322 results on '"Kozikowski AP"'
Search Results
2. Active Benzimidazole Derivatives Targeting the MmpL3 Transporter in Mycobacterium abscessus
- Author
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Raynaud C, Daher W, Johansen MD, Roquet-Banères F, Blaise M, Onajole OK, Kozikowski AP, Herrmann J-L, Dziadek J, Gobis K, and Kremer L
- Subjects
1108 Medical Microbiology ,bacterial infections and mycoses - Abstract
The prevalence of pulmonary infections due to nontuberculous mycobacteria such as Mycobacterium abscessus has been increasing and surpassing tuberculosis (TB) in some industrialized countries. Because of intrinsic resistance to most antibiotics that drastically limits conventional chemotherapeutic treatment options, new anti-M. abscessus therapeutics are urgently needed against this emerging pathogen. Extensive screening of a library of benzimidazole derivatives that were previously shown to be active against Mycobacterium tuberculosis led to the identification of a lead compound exhibiting very potent in vitro activity against a wide panel of M. abscessus clinical strains. Designated EJMCh-6, this compound, a 2-(2-cyclohexylethyl)-5,6-dimethyl-1H-benzo[d]imidazole), also exerted very strong activity against intramacrophage-residing M. abscessus. Moreover, the treatment of infected zebrafish embryos with EJMCh-6 was correlated with significantly increased embryo survival and a decrease in the bacterial burden as compared to those for untreated fish. Insights into the mechanism of action were inferred from the generation of spontaneous benzimidazole-resistant strains and the identification of a large set of missense mutations in MmpL3, the mycolic acid transporter in mycobacteria. Overexpression of the mutated mmpL3 alleles in a susceptible M. abscessus strain was associated with high resistance levels to EJMCh-6 and to other known MmpL3 inhibitors. Mapping the mutations conferring resistance on an MmpL3 three-dimensional homology model defined a potential EJMCh-6-binding cavity. These data emphasize a yet unexploited chemical structure class against M. abscessus with promising translational development for the treatment of M. abscessus lung diseases.
- Published
- 2020
3. AN APPROACH TO OPEN-CHAIN AND MODIFIED HETEROCYCLIC-ANALOGS OF THE ACETYLCHOLINESTERASE INHIBITOR, HUPERZINE-A, THROUGH A BICYCLO[3.3.1]NONANE INTERMEDIATE
- Author
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Kozikowski, Ap, Campiani, Giuseppe, and Tuckmantel, W.
- Published
- 1994
4. Differential Effects of HDAC6 Inhibition Versus Knockout During Hepatic Ischemia-Reperfusion Injury Highlight Importance of HDAC6 C-terminal Zinc-finger Ubiquitin-binding Domain.
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Concors SJ, Hernandez PT, O'Brien C, DePaolo J, Murken DR, Aufhauser DD, Wang Z, Xiong Y, Krumeich L, Ge G, Beier UH, Bhatti TR, Kozikowski AP, Avelar LAA, Kurz T, Hancock WW, and Levine MH
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- Animals, Male, Disease Models, Animal, Mice, Aspartate Aminotransferases blood, Alanine Transaminase blood, Indoles pharmacology, Indoles therapeutic use, Histone Deacetylases metabolism, Histone Deacetylases genetics, Warm Ischemia adverse effects, Ubiquitin metabolism, Reperfusion Injury prevention & control, Reperfusion Injury metabolism, Reperfusion Injury etiology, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase 6 metabolism, Histone Deacetylase 6 genetics, Histone Deacetylase Inhibitors pharmacology, Liver drug effects, Liver pathology, Liver blood supply, Liver metabolism, Mice, Inbred C57BL, Mice, Knockout, Hydroxamic Acids pharmacology, Liver Transplantation adverse effects
- Abstract
Background: Ischemia-reperfusion injury (IRI) causes significant morbidity in liver transplantation among other medical conditions. IRI following liver transplantation contributes to poor outcomes and early graft loss. Histone/protein deacetylases (HDACs) regulate diverse cellular processes, play a role in mediating tissue responses to IRI, and may represent a novel therapeutic target in preventing IRI in liver transplantation., Methods: Using a previously described standardized model of murine liver warm IRI, aspartate aminotransferase (AST) and alanine aminotransferase (ALT) levels were assessed at 24 and 48 h after reperfusion to determine the effect of different HDAC inhibitors., Results: Broad HDAC inhibition with trichostatin-A (TSA) was protective against hepatocellular damage ( P < 0.01 for AST and P < 0.05 for ALT). Although HDAC class I inhibition with MS-275 provided statistically insignificant benefit, tubastatin-A (TubA), an HDAC6 inhibitor with additional activity against HDAC10, provided significant protection against liver IRI ( P < 0.01 for AST and P < 0.001 for ALT). Surprisingly genetic deletion of HDAC6 or -10 did not replicate the protective effects of HDAC6 inhibition with TubA, whereas treatment with an HDAC6 BUZ-domain inhibitor, LakZnFD, eliminated the protective effect of TubA treatment in liver ischemia ( P < 0.01 for AST and P < 0.01 for ALT)., Conclusions: Our findings suggest TubA, a class IIb HDAC inhibitor, can mitigate hepatic IRI in a manner distinct from previously described class I HDAC inhibition and requires the HDAC6 BUZ-domain activity. Our data corroborate previous findings that HDAC targets for therapeutic intervention of IRI may be tissue-specific, and identify HDAC6 inhibition as a possible target in the treatment of liver IRI., Competing Interests: The authors declare no conflicts of interest., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
- Published
- 2024
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5. Correction: Glycogen Synthase Kinase-3 Inhibition Sensitizes Pancreatic Cancer Cells to Chemotherapy by Abrogating the TopBP1/ATR-mediated DNA Damage Response.
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Ding L, Madamsetty VS, Kiers S, Alekhina O, Ugolkov A, Dube J, Zhang Y, Zhang JS, Wang E, Dutta SK, Schmitt DM, Giles FJ, Kozikowski AP, Mazar AP, Mukhopadhyay D, and Billadeau DD
- Published
- 2021
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6. Tetrahydroquinoline-Capped Histone Deacetylase 6 Inhibitor SW-101 Ameliorates Pathological Phenotypes in a Charcot-Marie-Tooth Type 2A Mouse Model.
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Shen S, Picci C, Ustinova K, Benoy V, Kutil Z, Zhang G, Tavares MT, Pavlíček J, Zimprich CA, Robers MB, Van Den Bosch L, Bařinka C, Langley B, and Kozikowski AP
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- Acetylation, Animals, Benzamides chemistry, Benzamides metabolism, Binding Sites, Charcot-Marie-Tooth Disease metabolism, Charcot-Marie-Tooth Disease pathology, Crystallography, X-Ray, Disease Models, Animal, Half-Life, Histone Deacetylase 6 metabolism, Histone Deacetylase Inhibitors chemistry, Histone Deacetylase Inhibitors metabolism, Humans, Male, Mice, Mice, Inbred C57BL, Molecular Docking Simulation, Phenotype, Protein Isoforms antagonists & inhibitors, Protein Isoforms metabolism, Quinolines metabolism, Quinolines therapeutic use, Structure-Activity Relationship, Tubulin metabolism, Charcot-Marie-Tooth Disease drug therapy, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors therapeutic use, Quinolines chemistry
- Abstract
Histone deacetylase 6 (HDAC6) is a promising therapeutic target for the treatment of neurodegenerative disorders. SW-100 ( 1a ), a phenylhydroxamate-based HDAC6 inhibitor (HDAC6i) bearing a tetrahydroquinoline (THQ) capping group, is a highly potent and selective HDAC6i that was shown to be effective in mouse models of Fragile X syndrome and Charcot-Marie-Tooth disease type 2A (CMT2A). In this study, we report the discovery of a new THQ-capped HDAC6i, termed SW-101 ( 1s ), that possesses excellent HDAC6 potency and selectivity, together with markedly improved metabolic stability and druglike properties compared to SW-100 ( 1a ). X-ray crystallography data reveal the molecular basis of HDAC6 inhibition by SW-101 ( 1s ). Importantly, we demonstrate that SW-101 ( 1s ) treatment elevates the impaired level of acetylated α-tubulin in the distal sciatic nerve, counteracts progressive motor dysfunction, and ameliorates neuropathic symptoms in a CMT2A mouse model bearing mutant MFN 2. Taken together, these results bode well for the further development of SW-101 ( 1s ) as a disease-modifying HDAC6i.
- Published
- 2021
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7. Mercaptoacetamide: A promising zinc-binding group for the discovery of selective histone deacetylase 6 inhibitors.
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Tavares MT, Kozikowski AP, and Shen S
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- Acetamides chemistry, Acetamides pharmacokinetics, Acetamides pharmacology, Animals, Drug Discovery, Histone Deacetylase 6 metabolism, Histone Deacetylase Inhibitors pharmacokinetics, Humans, Isoenzymes antagonists & inhibitors, Isoenzymes metabolism, Models, Molecular, Sulfhydryl Compounds pharmacokinetics, Zinc metabolism, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors chemistry, Histone Deacetylase Inhibitors pharmacology, Sulfhydryl Compounds chemistry, Sulfhydryl Compounds pharmacology
- Abstract
Histone deacetylase 6 (HDAC6) is a zinc-dependent HDAC that mainly modulates the acetylation status of non-histone substrates, such as α-tubulin and heat shock protein 90 (HSP90). The activity of HDAC6 plays a critical role in cell proliferation, protein trafficking and degradation, cell shape, migration, as well as regulation of immunomodulatory factors. For this reason, HDAC6 influences the progress of cancers, neurodegenerative disorders, and autoimmune responses. In the last few years, the discovery of selective HDAC6 inhibitors (HDAC6is) has become an attractive research area as five HDAC6is are being investigated in phase I/II clinical trials. However, the hydroxamic acid functional group still represents the predominant zinc-binding group (ZBG), that often suffers from poor pharmacokinetics and mutagenic potential, thus impairing the application of hydroxamate-based HDAC6is for long-term therapies. On the other hand, mercaptoacetamide (MCA)-based HDAC6is comprise a class of compounds that, in some cases, display nanomolar HDAC6 potency and a thousand-fold selectivity over class I HDAC isozymes. Moreover, MCA-based HDAC6is lack the mutagenicity associated with the hydroxamate function and display pharmacological effects, demonstrating the potential of this particular ZBG to improve upon the drug-like properties of HDAC6is. Herein, we summarize for the first time the structure-activity relationships (SARs) of MCA-based HDAC6is, discuss their HDAC6 selectivity at the molecular level using inhibitor-HDAC co-crystal structures, and further provide our perspective regarding their drug metabolism, pharmacokinetics, and pharmacological properties., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Masson SAS. All rights reserved.)
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- 2021
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8. Rational Design of Suprastat: A Novel Selective Histone Deacetylase 6 Inhibitor with the Ability to Potentiate Immunotherapy in Melanoma Models.
