24 results on '"Korobitsyn, Alexei"'
Search Results
2. Updating the approaches to define susceptibility and resistance to anti-tuberculosis agents: implications for diagnosis and treatment
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Georghiou, Sophia B, Rodwell, Timothy C, Korobitsyn, Alexei, Abbadi, Said H, Ajbani, Kanchan, Alffenaar, Jan-Willem, Alland, David, Alvarez, Nataly, Andres, Sönke, Ardizzoni, Elisa, Aubry, Alexandra, Baldan, Rossella, Ballif, Marie, Barilar, Ivan, Böttger, Erik C, Chakravorty, Soumitesh, Claxton, Pauline M, Cirillo, Daniela M, Comas, Iñaki, Coulter, Chris, Denkinger, Claudia M, Derendinger, Brigitta, Desmond, Edward P, de Steenwinkel, Jurriaan EM, Dheda, Keertan, Diacon, Andreas H, Dolinger, David L, Dooley, Kelly E, Egger, Matthias, Ehsani, Soudeh, Farhat, Maha R, Fattorini, Lanfranco, Finci, Iris, Le Ray, Laure Fournier, Furió, Victoria, Groenheit, Ramona, Gumbo, Tawanda, Heysell, Scott K, Hillemann, Doris, Hoffmann, Harald, Hsueh, Po-Ren, Hu, Yi, Huang, Hairong, Hussain, Alamdar, Ismail, Farzana, Izumi, Kiyohiko, Jagielski, Tomasz, Johnson, John L, Kambli, Priti, Kaniga, Koné, Karunaratne, GHR Eranga, Sharma, Meenu Kaushal, Keller, Peter M, Kelly, Ellis C, Kholina, Margarita, Kohli, Mikashmi, Kranzer, Katharina, Laurenson, Ian F, Limberis, Jason, Lin, S-Y Grace, Liu, Yongge, López-Gavín, Alexandre, Lyander, Anna, Machado, Diana, Martinez, Elena, Masood, Faisal, Mitarai, Satoshi, Mvelase, Nomonde R, Niemann, Stefan, Nikolayevskyy, Vladyslav, Maurer, Florian P, Merker, Matthias, Miotto, Paolo, Omar, Shaheed V, Otto-Knapp, Ralf, Palaci, Moisés, Gutiérrez, Juan José Palacios, Peacock, Sharon J, Peloquin, Charles A, Perera, Jennifer, Pierre-Audigier, Catherine, Pholwat, Suporn, Posey, James E, Prammananan, Therdsak, Rigouts, Leen, Robledo, Jaime, Rockwood, Neesha, Rodrigues, Camilla, Salfinger, Max, Schechter, Marcos C, Seifert, Marva, Sengstake, Sarah, Shinnick, Thomas, Shubladze, Natalia, Sintchenko, Vitali, Sirgel, Frederick, Somasundaram, Sulochana, Sterling, Timothy R, Spitaleri, Andrea, and Streicher, Elizabeth
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Medical Microbiology ,Biomedical and Clinical Sciences ,Clinical Sciences ,Infectious Diseases ,Biodefense ,Antimicrobial Resistance ,Prevention ,Rare Diseases ,Emerging Infectious Diseases ,Tuberculosis ,Clinical Research ,Vaccine Related ,Orphan Drug ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Infection ,Good Health and Well Being ,Antitubercular Agents ,Drug Resistance ,Bacterial ,Drug Resistance ,Multiple ,Bacterial ,Humans ,Microbial Sensitivity Tests ,Mycobacterium tuberculosis ,Tuberculosis ,Multidrug-Resistant ,Antimycobacterial Susceptibility Testing Group ,Medical and Health Sciences ,Respiratory System ,Cardiovascular medicine and haematology - Abstract
Inappropriately high breakpoints have resulted in systematic false-susceptible AST results to anti-TB drugs. MIC, PK/PD and clinical outcome data should be combined when setting breakpoints to minimise the emergence and spread of antimicrobial resistance. https://bit.ly/3i43wb6
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- 2022
3. The diagnostic performance of novel skin-based in-vivo tests for tuberculosis infection compared with purified protein derivative tuberculin skin tests and blood-based in vitro interferon-γ release assays: a systematic review and meta-analysis
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Krutikov, Maria, Faust, Lena, Nikolayevskyy, Vladyslav, Hamada, Yohhei, Gupta, Rishi K, Cirillo, Daniela, Matteelli, Alberto, Korobitsyn, Alexei, Denkinger, Claudia M, and Rangaka, Molebogeng X
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- 2022
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4. Recommendation mapping of the World Health Organization's guidelines on tuberculosis: A new approach to digitizing and presenting recommendations
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Hajizadeh, Anisa, Lotfi, Tamara, Falzon, Dennis, Mertz, Dominik, Nieuwlaat, Robby, Gebreselassie, Nebiat, Jaramillo, Ernesto, Korobitsyn, Alexei, Zignol, Matteo, Mirzayev, Fuad, Ismail, Nazir, Brozek, Jan, Loeb, Mark, Piggott, Thomas, Darzi, Andrea, Wang, Qi, Mahmood, Al Subhi, Saroey, Praveen, Matthews, Micayla, Schünemann, Finn, Dietl, Bart, Nowak, Artur, Kulesza, Kuba, Muti-Schünemann, Giovanna E.U., Bognanni, Antonio, Charide, Rana, Akl, Elie A., Kasaeva, Tereza, and Schünemann, Holger J.
