71 results on '"Konkolewicz D"'
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2. Model based determination of linear gradient quality of ATRP copolymers
- Author
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Steenberge, Paul H. M., Dagmar R. D'hooge, Wang, Y., Zhong, M., Reyniers, Marie-Françoise, Konkolewicz, D., Matyjaszewski, K., and Guy Marin
- Subjects
Technology and Engineering - Published
- 2012
3. Chain transfer to polymer and branching in controlled radical polymerizations of n-butyl acrylate
- Author
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Ahmad, N.M., Charleux, B., Farcet, C., Ferguson, C.J., Gaynor, S.G., Hawkett, B.S., Heatley, F., Klumperman, B., Konkolewicz, D., Lovell, P.A., Matyjaszewski, K., Venkatesh, R., and Chemical Engineering and Chemistry
- Abstract
Chain transfer to polymer (CTP) in conventional free-radical polymerizations (FRPs) and controlled radical polymerizations (ATRP, RAFT and NMP) of n-butyl acrylate (BA) has been investigated using 13C NMR measurements of branching in the poly(n-butyl acrylate) produced. The mol-% branches are reduced significantly in the controlled radical polymerizations as compared to conventional FRPs. Several possible explanations for this observation are discussed critically and all except one refuted. The observations are explained in terms of differences in the concentration of highly reactive short-chain radicals which can be expected to undergo both intra- and inter-molecular CTP at much higher rates than long-chain radicals. In conventional FRP, the distribution of radical concentrations is broad and there always is present a significant proportion of short-chain radicals, whereas in controlled radical polymerizations, the distribution is narrow with only a small proportion of short-chain radicals which diminishes as the living chains grow. Hence, irrespective of the type of control, controlled radical polymerizations give rise to lower levels of branching, when performed under otherwise similar conditions to conventional FRP. Similar observations are expected for other acrylates and monomers that undergo chain transfer to polymer during radical polymerization.
- Published
- 2009
4. Field statistics and correlation functions for stochastically growing waves
- Author
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Cairns, Iver H., primary, Konkolewicz, D. L., additional, and Robinson, P. A., additional
- Published
- 2007
- Full Text
- View/download PDF
5. Controlling carbodiimide-driven reaction networks through the reversible formation of pyridine adducts.
- Author
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Salvia WS, Mantel G, Saha NK, Rajawasam CWH, Konkolewicz D, and Hartley CS
- Abstract
Carbodiimides and pyridines form reversible adducts that slowly deliver carbodiimide "fuels" to out-of-equilibrium reaction networks, slowing activation kinetics and elongating transient state lifetimes. More-nucleophilic pyridines give more adduct under typical conditions. This approach can be used to extend the lifetimes of transient polymer hydrogels.
- Published
- 2024
- Full Text
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6. Vinyl Ether Maleic Acid Polymers: Tunable Polymers for Self-Assembled Lipid Nanodiscs and Environments for Membrane Proteins.
- Author
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Shah MZ, Rotich NC, Okorafor EA, Oestreicher Z, Demidovich G, Eapen J, Henoch Q, Kilbey J, Prempeh G, Bates A, Page RC, Lorigan GA, and Konkolewicz D
- Subjects
- Vinyl Compounds chemistry, Hydrophobic and Hydrophilic Interactions, Polymerization, Maleates chemistry, Lipid Bilayers chemistry, Membrane Proteins chemistry, Polymers chemistry
- Abstract
Native lipid bilayer mimetics, including those that use amphiphilic polymers, are important for the effective study of membrane-bound peptides and proteins. Copolymers of vinyl ether monomers and maleic anhydride were developed with controlled molecular weights and hydrophobicity through reversible addition-fragmentation chain-transfer polymerization. After polymerization, the maleic anhydride units can be hydrolyzed, giving dicarboxylates. The vinyl ether and maleic anhydride copolymerized in a close to alternating manner, giving essentially alternating hydrophilic maleic acid units and hydrophobic vinyl ether units along the backbone after hydrolysis. The vinyl ether monomers and maleic acid polymers self-assembled with lipids, giving vinyl ether maleic acid lipid particles (VEMALPs) with tunable sizes controlled by either the vinyl ether hydrophobicity or the polymer molecular weight. These VEMALPs were able to support membrane-bound proteins and peptides, creating a new class of lipid bilayer mimetics.
- Published
- 2024
- Full Text
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7. Transient Covalent Polymers through Carbodiimide-Driven Assembly.
- Author
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Saha NK, Salvia WS, Konkolewicz D, and Hartley CS
- Abstract
Biochemical systems make use of out-of-equilibrium polymers generated under kinetic control. Inspired by these systems, many abiotic supramolecular polymers driven by chemical fuel reactions have been reported. Conversely, polymers based on transient covalent bonds have received little attention, even though they have the potential to complement supramolecular systems by generating transient structures based on stronger bonds and by offering a straightforward tuning of reaction kinetics. In this study, we show that simple aqueous dicarboxylic acids give poly(anhydrides) when treated with the carbodiimide EDC. Transient covalent polymers with molecular weights exceeding 15,000 are generated which then decompose over the course of hours to weeks. Disassembly kinetics can be controlled using simple substituent effects in the monomer design. The impact of solvent polarity, carbodiimide concentration, temperature, pyridine concentration, and monomer concentration on polymer properties and lifetimes has been investigated. The results reveal substantial control over polymer assembly and disassembly kinetics, highlighting the potential for fine-tuned kinetic control in nonequilibrium polymerization systems., (© 2024 The Author(s). Angewandte Chemie International Edition published by Wiley-VCH GmbH.)
- Published
- 2024
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8. Network Polymer Properties Engineered Through Polymer Backbone Dispersity and Structure.
- Author
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Raji IO, Dodo OJ, Saha NK, Eisenhart M, Miller KM, Whitfield R, Anastasaki A, and Konkolewicz D
- Abstract
Dispersity (Ð or M
w /Mn ) is an important parameter in material design and as such can significantly impact the properties of polymers. Here, polymer networks with independent control over the molecular weight and dispersity of the linear chains that form the material are developed. Using a RAFT polymerization approach, a library of polymers with dispersity ranging from 1.2-1.9 for backbone chain-length (DP) 100, and 1.4-3.1 for backbone chain-length 200 were developed and transformed to networks through post-polymerization crosslinking to form disulfide linkers. The tensile, swelling, and adhesive properties were explored, finding that both at DP 100 and DP 200 the swelling ratio, tensile strength, and extensibility were superior at intermediate dispersity (1.3-1.5 for DP 100 and 1.6-2.1 for DP 200) compared to materials with either substantially higher or lower dispersity. Furthermore, adhesive properties for materials with chains of intermediate dispersity at DP 200 revealed enhanced performance compared to the very low or high dispersity chains., (© 2024 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.)- Published
- 2024
- Full Text
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9. Carbodiimide-Driven Toughening of Interpenetrated Polymer Networks.
- Author
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Rajawasam CWH, Tran C, Sparks JL, Krueger WH, Hartley CS, and Konkolewicz D
- Abstract
Recent work has demonstrated that temporary crosslinks in polymer networks generated by chemical "fuels" afford materials with large, transient changes in their mechanical properties. This can be accomplished in carboxylic-acid-functionalized polymer hydrogels using carbodiimides, which generate anhydride crosslinks with lifetimes on the order of minutes to hours. Here, the impact of the polymer network architecture on the mechanical properties of transiently crosslinked materials was explored. Single networks (SNs) were compared to interpenetrated networks (IPNs). Notably, semi-IPN precursors that give IPNs on treatment with carbodiimide give much higher fracture energies (i.e., resistance to fracture) and superior resistance to compressive strain compared to other network architectures. A precursor semi-IPN material featuring acrylic acid in only the free polymer chains yields, on treatment with carbodiimide, an IPN with a fracture energy of 2400 J/m
2 , a fourfold increase compared to an analogous semi-IPN precursor that yields a SN. This resistance to fracture enables the formation of macroscopic complex cut patterns, even at high strain, underscoring the pivotal role of polymer architecture in mechanical performance., (© 2024 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.)- Published
- 2024
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10. Controlling primary chain dispersity in network polymers: elucidating the effect of dispersity on degradation.
