studies, Child, Preschool, Female, Male, Infant, Parents, Malaria drug therapy, Adult, Anti-Bacterial Agents therapeutic use, Fever drug therapy, Fever therapy, Diarrhea therapy, Diarrhea drug therapy, Rural Population
- Abstract
Objective: Many children in sub-Saharan Africa die from infectious diseases like malaria, pneumonia, and diarrhoea that can be prevented by early diagnosis, effective and targeted treatment. This study aimed to gain insights into case management practices by parents before they present their children to hospital., Methods: We conducted a cross-sectional study among 332 parents attending a district hospital with their under-fives symptomatic with fever and/or diarrhoea between November 2019 and July 2020 in rural Tanzania. Timely and targeted treatment was defined as seeking health care within 24 h of fever onset, and continued fluid intake in case of diarrhoea., Results: The main admission diagnoses were acute respiratory infections (61.8%), malaria (25.3%), diarrhoea (18.4%) and suspected sepsis (8.1%). The majority of children (91%) received treatment prior to admission, mostly antipyretics (75.6%), local herbal medicines (26.8%), and antibiotics (17.8%)-half of them without prescription from a clinician. For diarrhoea, the use of oral rehydration solution was rare (9.0%), although perceived as easily accessible and affordable. 49.4% of the parents presented their children directly to the hospital, 23.2% went to a pharmacy/drug shop and 19.3% to a primary health facility first. Malaria symptoms began mostly 3 days before the hospital visit; only 25.4% of febrile children visited any health facility within 24 h of disease onset. Prior use of local herbal medicine (AOR = 3.2; 95% CI 1.4-7.3), visiting the pharmacy (adjusted Odds Ratio [AOR] = 3.1; 95% confidence interval [CI]: 1.0-9.8), the dispensary being the nearest health facility (AOR = 3.0; 95% CI: 1.5-6.2), and financial difficulties (AOR = 2.2; 95% CI 1.1-4.5) were associated with delayed treatment., Conclusion: This study suggests that antipyretics and antibiotics dispensed at pharmacies/drug shops, as well as use of local herbal medicines, delay early diagnosis and treatment, which can be life-threatening. Pharmacies/drug shops could be integrated as key focal points for sensitising community members on how to respond to paediatric illnesses and encourage the use of oral rehydration solutions., (© 2024 The Authors Tropical Medicine & International Health published by John Wiley & Sons Ltd.)
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- 2024
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40. Modeling pediatric antibiotic use in an area of declining malaria prevalence.
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Rautman LH, Eibach D, Boateng FO, Akenten CW, Hanson H, Maiga-Ascofaré O, May J, and Krumkamp R
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- Humans, Prevalence, Child, Preschool, Infant, Ghana epidemiology, Female, Male, Fever drug therapy, Fever epidemiology, Child, Malaria drug therapy, Malaria epidemiology, Anti-Bacterial Agents therapeutic use
- Abstract
In malaria-endemic areas of Sub-Saharan Africa, overlap of clinical symptoms between malarial and non-malarial febrile illnesses can lead to empiric use of antibiotics among children. Our study aimed to illustrate the potential impact of decreasing malaria prevalence from malaria control efforts on antibiotic use. We constructed a probabilistic decision tree model representing antibiotic prescription in febrile children < 5 years. This model was used to predict change in absolute antibiotic use compared to baseline under levels of decreasing malaria prevalence. Model parameters were based on data from a hospital study in Ghana and validated via literature review. The baseline prevalence of malaria diagnoses was 52% among all hospitalized children. For our main results, we reported outcomes for a scenario representing a 50% decrease in malaria prevalence. Compared to baseline, absolute antibiotic prescription decreased from a baseline of 639 doses (95% CI 574-694) to 575 (95% CI 502-638). This reflected a 10% (95% CI 7%-13%) decrease in absolute antibiotic use. Our findings demonstrate that effective malaria control can reduce pediatric antibiotic use. However, until substantial progress is made in developing accurate diagnostics for non-malarial febrile illnesses, further reductions in antibiotic use will remain a challenge., (© 2024. The Author(s).)
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- 2024
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41. Fever in focus: Symptoms, diagnoses and treatment of febrile children in Ghana-A longitudinal hospital study.