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- 2021
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5. Economic evaluation of novel Mycobacterium tuberculosis specific antigen-based skin tests for detection of TB infection: A modelling study
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Goscé, Lara, primary, Allel, Kasim, additional, Hamada, Yohhei, additional, Korobitsyn, Alexei, additional, Ismail, Nazir, additional, Bashir, Saima, additional, Denkinger, Claudia M., additional, Abubakar, Ibrahim, additional, White, Peter J., additional, and Rangaka, Molebogeng X., additional
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- 2023
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6. A systematic review on the safety of Mycobacterium tuberculosis specific antigen-based skin tests for TB infection compared to tuberculin skin tests
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Hamada, Yohhei, primary, Kontsevaya, Irina, additional, Surkova, Elena, additional, Wang, Ting Ting, additional, Wan-Hsin, Liu, additional, Matveev, Aleksandr, additional, Ziganshina, Liliya Eugenevna, additional, Denkinger, Claudia M, additional, Korobitsyn, Alexei, additional, Ismail, Nazir, additional, Abubakar, Ibrahim, additional, and Rangaka, Molebogeng X, additional
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- 2023
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7. Catalogue of mutations in Mycobacterium tuberculosis complex and their association with drug resistance. Second Edition
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United States Agency for International Development, Comas, Iñaki [0000-0001-5504-9408], Ismail, Nazir Ahmed, Nathanson, Carl-Michael, Korobitsyn, Alexei, Zignol, Matteo, Kasaeva, Tereza, Rodwell, Timothy, Miotto, Paolo, Köser, Claudio, Walker, Timothy, Chindelevitch, Leonid, Laurent, Sacha, Farhat, Maha R., Cirillo, Daniela, Comas, Iñaki, Posey, Jamie, Omar, Shaheed V., Rigouts, Leen, Suresh, Anita, Colman, Rebecca, United States Agency for International Development, Comas, Iñaki [0000-0001-5504-9408], Ismail, Nazir Ahmed, Nathanson, Carl-Michael, Korobitsyn, Alexei, Zignol, Matteo, Kasaeva, Tereza, Rodwell, Timothy, Miotto, Paolo, Köser, Claudio, Walker, Timothy, Chindelevitch, Leonid, Laurent, Sacha, Farhat, Maha R., Cirillo, Daniela, Comas, Iñaki, Posey, Jamie, Omar, Shaheed V., Rigouts, Leen, Suresh, Anita, and Colman, Rebecca
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- 2023
8. Assessing the diagnostic performance of new commercial IGRAs for Mycobacterium tuberculosis infection: a systematic review and meta-analysis
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Ortiz-Brizuela, Edgar, primary, Apriani, Lika, additional, Mukherjee, Tania, additional, Lachapelle-Chisholm, Sophie, additional, Miedy, Michele, additional, Lan, Zhiyi, additional, Korobitsyn, Alexei, additional, Ismail, Nazir, additional, and Menzies, Dick, additional
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- 2023
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9. Trade-Offs between Clinical Performance and Test Accessibility in Tuberculosis Diagnosis: A Multi-Country Modelling Approach for Target Product Profile Development
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de Nooy, Alexandra, primary, Ockhuisen, Tom, additional, Ismail, Nazir, additional, Korobitsyn, Alexei, additional, Khan, Shaukat, additional, Ruhwald, Morten, additional, Kohli, Mikashmi, additional, and Nichols, Brooke, additional
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- 2023
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10. Updating the approaches to define susceptibility and resistance to anti-tuberculosis agents: implications for diagnosis and treatment
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Ministerio de Ciencia e Innovación (España), European Research Council, Comas, Iñaki [0000-0001-5504-9408], Antimycobacterial Susceptibility Testing Group, Georghiou, Sophia B., Rodwell, Timothy C., Korobitsyn, Alexei, Abbadi, Said H., Ajbani, Kanchan, Alffenaar, Jan-Willem, Alland, David, Alvarez, Nataly, Andres, Sönke, Ardizzoni, Elisa, Aubry, Alexandra, Baldan, Rossella, Ballif, Marie, Barilar, Ivan, Böttger, Erik C., Chakravorty, Soumitesh, Claxton, Pauline M., Cirillo, Daniela M., Comas, Iñaki, Coulter, Chris, Denkinger, Claudia M., Derendinger, Brigitta, Desmond, Edward P., Steenwinkel, Jurriaan E. M. de, Dheda, Keertan, Diacon, Andreas H., Dolinger, David L., Dooley, Kelly E., Egger, Matthias, Ehsani, Soudeh, Farhat, Maha R., Fattorini, Lanfranco, Finci, Iris, Fournier Le