- Author
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Shimizu T, Whitfield R, Jones GR, Raji IO, Konkolewicz D, Truong NP, and Anastasaki A
- Abstract
Although dispersity has been demonstrated to be instrumental in determining many polymer properties, current synthetic strategies predominantly focus on tailoring the dispersity of linear polymers. In contrast, controlling the primary chain dispersity in network polymers is much more challenging, in part due to the complex nature of the reactions, which has limited the exploration of properties and applications. Here, a one-step method to prepare networks with precisely tuned primary chain dispersity is presented. By using an acid-switchable chain transfer agent and a degradable crosslinker in PET-RAFT polymerization, the in situ crosslinking of the propagating polymer chains was achieved in a quantitative manner. The incorporation of a degradable crosslinker, not only enables the accurate quantification of the various primary chain dispersities, post-synthesis, but also allows the investigation and comparison of their respective degradation profiles. Notably, the highest dispersity networks resulted in a 40% increase in degradation time when compared to their lower dispersity analogues, demonstrating that primary chain dispersity has a substantial impact on the network degradation rate. Our experimental findings were further supported by simulations, which emphasized the importance of higher molecular weight polymer chains, found within the high dispersity materials, in extending the lifetime of the network. This methodology presents a new and promising avenue to precisely tune primary chain dispersity within networks and demonstrates that polymer dispersity is an important parameter to consider when designing degradable materials., Competing Interests: The authors declare no conflicts of interest., (This journal is © The Royal Society of Chemistry.)
- Published
- 2023
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11. 3D printable adhesive elastomers with dynamic covalent bond rearrangement.
- Author
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Wanasinghe SV, Johnson B, Revadelo R, Eifert G, Cox A, Beckett J, Osborn T, Thrasher C, Lowe R, and Konkolewicz D
- Abstract
Repairable adhesive elastomers are emerging materials employed in compelling applications such as soft robotics, biosensing, tissue regeneration, and wearable electronics. Facilitating adhesion requires strong interactions, while self-healing requires bond dynamicity. This contrast in desired bond characteristics presents a challenge in the design of healable adhesive elastomers. Furthermore, 3D printability of this novel class of materials has received limited attention, restricting the potential design space of as-built geometries. Here, we report a series of 3D-printable elastomeric materials with self-healing ability and adhesive properties. Repairability is obtained using Thiol-Michael dynamic crosslinkers incorporated into the polymer backbone, while adhesion is facilitated with acrylate monomers. Elastomeric materials with excellent elongation up to 2000%, self-healing stress recovery >95%, and strong adhesion with metallic and polymeric surfaces are demonstrated. Complex functional structures are successfully 3D printed using a commercial digital light processing (DLP) printer. Shape-selective lifting of low surface energy poly(tetrafluoroethylene) objects is achieved using soft robotic actuators with interchangeable 3D-printed adhesive end effectors, wherein tailored contour matching leads to increased adhesion and successful lifting capacity. The demonstrated utility of these adhesive elastomers provides unique capabilities to easily program soft robot functionality.
- Published
- 2023
- Full Text
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12. PET-RAFT Polymerization of Star Polymers with Folded ortho-Phenylene Cores.
- Author
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Bradford KGE, Kirinda VC, Gordon EA, Hartley CS, and Konkolewicz D
- Subjects
- Polymerization, Magnetic Resonance Spectroscopy, Polymers chemistry, Positron-Emission Tomography
- Abstract
ortho-Phenylenes are one of the simplest classes of aromatic foldamers, adopting helical geometries because of aromatic stacking interactions. The folding and misfolding of ortho-phenylenes are slow on the NMR timescale at or below room temperature, allowing detection of folding states using
1 H NMR spectroscopy. Herein, an ortho-phenylene hexamer is coupled with a RAFT chain transfer agent (CTA) on each repeat unit. A variety of acrylic monomers are polymerized onto the CTA-functionalized ortho-phenylene using PET-RAFT to yield functionalized star polymers with ortho-phenylene cores. The steric bulk of the acrylate monomer units as well as the chain length of each arm of the star polymer is varied.1 H NMR spectroscopy shows that the folding of the ortho-phenylenes do not vary, providing a robust helical core for star polymer systems., (© 2023 The Authors. Macromolecular Rapid Communications published by Wiley-VCH GmbH.)- Published
- 2023
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13. Chemically Fueled Reinforcement of Polymer Hydrogels.
- Author
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Rajawasam CWH, Tran C, Weeks M, McCoy KS, Ross-Shannon R, Dodo OJ, Sparks JL, Hartley CS, and Konkolewicz D
- Abstract
Carbodiimide-fueled anhydride bond formation has been used to enhance the mechanical properties of permanently crosslinked polymer networks, giving materials that exhibit transitions from soft gels to covalently reinforced gels, eventually returning to the original soft gels. Temporary changes in mechanical properties result from a transient network of anhydride crosslinks, which eventually dissipate by hydrolysis. Over an order of magnitude increase in the storage modulus is possible through carbodiimide fueling. The time-dependent mechanical properties can be modulated by the concentration of carbodiimide, temperature, and primary chain architecture. Because the materials remain rheological solids, new material functions such as temporally controlled adhesion and rewritable spatial patterns of mechanical properties have been realized.
- Published
- 2023
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14. Polymer modification of SARS-CoV-2 spike protein impacts its ability to bind key receptor.
- Author
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Sharfin Rahman M, De Alwis Watuthanthrige N, Chandrarathne BM, Page RC, and Konkolewicz D
- Abstract
The global spread of SARS-CoV-2 (severe acute respiratory syndrome coronavirus-2) has caused the loss of many human lives and severe economic losses. SARS-CoV-2 mediates its infection in humans via the spike glycoprotein. The receptor binding domain of the SARS-CoV-2 spike protein binds to its cognate receptor, angiotensin converting enzyme-2 (ACE2) to initiate viral entry. In this study, we examine how polymer modification of the spike protein receptor binding domain impacts binding to ACE2. The horseradish peroxidase conjugated receptor binding domain was modified with a range of polymers including hydrophilic N,N -dimethylacrylamide, hydrophobic N -isopropylacrylamide, cationic 3-( N,N -dimethylamino)propylacrylamide, and anionic 2-acrylamido-2-methylpropane sulfonic acid polymers. The effect of polymer chain length was observed using N,N -dimethylacrylamide polymers with degrees of polymerization of 5, 10 and 25. Polymer conjugation of the receptor binding domain significantly reduced the interaction with ACE2 protein, as determined by an enzyme-linked immunosorbent assay. Stability analysis showed that these conjugates remained highly stable even after seven days incubation at physiological temperature. Hence, this study provides a detailed view of the effect specific type of modification using a library of polymers with different functionalities in interrupting RBD-ACE2 interaction., Competing Interests: The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Dominik Konkolewicz reports was provided by National Science Foundation. Richard C Page reports financial support was provided by National Science Foundation. Monica Rahman reports financial support was provided by National Science Foundation. Nethmi De Alwis Watuthanthrige reports was provided by National Science Foundation. Dominik Konkolewicz reports financial support was provided by Miami University. Richard C. Page reports financial support was provided by Miami University., (© 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2023
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15. Oxygen-Enhanced Atom Transfer Radical Polymerization through the Formation of a Copper Superoxido Complex.
