96 results on '"Kolbasov, D."'
Search Results
2. 9. African swine fever epidemiology, surveillance and control
- Author
-
Viltrop, A., primary, Boinas, F., additional, Depner, K., additional, Jori, F., additional, Kolbasov, D., additional, Laddomada, A., additional, Ståhl, K., additional, and Chenais, E., additional
- Published
- 2021
- Full Text
- View/download PDF
3. Monoclonal Antibodies to the Recombinant Protein VP7 of Bluetongue Virus
- Author
-
Rudenko, N. V., Karatovskaya, A. P., Shepelyakovskaya, A. O., Zamyatina, A. V., Brovko, F. A., Koltsov, A. Yu., Imatdinov, I. R., Imatdinov, A. R., Strijakova, O. M., Mima, K. A., Lyska, V. M., and Kolbasov, D. V.
- Published
- 2019
- Full Text
- View/download PDF
4. Spatial multi-criteria decision analysis for modelling suitable habitats of Ornithodoros soft ticks in the Western Palearctic region
- Author
-
Vial, L., Ducheyne, E., Filatov, S., Gerilovych, A., McVey, D.S., Sindryakova, I., Morgunov, S., Pérez de León, A.A., Kolbasov, D., and De Clercq, E.M.
- Published
- 2018
- Full Text
- View/download PDF
5. Vaginal dysbiosis as a factor contributing to the development of recurrent lower urinary tract infections
- Author
-
Kosova, I. V., primary, Barsegian, V. A., additional, Sinyakova, L. A., additional, Lukianov, I. V., additional, and Kolbasov, D. N., additional
- Published
- 2023
- Full Text
- View/download PDF
6. African swine fever in the North Caucasus region and the Russian Federation in years 2007–2012
- Author
-
Gogin, A., Gerasimov, V., Malogolovkin, A., and Kolbasov, D.
- Published
- 2013
- Full Text
- View/download PDF
7. Attitudes and Beliefs of Pig Farmers and Wild Boar Hunters Towards Reporting of African Swine Fever in Bulgaria, Germany and the Western Part of the Russian Federation
- Author
-
Vergne, T., Guinat, C., Petkova, P., Gogin, A., Kolbasov, D., Blome, S., Molia, S., Pinto Ferreira, J., Wieland, B., Nathues, H., and Pfeiffer, D. U.
- Published
- 2016
- Full Text
- View/download PDF
8. Ecological and genetic mechanisms of development of epidemiologically significant strains of sapronosis causative agents
- Author
-
Adgamov, R. R., Timchenko, N. F., Zaitseva, E. A., Pushkareva, V. I., Kolbasov, D. V., Egorova, I. Yu., Pukhovskaya, N. M., Musatov, Yu. S., Ivanov, L. I., and Ermolaeva, S. A.
- Published
- 2013
- Full Text
- View/download PDF
9. African swine fever epidemiology, surveillance and control
- Author
-
Viltrop, A., Boinas, F., Depner, K., Jori, F., and Kolbasov, D.