Ray, Laure, Furió, Victoria, Groenheit, Ramona, Gumbo, Tawanda, Heysell, Scott K., Hillemann, Doris, Hoffmann, Harald, Hsueh, Po-Ren, Hu, Yi, Huang, Hairong, Hussain, Alamdar, Ismail, Farzana, Izumi, Kiyohiko, Jagielski, Tomasz, Johnson, John L., Kambli, Priti, Kaniga, Koné, Karunaratne, G. H. R. Eranga, Sharma, Meenu Kaushal, Keller, Peter M., Kelly, Ellis C., Kholina, Margarita, Kohli, Mikashmi, Kranzer, Katharina, Laurenson, Ian F., Limberis, Jason, Lin, S-Y. Grace, Liu, Yongge, López-Gavín, Alexandre, Lyander, Anna, Machado, Diana, Martínez, Elena, Masood, Faisal, Mitarai, Satoshi, Mvelase, Nomonde R., Niemann, Stefan, Nikolayevskyy, Vladyslav, Maurer, Florian P., Merker, Matthias, Miotto, Paolo, Omar, Shaheed V., Otto-Knapp, Ralf, Palaci, Moisés, Palacios Gutiérrez, Juan José, Peacock, Sharon J., Peloquin, Charles A., Perera, Jennifer, Pierre-Audigier, Catherine, Pholwat, Suporn, Posey, James E., Prammananan, Therdsak, Rigouts, Leen, Robledo, Jaime, Rockwood, Neesha, Rodrigues, Camilla, Salfinger, Max, Schechter, Marcos C., Seifert, Marva, Sengstake, Sarah, Shinnick, Thomas, Shubladze, Natalia, Sintchenko, Vitali, Sirgel, Frederick, Somasundaram, Sulochana, Sterling, Timothy R., Spitaleri, Andrea, Streicher, Elizabeth, Supply, Philip, Svensson, Erik, Tagliani, Elisa, Tahseen, Sabira, Takaki, Akiko, Theron, Grant, Torrea, Gabriela, Van Deun, Armand, van Ingen, Jakko, Van Rie, Annelies, van Soolingen, Dick, Vargas Jr, Roger, Venter, Amour, Veziris, Nicolas, Villellas, Cristina, Viveiros, Miguel, Warren, Robin, Wen, Shu'an, Werngren, Jim, Wilkinson, Robert J., Yang, Caie, Yılmaz, F. Ferda, Zhang, Tingting, Zimenkov, Danila, Ismail, Nazir, Köser, Claudio U., Schön, Thomas, Ministerio de Ciencia e Innovación (España), European Research Council, Comas, Iñaki [0000-0001-5504-9408], Antimycobacterial Susceptibility Testing Group, Georghiou, Sophia B., Rodwell, Timothy C., Korobitsyn, Alexei, Abbadi, Said H., Ajbani, Kanchan, Alffenaar, Jan-Willem, Alland, David, Alvarez, Nataly, Andres, Sönke, Ardizzoni, Elisa, Aubry, Alexandra, Baldan, Rossella, Ballif, Marie, Barilar, Ivan, Böttger, Erik C., Chakravorty, Soumitesh, Claxton, Pauline M., Cirillo, Daniela M., Comas, Iñaki, Coulter, Chris, Denkinger, Claudia M., Derendinger, Brigitta, Desmond, Edward P., Steenwinkel, Jurriaan E. M. de, Dheda, Keertan, Diacon, Andreas H., Dolinger, David L., Dooley, Kelly E., Egger, Matthias, Ehsani, Soudeh, Farhat, Maha R., Fattorini, Lanfranco, Finci, Iris, Fournier Le Ray, Laure, Furió, Victoria, Groenheit, Ramona, Gumbo, Tawanda, Heysell, Scott K., Hillemann, Doris, Hoffmann, Harald, Hsueh, Po-Ren, Hu, Yi, Huang, Hairong, Hussain, Alamdar, Ismail, Farzana, Izumi, Kiyohiko, Jagielski, Tomasz, Johnson, John L., Kambli, Priti, Kaniga, Koné, Karunaratne, G. H. R. Eranga, Sharma, Meenu Kaushal, Keller, Peter M., Kelly, Ellis C., Kholina, Margarita, Kohli, Mikashmi, Kranzer, Katharina, Laurenson, Ian F., Limberis, Jason, Lin, S-Y. Grace, Liu, Yongge, López-Gavín, Alexandre, Lyander, Anna, Machado, Diana, Martínez, Elena, Masood, Faisal, Mitarai, Satoshi, Mvelase, Nomonde R., Niemann, Stefan, Nikolayevskyy, Vladyslav, Maurer, Florian P., Merker, Matthias, Miotto, Paolo, Omar, Shaheed V., Otto-Knapp, Ralf, Palaci, Moisés, Palacios Gutiérrez, Juan José, Peacock, Sharon J., Peloquin, Charles A., Perera, Jennifer, Pierre-Audigier, Catherine, Pholwat, Suporn, Posey, James E., Prammananan, Therdsak, Rigouts, Leen, Robledo, Jaime, Rockwood, Neesha, Rodrigues, Camilla, Salfinger, Max, Schechter, Marcos C., Seifert, Marva, Sengstake, Sarah, Shinnick, Thomas, Shubladze, Natalia, Sintchenko, Vitali, Sirgel, Frederick, Somasundaram, Sulochana, Sterling, Timothy R., Spitaleri, Andrea, Streicher, Elizabeth, Supply, Philip, Svensson, Erik, Tagliani, Elisa, Tahseen, Sabira, Takaki, Akiko, Theron, Grant, Torrea, Gabriela, Van Deun, Armand, van Ingen, Jakko, Van Rie, Annelies, van Soolingen, Dick, Vargas Jr, Roger, Venter, Amour, Veziris, Nicolas, Villellas, Cristina, Viveiros, Miguel, Warren, Robin, Wen, Shu'an, Werngren, Jim, Wilkinson, Robert J., Yang, Caie, Yılmaz, F. Ferda, Zhang, Tingting, Zimenkov, Danila, Ismail, Nazir, Köser, Claudio U., and Schön, Thomas
- Abstract
Inappropriately high breakpoints have resulted in systematic false-susceptible AST results to anti-TB drugs. MIC, PK/PD and clinical outcome data should be combined when setting breakpoints to minimise the emergence and spread of antimicrobial resistance.
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- 2022
11. Assessing the Diagnostic Performance of New Commercial Interferon-γ Release Assays for Mycobacterium tuberculosis Infection: A Systematic Review and Meta-Analysis.