- Author
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Parkatzidis K, Truong NP, Whitfield R, Campi CE, Grimm-Lebsanft B, Buchenau S, Rübhausen MA, Harrisson S, Konkolewicz D, Schindler S, and Anastasaki A
- Abstract
In controlled radical polymerization, oxygen is typically regarded as an undesirable component resulting in terminated polymer chains, deactivated catalysts, and subsequent cessation of the polymerization. Here, we report an unusual atom transfer radical polymerization whereby oxygen favors the polymerization by triggering the in situ transformation of CuBr/L to reactive superoxido species at room temperature. Through a superoxido ARGET-ATRP mechanism, an order of magnitude faster polymerization rate and a rapid and complete initiator consumption can be achieved as opposed to when unoxidized CuBr/L was instead employed. Very high end-group fidelity has been demonstrated by mass-spectrometry and one-pot synthesis of block and multiblock copolymers while pushing the reactions to reach near-quantitative conversions in all steps. A high molecular weight polymer could also be targeted (DP
n = 6400) without compromising the control over the molar mass distributions ( Đ < 1.20), even at an extremely low copper concentration (4.5 ppm). The versatility of the technique was demonstrated by the polymerization of various monomers in a controlled fashion. Notably, the efficiency of our methodology is unaffected by the purity of the starting CuBr, and even a brown highly-oxidized 15-year-old CuBr reagent enabled a rapid and controlled polymerization with a final dispersity of 1.07, thus not only reducing associated costs but also omitting the need for rigorous catalyst purification prior to polymerization.- Published
- 2023
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16. Dynamic Bonds: Adaptable Timescales for Responsive Materials.
- Author
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Wanasinghe SV, Dodo OJ, and Konkolewicz D
- Abstract
Dynamic bonds introduce unique properties such as self-healing, recyclability, shape memory, and malleability to polymers. Significant efforts have been made to synthesize a variety of dynamic linkers, creating a diverse library of materials. In addition to the development of new dynamic chemistries, fine-tuning of dynamic bonds has emerged as a technique to modulate dynamic properties. This Review highlights approaches for controlling the timescales of dynamic bonds in polymers. Particularly, eight dynamic bonds are considered, including urea/urethanes, boronic esters, Thiol-Michael exchange, Diels-Alder adducts, transesterification, imine bonds, coordination bonds, and hydrogen bonding. This Review emphasizes how structural modifications and external factors have been used as tools to tune the dynamic character of materials. Finally, this Review proposes strategies for tailoring the timescales of dynamic bonds in polymer materials through both kinetic effects and modulating bond thermodynamics., (© 2022 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.)
- Published
- 2022
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17. Investigating the Impact of Polymer Length, Attachment Site, and Charge on Enzymatic Activity and Stability of Cellulase.
- Author
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Wright TA, Bennett C, Johnson MR, Fischesser H, Chandrarathne BM, Ram N, Maloof E, Tyler A, Upshaw CR, Stewart JM, Page RC, and Konkolewicz D
- Subjects
- Acrylamides, Cellulose, Methacrylates chemistry, Molecular Weight, Cellulase chemistry, Cellulase genetics, Polymers chemistry
- Abstract
The thermophilic cellulase Cel5a from Fervidobacterium nodosum ( Fn Cel5a) was conjugated with neutral, cationic, and anionic polymers of increasing molecular weights. The enzymatic activity toward an anionic soluble cellulose derivative, thermal stability, and functional chemical stability of these bioconjugates were investigated. The results suggest that increasing polymer chain length for polymers compatible with the substrate enhances the positive impact of polymer conjugation on enzymatic activity. Activity enhancements of nearly 100% were observed for bioconjugates with N , N -dimethyl acrylamide (DMAm) and N , N -dimethyl acrylamide-2-( N , N -dimethylamino)ethyl methacrylate (DMAm/DMAEMA) due to proposed polymer-substrate compatibility enabled by potential noncovalent interactions. Double conjugation of two functionally distinct polymers to wild-type and mutated Fn Cel5a using two conjugation methods was achieved. These doubly conjugated bioconjugates exhibited similar thermal stability to the unmodified wild-type enzyme, although enzymatic activity initially gained from conjugation was lost, suggesting that chain length may be a better tool for bioconjugate activity modulation than double conjugation.
- Published
- 2022
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18. PET-RAFT Increases Uniformity in Polymer Networks.
- Author
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Wanasinghe SV, Sun M, Yehl K, Cuthbert J, Matyjaszewski K, and Konkolewicz D
- Subjects
- Energy Transfer, Metalloporphyrins, Iridium, Polymers
- Abstract
Photoinduced electron/energy transfer (PET)-reversible addition-fragmentation chain transfer polymerization (RAFT) and conventional photoinitiated RAFT were used to synthesize polymer networks. In this study, two different metal catalysts, namely, tris[2-phenylpyridinato-C2,N]iridium(III) (Ir(ppy)
3 ) and zinc tetraphenylporphyrin (ZnTPP), were selected to generate two different catalytic pathways, one with Ir(ppy)3 proceeding through an energy-transfer pathway and one with ZnTPP proceeding through an electron-transfer pathway. These PET-RAFT systems were contrasted against a conventional photoinitated RAFT process. Mechanically robust materials were generated. Using bulk swelling ratios and degradable cross-linkers, the homogeneity of the networks was evaluated. Especially at high primary chain length and cross-link density, the PET-RAFT systems generated more uniform networks than those made by conventional RAFT, with the electron transfer-based ZnTPP giving superior results to those of Ir(ppy)3 . The ability to deactivate radicals either by RAFT exchange or reversible coupling in PET RAFT was proposed as the mechanism that gave better control in PET-RAFT systems.- Published
- 2022
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19. Recyclability of Vitrimer Materials: Impact of Catalyst and Processing Conditions.
- Author
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Hubbard AM, Ren Y, Sarvestani A, Konkolewicz D, Picu CR, Roy AK, Varshney V, and Nepal D
- Abstract
With sustainability at the forefront of material research, recyclable polymers, such as vitrimers, have garnered increasing attention since their introduction in 2011. In addition to a traditional glass-transition temperature ( T
g ), vitrimers have a second topology freezing temperature ( Tv ) above which dynamic covalent bonds allow for rapid stress relaxation, self-healing, and shape reprogramming. Herein, we demonstrate the self-healing, shape memory, and shape reconfigurability properties as a function of experimental conditions, aiming toward recyclability and increased useful lifetime of the material. Of interest, we report the influence of processing conditions, which makes the material vulnerable to degradation. We report a decreased crosslink density with increased thermal cycling and compressive stress. Furthermore, we demonstrate that shape reconfigurability and self-healing are enhanced with increasing compressive stress and catalyst concentration, while their performance as a shape memory material remains unchanged. Though increasing the catalyst concentration, temperature, and compressive stress clearly enhances the recovery performance of vitrimers, we must emphasize its trade-off when considering the material degradation reported here. While vitrimers hold great promise as structural materials, it is vital to understand how experimental parameters impact their properties, stability, and reprocessability before vitrimers reach their true potential., Competing Interests: The authors declare no competing financial interest., (© 2022 The Authors. Published by American Chemical Society.)- Published
- 2022
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20. Formation of styrene maleic acid lipid nanoparticles (SMALPs) using SMA thin film on a substrate.
- Author
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Gordon EA, Richardson YB, Shah MZ, Burridge KM, Konkolewicz D, and Lorigan GA
- Subjects
- Liposomes, Membrane Proteins chemistry, Maleates chemistry, Nanoparticles chemistry
- Abstract
Despite the important role of membrane proteins in biological function and physiology, studying them remains challenging because of limited biomimetic systems for the protein to remain in its native membrane environment. Cryo electron microscopy (Cryo-EM) is emerging as a powerful tool for analyzing the structure of membrane proteins. However, Cryo-EM and other membrane protein analyses are better studied in a native lipid bilayer. Although traditional, mimetic systems have disadvantages that limit their use in the study of membrane proteins. As an alternative, styrene-maleic acid copolymers are used to form nanoparticles with POPC:POPG lipids. Traditional characterization of these styrene maleic acid lipid nanoparticles (SMALPs) includes dynamic light scattering (DLS), electron paramagnetic resonance (EPR), nuclear magnetic resonance (NMR), and transmission electron microscopy (TEM). In this study a new method was developed that utilizes SMALPs using a styrene-maleic acid copolymer (SMA) thin film on a TEM grid, acting as a substrate. By directly adding POPC:POPG lipid vesicles to the SMA coated grid SMALPs can be formed, visualized, and characterized by TEM without the need to make them in solution prior to imaging. We envision these functionalized grids could aid in single particle specimen preparation, increasing the efficiency of structural biology and biophysical techniques such as Cryo-EM., (Copyright © 2022. Published by Elsevier Inc.)