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Noonepalle S, Shen S, Ptáček J, Tavares MT, Zhang G, Stránský J, Pavlíček J, Ferreira GM, Hadley M, Pelaez G, Bařinka C, Kozikowski AP, and Villagra A
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- Animals, Cell Line, Tumor, Crystallography, X-Ray, Drug Design, Female, Histone Deacetylase 6 metabolism, Histone Deacetylase Inhibitors chemical synthesis, Histone Deacetylase Inhibitors metabolism, Humans, Hydrogen Bonding, Hydroxamic Acids chemical synthesis, Hydroxamic Acids metabolism, Immunologic Factors chemical synthesis, Immunologic Factors metabolism, Immunotherapy, Melanoma therapy, Mice, Inbred C57BL, Microsomes, Liver metabolism, Molecular Dynamics Simulation, Phenylurea Compounds chemical synthesis, Phenylurea Compounds metabolism, Protein Binding, Rats, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors therapeutic use, Hydroxamic Acids therapeutic use, Immunologic Factors therapeutic use, Melanoma drug therapy, Phenylurea Compounds therapeutic use
- Abstract
Selective inhibition of histone deacetylase 6 (HDAC6) is being recognized as a therapeutic approach for cancers. In this study, we designed a new HDAC6 inhibitor, named Suprastat, using in silico simulations. X-ray crystallography and molecular dynamics simulations provide strong evidence to support the notion that the aminomethyl and hydroxyl groups in the capping group of Suprastat establish significant hydrogen bond interactions, either direct or water-mediated, with residues D460, N530, and S531, which play a vital role in regulating the deacetylase function of the enzyme and which are absent in other isoforms. In vitro characterization of Suprastat demonstrates subnanomolar HDAC6 inhibitory potency and a hundred- to a thousand-fold HDAC6 selectivity over the other HDAC isoforms. In vivo studies reveal that a combination of Suprastat and anti-PD1 immunotherapy enhances antitumor immune response, mediated by a decrease of protumoral M2 macrophages and increased infiltration of antitumor CD8+ effector and memory T-cells.
- Published
- 2020
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9. HDAC6 inhibition promotes α-tubulin acetylation and ameliorates CMT2A peripheral neuropathy in mice.
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Picci C, Wong VSC, Costa CJ, McKinnon MC, Goldberg DC, Swift M, Alam NM, Prusky GT, Shen S, Kozikowski AP, Willis DE, and Langley B
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- Acetylation drug effects, Animals, Charcot-Marie-Tooth Disease metabolism, Mice, Mice, Mutant Strains, Motor Activity drug effects, Benzamides pharmacology, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors pharmacology, Quinolines pharmacology, Tubulin metabolism
- Abstract
Charcot-Marie-Tooth type 2A (CMT2A) peripheral neuropathy, the most common axonal form of CMT, is caused by dominantly inherited point mutations in the Mitofusin 2 (Mfn2) gene. It is characterized by progressive length-dependent degeneration of motor and sensory nerves with corresponding clinical features of motor and sensory impairment. There is no cure for CMT, and therapeutic approaches are limited to physical therapy, orthopedic devices, surgery, and analgesics. In this study we focus on histone deacetylase 6 (HDAC6) as a therapeutic target in a mouse model of mutant MFN2 (MFN2
R94Q )-induced CMT2A. We report that these mice display progressive motor and sensory dysfunction as well as a significant decrease in α-tubulin acetylation in distal segments of long peripheral nerves. Treatment with a new, highly selective HDAC6 inhibitor, SW-100, was able to restore α-tubulin acetylation and ameliorate motor and sensory dysfunction when given either prior to or after the onset of symptoms. To confirm HDAC6 is the target for ameliorating the CMT2A phenotype, we show that genetic deletion of Hdac6 in CMT2A mice prevents the development of motor and sensory dysfunction. Our findings suggest α-tubulin acetylation defects in distal parts of nerves as a pathogenic mechanism and HDAC6 as a therapeutic target for CMT2A., (Copyright © 2020 Elsevier Inc. All rights reserved.)- Published
- 2020
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10. Design and Synthesis of Bitopic 2-Phenylcyclopropylmethylamine (PCPMA) Derivatives as Selective Dopamine D3 Receptor Ligands.
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Tan L, Zhou Q, Yan W, Sun J, Kozikowski AP, Zhao S, Huang XP, and Cheng J
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- Animals, Binding Sites, Brain metabolism, Cyclopropanes chemical synthesis, Cyclopropanes metabolism, Dopamine Agonists chemical synthesis, Dopamine Agonists metabolism, Dopamine Antagonists chemical synthesis, Dopamine Antagonists metabolism, Drug Design, Ligands, Methylamines chemical synthesis, Methylamines metabolism, Mice, Inbred ICR, Molecular Docking Simulation, Molecular Structure, Receptor, Serotonin, 5-HT2C metabolism, Stereoisomerism, Structure-Activity Relationship, Cyclopropanes pharmacokinetics, Dopamine Agonists pharmacokinetics, Dopamine Antagonists pharmacokinetics, Methylamines pharmacokinetics, Receptors, Dopamine D3 metabolism
- Abstract
2-Phenylcyclopropylmethylamine (PCPMA) analogues have been reported as selective serotonin 2C agonists. On the basis of the same scaffold, we designed and synthesized a series of bitopic derivatives as dopamine D3R ligands. A number of these new compounds show a high binding affinity for D3R with excellent selectivity. Compound (1 R ,2 R )- 22e and its enantiomer (1 S ,2 S )- 22e show a comparable binding affinity for the D3R, but the former is a potent D3R agonist, while the latter acts as an antagonist. Molecular docking studies revealed different binding poses of the PCPMA moiety within the orthosteric binding pocket of the D3R, which might explain the different functional profiles of the enantiomers. Compound (1 R ,2 R )- 30q shows a high binding affinity for the D3R ( K
i = 2.2 nM) along with good selectivity, as well as good bioavailability and brain penetration properties in mice. These results reveal that the PCPMA scaffold may serve as a privileged scaffold for the design of aminergic GPCR ligands.- Published
- 2020
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11. The preclinical candidate indole-2-carboxamide improves immune responses to Mycobacterium tuberculosis infection in healthy subjects and individuals with type 2 diabetes.
- Author
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Cao R, Islamoglu H, Teskey G, Gyurjian K, Abrahem R, Onajole OK, Lun S, Bishai W, Kozikowski AP, Fraix MP, Sathananthan A, Zhong L, Stec J, and Venketaraman V
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- Antitubercular Agents pharmacology, Cytokines drug effects, Cytokines metabolism, Diabetes Mellitus, Type 2 immunology, Drug Discovery, Granuloma drug therapy, Granuloma metabolism, Granuloma microbiology, Healthy Volunteers, Humans, Immunity, Cellular drug effects, THP-1 Cells, Tuberculosis drug therapy, Immunity, Innate drug effects, Indoles pharmacology, Mycobacterium tuberculosis drug effects
- Abstract
A novel group of agents known as the indole-2-carboxamides (often referred to as indoleamides) have been shown to demonstrate high antimycobacterial activity. Studies have demonstrated that the best indoleamides possess desirable ADME/Tox properties, with less adverse effects and increased efficacy against both MDR-TB (multi-drug resistant TB) and XDR-TB (extensively drug-resistant TB). The primary mechanism of killing Mycobacterium tuberculosis (Mtb) by indoleamides is by disrupting the function of the essential mycolic acid transporter MmpL3 protein (Mycobacterial membrane protein Large 3). Therefore, targeting this essential mycobacterial transporter by small molecules opens new possibility for the development of novel and effective anti-TB agents. In the present study, we characterized the effects of indoleamides in altering the viability of Mtb in an in vitro granuloma model using immune cells derived from healthy subjects and those with type 2 diabetes mellitus (T2DM). Our results indicate that treatment with the best indoleamide 3 resulted in a significant reduction in the viability of Mtb in both THP-1 macrophages as well as in granulomas derived from healthy individuals and subjects with T2DM. Graphical Abstract.
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- 2020
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12. A patent review of histone deacetylase 6 inhibitors in neurodegenerative diseases (2014-2019).
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Shen S and Kozikowski AP
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- Animals, Drug Development, Humans, Neurodegenerative Diseases enzymology, Patents as Topic, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors pharmacology, Neurodegenerative Diseases drug therapy
- Abstract
Introduction : Histone deacetylase 6 (HDAC6) is unique in comparison with other zinc-dependent HDAC family members. An increasing amount of evidence from clinical and preclinical research demonstrates the potential of HDAC6 inhibition as an effective therapeutic approach for the treatment of cancer, autoimmune diseases, as well as neurological disorders. The recently disclosed crystal structures of HDAC6-ligand complexes offer further means for achieving pharmacophore refinement, thus further accelerating the pace of HDAC6 inhibitor discovery in the last few years. Area covered : This review summarizes the latest clinical status of HDAC6 inhibitors, discusses pharmacological applications of selective HDAC6 inhibitors in neurodegenerative diseases, and describes the patent applications dealing with HDAC6 inhibitors from 2014-2019 that have not been reported in research articles. Expert opinion : Phenylhydroxamate has proven a very useful scaffold in the discovery of potent and selective HDAC6 inhibitors. However, weaknesses of the hydroxamate function such as metabolic instability and mutagenic potential limit its application in the neurological field, where long-term administration is required. The recent invention of oxadiazole-based ligands by pharmaceutical companies may provide a new opportunity to optimize the druglike properties of HDAC6 inhibitors for the treatment of neurodegenerative diseases.
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- 2020
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13. Structural and in Vivo Characterization of Tubastatin A, a Widely Used Histone Deacetylase 6 Inhibitor.
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Shen S, Svoboda M, Zhang G, Cavasin MA, Motlova L, McKinsey TA, Eubanks JH, Bařinka C, and Kozikowski AP
- Abstract
Tubastatin A, a tetrahydro-γ-carboline-capped selective HDAC6 inhibitor (HDAC6i), was rationally designed 10 years ago, and has become the best investigated HDAC6i to date. It shows efficacy in various neurological disease animal models, as HDAC6 plays a crucial regulatory role in axonal transport deficits, protein aggregation, as well as oxidative stress. In this work, we provide new insights into this HDAC6i by investigating the molecular basis of its interactions with HDAC6 through X-ray crystallography, determining its functional capability to elevate the levels of acetylated α-tubulin in vitro and in vivo, correlating PK/PD profiles to determine effective doses in plasma and brain, and finally assessing its therapeutic potential toward psychiatric diseases through use of the SmartCube screening platform., Competing Interests: The authors declare no competing financial interest., (Copyright © 2020 American Chemical Society.)
- Published
- 2020
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14. Design of fluorinated cyclopropane derivatives of 2-phenylcyclopropylmethylamine leading to identification of a selective serotonin 2C (5-HT 2C ) receptor agonist without 5-HT 2B agonism.
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Zhang G, McCorvy JD, Shen S, Cheng J, Roth BL, and Kozikowski AP
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- Cyclopropanes chemical synthesis, Cyclopropanes chemistry, Dose-Response Relationship, Drug, Halogenation, Humans, Methylamines chemical synthesis, Methylamines chemistry, Molecular Docking Simulation, Molecular Structure, Receptor, Serotonin, 5-HT2B metabolism, Structure-Activity Relationship, Cyclopropanes pharmacology, Drug Design, Methylamines pharmacology, Receptor, Serotonin, 5-HT2C metabolism
- Abstract
A new series of fluorinated 5-HT
2C agonists were designed and synthesized on the basis of our previous work on 2-phenylcyclopropylmethylamines as a potential approach for the treatment of central nervous system disorders. Key fluorinated cyclopropane moieties were constructed through transition metal catalyzed [2 + 1]-cycloaddition of aromatic vinyl fluorides, and the absolute stereochemistry of the representative compound (-)-21a was established. Functional activity measuring calcium flux at 5-HT2 receptors reveals high potency for compounds (+)-21a-d. In particular, (+)-21b had no detectable 5-HT2B agonism and displayed reasonable selectivity against 5-HT2A . Molecular docking studies were further performed to explain the compounds' possible binding poses to the 5-HT2C receptor., (Published by Elsevier Masson SAS.)- Published
- 2019
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15. Glycogen Synthase Kinase-3 Inhibition Sensitizes Pancreatic Cancer Cells to Chemotherapy by Abrogating the TopBP1/ATR-Mediated DNA Damage Response.