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Ortiz-Brizuela, Edgar, Apriani, Lika, Mukherjee, Tania, Lachapelle-Chisholm, Sophie, Miedy, Michele, Lan, Zhiyi, Korobitsyn, Alexei, Ismail, Nazir, and Menzies, Dick
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TUBERCULOSIS diagnosis ,INTERFERON gamma release tests ,MEDICAL databases ,META-analysis ,MEDICAL information storage & retrieval systems ,SYSTEMATIC reviews ,RESPIRATORY disease diagnosis ,PHARMACEUTICAL policy ,INTERFERONS ,DESCRIPTIVE statistics ,TUBERCULIN test ,RESEARCH funding ,BIOLOGICAL assay ,SENSITIVITY & specificity (Statistics) ,MEDLINE ,ROUTINE diagnostic tests ,EVALUATION - Abstract
Background We compared 6 new interferon-γ release assays (IGRAs; hereafter index tests: QFT-Plus, QFT-Plus CLIA, QIAreach, Wantai TB-IGRA, Standard E TB-Feron, and T-SPOT.TB/T-Cell Select) with World Health Organization (WHO)–endorsed tests for tuberculosis infection (hereafter reference tests). Methods Data sources (1 January 2007–18 August 2021) were Medline, Embase, Web of Science, Cochrane Database of Systematic Reviews, and manufacturers' data. Cross-sectional and cohort studies comparing the diagnostic performance of index and reference tests were selected. The primary outcomes of interest were the pooled differences in sensitivity and specificity between index and reference tests. The certainty of evidence (CoE) was summarized using the GRADE approach. Results Eighty-seven studies were included (44 evaluated the QFT-Plus, 4 QFT-Plus CLIA, 3 QIAreach, 26 TB-IGRA, 10 TB-Feron [1 assessing the QFT-Plus], and 1 T-SPOT.TB/T-Cell Select). Compared to the QFT-GIT, QFT Plus's sensitivity was 0.1 percentage points lower (95% confidence interval [CI], −2.8 to 2.6; CoE: moderate), and its specificity 0.9 percentage points lower (95% CI, −1.0 to −.9; CoE: moderate). Compared to QFT-GIT, TB-IGRA's sensitivity was 3.0 percentage points higher (95% CI, −.2 to 6.2; CoE: very low), and its specificity 2.6 percentage points lower (95% CI, −4.2 to −1.0; CoE: low). Agreement between the QFT-Plus CLIA and QIAreach with QFT-Plus was excellent (pooled κ statistics of 0.86 [95% CI,.78 to.94; CoE: low]; and 0.96 [95% CI,.92 to 1.00; CoE: low], respectively). The pooled κ statistic comparing the TB-Feron and the QFT-Plus or QFT-GIT was 0.85 (95% CI,.79 to.92; CoE: low). Conclusions The QFT-Plus and the TB-IGRA have very similar sensitivity and specificity as WHO-approved IGRAs. [ABSTRACT FROM AUTHOR]
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- 2023
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12. A Systematic Review on the Safety of Mycobacterium tuberculosis–Specific Antigen–Based Skin Tests for Tuberculosis Infection Compared With Tuberculin Skin Tests.
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Hamada, Yohhei, Kontsevaya, Irina, Surkova, Elena, Wang, Ting Ting, Wan-Hsin, Liu, Matveev, Aleksandr, Ziganshina, Liliya Eugenevna, Denkinger, Claudia M, Korobitsyn, Alexei, Ismail, Nazir, Abubakar, Ibrahim, and Rangaka, Molebogeng X
- Abstract
Background A systematic review showed that the accuracy of Mycobacterium tuberculosis antigen–based skin tests (TBSTs) for tuberculosis is similar to that of interferon γ release assay, but the safety of TBSTs has not been systematically reviewed. Methods We searched for studies reporting injection site reactions (ISRs) and systemic adverse events associated with TBSTs. We searched Medline, Embase, e-library, the Chinese Biomedical Literature Database, and the China National Knowledge Infrastructure database for studies through 30 July 2021, and the database search was updated until 22 November 2022. Results We identified 7 studies for Cy-Tb (Serum Institute of India), 7 (including 2 found through the updated search) for C-TST (Anhui Zhifei Longcom), and 11 for Diaskintest (Generium). The pooled risk of any injection site reactions (ISRs) due to Cy-Tb (n = 2931; 5 studies) did not differ significantly from that for tuberculin skin tests (TSTs; risk ratio, 1.05 [95% confidence interval,.70–1.58]). More than 95% of ISRs were reported as mild or moderate; common ISRs included pain, itching, and rash. In 1 randomized controlled study, 49 of 153 participants (37.6%) given Cy-Tb experience any systemic adverse event (eg, fever and headache), compared with 56 of 149 participants (37.6%) given TST (risk ratio, 0.85 [95% confidence interval,.6–1.2]). In a randomized controlled study in China (n = 14 579), the frequency of systemic adverse events in participants given C-TST was similar to that for TST, and the frequency of ISRs was similar to or lower than that for TST. Reporting of the safety data on Diaskintest was not standardized, precluding meta-analysis. Conclusion The safety profile of TBSTs appears similar to that of TSTs and is associated with mostly mild ISRs. [ABSTRACT FROM AUTHOR]
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- 2023
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13. Updating the approaches to define susceptibility and resistance to anti-tuberculosis agents: implications for diagnosis and treatment