- Published
- 2022
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21. Aromatic foldamers as molecular springs in network polymers.
- Author
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Miller KA, Dodo OJ, Devkota GP, Kirinda VC, Bradford KGE, Sparks JL, Hartley CS, and Konkolewicz D
- Subjects
- Magnetic Resonance Spectroscopy, Polymers chemistry
- Abstract
Polymer networks crosslinked with spring-like ortho -phenylene ( o P) foldamers were developed. NMR analysis indicated the o P crosslinkers were well-folded. Polymer networks with o P-based crosslinkers showed enhanced energy dissipation and elasticity compared to divinylbenzene crosslinked networks. The energy dissipation was attributed to the strain-induced reversible unfolding of the o P units. Energy dissipation increased with the number of helical turns in the foldamer.
- Published
- 2022
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22. A comparison of RAFT and ATRP methods for controlled radical polymerization.
- Author
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Truong NP, Jones GR, Bradford KGE, Konkolewicz D, and Anastasaki A
- Abstract
Reversible addition-fragmentation chain-transfer (RAFT) polymerization and atom transfer radical polymerization (ATRP) are the two most common controlled radical polymerization methods. Both methods afford functional polymers with a predefined length, composition, dispersity and end group. Further, RAFT and ATRP tame radicals by reversibly converting active polymeric radicals into dormant chains. However, the mechanisms by which the ATRP and RAFT methods control chain growth are distinct, so each method presents unique opportunities and challenges, depending on the desired application. This Perspective compares RAFT and ATRP by identifying their mechanistic strengths and weaknesses, and their latest synthetic applications., (© 2021. Springer Nature Limited.)
- Published
- 2021
- Full Text
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23. Hydrolytically Stable Maleimide-End-Functionalized Polymers for Site-Specific Protein Conjugation.
- Author
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Wright TA, Rahman MS, Bennett C, Johnson MR, Fischesser H, Ram N, Tyler A, Page RC, and Konkolewicz D
- Subjects
- Hydrolysis, Cysteine chemistry, Click Chemistry, Polymerization, Maleimides chemistry, Polymers chemistry
- Abstract
Site-specific conjugation to cysteines of proteins often uses ester groups to link maleimide or alkene groups to polymers. However, the ester group is susceptible to hydrolysis, potentially losing the benefits gained through bioconjugation. Here, we present a simple conjugation strategy that utilizes the amide bond stability of traditional 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide/N-hydroxysuccinimide coupling while introducing site specificity. Hydrolytically stable maleimide-end-functionalized polymers for site-specific conjugation to free cysteines of proteins were synthesized using reversible addition-fragmentation chain-transfer (RAFT) polymerization. The alpha terminus of the polymers was amidated with a furan-protected aminoethyl maleimide using carbodiimide-based chemistry. Finally, the maleimide was exposed by a retro Diels-Alder reaction to yield the maleimide group, allowing for thiol-maleimide click chemistry for bioconjugation. A thermophilic cellulase from Fervidobacterium nodosum ( Fn Cel5a) was conjugated using various strategies, including random 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC)/N-hydroxysuccinimide (NHS) coupling, site-specific hydroxyethyl maleimide (HEMI) end-functionalized coupling, hydroxyethyl acrylate (HEA) end-functionalized coupling, and amidoethyl maleimide (AEMI) end-functionalized coupling. Only the polymers conjugated by EDC and AEMI remained conjugated a week after attachment. This indicates that hydrolytically stable amide-based maleimides are an important bioconjugation strategy for conjugates that require long-term stability, while esters are better suited for systems that require debonding of polymers over time.
- Published
- 2021
- Full Text
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24. Ubiquitous Nature of Rate Retardation in Reversible Addition-Fragmentation Chain Transfer Polymerization.
- Author
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Bradford KGE, Petit LM, Whitfield R, Anastasaki A, Barner-Kowollik C, and Konkolewicz D
- Abstract
Reversible addition-fragmentation chain transfer (RAFT) polymerization is one of the most powerful reversible deactivation radical polymerization (RDRP) processes. Rate retardation is prevalent in RAFT and occurs when polymerization rates deviate from ideal conventional radical polymerization kinetics. Herein, we explore beyond what was initially thought to be the culprit of rate retardation: dithiobenzoate chain transfer agents (CTA) with more active monomers (MAMs). Remarkably, polymerizations showed that rate retardation occurs in systems encompassing the use of trithiocarbonates and xanthates CTAs with varying monomeric activities. Both the simple slow fragmentation and intermediate radical termination models show that retardation of all these systems can be described by using a single relationship for a variety of monomer reactivity and CTAs, suggesting rate retardation is a universal phenomenon of varying severity, independent of CTA composition and monomeric activity level.
- Published
- 2021
- Full Text
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25. Heat- and Light-Responsive Materials Through Pairing Dynamic Thiol-Michael and Coumarin Chemistry.
- Author
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Chakma P, Wanasinghe SV, Morley CN, Francesconi SC, Saito K, Sparks JL, and Konkolewicz D
- Subjects
- Coumarins, Temperature, Hot Temperature, Sulfhydryl Compounds
- Abstract
Covalent adaptable networks (CANs) based on the thiol-Michael (TM) linkages can be thermal and pH responsive. Here, a new vinyl-sulfone-based thiol-Michael crosslinker is synthesized and incorporated into acrylate-based CANs to achieve stable materials with dynamic properties. Because of the reversible TM linkages, excellent temperature-responsive re-healing and malleability properties are achieved. In addition, for the first time, a photoresponsive coumarin moiety is incorporated with TM-based CANs to introduce light-mediated reconfigureability and postpolymerization crosslinking. Overall, these materials can be on demand dynamic in response to heat and light but can retain mechanical stability at ambient condition., (© 2021 Wiley-VCH GmbH.)
- Published
- 2021
- Full Text
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26. Two-distinct polymer ubiquitin conjugates by photochemical grafting-from.
- Author
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Burridge KM, Parnell RF, Kearns MM, Page RC, and Konkolewicz D
- Abstract
Protein-polymer bioconjugates present a way to make enzymes more efficient and robust for industrial and medicinal applications. While much work has focused on mono-functional conjugates, i.e. conjugates with one type of polymer attached such as poly(ethylene glycol) or poly(N-isopropylacrylamide), there is a practical interest in gaining additional functionality by synthesizing well-defined bifunctional conjugates in a hetero-arm star copolymer architecture with protein as the core. Using ubiquitin as a model protein, a synthetic scheme was developed to attach two different polymers (OEOMA and DMAm) directly to the protein surface, using orthogonal conjugation chemistries and grafting-from by photochemical living radical polymerization techniques. The additional complexity arising from attempts to selectively modify multiple sites led to decreased polymerization performance and indicates that ICAR-ATRP and RAFT are not well-suited to bifunctional bioconjugates applications. Nonetheless, the polymerization conditions preserve the native fold of the ubiquitin and enable production of a hetero-arm star protein-polymer bioconjugate.
- Published
- 2021
- Full Text
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27. 3D-Printed Self-Healing Elastomers for Modular Soft Robotics.
- Author
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Gomez EF, Wanasinghe SV, Flynn AE, Dodo OJ, Sparks JL, Baldwin LA, Tabor CE, Durstock MF, Konkolewicz D, and Thrasher CJ
- Abstract
Advances in materials, designs, and controls are propelling the field of soft robotics at an incredible rate; however, current methods for prototyping soft robots remain cumbersome and struggle to incorporate desirable geometric complexity. Herein, a vat photopolymerizable self-healing elastomer system capable of extreme elongations up to 1000% is presented. The material is formed from a combination of thiol/acrylate mixed chain/step-growth polymerizations and uses a combination of physical processes and dynamic-bond exchange via thioethers to achieve full self-healing capacity over multiple damage/healing cycles. These elastomers can be three dimensional (3D) printed with modular designs capable of healing together to form highly complex and large functional soft robots. Additionally, these materials show reprogrammable resting shapes and compatibility with self-healing liquid metal electronics. Using these capabilities, subcomponents with multiple internal channel systems were printed, healed together, and combined with functional liquid metals to form a high-wattage pneumatic switch and a humanoid-scale soft robotic gripper. The combination of 3D printing and self-healing elastomeric materials allows for facile production of support-free parts with extreme complexity, resulting in a paradigm shift for the construction of modular soft robotics.