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Ding L, Madamsetty VS, Kiers S, Alekhina O, Ugolkov A, Dube J, Zhang Y, Zhang JS, Wang E, Dutta SK, Schmitt DM, Giles FJ, Kozikowski AP, Mazar AP, Mukhopadhyay D, and Billadeau DD
- Subjects
- Adenocarcinoma genetics, Adenocarcinoma pathology, Animals, Apoptosis drug effects, Carcinoma, Pancreatic Ductal genetics, Carcinoma, Pancreatic Ductal pathology, Cell Line, Tumor, Cell Proliferation drug effects, Checkpoint Kinase 1, DNA Damage drug effects, Deoxycytidine analogs & derivatives, Deoxycytidine pharmacology, Flow Cytometry, Gene Expression Regulation, Neoplastic drug effects, Glycogen Synthase Kinase 3 beta antagonists & inhibitors, Humans, Indoles pharmacology, Maleimides pharmacology, Mice, Phosphorylation drug effects, Protein Kinase Inhibitors pharmacology, Signal Transduction drug effects, Gemcitabine, Adenocarcinoma drug therapy, Ataxia Telangiectasia Mutated Proteins genetics, Carcinoma, Pancreatic Ductal drug therapy, Carrier Proteins genetics, DNA-Binding Proteins genetics, Glycogen Synthase Kinase 3 beta genetics, Nuclear Proteins genetics
- Abstract
Purpose: Pancreatic ductal adenocarcinoma (PDAC) is a predominantly fatal common malignancy with inadequate treatment options. Glycogen synthase kinase 3β (GSK-3β) is an emerging target in human malignancies including PDAC. Experimental Design: Pancreatic cancer cell lines and patient-derived xenografts were treated with a novel GSK-3 inhibitor 9-ING-41 alone or in combination with chemotherapy. Activation of the DNA damage response pathway and S-phase arrest induced by gemcitabine were assessed in pancreatic tumor cells with pharmacologic inhibition or siRNA depletion of GSK-3 kinases by immunoblotting, flow cytometry, and immunofluorescence., Results: 9-ING-41 treatment significantly increased pancreatic tumor cell killing when combined with chemotherapy. Inhibition of GSK-3 by 9-ING-41 prevented gemcitabine-induced S-phase arrest suggesting an impact on the ATR-mediated DNA damage response. Both 9-ING-41 and siRNA depletion of GSK-3 kinases impaired the activation of ATR leading to the phosphorylation and activation of Chk1. Mechanistically, depletion or knockdown of GSK-3 kinases resulted in the degradation of the ATR-interacting protein TopBP1, thus limiting the activation of ATR in response to single-strand DNA damage., Conclusions: These data identify a previously unknown role for GSK-3 kinases in the regulation of the TopBP1/ATR/Chk1 DNA damage response pathway. The data also support the inclusion of patients with PDAC in clinical studies of 9-ING-41 alone and in combination with gemcitabine., (©2019 American Association for Cancer Research.)
- Published
- 2019
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16. Discovery of a New Isoxazole-3-hydroxamate-Based Histone Deacetylase 6 Inhibitor SS-208 with Antitumor Activity in Syngeneic Melanoma Mouse Models.
- Author
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Shen S, Hadley M, Ustinova K, Pavlicek J, Knox T, Noonepalle S, Tavares MT, Zimprich CA, Zhang G, Robers MB, Bařinka C, Kozikowski AP, and Villagra A
- Subjects
- Animals, CD8-Positive T-Lymphocytes cytology, Catalytic Domain, Cell Line, Tumor, Drug Discovery, Histone Deacetylase Inhibitors chemistry, Humans, Hydroxamic Acids chemistry, Isoxazoles chemistry, Macrophages cytology, Mice, Microsomes chemistry, Natural Killer T-Cells cytology, Transplantation, Isogeneic, Zebrafish, Zinc chemistry, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors pharmacology, Hydroxamic Acids pharmacology, Isoxazoles pharmacology, Melanoma drug therapy
- Abstract
Isoxazole is a five-membered heterocycle that is widely used in drug discovery endeavors. Here, we report the design, synthesis, and structural and biological characterization of SS-208, a novel HDAC6-selective inhibitor containing the isoxazole-3-hydroxamate moiety as a zinc-binding group as well as a hydrophobic linker. A crystal structure of the Danio rerio HDAC6/SS-208 complex reveals a bidentate coordination of the active-site zinc ion that differs from the preferred monodentate coordination observed for HDAC6 complexes with phenylhydroxamate-based inhibitors. While SS-208 has minimal effects on the viability of murine SM1 melanoma cells in vitro, it significantly reduced in vivo tumor growth in a murine SM1 syngeneic melanoma mouse model. These findings suggest that the antitumor activity of SS-208 is mainly mediated by immune-related antitumor activity as evidenced by the increased infiltration of CD8+ and NK+ T cells and the enhanced ratio of M1 and M2 macrophages in the tumor microenvironment.
- Published
- 2019
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17. Optimization of Drug Candidates That Inhibit the D-Loop Activity of RAD51.
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Budke B, Tueckmantel W, Miles K, Kozikowski AP, and Connell PP
- Subjects
- Cell Survival, Cycloaddition Reaction, DNA chemistry, DNA Repair drug effects, DNA Replication drug effects, Enzyme Inhibitors metabolism, HEK293 Cells, Humans, Molecular Structure, Oxidation-Reduction, Protein Binding, Pyrroles chemistry, Quinoxalines metabolism, Structure-Activity Relationship, Enzyme Inhibitors chemical synthesis, Quinoxalines chemical synthesis, Rad51 Recombinase antagonists & inhibitors
- Abstract
RAD51 is the central protein in homologous recombination (HR) repair, where it first binds ssDNA and then catalyzes strand invasion via a D-loop intermediate. Additionally, RAD51 plays a role in faithful DNA replication by protecting stalled replication forks; this requires RAD51 to bind DNA but may not require the strand invasion activity of RAD51. We previously described a small-molecule inhibitor of RAD51 named RI(dl)-2 (RAD51 inhibitor of D-loop formation #2, hereafter called 2 h), which inhibits D-loop activity while sparing ssDNA binding. However, 2 h is limited in its ability to inhibit HR in vivo, preventing only about 50 % of total HR events in cells. We sought to improve upon this by performing a structure-activity relationship (SAR) campaign for more potent analogues of 2 h. Most compounds were prepared from 1-(2-aminophenyl)pyrroles by forming the quinoxaline moiety either by condensation with aldehydes, then dehydrogenation of the resulting 4,5-dihydro intermediates, or by condensation with N,N'-carbonyldiimidazole, chlorination, and installation of the 4-substituent through Suzuki-Miyaura coupling. Many analogues exhibited enhanced activity against human RAD51, but in several of these compounds the increased inhibition was due to the introduction of dsDNA intercalation activity. We developed a sensitive assay to measure dsDNA intercalation, and identified two analogues of 2 h that promote complete HR inhibition in cells while exerting minimal intercalation activity., (© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2019
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18. Evaluation of Protein Kinase Inhibitors with PLK4 Cross-Over Potential in a Pre-Clinical Model of Cancer.
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Suri A, Bailey AW, Tavares MT, Gunosewoyo H, Dyer CP, Grupenmacher AT, Piper DR, Horton RA, Tomita T, Kozikowski AP, Roy SM, and Sredni ST
- Subjects
- Animals, Cell Line, Tumor, Cell Proliferation drug effects, Disease Models, Animal, Drug Evaluation, Preclinical, Enzyme Activation, Humans, Hydrophobic and Hydrophilic Interactions, Models, Molecular, Molecular Conformation, Molecular Structure, Neoplasms drug therapy, Neoplasms pathology, Protein Binding, Protein Kinase Inhibitors chemistry, Protein Serine-Threonine Kinases chemistry, Structure-Activity Relationship, Xenograft Model Antitumor Assays, Neoplasms metabolism, Protein Kinase Inhibitors pharmacology, Protein Serine-Threonine Kinases antagonists & inhibitors, Protein Serine-Threonine Kinases metabolism
- Abstract
Polo-like kinase 4 (PLK4) is a cell cycle-regulated protein kinase (PK) recruited at the centrosome in dividing cells. Its overexpression triggers centrosome amplification, which is associated with genetic instability and carcinogenesis. In previous work, we established that PLK4 is overexpressed in pediatric embryonal brain tumors (EBT). We also demonstrated that PLK4 inhibition exerted a cytostatic effect in EBT cells. Here, we examined an array of PK inhibitors (CFI-400945, CFI-400437, centrinone, centrinone-B, R-1530, axitinib, KW-2449, and alisertib) for their potential crossover to PLK4 by comparative structural docking and activity inhibition in multiple established embryonal tumor cell lines (MON, BT-12, BT-16, DAOY, D283). Our analyses demonstrated that: (1) CFI-400437 had the greatest impact overall, but similar to CFI-400945, it is not optimal for brain exposure. Also, their phenotypic anti-cancer impact may, in part, be a consequence of the inhibition of Aurora kinases (AURKs). (2) Centrinone and centrinone B are the most selective PLK4 inhibitors but they are the least likely to penetrate the brain. (3) KW-2449, R-1530 and axitinib are the ones predicted to have moderate-to-good brain penetration. In conclusion, a new selective PLK4 inhibitor with favorable physiochemical properties for optimal brain exposure can be beneficial for the treatment of EBT.
- Published
- 2019
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19. Brain Penetrable Histone Deacetylase 6 Inhibitor SW-100 Ameliorates Memory and Learning Impairments in a Mouse Model of Fragile X Syndrome.
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Kozikowski AP, Shen S, Pardo M, Tavares MT, Szarics D, Benoy V, Zimprich CA, Kutil Z, Zhang G, Bařinka C, Robers MB, Van Den Bosch L, Eubanks JH, and Jope RS
- Subjects
- Animals, Cognition drug effects, Disease Models, Animal, Fragile X Syndrome enzymology, Hippocampus drug effects, Hippocampus metabolism, Mice, Protein Processing, Post-Translational drug effects, Benzamides pharmacology, Fragile X Syndrome physiopathology, Histone Deacetylase 6 antagonists & inhibitors, Histone Deacetylase Inhibitors pharmacology, Learning drug effects, Memory drug effects, Quinolines pharmacology
- Abstract
Disease-modifying therapies are needed for Fragile X Syndrome (FXS), as at present there are no effective treatments or cures. Herein, we report on a tetrahydroquinoline-based selective histone deacetylase 6 (HDAC6) inhibitor SW-100, its pharmacological and ADMET properties, and its ability to improve upon memory performance in a mouse model of FXS, Fmr1
-/- mice. This small molecule demonstrates good brain penetrance, low-nanomolar potency for the inhibition of HDAC6 (IC50 = 2.3 nM), with at least a thousand-fold selectivity over all other class I, II, and IV HDAC isoforms. Moreover, through its inhibition of the α-tubulin deacetylase domain of HDAC6 (CD2), in cells SW-100 upregulates α-tubulin acetylation with no effect on histone acetylation and selectively restores the impaired acetylated α-tubulin levels in the hippocampus of Fmr1-/- mice. Lastly, SW-100 ameliorates several memory and learning impairments in Fmr1-/- mice, thus modeling the intellectual deficiencies associated with FXS, and hence providing a strong rationale for pursuing HDAC6-based therapies for the treatment of this rare disease.- Published
- 2019
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20. Molecular Basis for the Selective Inhibition of Histone Deacetylase 6 by a Mercaptoacetamide Inhibitor.