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Antimycobacterial Susceptibility Testing Group, Georghiou, Sophia B., Rodwell, Timothy C., Korobitsyn, Alexei, Abbadi, Said H., Ajbani, Kanchan, Alffenaar, Jan-Willem, Alland, David, Alvarez, Nataly, Andres, Sönke, Ardizzoni, Elisa, Aubry, Alexandra, Baldan, Rossella, Ballif, Marie, Barilar, Ivan, Böttger, Erik C., Chakravorty, Soumitesh, Claxton, Pauline M., Cirillo, Daniela M., Comas, Iñaki, Coulter, Chris, Denkinger, Claudia M., Derendinger, Brigitta, Desmond, Edward P., Steenwinkel, Jurriaan E. M. de, Dheda, Keertan, Diacon, Andreas H., Dolinger, David L., Dooley, Kelly E., Egger, Matthias, Ehsani, Soudeh, Farhat, Maha R., Fattorini, Lanfranco, Finci, Iris, Fournier Le Ray, Laure, Furió, Victoria, Groenheit, Ramona, Gumbo, Tawanda, Heysell, Scott K., Hillemann, Doris, Hoffmann, Harald, Hsueh, Po-Ren, Hu, Yi, Huang, Hairong, Hussain, Alamdar, Ismail, Farzana, Izumi, Kiyohiko, Jagielski, Tomasz, Johnson, John L., Kambli, Priti, Kaniga, Koné, Karunaratne, G. H. R. Eranga, Sharma, Meenu Kaushal, Keller, Peter M., Kelly, Ellis C., Kholina, Margarita, Kohli, Mikashmi, Kranzer, Katharina, Laurenson, Ian F., Limberis, Jason, Lin, S-Y. Grace, Liu, Yongge, López-Gavín, Alexandre, Lyander, Anna, Machado, Diana, Martínez, Elena, Masood, Faisal, Mitarai, Satoshi, Mvelase, Nomonde R., Niemann, Stefan, Nikolayevskyy, Vladyslav, Maurer, Florian P., Merker, Matthias, Miotto, Paolo, Omar, Shaheed V., Otto-Knapp, Ralf, Palaci, Moisés, Palacios Gutiérrez, Juan José, Peacock, Sharon J., Peloquin, Charles A., Perera, Jennifer, Pierre-Audigier, Catherine, Pholwat, Suporn, Posey, James E., Prammananan, Therdsak, Rigouts, Leen, Robledo, Jaime, Rockwood, Neesha, Rodrigues, Camilla, Salfinger, Max, Schechter, Marcos C., Seifert, Marva, Sengstake, Sarah, Shinnick, Thomas, Shubladze, Natalia, Sintchenko, Vitali, Sirgel, Frederick, Somasundaram, Sulochana, Sterling, Timothy R., Spitaleri, Andrea, Streicher, Elizabeth, Supply, Philip, Svensson, Erik, Tagliani, Elisa, Tahseen, Sabira, Takaki, Akiko, Theron, Grant, Torrea, Gabriela, Van Deun, Armand, van Ingen, Jakko, Van Rie, Annelies, van Soolingen, Dick, Vargas Jr, Roger, Venter, Amour, Veziris, Nicolas, Villellas, Cristina, Viveiros, Miguel, Warren, Robin, Wen, Shu'an, Werngren, Jim, Wilkinson, Robert J., Yang, Caie, Yılmaz, F. Ferda, Zhang, Tingting, Zimenkov, Danila, Ismail, Nazir, Köser, Claudio U., Schön, Thomas, University of Zurich, Antimycobacterial Susceptibility Testing Group, Department of Genetics [Cambridge], University of Cambridge [UK] (CAM), Centre d'Immunologie et des Maladies Infectieuses (CIMI), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), CHU Pitié-Salpêtrière [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), Centre Médical de l'Institut Pasteur (CMIP), Institut Pasteur [Paris] (IP)-Université Paris Cité (UPCité), Institut de médecine et d'épidémiologie appliquée [AP-HP Hôpital Bichat-Claude Bernard] (IMEA), AP-HP - Hôpital Bichat - Claude Bernard [Paris], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Centre d’Infection et d’Immunité de Lille - INSERM U 1019 - UMR 9017 - UMR 8204 (CIIL), Institut Pasteur de Lille, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lille-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille)-Centre National de la Recherche Scientifique (CNRS), As current or former employees or consultants for FIND, the work of R.B. Baldan, I. Comas, C.M. Denkinger, D.L. Dolinger, S.B. Georghiou, C.U. Köser and T.C. Rodwell on the systematic reviews, including this viewpoint, was supported by Unitaid (grant 2019-32-FIND MDR), BMGF (grant OPP1105925), the German Federal Ministry of Education and Research through KfW, the Dutch Ministry of Foreign Affairs, the Australian Department of Foreign Affairs and Trade, and UK aid from the British people. N. Alvarez and J. Robledo are funded by MinCiencias, Colombia (number 221389666216 CT-783-2018). A. Aubry and N. Veziris work at the Centre National de Reference des Mycobactéries, which receives an annual grant from Santé Publique France and have received research grants from Janssen for studies on bedaquiline. P. Claxton and I.F. Laurenson are funded through National Services Scotland. I. Comas was supported by PID2019-104477RB-I00 from the Spanish Science Ministry and by ERC (CoG 101001038). M. Egger is supported by the Swiss National Science Foundation (grant number 320030_153442 and 189498) and the US National Institutes of Health, National Institute of Allergy and Infectious Diseases, the Eunice Kennedy Shriver National Institute of Child Health and Human Development, the National Cancer Institute, the National Institute of Mental Health, the National Institute on Drug Abuse, the National Heart, Lung, and Blood Institute, the National Institute on Alcohol Abuse and Alcoholism, the National Institute of Diabetes and Digestive and Kidney Diseases, the Fogarty International Center, and the National Library of Medicine: Asia-Pacific, U01AI069907, CCASAnet, U01AI069923, Central Africa, U01AI096299, East Africa, U01AI069911, NA-ACCORD, U01AI069918, Southern Africa, U01AI069924, West Africa, U01AI069919. M.R. Farhat is supported by NIH NIAID R01AI155765. S.K. Heysell was funded by NIH NIAID grants R01 AI137080 and U01 AI150508. T. Jagielski was supported by a DAINA grant (number 2017/27/L/NZ6/03279) from the National Science Centre, Poland. J.L. Johnson was supported by contracts NO1-AI95383 and NO1-AI-70022 of the US National Institutes of Health. P.M. Keller was supported by Innosuisse 36198.1 IP-LS. C.U. Köser is a research associate at Wolfson College and visiting scientist at the Department of Genetics, University of Cambridge. The Federal Government of Germany supported C.U. Köser as part of his work for the European Laboratory Initiative, WHO Regional Office for Europe. C.U. Köser was further supported by the Royal Society of Tropical Medicine and Hygiene and the National Institute for Health Research Cambridge Biomedical Research Centre and received an observership by the European Society of Clinical Microbiology and Infectious Diseases to the EUCAST Development Laboratory for Bacteria (Växjö, Sweden), hosted by Gunnar Kahlmeter and Erika Matuschek. D. Machado and M. Viveiros are funded in part by Fundação para a Ciência e a Tecnologia, Portugal (PTDC/BIA-MIC/30692/2017, UID/Multi/04413/2020 and DL57/ CEECIND/0256/2017). S. Niemann is supported by the German Center for Infection Research, Excellenz Cluster Precision Medicine in Chronic Inflammation EXC 