- Published
- 2021
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28. PET-RAFT Polymerization: Mechanistic Perspectives for Future Materials.
- Author
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Allegrezza ML and Konkolewicz D
- Subjects
- Catalysis, Polymerization, Polymers, Positron-Emission Tomography
- Abstract
In the past decade, photochemistry has emerged as a growing area in organic and polymer chemistry. Use of light to drive polymerization has advantages by imparting spatial and temporal control over the reaction. Photoinduced electron/energy transfer reversible addition-fragmentation chain transfer polymerization (PET-RAFT) has emerged as an excellent technique for developing well-defined polymers from a variety of functional monomers. However, the mechanism, of electron versus energy transfer is debated in the literature, with conflicting reports on the underlying process. This perspective focuses on the mechanistic aspects of PET-RAFT, in particular, the electron versus energy transfer pathways. The different mechanisms are evaluated, including evidence for one versus the other mechanisms. The current literature has not reached a consensus across all PET-RAFT processes, but rather, each catalytic system has unique characteristics.
- Published
- 2021
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29. Polymer Modification of Lipases, Substrate Interactions, and Potential Inhibition.
- Author
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Rahman MS, Brown J, Murphy R, Carnes S, Carey B, Averick S, Konkolewicz D, and Page RC
- Subjects
- Basidiomycota, Candida, Fungal Proteins, Lipase, Enzymes, Immobilized, Polymers
- Abstract
An industrially important enzyme, Candida antarctica lipase B (CalB), was modified with a range of functional polymers including hydrophilic, hydrophobic, anionic, and cationic character using a "grafting to" approach. We determined the impact of polymer chain length on CalB activity by synthesizing biohybrids of CalB with each polymer at three different chain lengths, using reversible addition-fragmentation chain transfer (RAFT) polymerization. The activity of CalB in both aqueous and aqueous-organic media mixtures was significantly enhanced for acrylamide (Am) and N , N -dimethyl acrylamide (DMAm) conjugates, with activity remaining approximately constant in 25 and 50% ethanol solvent systems. Interestingly, the activity of N , N -dimethylaminopropyl-acrylamide (DMAPA) conjugates increased gradually with increasing organic solvent content in the system. Contrary to other literature reports, our study showed significantly diminished activity for hydrophobic polymer-protein conjugates. Functional thermal stability assays also displayed a considerable enhancement of retained activity of Am, DMAm, and DMAPA conjugates compared to the native CalB enzyme. Thus, this study provides an insight into possible advances in lipase production, which can lead to new improved lipase bioconjugates with increased activity and stability.
- Published
- 2021
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30. Mapping protein-polymer conformations in bioconjugates with atomic precision.
- Author
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Burridge KM, Shurina BA, Kozuszek CT, Parnell RF, Montgomery JS, VanPelt JL, Daman NM, McCarrick RM, Ramelot TA, Konkolewicz D, and Page RC
- Abstract
Rational design of protein-polymer bioconjugates is hindered by limited experimental data and mechanistic understanding on interactions between the two. In this communication, nuclear magnetic resonance (NMR) paramagnetic relaxation enhancement (PRE) reports on distances between paramagnetic spin labels and NMR active nuclei, informing on the conformation of conjugated polymers.
1 H/15 N-heteronuclear single quantum coherence (HSQC) NMR spectra were collected for ubiquitin (Ub) modified with block copolymers incorporating spin labels at different positions along their backbone. The resultant PRE data show that the conjugated polymers have conformations biased towards the nonpolar β-sheet face of Ub, rather than behaving as if in solution. The bioconjugates are stabilized against denaturation by guanidine-hydrochloride, as measured by circular dichroism (CD), and this stabilization is attributed to the interaction between the protein and conjugated polymer., (This journal is © The Royal Society of Chemistry 2020.)- Published
- 2020
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31. Toward Next-Generation Biohybrid Catalyst Design: Influence of Degree of Polymerization on Enzyme Activity.
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Kovaliov M, Wright TA, Cheng B, Mathers RT, Zhang X, Meng D, Szcześniak K, Jenczyk J, Jurga S, Cohen-Karni D, Page RC, Konkolewicz D, and Averick S
- Subjects
- Molecular Dynamics Simulation, Protein Structure, Quaternary, Water chemistry, Biocatalysis, Lipase chemistry, Lipase metabolism, Protein Multimerization
- Abstract
Due to their capacity to conduct complex organic transformations, enzymes find extensive use in medical and industrial settings. Unfortunately, enzymes are limited by their poor stability when exposed to harsh non-native conditions. While a host of methods have been developed to stabilize enzymes in non-native conditions, recent research into the synthesis of polymer-enzyme biohybrids using reversible deactivation radical polymerization approaches has demonstrated the potential of increased enzymatic activity in both native and non-native environments. In this manuscript, we utilize the enzyme lipase, as a model system, to explore the impact that modulation of grafted polymer molecular weight has on enzyme activity in both aqueous and organic media. We studied the properties of these hybrids using both solution-phase enzyme activity methods and coarse-grain modeling to assess the impact of polymer grafting density and grafted polymer molecular weight on enzyme activity to gain a deeper insight into this understudied property of the biohybrid system.
- Published
- 2020
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32. Simple Derivatization of RAFT-Synthesized Styrene-Maleic Anhydride Copolymers for Lipid Disk Formulations.
- Author
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Burridge KM, Harding BD, Sahu ID, Kearns MM, Stowe RB, Dolan MT, Edelmann RE, Dabney-Smith C, Page RC, Konkolewicz D, and Lorigan GA
- Subjects
- Lipid Bilayers, Maleates, Polymers, Polystyrenes, Maleic Anhydrides, Nanoparticles
- Abstract
Styrene-maleic acid copolymers have received significant attention because of their ability to interact with lipid bilayers and form styrene-maleic acid copolymer lipid nanoparticles (SMALPs). However, these SMALPs are limited in their chemical diversity, with only phenyl and carboxylic acid functional groups, resulting in limitations because of sensitivity to low pH and high concentrations of divalent metals. To address this limitation, various nucleophiles were reacted with the anhydride unit of well-defined styrene-maleic anhydride copolymers in order to assess the potential for a new lipid disk nanoparticle-forming species. These styrene-maleic anhydride copolymer derivatives (SMADs) can form styrene-maleic acid derivative lipid nanoparticles (SMADLPs) when they interact with lipid molecules. Polymers were synthesized, purified, characterized by Fourier-transform infrared spectroscopy, gel permeation chromatography, and nuclear magnetic resonance and then used to make disk-like SMADLPs, whose sizes were measured by dynamic light scattering (DLS). The SMADs form lipid nanoparticles, observable by DLS and transmission electron microscopy, and were used to reconstitute a spin-labeled transmembrane protein, KCNE1. The polymer method reported here is facile and scalable and results in functional and robust polymers capable of forming lipid nanodisks that are stable against a wide pH range and 100 mM magnesium.
- Published
- 2020
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33. In-situ Chemiluminescence-Driven Reversible Addition-Fragmentation Chain-Transfer Photopolymerization.
- Author
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De Alwis Watuthanthrige N, Allegrezza ML, Dolan MT, Kloster AJ, Kovaliov M, Averick S, and Konkolewicz D
- Abstract
The power of chemical light generation (chemiluminescence) is used to drive polymerization reactions. A biphasic reaction is developed such that light-generating reactions are confined to the organic phase and photopolymerization occurs in the aqueous phase. Well-defined RAFT-capped polymers are synthesized and the kinetics are shown to be dictated by light generation., (© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2019
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34. Dynamic Covalent Bonds in Polymeric Materials.