- Author
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Porter NJ, Shen S, Barinka C, Kozikowski AP, and Christianson DW
- Abstract
Mercaptoacetamide histone deacetylase inhibitors are neuroprotective agents that do not exhibit the genotoxicity associated with more commonly used hydroxamate inhibitors. Here, we present the crystal structure of a selective mercaptoacetamide complexed with the C-terminal catalytic domain of HDAC6. When compared with the structure of a mercaptoacetamide bound to the class I isozyme HDAC8, different interactions are observed with the conserved tandem histidine pair in the active site. These differences likely contribute to the selectivity for inhibition of HDAC6, an important target for cancer chemotherapy and the treatment of neurodegenerative disease., Competing Interests: The authors declare no competing financial interest.
- Published
- 2018
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21. 2-Aminoadipic Acid-C(O)-Glutamate Based Prostate-Specific Membrane Antigen Ligands for Potential Use as Theranostics.
- Author
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Nakajima R, Nováková Z, Tueckmantel W, Motlová L, Bařinka C, and Kozikowski AP
- Abstract
The design and synthesis of prostate specific membrane antigen (PSMA) ligands derived from 2-aminoadipic acid, a building block that has not previously been used to construct PSMA ligands, are reported. The effects of both the linker length and of an N-substituent of our PSMA ligands were probed, and X-ray structures of five of these ligands bound to PSMA were obtained. Among the ligands disclosed herein, 13b showed the highest inhibitory activity for PSMA. As ligand 13b can readily be radiolabeled since its fluorine atom is adjacent to the nitrogen atom of its pyridine ring, the use of this and related compounds as theranostics can be pursued., Competing Interests: The authors declare no competing financial interest.
- Published
- 2018
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22. HDAC6 is a therapeutic target in mutant GARS-induced Charcot-Marie-Tooth disease.
- Author
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Benoy V, Van Helleputte L, Prior R, d'Ydewalle C, Haeck W, Geens N, Scheveneels W, Schevenels B, Cader MZ, Talbot K, Kozikowski AP, Vanden Berghe P, Van Damme P, Robberecht W, and Van Den Bosch L
- Subjects
- Animals, Axonal Transport genetics, Cells, Cultured, Charcot-Marie-Tooth Disease physiopathology, Disease Models, Animal, Enzyme Inhibitors therapeutic use, Ganglia, Spinal cytology, Histone Deacetylase 6 genetics, Hydroxamic Acids therapeutic use, Indoles therapeutic use, Mice, Mice, Inbred C57BL, Mice, Transgenic, Motor Neurons drug effects, Motor Neurons metabolism, Neural Conduction genetics, Neuromuscular Junction pathology, Neuromuscular Junction physiopathology, Psychomotor Performance physiology, RNA, Small Interfering genetics, RNA, Small Interfering metabolism, Tubulin metabolism, Charcot-Marie-Tooth Disease genetics, Charcot-Marie-Tooth Disease therapy, Glycine-tRNA Ligase genetics, Histone Deacetylase 6 metabolism, Mutation genetics
- Abstract
Peripheral nerve axons require a well-organized axonal microtubule network for efficient transport to ensure the constant crosstalk between soma and synapse. Mutations in more than 80 different genes cause Charcot-Marie-Tooth disease, which is the most common inherited disorder affecting peripheral nerves. This genetic heterogeneity has hampered the development of therapeutics for Charcot-Marie-Tooth disease. The aim of this study was to explore whether histone deacetylase 6 (HDAC6) can serve as a therapeutic target focusing on the mutant glycyl-tRNA synthetase (GlyRS/GARS)-induced peripheral neuropathy. Peripheral nerves and dorsal root ganglia from the C201R mutant Gars mouse model showed reduced acetylated α-tubulin levels. In primary dorsal root ganglion neurons, mutant GlyRS affected neurite length and disrupted normal mitochondrial transport. We demonstrated that GlyRS co-immunoprecipitated with HDAC6 and that this interaction was blocked by tubastatin A, a selective inhibitor of the deacetylating function of HDAC6. Moreover, HDAC6 inhibition restored mitochondrial axonal transport in mutant GlyRS-expressing neurons. Systemic delivery of a specific HDAC6 inhibitor increased α-tubulin acetylation in peripheral nerves and partially restored nerve conduction and motor behaviour in mutant Gars mice. Our study demonstrates that α-tubulin deacetylation and disrupted axonal transport may represent a common pathogenic mechanism underlying Charcot-Marie-Tooth disease and it broadens the therapeutic potential of selective HDAC6 inhibition to other genetic forms of axonal Charcot-Marie-Tooth disease.
- Published
- 2018
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23. 5-HT 2C Agonists Modulate Schizophrenia-Like Behaviors in Mice.
- Author
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Pogorelov VM, Rodriguiz RM, Cheng J, Huang M, Schmerberg CM, Meltzer HY, Roth BL, Kozikowski AP, and Wetsel WC
- Subjects
- Acoustic Stimulation adverse effects, Amphetamine toxicity, Animals, Benzazepines pharmacology, Catalepsy drug therapy, Catalepsy etiology, Discrimination Learning drug effects, Disease Models, Animal, Drug Interactions, Exploratory Behavior drug effects, Female, Male, Mice, Mice, Inbred C3H, Mice, Inbred C57BL, Motivation drug effects, Neurotransmitter Agents metabolism, Recognition, Psychology drug effects, Schizophrenia chemically induced, Serotonin 5-HT2 Receptor Agonists chemistry, Social Behavior, Prepulse Inhibition drug effects, Schizophrenia drug therapy, Schizophrenia physiopathology, Serotonin 5-HT2 Receptor Agonists therapeutic use
- Abstract
All FDA-approved antipsychotic drugs (APDs) target primarily dopamine D
2 or serotonin (5-HT2A ) receptors, or both; however, these medications are not universally effective, they may produce undesirable side effects, and provide only partial amelioration of negative and cognitive symptoms. The heterogeneity of pharmacological responses in schizophrenic patients suggests that additional drug targets may be effective in improving aspects of this syndrome. Recent evidence suggests that 5-HT2C receptors may be a promising target for schizophrenia since their activation reduces mesolimbic nigrostriatal dopamine release (which conveys antipsychotic action), they are expressed almost exclusively in CNS, and have weight-loss-promoting capabilities. A difficulty in developing 5-HT2C agonists is that most ligands also possess 5-HT2B and/or 5-HT2A activities. We have developed selective 5-HT2C ligands and herein describe their preclinical effectiveness for treating schizophrenia-like behaviors. JJ-3-45, JJ-3-42, and JJ-5-34 reduced amphetamine-stimulated hyperlocomotion, restored amphetamine-disrupted prepulse inhibition, improved social behavior, and novel object recognition memory in NMDA receptor hypofunctioning NR1-knockdown mice, and were essentially devoid of catalepsy. However, they decreased motivation in a breakpoint assay and did not promote reversal learning in MK-801-treated mice. Somewhat similar effects were observed with lorcaserin, a 5-HT2C agonist with potent 5-HT2B and 5-HT2A agonist activities, which is approved for treating obesity. Microdialysis studies revealed that both JJ-3-42 and lorcaserin reduced dopamine efflux in the infralimbic cortex, while only JJ-3-42 decreased it in striatum. Collectively, these results provide additional evidence that 5-HT2C receptors are suitable drug targets with fewer side effects, greater therapeutic selectivity, and enhanced efficacy for treating schizophrenia and related disorders than current APDs.- Published
- 2017
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24. Synthesis and Pharmacological Evaluation of Selective Histone Deacetylase 6 Inhibitors in Melanoma Models.
- Author
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Tavares MT, Shen S, Knox T, Hadley M, Kutil Z, Bařinka C, Villagra A, and Kozikowski AP
- Abstract
Only a handful of therapies offer significant improvement in the overall survival in cases of melanoma, a cancer whose incidence has continued to rise in the past 30 years. In our effort to identify potent and isoform-selective histone deacetylase (HDAC) inhibitors as a therapeutic approach to melanoma, a series of new HDAC6 inhibitors based on the nexturastat A scaffold were prepared. The new analogues 4d , 4e , and 7b bearing added hydrophilic substituents, so as to establish additional hydrogen bonding on the rim of the HDAC6 catalytic pocket, exhibit improved potency against HDAC6 and retain selectivity over HDAC1. Compound 4d exhibits antiproliferative effects on several types of melanoma and lymphoma cells. Further studies indicates that 4d selectively increases acetylated tubulin levels in vitro and elicits an immune response through down-regulating cytokine IL-10. A preliminary in vivo efficacy study indicates that 4d possesses improved capability to inhibit melanoma tumor growth and that this effect is based on the regulation of inflammatory and immune responses.
- Published
- 2017
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25. Controlling Extra- and Intramacrophagic Mycobacterium abscessus by Targeting Mycolic Acid Transport.
- Author
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Viljoen A, Herrmann JL, Onajole OK, Stec J, Kozikowski AP, and Kremer L
- Subjects
- Anti-Bacterial Agents therapeutic use, Apoptosis, Bacterial Proteins antagonists & inhibitors, Biological Transport drug effects, Cystic Fibrosis microbiology, Cytosol metabolism, Humans, Indoles analysis, Membrane Transport Proteins genetics, Membrane Transport Proteins metabolism, Mycobacterium Infections, Nontuberculous drug therapy, Mycobacterium abscessus metabolism, Phagocytosis, Phagosomes metabolism, Phagosomes microbiology, Piperidines analysis, Anti-Bacterial Agents pharmacology, Indoles pharmacology, Macrophages microbiology, Mycobacterium Infections, Nontuberculous microbiology, Mycobacterium abscessus drug effects, Mycolic Acids metabolism, Piperidines pharmacology
- Abstract
Mycobacterium abscessus is a rapidly growing mycobacterium (RGM) causing serious infections especially among cystic fibrosis patients. Extremely limited therapeutic options against M. abscessus and a rise in infections with this mycobacterium require novel chemotherapies and a better understanding of how the bacterium causes infection. Different from most RGM, M. abscessus can survive inside macrophages and persist for long durations in infected tissues. We recently delineated differences in the infective programs followed by smooth (S) and rough (R) variants of M. abscessus . Unexpectedly, we found that the S variant behaves like pathogenic slow growing mycobacteria, through maintaining a block on the phagosome maturation process and by inducing phagosome-cytosol communications. On the other hand, R variant infection triggers autophagy and apoptosis, reminiscent of the way that macrophages control RGM. However, the R variant has an exquisite capacity to form extracellular cords, allowing these bacteria to rapidly divide and evade phagocytosis. Therefore, new chemotherapeutic interventions against M. abscessus need to efficiently deal with both the reservoir of intracellular bacilli and the extracellular cords. In this context, we recently identified two chemical entities that were very effective against both M. abscessus populations. Although being structurally unrelated these two chemotypes inhibit the activity of the essential mycolic acid transporter, MmpL3. In this Perspective, we aimed to highlight recent insights into how M. abscessus interacts with phagocytic cells and how the inhibition of mycolic acid transport in this pathogenic RGM could be an efficient means to control both intracellular and extracellular populations of the bacterium.