2167, Leibniz Science Campus Evolutionary Medicine of the LUNG (EvoLUNG). S.V. Omar has received funding to prepare and provide training for Janssen Pharmaceutica activities. L. Rigouts is supported by the Belgian Directorate General for Development. T.C. Rodwell was additionally funded in part by FIND and NIH NIAD, grants: P30 AI036214 and R21 AI135756. T. Schön is funded by the Swedish Heart and Lung Foundation and the Swedish Research Council. T.R. Sterling has received funding from the US National Institutes of Health and the Centers for Disease Control and Prevention. G. Theron and R. Warren are supported by baseline funding from the South African Medical Research Council. R.J. Wilkinson receives funding from the Wellcome Trust (203135) and from the Francis Crick Institute, which is supported by Cancer Research UK (FC0010218), UKRI (FC0010218) and the Wellcome Trust (FC0010218), Ministerio de Ciencia e Innovación (España), European Research Council, Comas, Iñaki, Comas, Iñaki [0000-0001-5504-9408], Antimycobacterial Susceptibility T, and Wellcome Trust
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[SDV]Life Sciences [q-bio] ,Respiratory System ,Drug Resistance ,Antitubercular Agents ,Infektionsmedicin ,Medical and Health Sciences ,Drug Resistance, Multiple, Bacterial ,Tuberculosis, Multidrug-Resistant ,11 Medical and Health Sciences ,Human Biology & Physiology ,MESH: Microbial Sensitivity Tests ,10179 Institute of Medical Microbiology ,Bacterial ,Multidrug-Resistant ,Infectious Diseases ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Infection ,Life Sciences & Biomedicine ,Multiple ,Model organisms ,Pulmonary and Respiratory Medicine ,Infectious Medicine ,Immunology ,Infectious Disease ,610 Medicine & health ,Microbial Sensitivity Tests ,Vaccine Related ,Rare Diseases ,Clinical Research ,Biodefense ,MESH: Drug Resistance, Bacterial ,Drug Resistance, Bacterial ,Tuberculosis ,Humans ,Science & Technology ,MESH: Humans ,Antimycobacterial Susceptibility Testing Group ,FOS: Clinical medicine ,Prevention ,MESH: Drug Resistance, Multiple, Bacterial ,Mycobacterium tuberculosis ,Eucast ,MESH: Antitubercular Agents ,lnfectious Diseases and Global Health Radboud Institute for Health Sciences [Radboudumc 4] ,Orphan Drug ,Emerging Infectious Diseases ,Good Health and Well Being ,2740 Pulmonary and Respiratory Medicine ,570 Life sciences ,biology ,Human medicine ,Antimicrobial Resistance ,Model - Abstract
11 páginas, 2 figuras, 1 tabla, Inappropriately high breakpoints have resulted in systematic false-susceptible AST results to anti-TB drugs. MIC, PK/PD and clinical outcome data should be combined when setting breakpoints to minimise the emergence and spread of antimicrobial resistance., I. Comas was supported by PID2019-104477RB-I00 from the Spanish Science Ministry and by ERC (CoG 101001038)
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- 2022
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14. Health-systems efficiency in the Russian Federation: tuberculosis control
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Floyd Katherine, Hutubessy Raymond, Samyshkin Yevgeniy, Korobitsyn Alexei, Fedorin Ivan, Volchenkov Gregory, Kazeonny Boris, Coker Richard, Drobniewski Francis, Jakubowiak Wieslaw, Shilova Margarita, and Atun Rifat A
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Tuberculosis, Pulmonary/therapy ,Hospitals, Special/utilization ,Hospital costs ,Hospital bed capacity ,Bed occupancy ,Hospitalization ,Inpatients ,Efficiency ,Organizational ,Health care surveys ,Cross-sectional studies ,Russian Federation ,Public aspects of medicine ,RA1-1270 - Abstract
OBJECTIVE: To conduct a comprehensive assessment of the case-mix of patients admitted to tuberculosis hospitals and the reasons for their admission in four Russian regions: Ivanovo, Orel, Samara and Vladimir. We also sought to quantify the extent to which efficiency could be improved by reducing hospitalization rates and re-profiling hospital beds available in the tuberculosis-control system. METHODS: We used a standard questionnaire to determine how beds were being used and who was using the beds in tuberculosis facilities in four Russian regions. Data were collected to determine how 4306 tuberculosis beds were utilized as well as on the socioeconomic and demographic indicators, clinical parameters and reasons for hospitalization for 3352 patients. FINDINGS: Of the 3352 patients surveyed about 70% were male; the average age was 40; and rates of unemployment, disability and alcohol misuse were high. About one-third of beds were occupied by smear-positive or culture-positive tuberculosis patients; 20% were occupied by tuberculosis patients who were smear-negative and/or culture-negative; 20% were occupied by patients who no longer had tuberculosis; and 20% were unoccupied. If clinical and public health admission criteria were applied then < 50% of admissions would be justified and < 50% of the current number of beds would be required. Up to 85% of admissions and beds were deemed to be necessary when social problems and poor access to outpatient care were considered along with clinical and public health admission criteria. CONCLUSION: Much of the Russian Federation's large tuberculosis hospital infrastructure is unnecessary when clinical and public health criteria are used, but the large hospital infrastructure within the tuberculosis-control system has an important social support function. Improving the efficiency of the system will require the reform of health-system norms and regulations as they relate to resource allocation and clinical care and implementation of lower-cost approaches to case management for patients with social problems. Additionally, closer attention will need to be paid to the management of staff numbers in the tuberculosis system.