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Rautman LH, Maiga-Ascofaré O, Eibach D, Hogan B, Dekker D, Jaeger A, Akenten CW, Owusu-Dabo E, Boateng FO, Hanson H, Boahen KG, Sarpong N, Adu-Sarkodie Y, Kreuels B, May J, and Krumkamp R
- Subjects
- Child, Humans, Infant, Ghana epidemiology, Fever diagnosis, Fever etiology, Fever drug therapy, Anti-Bacterial Agents therapeutic use, Hospitals, Antimalarials therapeutic use, Malaria diagnosis, Malaria drug therapy, Malaria epidemiology, Sepsis diagnosis, Sepsis drug therapy, Sepsis epidemiology
- Abstract
Background: Healthcare resources are often limited in areas of sub-Saharan Africa. This makes accurate and timely diagnoses challenging and delays treatment of childhood febrile illness. We explored longitudinal characteristics related to symptoms, diagnosis and treatment of hospitalised febrile children in a rural area of Ghana highly endemic for malaria., Methods: Febrile children under 15 years, admitted to the study hospital paediatric ward, were recruited to the study and clinical data were collected throughout hospitalisation. Descriptive statistics were reported for all cases; for longitudinal analyses, a subset of visits with limited missing data was used., Results: There were 801 hospitalised children included in longitudinal analyses. Malaria (n = 581, 73%) and sepsis (n = 373, 47%) were the most prevalent suspected diagnoses on admission. One-third of malaria suspected diagnoses (n = 192, 33%) were changed on the discharge diagnosis, compared to 84% (n = 315) of sepsis suspected diagnoses. Among malaria-only discharge diagnoses, 98% (n/N = 202/207) received an antimalarial and 33% (n/N = 69/207) an antibiotic; among discharge diagnoses without malaria, 28% (n/N = 108/389) received an antimalarial and 83% (n/N = 324/389) an antibiotic., Conclusions: Suspected diagnoses were largely based on clinical presentation and were frequently changed; changed diagnoses were associated with lingering symptoms, underscoring the need for faster and more accurate diagnostics. Medications were over-prescribed regardless of diagnosis stability, possibly because of a lack of confidence in suspected diagnoses. Thus, better diagnostic tools are needed for childhood febrile illnesses to enhance the accuracy of and confidence in diagnoses, and to cut down unjustified medication use, reducing the risk of antimicrobial and malaria resistance., (© 2023 The Authors Tropical Medicine & International Health Published by John Wiley & Sons Ltd.)
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- 2024
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42. Antibiotic-Resistant Arcobacter spp. in commercial and smallholder farm animals in Asante Akim North Municipality, Ghana and Korogwe Town Council, Tanzania: a cross-sectional study.
- Author
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Paintsil EK, Ofori LA, Akenten CW, Zautner AE, Mbwana J, Khan NA, Lusingu JPA, Kaseka J, Minja DTR, Gesase S, Jaeger A, Lamshöft M, May J, Obiri-Danso K, Krumkamp R, and Dekker D
- Abstract
Background: Arcobacter species are considered emerging foodborne pathogens that can potentially cause serious infections in animals and humans. This cross-sectional study determined the frequency of potentially pathogenic Arcobacter spp. in both commercial and smallholder farm animals in Ghana and Tanzania. A total of 1585 and 1047 (poultry and livestock) samples were collected in Ghana and Tanzania, respectively. Selective enrichment media, along with oxidase and Gram testing, were employed for isolation of suspected Arcobacter spp. and confirmation was done using MALDI-TOF MS. Antibiotic susceptibility was assessed through disk diffusion method and ECOFFs were generated, for interpretation, based on resulting inhibition zone diameters., Results: The overall Arcobacter frequency was higher in Ghana (7.0%, n = 111) than in Tanzania (2.0%, n = 21). The frequency of Arcobacter in commercial farms in Ghana was 10.3% (n/N = 83/805), while in Tanzania, it was 2.8% (n/N = 12/430). Arcobacter was detected in only 3.6% (n/N = 28/780) of the samples from smallholder farms in Ghana and 1.5% (n/N = 9/617) of the samples from Tanzania. For commercial farms, in Ghana, the presence of Arcobacter was more