- Published
- 2017
- Full Text
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26. Histone/protein deacetylase 11 targeting promotes Foxp3+ Treg function.
- Author
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Huang J, Wang L, Dahiya S, Beier UH, Han R, Samanta A, Bergman J, Sotomayor EM, Seto E, Kozikowski AP, and Hancock WW
- Subjects
- Allografts, Animals, Forkhead Transcription Factors metabolism, Gene Expression Profiling methods, Graft Survival drug effects, Graft Survival genetics, Graft Survival immunology, HEK293 Cells, Heart Transplantation methods, Histone Deacetylase Inhibitors pharmacology, Histone Deacetylases genetics, Histone Deacetylases metabolism, Histones metabolism, Humans, Male, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Knockout, Mice, Transgenic, T-Lymphocytes, Regulatory metabolism, Forkhead Transcription Factors immunology, Histone Deacetylases immunology, Histones immunology, T-Lymphocytes, Regulatory immunology
- Abstract
Current interest in Foxp3+ T-regulatory (Treg) cells as therapeutic targets in transplantation is largely focused on their harvesting pre-transplant, expansion and infusion post-transplantation. An alternate strategy of pharmacologic modulation of Treg function using histone/protein deacetylase inhibitors (HDACi) may allow more titratable and longer-term dosing. However, the effects of broadly acting HDACi vary, such that HDAC isoform-selective targeting is likely required. We report data from mice with constitutive or conditional deletion of HDAC11 within Foxp3+ Treg cells, and their use, along with small molecule HDAC11 inhibitors, in allograft models. Global HDAC11 deletion had no effect on health or development, and compared to WT controls, Foxp3+ Tregs lacking HDAC11 showed increased suppressive function, and increased expression of Foxp3 and TGF-β. Likewise, compared to WT recipients, conditional deletion of HDAC11 within Tregs led to long-term survival of fully MHC-mismatched cardiac allografts, and prevented development of transplant arteriosclerosis in an MHC class II-mismatched allograft model. The translational significance of HDAC11 targeting was shown by the ability of an HDAC11i to promote long-term allograft allografts in fully MHC-disparate strains. These data are powerful stimuli for the further development and testing of HDAC11-selective pharmacologic inhibitors, and may ultimately provide new therapies for transplantation and autoimmune diseases.
- Published
- 2017
- Full Text
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27. Discovery of N-Substituted (2-Phenylcyclopropyl)methylamines as Functionally Selective Serotonin 2C Receptor Agonists for Potential Use as Antipsychotic Medications.
- Author
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Zhang G, Cheng J, McCorvy JD, Lorello PJ, Caldarone BJ, Roth BL, and Kozikowski AP
- Subjects
- Animals, Antipsychotic Agents chemical synthesis, Antipsychotic Agents pharmacology, Benzylamines chemical synthesis, Benzylamines pharmacology, Cyclopropanes chemical synthesis, Cyclopropanes pharmacology, HEK293 Cells, Humans, Hyperkinesis chemically induced, Hyperkinesis drug therapy, Male, Methylamines chemical synthesis, Methylamines pharmacology, Mice, Inbred C57BL, Receptor, Serotonin, 5-HT2B metabolism, Serotonin 5-HT2 Receptor Agonists chemical synthesis, Serotonin 5-HT2 Receptor Agonists pharmacology, Stereoisomerism, Structure-Activity Relationship, beta-Arrestins metabolism, Antipsychotic Agents chemistry, Benzylamines chemistry, Cyclopropanes chemistry, Methylamines chemistry, Receptor, Serotonin, 5-HT2C metabolism, Serotonin 5-HT2 Receptor Agonists chemistry
- Abstract
A series of N-substituted (2-phenylcyclopropyl)methylamines were designed and synthesized, with the aim of finding serotonin 2C (5-HT
2C )-selective agonists with a preference for Gq signaling. A number of these compounds exhibit 5-HT2C selectivity with a preference for Gq -mediated signaling compared with β-arrestin recruitment. Furthermore, the N-methyl compound (+)-15a, which displayed an EC50 of 23 nM in the calcium flux assay while showing no β-arrestin recruitment activity, is the most functionally selective 5-HT2C agonist reported to date. The N-benzyl compound (+)-19, which showed an EC50 of 24 nM at the 5-HT2C receptor, is fully selective over the 5-HT2B receptor. In an amphetamine-induced hyperactivity model, compound (+)-19 showed significant antipsychotic-drug-like activity. These novel compounds shed light on the role of functional selectivity at the 5-HT2C receptor with respect to antipsychotic activity.- Published
- 2017
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28. Targeting Mycolic Acid Transport by Indole-2-carboxamides for the Treatment of Mycobacterium abscessus Infections.
- Author
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Kozikowski AP, Onajole OK, Stec J, Dupont C, Viljoen A, Richard M, Chaira T, Lun S, Bishai W, Raj VS, Ordway D, and Kremer L
- Subjects
- Biological Transport drug effects, Cell Line, Cord Factors metabolism, Humans, Microbial Sensitivity Tests, Mycobacterium metabolism, Mycobacterium Infections drug therapy, Mycobacterium Infections microbiology, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents pharmacology, Indoles chemistry, Indoles pharmacology, Mycobacterium drug effects, Mycolic Acids metabolism
- Abstract
Mycobacterium abscessus is a fast-growing, multidrug-resistant organism that has emerged as a clinically significant pathogen in cystic fibrosis (CF) patients. The intrinsic resistance of M. abscessus to most commonly available antibiotics seriously restricts chemotherapeutic options. Herein, we report the potent activity of a series of indolecarboxamides against M. abscessus. The lead compounds, 6 and 12, exhibited strong activity in vitro against a wide panel of M. abscessus isolates and in infected macrophages. High resistance levels to the indolecarboxamides appear to be associated with an A309P mutation in the mycolic acid transporter MmpL3. Biochemical analyses demonstrated that while de novo mycolic acid synthesis remained unaffected, the indolecarboxamides strongly inhibited the transport of trehalose monomycolate, resulting in the loss of trehalose dimycolate production and abrogating mycolylation of arabinogalactan. Our data introduce a hereto unexploited chemical structure class active against M. abscessus infections with promising translational development possibilities for the treatment of CF patients.
- Published
- 2017
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- View/download PDF
29. Design and Synthesis of Mercaptoacetamides as Potent, Selective, and Brain Permeable Histone Deacetylase 6 Inhibitors.
- Author
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Lv W, Zhang G, Barinka C, Eubanks JH, and Kozikowski AP
- Abstract
A series of nonhydroxamate HDAC6 inhibitors were prepared in our effort to develop potent and selective compounds for possible use in central nervous system (CNS) disorders, thus obviating the genotoxicity often associated with the hydroxamates. Halogens are incorporated in the cap groups of the designed mercaptoacetamides in order to increase brain accessibility. The indole analogue 7e and quinoline analogue 13a displayed potent HDAC6 inhibitory activity (IC
50 , 11 and 2.8 nM) and excellent selectivity against HDAC1. Both 7e and 13a together with their ester prodrug 14 and disulfide prodrugs 15 and 16 were found to be effective in promoting tubulin acetylation in HEK cells. The disulfide prodrugs 15 and 16 also released a stable concentration of 7e and 13a upon microsomal incubation. Administration of 15 and 16 in vivo was found to trigger an increase of tubulin acetylation in mouse cortex. These results suggest that further exploration of these compounds for the treatment of CNS disorders is warranted.- Published
- 2017
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30. Synthesis and biological evaluation of novel hybrids of highly potent and selective α4β2-Nicotinic acetylcholine receptor (nAChR) partial agonists.
- Author
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Zhang HK, Eaton JB, Fedolak A, Gunosewoyo H, Onajole OK, Brunner D, Lukas RJ, Yu LF, and Kozikowski AP
- Subjects
- Animals, Behavior drug effects, Depression drug therapy, Inhibitory Concentration 50, Male, Mice, Mice, Inbred C57BL, Molecular Structure, Nicotinic Agonists chemistry, Nicotinic Agonists therapeutic use, Receptors, Nicotinic chemistry, Receptors, Nicotinic metabolism, Swimming, Varenicline chemistry, Varenicline pharmacology, Nicotinic Agonists chemical synthesis, Nicotinic Agonists pharmacology
- Abstract
We previously reported the cyclopropylpyridine and isoxazolylpyridine ether scaffolds to be versatile building blocks for creating potent α4β2 nicotinic acetylcholine receptor (nAChR) partial agonists with excellent selectivity over the α3β4 subtype. In our continued efforts to develop therapeutic nicotinic ligands, seven novel hybrid compounds were rationally designed, synthesized, and evaluated in [
3 H]epibatidine binding competition studies. Incorporation of a cyclopropane- or isoxazole-containing side chain onto the 5-position of 1-(pyridin-3-yl)-1,4-diazepane or 2-(pyridin-3-yl)-2,5-diazabicyclo[2.2.1]heptane led to highly potent and selective α4β2* nAChR partial agonists with Ki values of 0.5-51.4 nM for α4β2 and negligible affinities for α3β4 and α7. Moreover, compounds 21, 25, and 30 maintained the functional profiles (EC50 and IC50 values of 15-50 nM) of the parent azetidine-containing compounds 3 and 4 in the86 Rb+ ion flux assays. In vivo efficacy of the most promising compound 21 was confirmed in the mouse SmartCube® platform and classical forced swim tests, supporting the potential use of α4β2 partial agonists for treatment of depression., (Copyright © 2016 Elsevier Masson SAS. All rights reserved.)- Published
- 2016
- Full Text
- View/download PDF
31. Recent Developments Using Small Molecules to Target RAD51: How to Best Modulate RAD51 for Anticancer Therapy?
- Author
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Budke B, Lv W, Kozikowski AP, and Connell PP
- Subjects
- Antineoplastic Agents chemistry, Humans, Molecular Structure, Neoplasms metabolism, Neoplasms pathology, Rad51 Recombinase metabolism, Small Molecule Libraries chemistry, Antineoplastic Agents pharmacology, Neoplasms drug therapy, Rad51 Recombinase antagonists & inhibitors, Small Molecule Libraries pharmacology
- Abstract
Homologous recombination (HR) is an evolutionarily conserved DNA repair process. Overexpression of the key HR protein RAD51 is a common feature of malignant cells. RAD51 plays two distinct genome-stabilizing roles, including HR-mediated repair of double-strand breaks (DSBs) and the promotion of replication fork stability during replication stress. Because upregulation of RAD51 in cancer cells can promote tumor resistance to DNA-damaging oncologic therapies, we and others have worked to develop cancer therapeutics that target various aspects of RAD51 protein function. Herein, we provide an overview of recent developments in this field, together with our perspectives on the challenges associated with these evolving anticancer strategies., (© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
- Full Text
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32. Design and Discovery of Functionally Selective Serotonin 2C (5-HT 2C ) Receptor Agonists.