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- 2006
15. Catalogue of mutations in Mycobacterium tuberculosis complex and their association with drug resistance
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Ismail, Nazir Ahmed, Nathanson, Carl-Michael, Korobitsyn, Alexei, Zignol, Matteo, Kasaeva, Tereza, Rodwell, Timothy, Miotto, Paolo, Walker, Timothy, Fowler, Philip, Knaggs, Jeff, Iqbal, Zamin, Hunt, Martin, Chindelevitch, Leonid, Farhat, Maha, Cirillo, Daniela, Crook, Derrick, Comas, Iñaki, Posey, Jamie, Omar, Shaheed Vally, Peto, Tim, Walker, Sarah, Suresh, Anita, Uplekar, Swapna, Laurent, Sacha, Colman, Rebecca, United States Agency for International Development, Comas, Iñaki, and Comas, Iñaki [0000-0001-5504-9408]
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96 páginas, figuras y tablas, This work was funded by grants provided by Unitaid and the United States Agency for International Development
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- 2021
16. Catalogue of mutations in Mycobacterium tuberculosis complex and their association with drug resistance
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United States Agency for International Development, Comas, Iñaki [0000-0001-5504-9408], Ismail, Nazir Ahmed, Nathanson, Carl-Michael, Korobitsyn, Alexei, Zignol, Matteo, Kasaeva, Tereza, Rodwell, Timothy, Miotto, Paolo, Walker, Timothy, Fowler, Philip, Knaggs, Jeff, Iqbal, Zamin, Hunt, Martin, Chindelevitch, Leonid, Farhat, Maha R., Cirillo, Daniela, Crook, Derrick, Comas, Iñaki, Posey, Jamie, Omar, Shaheed V., Peto, Tim, Walker, Sarah, Suresh, Anita, Uplekar, Swapna, Laurent, Sacha, Colman, Rebecca, United States Agency for International Development, Comas, Iñaki [0000-0001-5504-9408], Ismail, Nazir Ahmed, Nathanson, Carl-Michael, Korobitsyn, Alexei, Zignol, Matteo, Kasaeva, Tereza, Rodwell, Timothy, Miotto, Paolo, Walker, Timothy, Fowler, Philip, Knaggs, Jeff, Iqbal, Zamin, Hunt, Martin, Chindelevitch, Leonid, Farhat, Maha R., Cirillo, Daniela, Crook, Derrick, Comas, Iñaki, Posey, Jamie, Omar, Shaheed V., Peto, Tim, Walker, Sarah, Suresh, Anita, Uplekar, Swapna, Laurent, Sacha, and Colman, Rebecca
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- 2021
17. WHO consolidated guidelines on tuberculosis Module 4- Treatment Drug-resistant tuberculosis treatment
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Mirzayev, Fuad, Nguyen, Linh, Gegia, Medea, Viney, Kerri, Zignol, Mateo, Kasaeva, Teresa, Falzon, Denis, Jaramillo, Ernesto, Korobitsyn, Alexei, Brands, Annemieke, Verkuijl, Sabine, Baddeley, Annabel, and Laniado-Laborin, Rafael
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- 2020
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18. Framework for the evaluation of new tests for tuberculosis infection
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Hamada, Yohhei, primary, den Boon, Saskia, additional, Cirillo, Daniela Maria, additional, Penn-Nicholson, Adam, additional, Ruhwald, Morten, additional, Menzies, Dick, additional, Oxlade, Olivia, additional, Falzon, Dennis, additional, Kanchar, Avinash, additional, Korobitsyn, Alexei, additional, Zignol, Matteo, additional, Matteelli, Alberto, additional, and Kasaeva, Tereza, additional
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- 2021
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19. Guidance for the Evaluation of Tuberculosis Diagnostics That Meet\ud the World Health Organization (WHO) Target Product Profiles: An\ud Introduction to WHO Process and Study Design Principles
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Denkinger, Claudia M, Schumacher, Samuel G, Gilpin, Christopher, Korobitsyn, Alexei, Wells, William A, Pai, Madhukar, Leeflang, Mariska, Steingart, Karen, Bulterys, Michelle, Schünemann, Holger, Glaziou, Philippe, and Weyer, Karin
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wf_220 ,wf_200 ,wa_530 - Abstract
Existing high-priority target product profiles (TPPs) of the World Health Organization (WHO) establish important needs for tuberculosis (TB) diagnostic development. Building on this earlier work, this guidance series aims to provide study guidance for performing accuracy studies of novel diagnostic products that may meet the 4 high-priority WHO TPPs and thus enable adequate evidence generation to inform a WHO evidence review process. Diagnostic accuracy studies represent a fundamental step in the validation of all tests. Unfortunately, such studies often have limitations in design, execution, and reporting, leading to low certainty of the evidence about true test performance, which can delay or impede policy and scale-up decisions.\ud \ud This introductory paper outlines the following: (1) the purpose of this series of papers on study guidance; (2) WHO evidence needs and process for the development of policy guidelines for new TB diagnostic tests; and (3) study design considerations, ie, general diagnostic study considerations, intended use of test and role in the clinical pathway, choice of population and setting, index-test specific issues, suitable reference standard and comparators, study flow and specimen issues, and finally key issues beyond accuracy that should be considered. The other 4 papers in this series will provide more detailed guidance for each of the 4 WHO high-priority TPPs.\ud \ud By increasing the clarity around the clinical evaluation needs for tests that have the potential to meet the TPP specifications, we hope to support harmonized evidence generation and enable the WHO review process towards meeting the WHO End TB Strategy targets for reducing the incidence and mortality associated with TB.