abundant in pigs (45.1%, n/N = 37/82), followed by ducks (38.5%, n/N = 10/26) and quails (35.7%, n/N = 10/28). According to MALDI-TOF-based species identification, Arcobacter butzleri (91.6%, n/N = 121/132), Arcobacter lanthieri (6.1%, n/N = 8/132), and Arcobacter cryaerophilus (2.3%, n/N = 3/132) were the only three Arcobacter species detected at both study sites. Almost all of the Arcobacter from Ghana (98.2%, n/N = 109/111) were isolated during the rainy season. The inhibition zone diameters recorded for penicillin, ampicillin, and chloramphenicol allowed no determination of an epidemiological cut-off value. However, the results indicated a general resistance to these three antimicrobials. Multidrug resistance was noted in 57.1% (n/N = 12/21) of the Arcobacter isolates from Tanzania and 45.0% (n/N = 50/111) of those from Ghana. The type of farm (commercial or smallholder) and source of the sample (poultry or livestock) were found to be associated with multi-drug resistance., Conclusions: The high levels of MDR Arcobacter detected from farms in both countries call for urgent attention and comprehensive strategies to mitigate the spread of antimicrobial resistance in these pathogens., (© 2023. The Author(s).)
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- 2023
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43. Carriage of ESBL-producing Klebsiella pneumoniae and Escherichia coli among children in rural Ghana: a cross-sectional study.
- Author
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Akenten CW, Khan NA, Mbwana J, Krumkamp R, Fosu D, Paintsil EK, Boahen KG, Osei-Mensa J, Maiga-Ascofare O, May J, Obiri-Danso K, Phillips RO, Ofori LA, and Dekker D
- Subjects
- Child, Humans, Cross-Sectional Studies, Ghana epidemiology, beta-Lactamases genetics, Escherichia coli genetics, Klebsiella pneumoniae genetics
- Abstract
Background: Extended-spectrum beta-lactamase (ESBL)-producing Klebsiella pneumoniae (ESBL-KP) and Escherichia coli (ESBL-EC) present a high burden in both communities and healthcare sectors, leading to difficult-to-treat infections. Data on intestinal carriage of ESBL-KP and ESBL-EC in children is scarce, especially in sub-Saharan African countries. We provide data on faecal carriage, phenotypic resistance patterns, and gene variation of ESBL-EC and ESBL-KP among children in the Agogo region of Ghana., Methods: From July to December 2019, fresh stool samples were collected within 24 h from children < 5 years with and without diarrhoea attending the study hospital. The samples were screened for ESBL-EC and ESBL-KP on ESBL agar and confirmed using double-disk synergy testing. Bacterial identification and an antibiotic susceptibility profile were performed using the Vitek 2 compact system (bioMérieux, Inc.). ESBL genes, blaSHV, blaCTX-M, and blaTEM were identified by PCR and further sequencing., Results: Of the 435 children recruited, stool carriage of ESBL-EC and ESBL-KP was 40.9% (n/N = 178/435) with no significant difference in prevalence between children with diarrhoea and non-diarrhoea. No association between ESBL carriage and the age of the children was found. All isolates were resistant to ampicillin and susceptible to meropenem and imipenem. Both ESBL-EC and ESBL-KP isolates showed over 70% resistance to tetracycline and sulfamethoxazole-trimethoprim. Multidrug resistance was observed in over 70% in both ESBL-EC and ESBL-KP isolates. The blaCTX-M-15 was the most prevalent ESBL gene detected. blaCTX-M-27, blaCTX-M-14, and blaCTX-M-14b were found in non-diarrhoea stools of children, whereas blaCTX-M-28 was found in both the diarrhoea and non-diarrhoea patient groups., Conclusions: The carriage of ESBL-EC and ESBL-KP among children with and without diarrhoea in the Agogo community with a high prevalence of blaCTX-M-15 is noteworthy, highlighting the importance of both the population as a possible reservoir. This study reports for the first time the ESBL gene blaCTX-M-28 among the studied populations in Ghana., (© 2023. The Author(s).)
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- 2023
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44. The exception that proves the rule: Virulence gene expression at the onset of Plasmodium falciparum blood stage infections.