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Chakma P and Konkolewicz D
- Abstract
Dynamic covalent bonds (DCBs) have received significant attention over the past decade. These are covalent bonds that are capable of exchanging or switching between several molecules. Particular focus has recently been on utilizing these DCBs in polymeric materials. Introduction of DCBs into a polymer material provides it with powerful properties including self-healing, shape-memory properties, increased toughness, and ability to relax stresses as well as to change from one macromolecular architecture to another. This Minireview summarizes commonly used powerful DCBs formed by simple, often "click" reactions, and highlights the powerful materials that can result. Challenges and potential future developments are also discussed., (© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2019
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35. Structural characterization of styrene-maleic acid copolymer-lipid nanoparticles (SMALPs) using EPR spectroscopy.
- Author
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Bali AP, Sahu ID, Craig AF, Clark EE, Burridge KM, Dolan MT, Dabney-Smith C, Konkolewicz D, and Lorigan GA
- Subjects
- Electron Spin Resonance Spectroscopy, Hydrolysis, Maleates chemical synthesis, Molecular Structure, Particle Size, Polystyrenes chemical synthesis, Lipids chemistry, Maleates chemistry, Nanoparticles chemistry, Polystyrenes chemistry
- Abstract
Spectroscopic studies of membrane proteins (MPs) are challenging due to difficulties in preparing homogenous and functional lipid membrane mimetic systems into which membrane proteins can properly fold and function. It has recently been shown that styrene-maleic acid (SMA) copolymers act as a macromolecular surfactant and therefore facilitate the formation of disk-shaped lipid bilayer nanoparticles (styrene-maleic acid copolymer-lipid nanoparticles (SMALPs)) that retain structural characteristics of native lipid membranes. We have previously reported controlled synthesis of SMA block copolymers using reversible addition-fragmentation chain transfer (RAFT) polymerization, and that alteration of the weight ratio of styrene to maleic acid affects nanoparticle size. RAFT-synthesis offers superior control over SMA polymer architecture compared to conventional radical polymerization techniques used for commercially available SMA. However, the interactions between the lipid bilayer and the solubilized RAFT-synthesized SMA polymer are currently not fully understood. In this study, EPR spectroscopy was used to detect the perturbation on the acyl chain upon introduction of the RAFT-synthesized SMA polymer by attaching PC-based nitroxide spin labels to the 5
th , 12th , and 16th positions along the acyl chain of the lipid bilayer. EPR spectra showed high rigidity at the 12th position compared to the other two regions, displaying similar qualities to commercially available polymers synthesized via conventional methods. In addition, central EPR linewidths and correlation time data were obtained that are consistent with previous findings., (Copyright © 2019 Elsevier B.V. All rights reserved.)- Published
- 2019
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36. Anilinium Salts in Polymer Networks for Materials with Mechanical Stability and Mild Thermally Induced Dynamic Properties.
- Author
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Chakma P, Digby ZA, Shulman MP, Kuhn LR, Morley CN, Sparks JL, and Konkolewicz D
- Abstract
Dynamic nucleophilic exchange of quaternary anilinium salts has been incorporated into rehealable and malleable polymeric materials that can be activated under mild (60 °C) thermal stimulus. The mechanism of dynamic exchange between quaternary anilinium salt and free aniline was assessed in small-molecule model experiments. The dynamic exchange was found to be dissociative in nature, due to the indirect S
N 2 mechanism, where initially the bromide anion attacks the anilinium salt to generate an alkyl bromide which undergoes subsequent attack by a free aniline group. A quaternary anilinium-based cross-linker was synthesized to act as dynamic linkages in the polymer network. Cross-linked polymeric materials showed thermoresponsive rehealing and malleability properties at 60 °C along with being resistant to irreversible creep under ambient conditions. The use of anilinium salts enables dynamic exchange to occur with significantly milder thermal stimulus than other comparable materials, while maintaining mechanical stability.- Published
- 2019
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37. Chemically fueled covalent crosslinking of polymer materials.
- Author
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Zhang B, Jayalath IM, Ke J, Sparks JL, Hartley CS, and Konkolewicz D
- Abstract
Transiently crosslinked dynamic polymer networks are developed, using carbodiimide hydration to link carboxylic acids as anhydrides. From aqueous polymer solutions, non-equilibrium hydrogels are transiently formed, which dissolve upon anhydride hydrolysis. The materials can be refueled using a subsequent injection of carbodiimide. The gels exhibit higher storage moduli compared to transient supramolecular gels as a result of their covalent crosslinks.
- Published
- 2019
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38. Polymer conjugation of proteins as a synthetic post-translational modification to impact their stability and activity.
- Author
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Wright TA, Page RC, and Konkolewicz D
- Abstract
For more than 40 years, protein-polymer conjugates have been widely used for many applications, industrially and biomedically. These bioconjugates have been shown to modulate the activity and stability of various proteins while introducing reusability and new activities that can be used for drug delivery, improve pharmacokinetic ability, and stimuli-responsiveness. Techniques such as RDRP, ROMP and "click" have routinely been utilized for development of well-defined bioconjugate and polymeric materials. Synthesis of bioconjugate materials often take advantage of natural amino acids present within protein and peptide structures for a host of coupling chemistries. Polymer modification may elicit increased or decreased activity, activity retention under harsh conditions, prolonged activity in vivo and in vitro , and introduce stimuli responsiveness. Bioconjugation has resulted to modulated thermal stability, chemical stability, storage stability, half-life and reusability. In this review we aim to provide a brief state of the field, highlight a wide range of behaviors caused by polymer conjugation, and provide areas of future work., Competing Interests: Conflicts of interest Richard C. Page has recently served as an expert in a case associated with Granulocyte colony-stimulating factor.
- Published
- 2019
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39. Characterizing the structure of styrene-maleic acid copolymer-lipid nanoparticles (SMALPs) using RAFT polymerization for membrane protein spectroscopic studies.
- Author
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Harding BD, Dixit G, Burridge KM, Sahu ID, Dabney-Smith C, Edelmann RE, Konkolewicz D, and Lorigan GA
- Subjects
- Dynamic Light Scattering, Microscopy, Electron, Transmission, Polymerization, Lipids chemistry, Maleates chemistry, Membrane Proteins chemistry, Nanoparticles chemistry, Polymers chemistry, Styrene chemistry
- Abstract
Membrane proteins play an important role in maintaining the structure and physiology of an organism. Despite their significance, spectroscopic studies involving membrane proteins remain challenging due to the difficulties in mimicking their native lipid bilayer environment. Membrane mimetic systems such as detergent micelles, liposomes, bicelles, nanodiscs, lipodisqs have improved the solubility and folding properties of the membrane proteins for structural studies, however, each mimetic system suffers from its own limitations. In this study, using three different lipid environments, vesicles were titrated with styrene-maleic acid (StMA) copolymer leading to a homogeneous SMALP system (∼10 nm) at a weight ratio of 1:1.5 (vesicle: StMA solution). A combination of Dynamic Light Scattering (DLS) and Transmission Electron Microscopy (TEM) was used to characterize these SMALPs. We used a controlled synthesis mechanism to synthesize StMA based block copolymers called reversible addition-fragmentation chain transfer polymerization (RAFT) SMALPs. Incorporation of the Voltage Sensor Domain of KCNQ1 (Q1-VSD) into RAFT SMALPs indicates that this is a promising application of this system to study membrane proteins using different biophysical techniques. V165C in Q1-VSD corresponding to the hydrophobic region was incorporated into the SMALP system. Continuous Wave-Electron Paramagnetic Resonance (CW-EPR) line shape analysis showed line shape broadening, exposing a lower rigid component and a faster component of the spin label., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2019
- Full Text
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40. Cationic Hyperbranched Polymers with Biocompatible Shells for siRNA Delivery.