- Author
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Cheng J, McCorvy JD, Giguere PM, Zhu H, Kenakin T, Roth BL, and Kozikowski AP
- Subjects
- Dose-Response Relationship, Drug, Humans, Molecular Structure, Serotonin 5-HT2 Receptor Agonists chemical synthesis, Serotonin 5-HT2 Receptor Agonists chemistry, Structure-Activity Relationship, Drug Discovery, Receptor, Serotonin, 5-HT2C metabolism, Serotonin 5-HT2 Receptor Agonists pharmacology
- Abstract
On the basis of the structural similarity of our previous 5-HT
2C agonists with the melatonin receptor agonist tasimelteon and the putative biological cross-talk between serotonergic and melatonergic systems, a series of new (2,3-dihydro)benzofuran-based compounds were designed and synthesized. The compounds were evaluated for their selectivity toward 5-HT2A , 5-HT2B , and 5-HT2C receptors in the calcium flux assay with the ultimate goal to generate selective 5-HT2C agonists. Selected compounds were studied for their functional selectivity by comparing their transduction efficiency at the G protein signaling pathway versus β-arrestin recruitment. The most functionally selective compound (+)-7e produced weak β-arrestin recruitment and also demonstrated less receptor desensitization compared to serotonin in both calcium flux and phosphoinositide (PI) hydrolysis assays. We report for the first time that selective 5-HT2C agonists possessing weak β-arrestin recruitment can produce distinct receptor desensitization properties.- Published
- 2016
- Full Text
- View/download PDF
33. Indole-2-carboxamide-based MmpL3 Inhibitors Show Exceptional Antitubercular Activity in an Animal Model of Tuberculosis Infection.
- Author
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Stec J, Onajole OK, Lun S, Guo H, Merenbloom B, Vistoli G, Bishai WR, and Kozikowski AP
- Subjects
- Animals, Antitubercular Agents pharmacokinetics, Antitubercular Agents pharmacology, Bacterial Proteins metabolism, Disease Models, Animal, Drug Design, Female, Humans, Indoles pharmacokinetics, Indoles pharmacology, Membrane Transport Proteins metabolism, Mice, Inbred BALB C, Microbial Sensitivity Tests, Models, Molecular, Molecular Docking Simulation, Molecular Targeted Therapy, Mycobacterium tuberculosis metabolism, Tuberculosis microbiology, Tuberculosis, Multidrug-Resistant drug therapy, Tuberculosis, Multidrug-Resistant metabolism, Antitubercular Agents chemistry, Antitubercular Agents therapeutic use, Bacterial Proteins antagonists & inhibitors, Indoles chemistry, Indoles therapeutic use, Mycobacterium tuberculosis drug effects, Tuberculosis drug therapy
- Abstract
Our team had previously identified certain indolecarboxamides that represented a new chemical scaffold that showed promising anti-TB activity at both an in vitro and in vivo level. Based on mutational analysis using bacteria found resistant to one of these indolecarboxamides, we identified the trehalose monomycolate transporter MmpL3 as the likely target of these compounds. In the present work, we now further elaborate on the SAR of these compounds, which has led in turn to the identification of a new analog, 4,6-difluoro-N-((1R,2R,3R,5S)-2,6,6-trimethylbicyclo[3.1.1]heptan-3-yl)-1H-indole-2-carboxamide (26), that shows excellent activity against drug-sensitive (MIC = 0.012 μM; SI ≥ 16000), multidrug-resistant (MDR), and extensively drug-resistant (XDR) Mycobacterium tuberculosis strains, has superior ADMET properties, and shows excellent activity in the TB aerosol lung infection model. Compound 26 is also shown to work in synergy with rifampin. Because of these properties, we believe that indolecarboxamide 26 is a possible candidate for advancement to human clinical trials.
- Published
- 2016
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34. Synthesis and Behavioral Studies of Chiral Cyclopropanes as Selective α4β2-Nicotinic Acetylcholine Receptor Partial Agonists Exhibiting an Antidepressant Profile. Part III.
- Author
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Onajole OK, Vallerini GP, Eaton JB, Lukas RJ, Brunner D, Caldarone BJ, and Kozikowski AP
- Subjects
- Animals, Cyclopropanes chemistry, Male, Mice, Structure-Activity Relationship, Antidepressive Agents pharmacology, Behavior, Animal drug effects, Cyclopropanes pharmacology, Motor Activity drug effects, Nicotinic Agonists pharmacology, Receptors, Nicotinic metabolism
- Abstract
We report the synthesis and biological characterization of novel derivatives of 3-[(1-methyl-2(S)-pyrrolidinyl)methoxy]-5-cyclopropylpyridine (4a-f and 5) as potent and highly selective α4β2-nicotinic acetylcholine receptor (nAChR) full or partial agonists. A systematic structure-activity study was carried out on the previously described compound 3b, particularly concerning its (2-methoxyethyl)cyclopropyl side-chain, in an effort to improve its metabolic stability while maintaining receptor selectivity. Compound 4d exhibited very similar subnanomolar binding affinity for α4β2- and α4β2*-nAChRs compared to 3b, and it showed excellent potency in activating high-sensitivity (HS) α4β2-nAChRs with an EC50 value of 8.2 nM. Testing of 4d in the SmartCube assay revealed that the compound has a combined antidepressant plus antipsychotic signature. In the forced swim test at a dose of 30 mg/kg given intraperitoneally, 4d was found to be as efficacious as sertraline, thus providing evidence of the potential use of the compound as an antidepressant. Additional promise for use of 4d in humans comes from pharmacokinetic studies in mice indicating brain penetration, and additional assays show compound stability in the presence of human microsomes and hepatocytes. Thus, 4d has a very favorable preclinical drug profile.
- Published
- 2016
- Full Text
- View/download PDF
35. Development of Small Molecules that Specifically Inhibit the D-loop Activity of RAD51.
- Author
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Lv W, Budke B, Pawlowski M, Connell PP, and Kozikowski AP
- Subjects
- Cell Line, Cell Survival drug effects, Dose-Response Relationship, Drug, Humans, Molecular Structure, Rad51 Recombinase metabolism, Small Molecule Libraries chemical synthesis, Small Molecule Libraries chemistry, Structure-Activity Relationship, Rad51 Recombinase antagonists & inhibitors, Small Molecule Libraries pharmacology
- Abstract
RAD51 is the central protein in homologous recombination (HR) DNA repair and represents a therapeutic target in oncology. Herein we report a novel class of RAD51 inhibitors that were identified by high throughput screening. In contrast to many previously reported RAD51 inhibitors, our lead compound 1 is capable of blocking RAD51-mediated D-loop formation (IC50 21.3 ± 7.8 μM) at concentrations that do not influence RAD51 binding to ssDNA. In human cells, 1 inhibits HR (IC50 13.1 ± 1.6 μM) without blocking RAD51's ability to assemble into subnuclear foci at sites of DNA damage. We determined that the active constituent of 1 is actually an oxidized derivative (termed RI(dl)-1 or 8) of the original screening compound. Our SAR campaign also yielded RI(dl)-2 (hereafter termed 9h), which effectively blocks RAD51's D-loop activity in biochemical systems (IC50 11.1 ± 1.3 μM) and inhibits HR activity in human cells (IC50 3.0 ± 1.8 μM).
- Published
- 2016
- Full Text
- View/download PDF
36. GSK-3β Governs Inflammation-Induced NFATc2 Signaling Hubs to Promote Pancreatic Cancer Progression.
- Author
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Baumgart S, Chen NM, Zhang JS, Billadeau DD, Gaisina IN, Kozikowski AP, Singh SK, Fink D, Ströbel P, Klindt C, Zhang L, Bamlet WR, Koenig A, Hessmann E, Gress TM, Ellenrieder V, and Neesse A
- Subjects
- Animals, Binding Sites, Cell Line, Tumor, Disease Models, Animal, Disease Progression, Gene Expression, Genes, ras, Humans, Mice, Mice, Knockout, Multiprotein Complexes metabolism, NFATC Transcription Factors genetics, Nucleotide Motifs, Pancreatic Neoplasms genetics, Phosphorylation, Protein Binding, Protein Stability, STAT3 Transcription Factor metabolism, Glycogen Synthase Kinase 3 beta metabolism, Inflammation metabolism, NFATC Transcription Factors metabolism, Pancreatic Neoplasms metabolism, Pancreatic Neoplasms pathology, Signal Transduction
- Abstract
We aimed to investigate the mechanistic, functional, and therapeutic role of glycogen synthase kinase 3β (GSK-3β) in the regulation and activation of the proinflammatory oncogenic transcription factor nuclear factor of activated T cells (NFATc2) in pancreatic cancer. IHC, qPCR, immunoblotting, immunofluorescence microscopy, and proliferation assays were used to analyze mouse and human tissues and cell lines. Protein-protein interactions and promoter regulation were analyzed by coimmunoprecipitation, DNA pulldown, reporter, and ChIP assays. Preclinical assays were performed using a variety of pancreatic cancer cells lines, xenografts, and a genetically engineered mouse model (GEMM). GSK-3β-dependent SP2 phosphorylation mediates NFATc2 protein stability in the nucleus of pancreatic cancer cells stimulating pancreatic cancer growth. In addition to protein stabilization, GSK-3β also maintains NFATc2 activation through a distinct mechanism involving stabilization of NFATc2-STAT3 complexes independent of SP2 phosphorylation. For NFATc2-STAT3 complex formation, GSK-3β-mediated phosphorylation of STAT3 at Y705 is required to stimulate euchromatin formation of NFAT target promoters, such as cyclin-dependent kinase-6, which promotes tumor growth. Finally, preclinical experiments suggest that targeting the NFATc2-STAT3-GSK-3β module inhibits proliferation and tumor growth and interferes with inflammation-induced pancreatic cancer progression in Kras(G12D) mice. In conclusion, we describe a novel mechanism by which GSK-3β fine-tunes NFATc2 and STAT3 transcriptional networks to integrate upstream signaling events that govern pancreatic cancer progression and growth. Furthermore, the therapeutic potential of GSK-3β is demonstrated for the first time in a relevant Kras and inflammation-induced GEMM for pancreatic cancer., (©2016 American Association for Cancer Research.)
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- 2016
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37. Bicyclic-Capped Histone Deacetylase 6 Inhibitors with Improved Activity in a Model of Axonal Charcot-Marie-Tooth Disease.
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Shen S, Benoy V, Bergman JA, Kalin JH, Frojuello M, Vistoli G, Haeck W, Van Den Bosch L, and Kozikowski AP
- Subjects
- Acetylation drug effects, Animals, Cell Line, Tumor, Cells, Cultured, Disease Models, Animal, Ganglia, Spinal cytology, Histone Deacetylase 6, Histone Deacetylase Inhibitors chemistry, Histone Deacetylase Inhibitors pharmacology, Histone Deacetylases genetics, Humans, Interleukin-2 genetics, Mice, Mice, Transgenic, Mutation genetics, Neuroblastoma pathology, Neurons drug effects, Neurons enzymology, Tubulin genetics, Tubulin metabolism, Charcot-Marie-Tooth Disease drug therapy, Charcot-Marie-Tooth Disease enzymology, Histone Deacetylase Inhibitors therapeutic use, Histone Deacetylases metabolism
- Abstract
Charcot-Marie-Tooth (CMT) disease is a disorder of the peripheral nervous system where progressive degeneration of motor and sensory nerves leads to motor problems and sensory loss and for which no pharmacological treatment is available. Recently, it has been shown in a model for the axonal form of CMT that histone deacetylase 6 (HDAC6) can serve as a target for the development of a pharmacological therapy. Therefore, we aimed at developing new selective and activity-specific HDAC6 inhibitors with improved biochemical properties. By utilizing a bicyclic cap as the structural scaffold from which to build upon, we developed several analogues that showed improved potency compared to tubastatin A while maintaining excellent selectivity compared to HDAC1. Further screening in N2a cells examining both the acetylation of α-tubulin and histones narrowed down the library of compounds to three potent and selective HDAC6 inhibitors. In mutant HSPB1-expressing DRG neurons, serving as an in vitro model for CMT2, these inhibitors were able to restore the mitochondrial axonal transport deficits. Combining structure-based development of HDAC6 inhibitors, screening in N2a cells and in a neuronal model for CMT2F, and preliminary ADMET and pharmacokinetic profiles, resulted in the selection of compound 23d that possesses improved biochemical, functional, and druglike properties compared to tubastatin A.