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Wichers-Misterek JS, Krumkamp R, Held J, von Thien H, Wittmann I, Höppner YD, Ruge JM, Moser K, Dara A, Strauss J, Esen M, Fendel R, Sulyok Z, Jeninga MD, Kremsner PG, Sim BKL, Hoffman SL, Duffy MF, Otto TD, Gilberger TW, Silva JC, Mordmüller B, Petter M, and Bachmann A
- Subjects
- Animals, Humans, Gene Expression, Plasmodium falciparum genetics, Sporozoites, Virulence genetics, Culicidae genetics, Malaria, Malaria, Falciparum genetics, Malaria, Falciparum parasitology, Parasites genetics
- Abstract
Controlled human malaria infections (CHMI) are a valuable tool to study parasite gene expression in vivo under defined conditions. In previous studies, virulence gene expression was analyzed in samples from volunteers infected with the Plasmodium falciparum (Pf) NF54 isolate, which is of African origin. Here, we provide an in-depth investigation of parasite virulence gene expression in malaria-naïve European volunteers undergoing CHMI with the genetically distinct Pf 7G8 clone, originating in Brazil. Differential expression of var genes, encoding major virulence factors of Pf, PfEMP1s, was assessed in ex vivo parasite samples as well as in parasites from the in vitro cell bank culture that was used to generate the sporozoites (SPZ) for CHMI (Sanaria PfSPZ Challenge (7G8)). We report broad activation of mainly B-type subtelomeric located var genes at the onset of a 7G8 blood stage infection in naïve volunteers, mirroring the NF54 expression study and suggesting that the expression of virulence-associated genes is generally reset during transmission from the mosquito to the human host. However, in 7G8 parasites, we additionally detected a continuously expressed single C-type variant, Pf7G8_040025600, that was most highly expressed in both pre-mosquito cell bank and volunteer samples, suggesting that 7G8, unlike NF54, maintains expression of some previously expressed var variants during transmission. This suggests that in a new host, the parasite may preferentially express the variants that previously allowed successful infection and transmission. Trial registration: ClinicalTrials.gov - NCT02704533; 2018-004523-36., Competing Interests: The authors declare that they have no conflicts of interest., (Copyright: © 2023 Wichers-Misterek et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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45. Symptoms of illness during travel and risk factors for non-adherence to malaria prophylaxis-a cross-sectional study in travellers from Germany.
- Author
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Reinsberg F, Moehlmann MW, Krumkamp R, Landsmann L, Heitkamp C, Jochum J, Addo M, Ramharter M, Radt C, Rothe C, Vinnemeier C, and Kreuels B
- Subjects
- Humans, Adult, Proguanil therapeutic use, Atovaquone adverse effects, Travel, Cross-Sectional Studies, Travel-Related Illness, Risk Factors, Prescriptions, Germany, Antimalarials adverse effects, Malaria drug therapy, Drug-Related Side Effects and Adverse Reactions drug therapy
- Abstract
Background: Perceived adverse effects of antimalarial chemoprophylaxis can be difficult to distinguish from travel-related illness and are often cited as important reasons for non-adherence or refusal of antimalarial chemoprophylaxis. We aimed to investigate the occurrence of symptoms of illness in travellers with and without chemoprophylaxis in a cross-sectional study after travel and to identify risk factors for non-adherence to prophylaxis., Methods: We enrolled 458 travellers to Africa and South America during their pre-travel medical consultation at the travel clinic of the University Medical Centre Hamburg-Eppendorf and conducted post-travel interviews on symptoms of illness and intake of malaria prophylaxis., Results: Eleven percent (49/437) of the participants reported symptoms of illness during travel. In total, 36% (160/448) of the participants reported prescription of chemoprophylaxis, the vast majority of these travelled to Africa (98%) and received atovaquone/proguanil (93%). Frequency of symptoms did not differ significantly between participants without prophylaxis and those taking atovaquone/proguanil. Non-adherence to prophylaxis was frequent (20%), but only 3% (4/149) of the participants stopped the medication early because of perceived side effects. Risk factors associated with non-adherence to prophylaxis included age under 30 years, travel to West or Central Africa and travel duration greater than 14 days., Conclusions: Symptoms of illness during travel occurred at similar frequencies irrespective of intake of chemoprophylaxis. Travellers should be informed about chemoprophylaxis in a balanced way, without raising fear of side effects, especially among groups at higher risk for incorrect use of prophylaxis., (© International Society of Travel Medicine 2023. Published by Oxford University Press.)