- Subjects
epidemic pig disease ,transmission ,genotype II ,wild boar ,ASF - Abstract
The introduction of genotype II African swine fever (ASF) virus (ASFV) into the Caucasus in 2007 resulted in unprecedented disease propagation via slow geographical expansion through wild boar populations, short- and long-distance human-mediated translocations, and incursions into naïve wild boar and domestic pig populations. The disease is now widespread in eastern and central Europe as well as in Asia, including China. The global dimension of the current epidemic shows that all countries need to be prepared for an introduction. In its natural habitat in Africa, ASFV is maintained within an ancient cycle between soft argasid ticks and the common warthog. Once introduced to the domestic pig population, direct and indirect virus transmission occurs with or without involvement of the tick vector in the pig-tick and domestic pig epidemiological cycles respectively. In the domestic pig cycle, human activities involving pigs or pig derived products are the dominating driver of virus transmission. ASF epidemiology in the presence of wild boar and northern European climates has proved to have specific characteristics, described in the wild boar-habitat epidemiological cycle. In this cycle wild boar carcasses and the resulting contamination of the environment play key roles in virus persistence. In both the wild boarhabitat and the domestic pig epidemiological cycle, fully implemented biosecurity is the key for stopping virus transmission and controlling the disease. Positive examples from the Czech Republic and Belgium show that control and eradication of ASF from the wild boar-habitat cycle can be achieved. Both these cases, as well as the example of Sardinia, where ASFV genotype I now seem very close to eradication after more than 40 years presence, further underline the importance of involving, engaging and understanding all stakeholders in the value chains from farm and forest to fork in order to accomplish ASF control and eradication. info:eu-repo/semantics/publishedVersion
- Published
- 2021
10. Efficacy of a trivalent inactivated vaccine against bluetongue in both cattle and small ruminants
- Author
-
Balysheva, V. I., Nesterov, E. A., Lunitsin, A. V., Zhivoderov, S. P., Gorshkova, T. F., Lapteva, O. G., Balyshev, V. M., and Kolbasov, D. V.
- Published
- 2013
- Full Text
- View/download PDF
11. Spatio-temporal kriging analysis to identify the role of wild boar in the spread of African swine fever in the Russian Federation
- Author
-
Iglesias, I., Montes, F., Martínez, M., Perez, A., Gogin, A., Kolbasov, D., and de la Torre, A.
- Published
- 2018
- Full Text
- View/download PDF
12. Urinary Tract Drainage Selection in Case of Pyelonephritis in Pregnant Women
- Author
-
Sinyakova, L. A., primary, Loran, O. B., additional, Kosova, I. V., additional, Kolbasov, D. N., additional, and Tsitsaev, H. B., additional
- Published
- 2020
- Full Text
- View/download PDF
13. Immunohistochemical characteristics of bladder cancer in patients with virus-positive tumors
- Author
-
Kosova, I. V., primary, Loran, O. B., additional, Sinyakova, L. A., additional, Gundorova, L. V., additional, Kosov, V. A., additional, Pogodina, I. E., additional, and Kolbasov, D. M., additional
- Published
- 2018
- Full Text
- View/download PDF
14. Latent viral infection as a factor of unfavorable prognosis of bladder cancer
- Author
-
Kosova, I., primary, Loran, O., additional, Sinyakova, L., additional, Gundorova, L., additional, Kosov, V., additional, Kolbasov, D., additional, and Pogodina, I., additional
- Published
- 2018
- Full Text
- View/download PDF
15. Spatial multi-criteria decision analysis for modelling suitable habitats of Ornithodoros soft ticks in the Western Palearctic region
- Author
-
UCL - SST/ELI/ELIC - Earth & Climate, Vial, L., Ducheyne, E., Filatov, S., Gerilovych, A., McVey, D.S., Sindryakova, I., Morgunov, S., Pérez de León, A.A., Kolbasov, D., De Clercq, Eva M., UCL - SST/ELI/ELIC - Earth & Climate, Vial, L., Ducheyne, E., Filatov, S., Gerilovych, A., McVey, D.S., Sindryakova, I., Morgunov, S., Pérez de León, A.A., Kolbasov, D., and De Clercq, Eva M.