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- 2016
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38. Further Advances in Optimizing (2-Phenylcyclopropyl)methylamines as Novel Serotonin 2C Agonists: Effects on Hyperlocomotion, Prepulse Inhibition, and Cognition Models.
- Author
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Cheng J, Giguere PM, Schmerberg CM, Pogorelov VM, Rodriguiz RM, Huang XP, Zhu H, McCorvy JD, Wetsel WC, Roth BL, and Kozikowski AP
- Subjects
- Animals, Brain metabolism, Catalepsy chemically induced, Central Nervous System Stimulants, Dextroamphetamine, Drug Design, Drug Evaluation, Preclinical, Ether-A-Go-Go Potassium Channels antagonists & inhibitors, Female, Humans, Hyperkinesis chemically induced, Hyperkinesis drug therapy, Male, Mice, Mice, Inbred C57BL, Microsomes, Liver metabolism, Recognition, Psychology drug effects, Schizophrenia drug therapy, Schizophrenic Psychology, Structure-Activity Relationship, Substrate Specificity, Cognition drug effects, Hyperkinesis psychology, Prepulse Inhibition drug effects, Receptor, Serotonin, 5-HT2C drug effects, Serotonin 5-HT2 Receptor Agonists chemical synthesis, Serotonin 5-HT2 Receptor Agonists pharmacology
- Abstract
A series of novel compounds with two halogen substituents have been designed and synthesized to further optimize the 2-phenylcyclopropylmethylamine scaffold in the quest for drug-like 5-HT2C agonists. Compound (+)-22a was identified as a potent 5-HT2C receptor agonist, with good selectivity against the 5-HT2B and the 5-HT2A receptors. ADMET assays showed that compound (+)-22a possessed desirable properties in terms of its microsomal stability, and CYP and hERG inhibition, along with an excellent brain penetration profile. Evaluation of (+)-22a in animal models of schizophrenia-related behaviors revealed that it had a desirable activity profile, as it reduced d-amphetamine-stimulated hyperlocomotion in the open field test, it restored d-amphetamine-disrupted prepulse inhibition, it induced cognitive improvements in the novel object recognition memory test in NR1-KD animals, and it produced very little catalepsy relative to haloperidol. These data support the further development of (+)-22a as a drug candidate for the treatment of schizophrenia.
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- 2016
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39. Identification of HDAC6-Selective Inhibitors of Low Cancer Cell Cytotoxicity.
- Author
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Gaisina IN, Tueckmantel W, Ugolkov A, Shen S, Hoffen J, Dubrovskyi O, Mazar A, Schoon RA, Billadeau D, and Kozikowski AP
- Subjects
- Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Apoptosis drug effects, Cell Line, Tumor, Cell Proliferation drug effects, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Histone Deacetylase 6, Histone Deacetylase Inhibitors chemical synthesis, Histone Deacetylase Inhibitors chemistry, Humans, Molecular Structure, Pancreatic Neoplasms enzymology, Structure-Activity Relationship, Antineoplastic Agents pharmacology, Histone Deacetylase Inhibitors pharmacology, Histone Deacetylases metabolism, Pancreatic Neoplasms pathology
- Abstract
The histone deacetylases (HDACs) occur in 11 different isoforms, and these enzymes regulate the activity of a large number of proteins involved in cancer initiation and progression. The discovery of isoform-selective HDAC inhibitors (HDACIs) is desirable, as it is likely that such compounds would avoid some of the undesirable side effects found with the first-generation inhibitors. A series of HDACIs previously reported by us were found to display some selectivity for HDAC6 and to induce cell-cycle arrest and apoptosis in pancreatic cancer cells. In the present work, we show that structural modification of these isoxazole-based inhibitors leads to high potency and selectivity for HDAC6 over HDAC1-3 and HDAC10, while unexpectedly abolishing their ability to block cell growth. Three inhibitors with lower HDAC6 selectivity inhibit the growth of cell lines BxPC3 and L3.6pl, and they only induce apoptosis in L3.6pl cells. We conclude that HDAC6 inhibition alone is insufficient for disruption of cell growth, and that some degree of class 1 HDAC inhibition is required. Moreover, the highly selective HDAC6Is reported herein that are weakly cytotoxic may find use in cancer immune system reactivation., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
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- 2016
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40. Why Hydroxamates May Not Be the Best Histone Deacetylase Inhibitors--What Some May Have Forgotten or Would Rather Forget?
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Shen S and Kozikowski AP
- Subjects
- Drug Discovery, Histone Deacetylase Inhibitors chemistry, Humans, Hydroxamic Acids chemistry, Molecular Structure, Histone Deacetylase Inhibitors pharmacology, Histone Deacetylases metabolism, Hydroxamic Acids pharmacology
- Abstract
Hydroxamate-based histone deacetylase inhibitors (HDACIs) have been approved as therapeutic agents by the US Food and Drug Administration for use in oncology applications. While the potential utility of such HDACIs in other areas of medicinal chemistry is tremendous, there are significant concerns that "pan-HDAC inhibitors" may be too broadly acting and/or toxic for clinical use beyond oncology. In addition to the isozyme selectivity challenge, the potential mutagenicity of hydroxamate-containing HDAC inhibitors represents a major hindrance in their application to other therapeutic areas. Herein we report on the mutagenicity of known hydroxamates, discuss the mechanisms responsible for their genotoxicity, and review some of the current alternatives to hydroxamates. We conclude that the hydroxamate group, while providing high-potency HDACIs, is not necessarily the best zinc-binding group for HDACI drug discovery., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
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- 2016
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41. Exploration of the labeling of [11C]tubastatin A at the hydroxamic acid site with [11C]carbon monoxide.
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Lu S, Zhang Y, Kalin JH, Cai L, Kozikowski AP, and Pike VW
- Subjects
- Carbon Radioisotopes chemistry, Carbon Monoxide chemistry, Hydroxamic Acids chemistry, Indoles chemistry, Radiopharmaceuticals chemical synthesis
- Abstract
We aimed to label tubastatin A (1) with carbon-11 (t1/2 = 20.4 min) in the hydroxamic acid site to provide a potential radiotracer for imaging histone deacetylase 6 in vivo with positron emission tomography. Initial attempts at a one-pot Pd-mediated insertion of [(11)C]carbon monoxide between the aryl iodide (2) and hydroxylamine gave low radiochemical yields (<5%) of [(11) C]1. Labeling was achieved in useful radiochemical yields (16.1 ± 5.6%, n = 4) through a two-step process based on Pd-mediated insertion of [(11)C]carbon monoxide between the aryl iodide (2) and p-nitrophenol to give the [(11)C]p-nitrophenyl ester ([(11)C]5), followed by ultrasound-assisted hydroxyaminolysis of the activated ester with excess hydroxylamine in a DMSO/THF mixture in the presence of a strong phosphazene base P1-t-Bu. However, success in labeling the hydroxamic acid group of [(11)C]tubastatin A was not transferable to the labeling of three other model hydroxamic acids., (Copyright © 2015 John Wiley & Sons, Ltd.)
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- 2016
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42. We Need 2C but Not 2B: Developing Serotonin 2C (5-HT2C) Receptor Agonists for the Treatment of CNS Disorders.
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Cheng J and Kozikowski AP
- Subjects
- Amines therapeutic use, Central Nervous System Diseases drug therapy, Central Nervous System Diseases pathology, Humans, Receptor, Serotonin, 5-HT2C metabolism, Serotonin 5-HT2 Receptor Agonists therapeutic use, Small Molecule Libraries chemistry, Structure-Activity Relationship, Amines chemistry, Receptor, Serotonin, 5-HT2C chemistry, Serotonin 5-HT2 Receptor Agonists chemistry
- Abstract
The serotonin 2C (5-HT2C ) receptor has been identified as a potential drug target for the treatment of a variety of central nervous system (CNS) disorders, such as obesity, substance abuse, and schizophrenia. In this Viewpoint article, recent progress in developing selective 5-HT2C agonists for use in treating these disorders is summarized, including the work of our group. Challenges in this field and the possible future directions are described. Homology modeling as a method to predict the binding modes of 5-HT2C ligands to the receptor is also discussed. Compared to known ligands, the improved pharmacological profiles of the 2-phenylcyclopropylmethylamine-based 5-HT2C agonists make them preferred candidates for further studies., (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2015
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43. Thiol-Based Potent and Selective HDAC6 Inhibitors Promote Tubulin Acetylation and T-Regulatory Cell Suppressive Function.
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Segretti MC, Vallerini GP, Brochier C, Langley B, Wang L, Hancock WW, and Kozikowski AP
- Abstract
Several new mercaptoacetamides were synthesized and studied as HDAC6 inhibitors. One compound, 2b, bearing an aminoquinoline cap group, was found to show 1.3 nM potency at HDAC6, with >3000-fold selectivity over HDAC1. 2b also showed excellent efficacy at increasing tubulin acetylation in rat primary cortical cultures, inducing a 10-fold increase in acetylated tubulin at 1 μM. To assess possible therapeutic effects, compounds were assayed for their ability to increase T-regulatory (Treg) suppressive function. Some but not all of the compounds increased Treg function, and thereby decreased conventional T cell activation and proliferation in vitro.
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- 2015
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44. Design and Synthesis of (2-(5-Chloro-2,2-dimethyl-2,3-dihydrobenzofuran-7-yl)cyclopropyl)methanamine as a Selective Serotonin 2C Agonist.
- Author
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Cheng J, Giguere PM, Lv W, Roth BL, and Kozikowski AP
- Abstract
A conformationally restricted analog of a selective cyclopropane-bearing serotonin 2C agonist was designed and synthesized. A 2,2-dimethyl-2,3-dihydrobenzofuran scaffold was investigated as a constrained variant of a biologically active isopropyl phenyl ether. Construction of the required dimethyl-2,3-dihydrobenzofuran intermediate began using a procedure that relied on a microwave-assisted alkylation reaction. The synthesis of the designed compound as its HCl salt is reported in a total of 12 steps and 17% overall yield. Biological evaluation revealed the constrained analog to be a selective serotonin 2C agonist with modest potency.
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- 2015
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45. Optimization of 2-phenylcyclopropylmethylamines as selective serotonin 2C receptor agonists and their evaluation as potential antipsychotic agents.