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- 2023
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46. Spatiotemporal variation in risk of Shigella infection in childhood: a global risk mapping and prediction model using individual participant data.
- Author
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Badr HS, Colston JM, Nguyen NH, Chen YT, Burnett E, Ali SA, Rayamajhi A, Satter SM, Van Trang N, Eibach D, Krumkamp R, May J, Adegnika AA, Manouana GP, Kremsner PG, Chilengi R, Hatyoka L, Debes AK, Ateudjieu J, Faruque ASG, Hossain MJ, Kanungo S, Kotloff KL, Mandomando I, Nisar MI, Omore R, Sow SO, Zaidi AKM, Lambrecht N, Adu B, Page N, Platts-Mills JA, Mavacala Freitas C, Pelkonen T, Ashorn P, Maleta K, Ahmed T, Bessong P, Bhutta ZA, Mason C, Mduma E, Olortegui MP, Peñataro Yori P, Lima AAM, Kang G, Humphrey J, Ntozini R, Prendergast AJ, Okada K, Wongboot W, Langeland N, Moyo SJ, Gaensbauer J, Melgar M, Freeman M, Chard AN, Thongpaseuth V, Houpt E, Zaitchik BF, and Kosek MN
- Subjects
- Child, Humans, Diarrhea epidemiology, Diarrhea etiology, Africa South of the Sahara, Temperature, Family Characteristics, Global Health, Dysentery, Bacillary epidemiology
- Abstract
Background: Diarrhoeal disease is a leading cause of childhood illness and death globally, and Shigella is a major aetiological contributor for which a vaccine might soon be available. The primary objective of this study was to model the spatiotemporal variation in paediatric Shigella infection and map its predicted prevalence across low-income and middle-income countries (LMICs)., Methods: Individual participant data for Shigella positivity in stool samples were sourced from multiple LMIC-based studies of children aged 59 months or younger. Covariates included household-level and participant-level factors ascertained by study investigators and environmental and hydrometeorological variables extracted from various data products at georeferenced child locations. Multivariate models were fitted and prevalence predictions obtained by syndrome and age stratum., Findings: 20 studies from 23 countries (including locations in Central America and South America, sub-Saharan Africa, and south and southeast Asia) contributed 66 563 sample results. Age, symptom status, and study design contributed most to model performance followed by temperature, wind speed, relative humidity, and soil moisture. Probability of Shigella infection exceeded 20% when both precipitation and soil moisture were above average and had a 43% peak in uncomplicated diarrhoea cases at 33°C temperatures, above which it decreased. Compared with unimproved sanitation, improved sanitation decreased the odds of Shigella infection by 19% (odds ratio [OR]=0·81 [95% CI 0·76-0·86]) and open defecation decreased them by 18% (OR=0·82 [0·76-0·88])., Interpretation: The distribution of Shigella is more sensitive to climatological factors, such as temperature, than previously recognised. Conditions in much of sub-Saharan Africa are particularly propitious for Shigella transmission, although hotspots also occur in South America and Central America, the Ganges-Brahmaputra Delta, and the island of New Guinea. These findings can inform prioritisation of populations for future vaccine trials and campaigns., Funding: NASA, National Institutes of Health-The National Institute of Allergy and Infectious Diseases, and Bill & Melinda Gates Foundation., Competing Interests: Declaration of interests JG and MM report grants from PanTheryx, during the conduct of the study; NP reports grants from GlaxoSmithKline, during the conduct of the study; the remaining authors declare no competing interests., (Copyright © 2023 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2023
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47. Pathogens associated with hospitalization due to acute lower respiratory tract infections in children in rural Ghana: a case-control study.