- Author
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Li S, Omi M, Cartieri F, Konkolewicz D, Mao G, Gao H, Averick SE, Mishina Y, and Matyjaszewski K
- Subjects
- Animals, Biocompatible Materials adverse effects, Cell Line, Tumor, Cell Proliferation, Cells, Cultured, Core Binding Factor Alpha 1 Subunit genetics, Core Binding Factor Alpha 1 Subunit metabolism, Humans, Mice, Osteoblasts drug effects, Osteoblasts metabolism, Osteoblasts physiology, Polyethylene Glycols chemistry, Quaternary Ammonium Compounds chemistry, RNA, Small Interfering chemistry, Biocompatible Materials chemistry, Gene Silencing, Gene Transfer Techniques, RNA, Small Interfering genetics
- Abstract
Cationic hyperbranched polymers (HBP) were prepared by self-condensing vinyl polymerization of an atom transfer radical polymerization (ATRP) inimer containing a quaternary ammonium group. Two types of biocompatible shells, poly(oligoethylene glycol) methacrylate (polyOEGMA) and poly(2-(methylsulfinyl) ethyl methacrylate) (polyDMSO), were grafted respectively from HBP core to form core-shell structures with low molecular weight dispersity and high biocompatibility, polyOEGMA-HBP and polyDMSO-HBP. Both of the structures showed low cytotoxicity and good siRNA complexing ability. The efficacy of gene silencing against Runt-related transcription factor 2 ( Runx2) expression and the long-term assessment of mineralized nodule formation in osteoblast cultures were evaluated. The biocompatible core-shell structures were crucial to minimizing undesired cytotoxicity and nonspecific gene suppression. polyDMSO-HBP showed higher efficacy of forming polyplexes than polyOEGMA-HBP due to shell with lower steric hindrance. Overall, the gene silencing efficiency of both core-shell structures was comparable to commercial agent Lipofectamine, indicating long-term potential for gene silencing to treat heterotopic ossification (HO).
- Published
- 2018
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41. Investigating the Mechanism of Horseradish Peroxidase as a RAFT-Initiase.
- Author
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Danielson AP, Van-Kuren DB, Bornstein JP, Kozuszek CT, Berberich JA, Page RC, and Konkolewicz D
- Abstract
A detailed mechanistic and kinetic study of enzymatically initiated RAFT polymerization is performed by combining enzymatic assays and polymerization kinetics analysis. Horseradish peroxidase (HRP) initiated RAFT polymerization of dimethylacrylamide (DMAm) was studied. This polymerization was controlled by 2-(propionic acid)ylethyl trithiocarbonate (PAETC) in the presence of H₂O₂ as a substrate and acetylacetone (ACAC) as a mediator. In general, well controlled polymers with narrow molecular weight distributions and good agreement between theoretical and measured molecular weights are consistently obtained by this method. Kinetic and enzymatic assay analyses show that HRP loading accelerates the reaction, with a critical concentration of ACAC needed to effectively generate polymerization initiating radicals. The PAETC RAFT agent is required to control the reaction, although the RAFT agent also has an inhibitory effect on enzymatic performance and polymerization. Interestingly, although H₂O₂ is the substrate for HRP there is an optimal concentration near 1 mM, under the conditions studies, with higher or lower concentrations leading to lower polymerization rates and poorer enzymatic activity. This is explained through a competition between the H₂O₂ acting as a substrate, but also an inhibitor of HRP at high concentrations.
- Published
- 2018
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42. Photochemistry for Well-Defined Polymers in Aqueous Media: From Fundamentals to Polymer Nanoparticles to Bioconjugates.
- Author
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Burridge KM, Wright TA, Page RC, and Konkolewicz D
- Subjects
- Biopolymers chemistry, Photochemical Processes radiation effects, Photochemistry methods, Polymerization radiation effects, Nanoparticles chemistry, Polymers chemistry, Solvents chemistry, Water chemistry
- Abstract
This review article highlights recent developments in the field of photochemistry and photochemical reversible deactivation radical polymerization applied to aqueous polymerizations. Photochemistry is a topic of significant interest in the fields of organic, polymer, and materials chemistry because it allows challenging reactions to be performed under mild conditions. Aqueous polymerization is of significant interest because water is an environmentally benign solvent, and the use of water enables complex polymer self-assembly and bioconjugation processes to occur. This review focuses on powerful new developments in photochemical aqueous polymerization reactions and their applications to the synthesis of well-defined polymer nano-objects and bioconjugates. It is anticipated that these aqueous photopolymerizations will enable the next generation of self-assembled structures and biohybrid materials to be developed under mild and environmentally friendly conditions., (© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2018
- Full Text
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43. Probing the mechanism of thermally driven thiol-Michael dynamic covalent chemistry.
- Author
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Zhang B, Chakma P, Shulman MP, Ke J, Digby ZA, and Konkolewicz D
- Abstract
The kinetics and mechanism of the thermally activated dynamic covalent exchange of thiol-Michael adducts is investigated. A model system of thiol-Michael adducts between thiophenol and phenylvinylketone derivatives and adducts between 2-mercaptoethanol phenylvinylketone derivatives in N,N-dimethylformamide (DMF) at elevated temperatures is used to probe the underlying exchange mechanism. The kinetic data show negligible free Michael acceptor, which is consistent with the highly efficient thiol-Michael reaction being a "click"-like reaction that significantly favors the adduct form. At elevated temperatures of 90 °C in DMF the thiol-Michael adducts reach equilibrium after 24 h, although equilibration did not occur within 24 h at 60 °C or 75 °C, and negligible exchange occurs under ambient conditions. A kinetic model was developed to describe the dynamic covalent exchange and equilibration. The experimental and simulation kinetic data of dynamic covalent exchange are consistent with the thiol-Michael adducts undergoing a retro-Michael reaction, followed by subsequent addition of a free thiol to the liberated Michael acceptor. Kinetic analysis is consistent with the fragmentation, or retro-Michael reaction, being the rate-determining step in the dynamic covalent exchange. This suggests that the key step in dynamic covalent exchange is not enhanced by addition of free thiol or free Michael acceptor, since the addition reaction is much faster than the retro-Michael reaction. This fundamental study will guide the design of organic compounds, materials, and bioconjugates that utilize the thermally activated dynamic covalent thiol-Michael linkages.
- Published
- 2018
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44. Polymer Conjugation to Enhance Cellulase Activity and Preserve Thermal and Functional Stability.
- Author
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Wright TA, Lucius Dougherty M, Schmitz B, Burridge KM, Makaroff K, Stewart JM, Fischesser HD, Shepherd JT, Berberich JA, Konkolewicz D, and Page RC
- Subjects
- Entropy, Enzyme Stability, Methacrylates chemistry, Models, Molecular, Polymerization, Protein Conformation, Cellulases chemistry, Cellulases metabolism, Polymers chemistry, Temperature
- Abstract
A thermophilic cellulase, FnCel5a, from Fervidobacterium nodosum was conjugated with various functional polymers including cationic, anionic, and strongly and weakly hydrogen bonding polymers. The activity of FnCel5a toward a high-molecular-weight carboxymethyl cellulose substrate was enhanced by polymer conjugation. Activity enhancements of 50% or greater observed for acrylamide and mixed N,N-dimethyl acrylamide-2-(N,N-dimethylamino)ethyl methacrylate polymers, suggesting that the greatest enhancements were caused by polymers capable of noncovalent interactions with the substrate. The conjugates were found to have nearly identical thermodynamic stability to the native enzyme, as assessed by free energy (ΔG), enthalpy (ΔH), and entropy (TΔS) parameters extracted from differential scanning fluorimetry. Polymers tended to confer comparable tolerance to high concentrations of dimethylformamide, with longer polymers typically enabling higher activity relative to shorter polymers. The new FnCel5a conjugates represent an advance in the production of cellulases that maintain activity at high temperatures or in the presence of denaturing organic solvents.