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- 2019
20. A systematic review of the diagnostic accuracy of artificial intelligence-based computer programs to analyze chest x-rays for pulmonary tuberculosis
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Harris, Miriam, primary, Qi, Amy, additional, Jeagal, Luke, additional, Torabi, Nazi, additional, Menzies, Dick, additional, Korobitsyn, Alexei, additional, Pai, Madhukar, additional, Nathavitharana, Ruvandhi R., additional, and Ahmad Khan, Faiz, additional
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- 2019
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21. The World Health Organization standards for tuberculosis care and management
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Gilpin, Christopher, primary, Korobitsyn, Alexei, additional, Migliori, Giovanni Battista, additional, Raviglione, Mario C., additional, and Weyer, Karin, additional
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- 2018
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22. TB case detection in Tajikistan – analysis of existing obstacles
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Korobitsyn, Alexei, primary, Bobokhojaev, Oktam, additional, Mohr, Thomas, additional, Ismoilova, Jamila, additional, Makhmudova, Mavluda, additional, and Trusov, Alex, additional
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- 2013
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23. Systematic review of the economic impact of novel Mycobacterium tuberculosis specific antigen-based skin tests for detection of TB infection compared with tuberculin skin test and interferon-gamma release assays.
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Goscé L, Allel K, Hamada Y, Surkova E, Kontsevaya I, Wang TT, Liu WH, Matveev A, Ziganshina LE, Korobitsyn A, Ismail N, Bashir S, Denkinger CM, Abubakar I, White PJ, and Rangaka MX
- Abstract
The Purified Protein Derivative tuberculin skin tests (TST) and blood-based Mycobacterium tuberculosis (M.tb) specific interferon-gamma release assays (IGRA) are the currently used tests for identifying individuals with TB infection for preventive treatment. However, challenges around access and implementation have limited their use. Novel M.tb specific skin tests (TBST) such as Diaskintest, ESAT6-CFP10 (C-TST), C-Tb (also known as Cy-Tb), and DPPD may provide accurate and scalable options but evidence synthesis on their economic impact is lacking. We conducted two separate systematic reviews to compare the costs and cost-effectiveness of (1) the novel skin tests TBST (primary), and (2) TST and IGRA tests (secondary), to support WHO guideline development. We searched for articles presenting economic evaluations of the diagnostic tests using a health provider perspective and related to TB infection in humans. We considered papers written in English, Chinese or Russian. In the primary review, eight studies for novel TBST were found. One study in Brazil assessed cost-effectiveness of C-TST and Diaskintest and seven in Russia assessed the Diaskintest, while none evaluated C-Tb or DPPD. The review showed on average, Diaskintest kit costs (in 2021 USD) $1.60 (1.50 - 1.70), while full unit costs were estimated at $5.07. C-TST unit cost was $9.96. The second review found 32 articles on IGRA and/or the TST. These presented an average TST full unit cost of $37.88, and $87.81 for IGRA. Studies' quality for TBST was limited while high-quality studies were found for TST and IGRA tests. In conclusion, there is limited evidence regarding the costs and cost-effectiveness of novel TBST. Conversely, there is substantial evidence for TST and IGRA tests, but most studies were performed in high-income and low-TB burden settings and their cost-effectiveness varied between and within risk groups without clear economic consensus., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Goscé et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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24. Guidance for the Evaluation of Tuberculosis Diagnostics That Meet the World Health Organization (WHO) Target Product Profiles: An Introduction to WHO Process and Study Design Principles.
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Denkinger CM, Schumacher SG, Gilpin C, Korobitsyn A, Wells WA, Pai M, Leeflang M, Steingart KR, Bulterys M, Schünemann H, Glaziou P, and Weyer K
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- Biomarkers analysis, Humans, Mycobacterium tuberculosis pathogenicity, Mycobacterium tuberculosis physiology, Reference Standards, Research Design, Sputum microbiology, Tuberculosis microbiology, World Health Organization, Diagnostic Tests, Routine standards, Disease Notification standards, Mycobacterium tuberculosis isolation & purification, Practice Guidelines as Topic, Specimen Handling standards, Tuberculosis diagnosis
- Abstract
Existing high-priority target product profiles (TPPs) of the World Health Organization (WHO) establish important needs for tuberculosis (TB) diagnostic development. Building on this earlier work, this guidance series aims to provide study guidance for performing accuracy studies of novel diagnostic products that may meet the 4 high-priority WHO TPPs and thus enable adequate evidence generation to inform a WHO evidence review process. Diagnostic accuracy studies represent a fundamental step in the validation of all tests. Unfortunately, such studies often have limitations in design, execution, and reporting, leading to low certainty of the evidence about true test performance, which can delay or impede policy and scale-up decisions. This introductory paper outlines the following: (1) the purpose of this series of papers on study guidance; (2) WHO evidence needs and process for the development of policy guidelines for new TB diagnostic tests; and (3) study design considerations, ie, general diagnostic study considerations, intended use of test and role in the clinical pathway, choice of population and setting, index-test specific issues, suitable reference standard and comparators, study flow and specimen issues, and finally key issues beyond accuracy that should be considered. The other 4 papers in this series will provide more detailed guidance for each of the 4 WHO high-priority TPPs. By increasing the clarity around the clinical evaluation needs for tests that have the potential to meet the TPP specifications, we hope to support harmonized evidence generation and enable the WHO review process towards meeting the WHO End TB Strategy targets for reducing the incidence and mortality associated with TB., (© The Author(s) 2019. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.)
- Published
- 2019
- Full Text
- View/download PDF
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