- Author
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Krumkamp R, Kohsar M, Nolte K, Hogan B, Eibach D, Jaeger A, Akenten CW, Drosten C, Boahen KG, Sarpong N, Eckerle I, Binger T, Owusu-Dabo E, May J, and Kreuels B
- Subjects
- Humans, Child, Infant, Child, Preschool, Ghana epidemiology, Case-Control Studies, SARS-CoV-2, Streptococcus pneumoniae, Haemophilus influenzae, Hospitalization, Influenza, Human epidemiology, COVID-19, Respiratory Tract Infections epidemiology, Respiratory Syncytial Virus, Human, Respiratory Syncytial Virus Infections epidemiology
- Abstract
Respiratory infections are one of the most common causes of death among children under the age of five years. Data on prevalence and relevance of specific organisms in African children are still lacking. This case-control-study investigated prevalence and relevance of specific organisms in Ghanaian children admitted to hospital with symptoms of lower respiratory tract infection (LRTI). Pharyngeal swabs were taken and tested by PCR for 19 respiratory isolates. Adjusted odds ratios (aORs) were calculated to estimate associations between isolates and admission with LRTI. Population attributable fractions (PAFs) were calculated to assess the proportion of LRTI cases due to a particular pathogen. The study included 327 cases and 562 controls. We found associations between detection and admission for LRTI for influenza (aOR 98.6; 95% confidence interval (CI) 20.0-1789.6), respiratory syncytial virus (aOR 40.2; 95% CI 7.2-758.6), H. influenzae (aOR 4.1; 95% CI 2.2-7.9) and S. pneumoniae (aOR 2.4; 95% CI 1.7-3.4). PAFs ≥ 10% were observed for S. pneumoniae (30%; 95% CI 26-42), H. influenzae (10%; 95% CI 2-19) and influenza (10%; 95% CI 2-18). This study highlights the need for heightened surveillance and development of effective vaccines for respiratory pathogens other than SARS-CoV-2 in the future., (© 2023. The Author(s).)
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- 2023
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48. Prevalence, Characterization, and Antimicrobial Resistance of Extended-Spectrum Beta-Lactamase-Producing Escherichia coli from Domestic Free-Range Poultry in Agogo, Ghana.
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Akenten CW, Ofori LA, Khan NA, Mbwana J, Sarpong N, May J, Thye T, Obiri-Danso K, Paintsil EK, Fosu D, Philipps RO, Eibach D, Krumkamp R, and Dekker D
- Subjects
- Animals, Anti-Bacterial Agents pharmacology, beta-Lactamases genetics, Chickens microbiology, Drug Resistance, Bacterial genetics, Ghana epidemiology, Poultry microbiology, Prevalence, Escherichia coli, Escherichia coli Infections epidemiology, Escherichia coli Infections veterinary, Escherichia coli Infections microbiology
- Abstract
Poultry has been suggested as an important source for extended-spectrum beta-lactamase (ESBL)-producing bacteria that can lead to difficult-to treat infections in humans. Therefore, this study aims to determine the frequency, the genetics, and antimicrobial resistance profiles of ESBL-producing Escherichia coli in domestic free-range poultry in Agogo, Ghana. The study was set up and piloted from January 2019 until June 2019. Between June and December 2019, fecal samples ( N = 144) were collected from free-roaming chickens from domestic farms in the regions of Sukuumu, Bontodiase, and Freetown and cultured on ESBL screening agar. Strain identification and antibiotic susceptibility were performed using the VITEK 2 compact system. ESBL-producing E. coli were confirmed using the double disk synergy test. Molecular characterization of ESBL-associated genes ( bla
TEM , blaSHV , and blaCTX-M ) were performed using conventional polymerase chain reaction (PCR) and further sequencing of obtained PCR amplicons. The result showed that 56.2% ( n / N = 81/144) of collected fecal samples were positive for ESBL-producing E. coli . Majority of the isolates showed resistance to tetracycline (93.8%, n / N = 76/81) and trimethoprim-sulfamethoxazole (66.7, n / N = 54/81), whereas resistance to carbapenems was not found. The majority of ESBL-producing E. coli carried the blaCTX-M genes, with blaCTX-M-15 being the dominant (95.1%, n / N = 77/81) genotype. In this study, we report high frequencies of ESBL-producing E. coli in smallholder free-range poultry representing a potential source of infection, highlighting the need for control of antibiotic use and animal hygiene/sanitation measures, both important from a One Health perspective.- Published
- 2023
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49. Experience of using expired lyophilized snake antivenom during a medical emergency situation in Lao People's Democratic Republic--A possible untapped resource to tackle antivenom shortage in Southeast Asia.