- Author
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Cheng J, Giguère PM, Onajole OK, Lv W, Gaisin A, Gunosewoyo H, Schmerberg CM, Pogorelov VM, Rodriguiz RM, Vistoli G, Wetsel WC, Roth BL, and Kozikowski AP
- Subjects
- Allyl Compounds chemical synthesis, Allyl Compounds chemistry, Amphetamine, Animals, Antipsychotic Agents chemical synthesis, Antipsychotic Agents chemistry, Caco-2 Cells, Cytochrome P-450 Enzyme System metabolism, Dose-Response Relationship, Drug, Humans, Male, Methylamines chemical synthesis, Methylamines chemistry, Mice, Mice, Inbred C57BL, Microsomes, Liver drug effects, Microsomes, Liver enzymology, Microsomes, Liver metabolism, Models, Molecular, Molecular Structure, Serotonin 5-HT2 Receptor Agonists chemical synthesis, Serotonin 5-HT2 Receptor Agonists chemistry, Structure-Activity Relationship, Allyl Compounds pharmacology, Antipsychotic Agents pharmacology, Locomotion drug effects, Methylamines pharmacology, Receptor, Serotonin, 5-HT2C metabolism, Serotonin 5-HT2 Receptor Agonists pharmacology
- Abstract
The discovery of a new series of compounds that are potent, selective 5-HT2C receptor agonists is described herein as we continue our efforts to optimize the 2-phenylcyclopropylmethylamine scaffold. Modifications focused on the alkoxyl substituent present on the aromatic ring led to the identification of improved ligands with better potency at the 5-HT2C receptor and excellent selectivity against the 5-HT2A and 5-HT2B receptors. ADMET studies coupled with a behavioral test using the amphetamine-induced hyperactivity model identified four compounds possessing drug-like profiles and having antipsychotic properties. Compound (+)-16b, which displayed an EC50 of 4.2 nM at 5-HT2C, no activity at 5-HT2B, and an 89-fold selectivity against 5-HT2A, is one of the most potent and selective 5-HT2C agonists reported to date. The likely binding mode of this series of compounds to the 5-HT2C receptor was also investigated in a modeling study, using optimized models incorporating the structures of β2-adrenergic receptor and 5-HT2B receptor.
- Published
- 2015
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46. Biological evaluation of potent triclosan-derived inhibitors of the enoyl-acyl carrier protein reductase InhA in drug-sensitive and drug-resistant strains of Mycobacterium tuberculosis.
- Author
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Stec J, Vilchèze C, Lun S, Perryman AL, Wang X, Freundlich JS, Bishai W, Jacobs WR Jr, and Kozikowski AP
- Subjects
- Antitubercular Agents metabolism, Antitubercular Agents pharmacology, Bacterial Proteins metabolism, Binding Sites, Drug Resistance, Bacterial drug effects, Enzyme Inhibitors metabolism, Enzyme Inhibitors pharmacology, Microbial Sensitivity Tests, Molecular Docking Simulation, Mycobacterium tuberculosis drug effects, Mycolic Acids chemistry, Oxidoreductases metabolism, Protein Structure, Tertiary, Structure-Activity Relationship, Triclosan metabolism, Triclosan pharmacology, Antitubercular Agents chemistry, Bacterial Proteins antagonists & inhibitors, Enzyme Inhibitors chemistry, Mycobacterium tuberculosis enzymology, Oxidoreductases antagonists & inhibitors, Triclosan chemistry
- Abstract
New triclosan (TRC) analogues were evaluated for their activity against the enoyl-acyl carrier protein reductase InhA in Mycobacterium tuberculosis (Mtb). TRC is a well-known inhibitor of InhA, and specific modifications to its positions 5 and 4' afforded 27 derivatives; of these compounds, seven derivatives showed improved potency over that of TRC. These analogues were active against both drug-susceptible and drug-resistant Mtb strains. The most active compound in this series, 4-(n-butyl)-1,2,3-triazolyl TRC derivative 3, had an MIC value of 0.6 μg mL(-1) (1.5 μM) against wild-type Mtb. At a concentration equal to its MIC, this compound inhibited purified InhA by 98 %, and showed an IC50 value of 90 nM. Compound 3 and the 5-methylisoxazole-modified TRC 14 were able to inhibit the biosynthesis of mycolic acids. Furthermore, mc(2) 4914, an Mtb strain overexpressing inhA, was found to be less susceptible to compounds 3 and 14, supporting the notion that InhA is the likely molecular target of the TRC derivatives presented herein., (© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2014
- Full Text
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47. Recent developments in novel antidepressants targeting α4β2-nicotinic acetylcholine receptors.
- Author
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Yu LF, Zhang HK, Caldarone BJ, Eaton JB, Lukas RJ, and Kozikowski AP
- Subjects
- Alkaloids chemistry, Alkaloids pharmacology, Azetidines chemistry, Azetidines pharmacology, Azocines chemistry, Azocines pharmacology, Humans, Ligands, Molecular Targeted Therapy methods, Nicotinic Agonists pharmacology, Nicotinic Antagonists pharmacology, Quinolizines chemistry, Quinolizines pharmacology, Antidepressive Agents pharmacology, Depression drug therapy, Depression metabolism, Receptors, Nicotinic metabolism
- Abstract
Nicotinic acetylcholine receptors (nAChRs) have been investigated for developing drugs that can potentially treat various central nervous system disorders. Considerable evidence supports the hypothesis that modulation of the cholinergic system through activation and/or desensitization/inactivation of nAChR holds promise for the development of new antidepressants. The introductory portion of this Miniperspective discusses the basic pharmacology that underpins the involvement of α4β2-nAChRs in depression, along with the structural features that are essential to ligand recognition by the α4β2-nAChRs. The remainder of this Miniperspective analyzes reported nicotinic ligands in terms of drug design considerations and their potency and selectivity, with a particular focus on compounds exhibiting antidepressant-like effects in preclinical or clinical studies. This Miniperspective aims to provide an in-depth analysis of the potential for using nicotinic ligands in the treatment of depression, which may hold some promise in addressing an unmet clinical need by providing relief from depressive symptoms in refractory patients.
- Published
- 2014
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- View/download PDF
48. Enantiopure Cyclopropane-Bearing Pyridyldiazabicyclo[3.3.0]octanes as Selective α4β2-nAChR Ligands.
- Author
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Onajole OK, Eaton JB, Lukas RJ, Brunner D, Thiede L, Caldarone BJ, and Kozikowski AP
- Abstract
We report the synthesis and characterization of a series of enantiopure 5-cyclopropane-bearing pyridyldiazabicyclo[3.3.0]octanes that display low nanomolar binding affinities and act as functional agonists at α4β2-nicotinic acetylcholine receptor (nAChR) subtype. Structure-activity relationship studies revealed that incorporation of a cyclopropane-containing side chain at the 5-position of the pyridine ring provides ligands with improved subtype selectivity for nAChR β2 subunit-containing nAChR subtypes (β2*-nAChRs) over β4*-nAChRs compared to the parent compound 4. Compound 15 exhibited subnanomolar binding affinity for α4β2- and α4β2*-nAChRs with negligible interaction. Functional assays confirm selectivity for α4β2-nAChRs. Furthermore, using the SmartCube assay system, this ligand showed antidepressant, anxiolytic, and antipsychotic features, while mouse forced-swim assay further confirm the antidepressant-like property of 15.
- Published
- 2014
- Full Text
- View/download PDF
49. The RAD51-stimulatory compound RS-1 can exploit the RAD51 overexpression that exists in cancer cells and tumors.
- Author
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Mason JM, Logan HL, Budke B, Wu M, Pawlowski M, Weichselbaum RR, Kozikowski AP, Bishop DK, and Connell PP
- Subjects
- Animals, Cell Line, Tumor, Cell Survival, Chromatin metabolism, DNA Helicases biosynthesis, DNA Repair drug effects, DNA Repair genetics, DNA Replication drug effects, DNA Replication genetics, DNA-Binding Proteins, HEK293 Cells, Homologous Recombination genetics, Humans, MCF-7 Cells, Mice, Mice, Nude, Neoplasm Transplantation, Neoplasms drug therapy, Nuclear Proteins biosynthesis, Protein Binding, RNA Interference, Rad51 Recombinase biosynthesis, Benzamides pharmacology, DNA Helicases genetics, Neoplasms genetics, Nuclear Proteins genetics, Rad51 Recombinase genetics, Sulfonamides pharmacology
- Abstract
RAD51 is the central protein that catalyzes DNA repair via homologous recombination, a process that ensures genomic stability. RAD51 protein is commonly expressed at high levels in cancer cells relative to their noncancerous precursors. High levels of RAD51 expression can lead to the formation of genotoxic RAD51 protein complexes on undamaged chromatin. We developed a therapeutic approach that exploits this potentially toxic feature of malignancy, using compounds that stimulate the DNA-binding activity of RAD51 to promote cancer cell death. A panel of immortalized cell lines was challenged with the RAD51-stimulatory compound RS-1. Resistance to RS-1 tended to occur in cells with higher levels of RAD54L and RAD54B, which are Swi2/Snf2-related translocases known to dissociate RAD51 filaments from dsDNA. In PC3 prostate cancer cells, RS-1-induced lethality was accompanied by the formation of microscopically visible RAD51 nuclear protein foci occurring in the absence of any DNA-damaging treatment. Treatment with RS-1 promoted significant antitumor responses in a mouse model, providing proof-of-principle for this novel therapeutic strategy., (©2014 American Association for Cancer Research.)
- Published
- 2014
- Full Text
- View/download PDF
50. The potent and selective α4β2*/α6*-nicotinic acetylcholine receptor partial agonist 2-[5-[5-((S)Azetidin-2-ylmethoxy)-3-pyridinyl]-3-isoxazolyl]ethanol demonstrates antidepressive-like behavior in animal models and a favorable ADME-tox profile.
- Author
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Yu LF, Brek Eaton J, Zhang HK, Sabath E, Hanania T, Li GN, van Breemen RB, Whiteaker P, Liu Q, Wu J, Chang YC, Lukas RJ, Brunner D, and Kozikowski AP
- Abstract
Preclinical and clinical studies demonstrated that the inhibition of cholinergic supersensitivity through nicotinic antagonists and partial agonists can be used successfully to treat depressed patients, especially those who are poor responders to selective serotonin reuptake inhibitors (SSRIs). In our effort to develop novel antidepressant drugs, LF-3-88 was identified as a potent nicotinic acetylcholine receptor (nAChR) partial agonist with subnanomolar to nanomolar affinities for β2-containing nAChRs (α2β2, α3β2, α4β2, and α4β2*) and superior selectivity away from α3β4 - (K i > 10(4) nmol/L) and α7-nAChRs (K i > 10(4) nmol/L) as well as 51 other central nervous system (CNS)-related neurotransmitter receptors and transporters. Functional activities at different nAChR subtypes were characterized utilizing (86)Rb(+) ion efflux assays, two-electrode voltage-clamp (TEVC) recording in oocytes, and whole-cell current recording measurements. In mouse models, administration of LF-3-88 resulted in antidepressive-like behavioral signatures 15 min post injection in the SmartCube® test (5 and 10 mg/kg, i.p.; about 45-min session), decreased immobility in the forced swim test (1-3 mg/kg, i.p.; 1-10 mg/kg, p.o.; 30 min pretreatment, 6-min trial), and decreased latency to approach food in the novelty-suppressed feeding test after 29 days chronic administration once daily (5 mg/kg but not 10 mg/kg, p.o.; 15-min trial). In addition, LF-3-88 exhibited a favorable profile in pharmacokinetic/ADME-Tox (absorption, distribution, metabolism, excretion, and toxicity) assays. This compound was also shown to cause no mortality in wild-type Balb/CJ mice when tested at 300 mg/kg. These results further support the potential of potent and selective nicotinic partial agonists for use in the treatment of depression.
- Published
- 2014
- Full Text
- View/download PDF
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