- Abstract
Ticks are economically and medically important ectoparasites due to the injuries inflicted through their bite, and their ability to transmit pathogens to humans, livestock, and wildlife. Whereas hard ticks have been intensively studied, little is known about soft ticks, even though they can also transmit pathogens, including African Swine Fever Virus (ASFV) affecting domestic and wild suids or Borrelia bacteria causing tick-borne relapsing fever (TBRF) in humans. We thus developed a regional model to identify suitable spatial areas for a community of nine Ornithodoros tick species (O. erraticus, O. sonrai, O. alactagalis, O. nereensis, O. tholozani, O. papillipes, O. tartakovskyi, O. asperus, O. verrucosus), which may be of medical and veterinary importance in the Western Palearctic region. Multi-Criteria Decision Analysis was used due to the relative scarcity of high-quality occurrence data. After an in-depth literature review on the ecological requirements of the selected tick community, five climaterelated factors appeared critical for feeding activity and tick development: (i) a spring temperature exceeding 10 °C to induce the end of winter soft tick quiescent period, (ii) a three-months summer temperature above 20 °C to allow tick physiological activities, (iii) annual precipitation ranging from 60 mm to 750 mm and, in very arid areas, (iv) dry seasons interrupted by small rain showers to maintain minimum moisture inside their habitat along the year or (v) residual water provided by perennial rivers near habitats. We deliberately chose not to include biological factors such as host availability or vegetation patterns. A sensitivity analysis was done by performing multiple runs of the model altering the environmental variables, their suitability function, and their attributed weights. To validate the models, we used 355 occurrence data points, complemented by random points within sampled ecoregions. All models indicated suitable areas in the Mediterranean Basin
- Published
- 2018
16. Spatio-temporal kriging analysis to identify the role of wild boar in the spread of African swine fever in the Russian Federation
- Author
-
Iglesias, Irene [0000-0003-3472-6873], Iglesias, Irene, Montes, Fernando, Martínez Avilés, Marta, Pérez, Andrés, Gogin, A., Kolbasov, D., Torre Reoyo, Ana de la, Iglesias, Irene [0000-0003-3472-6873], Iglesias, Irene, Montes, Fernando, Martínez Avilés, Marta, Pérez, Andrés, Gogin, A., Kolbasov, D., and Torre Reoyo, Ana de la
- Abstract
The current situation of African Swine Fever (ASF) epidemic in continental Europe represents a serious economic risk for the European pig industry. It is well known that both domestic pigs and wild boar are involved in the ASF spread, but the exact mechanism of the domestic–wildlife interface remains under research. A spatio-temporal kriging analysis was carried out to estimate the most possible source of infection (domestic pigs or wild boar) for 1,323 notifications of ASF reported in the Russian Federation (RF) from 2013 to 2017. Results for the whole period of study showed that domestic pigs and wild boar were the potential source of infection for 55% and 45% of notifications, respectively. The analysis stratified by year showed fluctuation in this tendency through time. At the early stages of the ASF epidemic in the Southern regions of the RF in 2007–2008 wild boar appears to be the main source of infection, while the following stage of the epidemic in 2009–2012 may be more related to a domestic source of infection. At the latter stage of the epidemic (2013–2017) both, domestic and wild boar, play a similar role as a source of the disease in the newly infected areas but differences by geographical locations can be observed matching with the epidemiology of the disease. This paper provides useful information for better understanding of the ASF mechanism and domestic–wildlife interactions in the RF and describes a new spatio-temporal approach that can be easily applied to other similar animal diseases with a domestic–wildlife interface.