- Author
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Blessmann J, Hanlodsomphou S, Santisouk B, Krumkamp R, Kreuels B, Ismail AK, Yong MY, Tan KY, and Tan CH
- Subjects
- Humans, Laos, Antivenins therapeutic use, Snake Bites drug therapy
- Abstract
Objectives: To evaluate the safety and efficacy of expired lyophilized snake antivenom of Thai origin during a medical emergency in 2020/2021 in Lao People's Democratic Republic., Methods: Observational case series of patients with potentially life-threatening envenoming who consented to the administration of expired antivenom between August 2020 and May 2022., Results: A total of 31 patients received the expired antivenom. Malayan pit vipers (Calloselasma rhodostoma) were responsible for 26 (84%) cases and green pit vipers (Trimeresurus species) for two cases (6%). In three patients (10%) the responsible snake could not be identified. Of these, two presented with signs of neurotoxicity and one with coagulopathy. A total of 124 vials of expired antivenom were administered. Fifty-nine vials had expired 2-18 months earlier, 56 vials 19-36 months and nine vials 37-60 months before. Adverse effects of variable severity were observed in seven (23%) patients. All 31 patients fully recovered from systemic envenoming., Conclusions: Under closely controlled conditions and monitoring the use of expired snake antivenom proved to be effective and safe. Discarding this precious medication is an unnecessary waste, and it could be a valuable resource in ameliorating the current shortage of antivenom. Emergency use authorization granted by health authorities and preclinical testing of expired antivenoms could provide the support and legal basis for such an approach., (© 2022 The Authors Tropical Medicine & International Health Published by John Wiley & Sons Ltd.)
- Published
- 2023
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50. Antibiotic-resistant Campylobacter coli and Campylobacter jejuni in commercial and smallholder farm animals in the Asante Akim North Municipality of Ghana.
- Author
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Paintsil EK, Ofori LA, Akenten CW, Zautner AE, Mbwana J, Jaeger A, Lamshöft M, May J, Obiri-Danso K, Philipps RO, Krumkamp R, and Dekker D
- Abstract
Worldwide, farm animals, in particular poultry, are an important reservoir for Campylobacter spp. However, information on Campylobacter colonization in farm animals in Africa is scarce. Hence, this cross-sectional study determined antibiotic-resistant Campylobacter from both commercial and smallholder farm animals in the Asante Akim North Municipality of Ghana. Fecal samples from poultry and livestock kept by commercial and smallholder farms were collected and analyzed using standard microbiological methods. The overall Campylobacter frequency was 20.3% ( n / N = 322/1,585), and frequencies detected were similarly high in isolates from commercial (21.0%, n / N = 169/805) and smallholder (19.6%, n / N = 153/780) farms. Species isolated were C . coli (67.7%, n / N = 218/322) and C . jejuni (32.3%, n / N = 104/322). However, the frequency of C . coli was 2.1 (95% CI: 1.8-2.5) times higher than what was found for C . jejuni . Campylobacter frequencies in the rainy season was 22.2% ( n / N = 258/1,160) and 15.1% ( n / N = 64/425) in the dry season (prevalence ratio = 1.48, 95% CI: 1.2-1.9). About 1.7% ( n / N = 6/322) of the Campylobacter isolates, all from smallholder farms, were susceptible to all antibiotics tested. Multidrug resistance was observed for 4.7% ( n / N = 15/322) of the Campylobacter isolates, of which 93.3% ( n / N = 14/15) occurred in isolates from commercial farms. This study highlights the need for the implementation of control programs, in commercial farming but also at the smallholder farm level, to formulate clear guidelines aimed at decreasing Campylobacter contamination of meat products and reducing the use of antibiotics in the farming sector., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Paintsil, Ofori, Akenten, Zautner, Mbwana, Jaeger, Lamshöft, May, Obiri-Danso, Philipps, Krumkamp and Dekker.)
- Published
- 2022
- Full Text
- View/download PDF
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