- Published
- 2017
- Full Text
- View/download PDF
45. Rise and Fall: Poly(phenyl vinyl ketone) Photopolymerization and Photodegradation under Visible and UV Radiation.
- Author
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Reeves JA, Allegrezza ML, and Konkolewicz D
- Subjects
- Ketones chemical synthesis, Polymers chemical synthesis, Ketones chemistry, Light, Photolysis radiation effects, Polymerization radiation effects, Polymers chemistry, Polymers radiation effects, Ultraviolet Rays
- Abstract
Vinyl ketone polymers, including phenyl vinyl ketone (PVK), are an important class of polymers due to their ability to degrade upon irradiation with ultraviolet light which makes them useful for a variety of applications. However, traditional radical methods for synthesizing PVK polymers give rise to poor control or are unable to produce block copolymers. This work uses reversible addition-fragmentation chain transfer polymerization (RAFT) and photochemistry to polymerize PVK. When visible blue radiation of 440 ± 10 nm is used as the light source for the photopolymerization, rapid polymerization and well-defined polymers are created. This RAFT method uses PVK as both monomer and radical initiator, exciting the PVK mono-mer by 440 ± 10 nm irradiation to avoid the use of an additional radical initiator. Once the poly-mer is synthesized, it is stable against degradation by blue light (440 ± 10 nm), but upon exposure to ultraviolet (UV) radiation (310 ± 20 nm) significant decrease in molecular weight is observed. The degradation is observed for all poly(PVK) materials synthesized., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2017
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46. 3D printing of an interpenetrating network hydrogel material with tunable viscoelastic properties.
- Author
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Bootsma K, Fitzgerald MM, Free B, Dimbath E, Conjerti J, Reese G, Konkolewicz D, Berberich JA, and Sparks JL
- Subjects
- Elastic Modulus, Humans, Materials Testing, Biocompatible Materials chemistry, Hydrogels chemistry, Printing, Three-Dimensional
- Abstract
Interpenetrating network (IPN) hydrogel materials are recognized for their unique mechanical properties. While IPN elasticity and toughness properties have been explored in previous studies, the factors that impact the time-dependent stress relaxation behavior of IPN materials are not well understood. Time-dependent (i.e. viscoelastic) mechanical behavior is a critical design parameter in the development of materials for a variety of applications, such as medical simulation devices, flexible substrate materials, cellular mechanobiology substrates, or regenerative medicine applications. This study reports a novel technique for 3D printing alginate-polyacrylamide IPN gels with tunable elastic and viscoelastic properties. The viscoelastic stress relaxation behavior of the 3D printed alginate-polyacrylamide IPN hydrogels was influenced most strongly by varying the concentration of the acrylamide cross-linker (MBAA), while the elastic modulus was affected most by varying the concentration of total monomer material. The material properties of our 3D printed IPN constructs were consistent with those reported in the biomechanics literature for soft tissues such as skeletal muscle, cardiac muscle, skin and subcutaneous tissue., (Copyright © 2017 Elsevier Ltd. All rights reserved.)
- Published
- 2017
- Full Text
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47. Effect of Polymer Network Architecture, Enhancing Soft Materials Using Orthogonal Dynamic Bonds in an Interpenetrating Network.
- Author
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Foster EM, Lensmeyer EE, Zhang B, Chakma P, Flum JA, Via JJ, Sparks JL, and Konkolewicz D
- Abstract
Doubly dynamic polymer networks were synthesized with two distinct exchangeable cross-linkers. The first linker is highly dynamic and rapidly exchanging hydrogen bonded 2-ureido-4[1 H ]-pyrimidinone (UPy) and the second is a thermoresponsive furan-maleimide Diels-Alder adduct (FMI). Two network architectures were considered: an interpenetrating network (IPN) where one network is cross-linked with the UPy linker and the other is cross-linked with the FMI linker, and a single network (SN) where both the UPy and FMI linkers are in the same single network. Remarkably, the IPNs were superior to the SNs with the same composition of the UPy and FMI cross-linkers when comparing peak stress, strain at break, fracture toughness, malleability, and self-healing. Both materials studied were stable and creep resistant under ambient conditions.
- Published
- 2017
- Full Text
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48. Polymer Structure and Conformation Alter the Antigenicity of Virus-like Particle-Polymer Conjugates.
- Author
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Lee PW, Isarov SA, Wallat JD, Molugu SK, Shukla S, Sun JE, Zhang J, Zheng Y, Lucius Dougherty M, Konkolewicz D, Stewart PL, Steinmetz NF, Hore MJ, and Pokorski JK
- Subjects
- Animals, Mice, Models, Molecular, Molecular Structure, Neutron Diffraction, Scattering, Small Angle, Acrylates chemistry, Plastics chemistry, Polyethylene Glycols chemistry, Vaccines, Virus-Like Particle chemistry
- Abstract
Covalent conjugation of water-soluble polymers to proteins is critical for evading immune surveillance in the field of biopharmaceuticals. The most common and long-standing polymer modification is the attachment of methoxypoly(ethylene glycol) (mPEG), termed PEGylation, which has led to several clinically approved pharmaceuticals. Recent data indicate that brush-type polymers significantly enhance in vitro and in vivo properties. Herein, the polymer conformation of poly(ethylene glycol) is detailed and compared with those of water-soluble polyacrylate and polynorbornene (PNB) when attached to icosahedral virus-like particles. Small-angle neutron scattering reveals vastly different polymer conformations of the multivalent conjugates. Immune recognition of conjugated particles was evaluated versus PEGylated particles, and PNB conjugation demonstrated the most effective shielding from antibody recognition.
- Published
- 2017
- Full Text
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49. Extraction of Thermodynamic Parameters of Protein Unfolding Using Parallelized Differential Scanning Fluorimetry.
- Author
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Wright TA, Stewart JM, Page RC, and Konkolewicz D
- Abstract
Thermodynamic properties of protein unfolding have been extensively studied; however, the methods used have typically required significant preparation time and high protein concentrations. Here we present a facile, simple, and parallelized differential scanning fluorimetry (DSF) method that enables thermodynamic parameters of protein unfolding to be extracted. This method assumes a two-state, reversible protein unfolding mechanism and provides the capacity to quickly analyze the biophysical mechanisms of changes in protein stability and to more thoroughly characterize the effect of mutations, additives, inhibitors, or pH. We show the utility of the DSF method by analyzing the thermal denaturation of lysozyme, carbonic anhydrase, chymotrypsin, horseradish peroxidase, and cellulase enzymes. Compared with similar biophysical analyses by circular dichroism, DSF allows for determination of thermodynamic parameters of unfolding while providing greater than 24-fold reduction in experimental time. This study opens the door to rapid characterization of protein stability on low concentration protein samples.
- Published
- 2017
- Full Text
- View/download PDF
50. Strategies for Biophysical Characterization of Protein-Polymer Conjugates.
- Author
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Williams C, Dougherty ML, Makaroff K, Stapleton J, Konkolewicz D, Berberich JA, and Page RC
- Subjects
- Calorimetry, Differential Scanning, Protein Stability, Spectrometry, Fluorescence, Thermodynamics, Tryptophan chemistry, Immobilized Proteins chemistry, Polymers chemistry, Proteins chemistry
- Abstract
Protein-polymer conjugates are increasingly viewed as promising avenues to producing industrial enzymes with high activity capable of withstanding potentially harsh reaction conditions, or to designing novel therapeutics with triggered release, controlled masking, or increased resistance to proteolytic degradation. Common among these applications are the desire to improve the stability of protein-polymer conjugates to unfolding by exposure to chemicals or thermal stress. Thus, assays that allow researchers to robustly and easily characterize protein-polymer conjugates by obtaining thermodynamic parameters for folding stand to play an important role in the development of improved protein-polymer conjugates. Herein, we describe two techniques, differential scanning fluorimetry and intrinsic tryptophan fluorescence, used in our laboratories to obtain thermodynamic parameters of unfolding that allow for direct comparison of protein-polymer conjugates and the myriad effects of variations in attachment site, polymer identity, and polymer length. These two experiments, which are easily amenable to parallelization, are presented as high-throughput replacements for more traditionally employed circular dichroism experiments and as complements to functional chemical stability or functional thermal stability experiments. Each assay is presented in a parallelized format that allows for rapid scaling and high-throughput analysis of protein-polymer conjugate libraries. Descriptions of the assays include a discussion of advantages and disadvantages alongside protocol details and approaches to data analysis., (© 2017 Elsevier Inc. All rights reserved.)
- Published
- 2017
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