- Published
- 2018
17. Suitable habitats for Palearctic Ornithodoros soft ticks
- Author
-
De Clercq, Eva M., Ducheyne Els, Filatov S, Gerilovych A, McVey S, Sindryakova I, Morgunov S, Perez de Leon A A, Kolbasov D, Vial L, Vanwambeke, Sophie, and UCL - SST/ELI/ELIC - Earth & Climate
- Subjects
parasitic diseases ,Ticks and tick-borne diseases ,Ornithodoros soft ticks ,tick-borne relapsing fever ,African swine fever ,species distribution modeling ,Multi-Criteria Decision Analysis ,knowledge-based modeling - Abstract
Ticks are economically and medically important due to injuries to livestock directly caused by their bite and their ability to transmit pathogens to humans and animals. While hard ticks (Ixodidae) have been extensively studied, the ability of soft ticks (Argasidae) to transmit pathogens to humans and domestic animals remains underestimated (Gray, Estrada-Pena, and Vial 2014). These ticks are nonetheless medically important, especially those belonging to the Ornithodoros genus. In the Palearctic region, five Ornithodoros tick species are considered able to transmit borreliae that cause Tick-Borne Relapsing Fever (TBRF) in humans, with many ocular, encephalitic, arthritic and pregnancy complications (Rebaudet and Parola 2006). The detection of human TBRF cases caused by Borrelia hispanica between 2002 and 2012 in Spain confirmed that the risk of human contamination through soft tick bites in Europe is real (Croche Santander et al. 2015). In the same region, the Iberian tick species O. erraticus was confirmed as a competent vector and natural reservoir for the virus of African Swine Fever (ASF) (Boinas et al. 2011). Knowing the spatial distribution of ticks is essential to assess the risk for pathogen transmission by ticks, so we set out to map suitable habitats for Ornithodoros ticks. In the Palearctic, presence data for Ornithodoros ticks are scarce and largely historical, and absence data are mostly unavailable (Vial 2009). Due to the relative scarcity of high-quality occurrence data, a GIS-based Multi-Criteria Decision Analysis was chosen to describe the range of environmental conditions enabling ticks to survive, grow and reproduce. Based on ecological knowledge on Palearctic Ornithodoros ticks distilled from an in-depth literature review, five criteria were identified. Two criteria were linked to temperatures allowing feeding activity and tick development. The three other criteria were related to the moisture availability for tick survival and development, either from precipitation, ambient humidity or other environmental factors that may provide sufficient moisture in arid zones. In order to incorporate uncertainty, a sensitivity analysis was done by performing different runs of the model and varying the environmental variables describing the respective criteria, the suitability response curves for each of the variables and the weights attributed to the different criteria for each run. Only in the final step, the available presence/absence data were used to validate the results. All models indicated similar trends. Several highly suitable areas were identified along the southern frontier between Portugal and Spain as well as the eastern coast of Spain from Catalonia to Andalusia. Also highlighted were the coastal areas in Sardinia, Sicilia and eastern Italy, as well as eastern Greece and western Turkey. To the east, the estimated distribution extended to the Ukrainian and south-west Russian region above the Black Sea. The models were based on climate variables and did not aim to assess local heterogeneity. Nonetheless, this remains one of the rare examples where a knowledge-based approach was used to produce distribution maps for ticks. This approach compensated both for the scarcity of the presence data and the fuzzy nature of the knowledge available on the ecology of these Ornithodoros tick species. The high values of the accuracy measures, as well as major congruence between the different models for predicting suitable and highly suitable areas, inspired confidence in this methodology and the resulting suitability maps. This makes it a very useful tool to target the surveillance of Ornithodoros ticks and assess the risk for Tick Borne Relapsing Fever throughout Europe.
- Published
- 2017
18. Identification and characterization of lumpy skin disease virus isolated from cattle in the Republic of North Ossetia-Alania in 2015
- Author
-
Salnikov, N., primary, Usadov, T., additional, Kolcov, A., additional, Zhivoderov, S., additional, Morgunov, Y., additional, Gerasimov, V., additional, Gogin, A., additional, Titov, I., additional, Yurkov, S., additional, Malogolovkin, A., additional, Kolbasov, D., additional, and Lunitsyn, A., additional
- Published
- 2018
- Full Text
- View/download PDF
19. Suitable habitats for Palearctic Ornithodoros soft ticks
- Author
-
UCL - SST/ELI/ELIC - Earth & Climate, De Clercq, Eva M., Ducheyne Els, Filatov S, Gerilovych A, McVey S, Sindryakova I, Morgunov S, Perez de Leon A A, Kolbasov D, Vial L, Vanwambeke, Sophie, UCL - SST/ELI/ELIC - Earth & Climate, De Clercq, Eva M., Ducheyne Els, Filatov S, Gerilovych A, McVey S, Sindryakova I, Morgunov S, Perez de Leon A A, Kolbasov D, Vial L, and Vanwambeke, Sophie
- Abstract
Ticks are economically and medically important due to injuries to livestock directly caused by their bite and their ability to transmit pathogens to humans and animals. While hard ticks (Ixodidae) have been extensively studied, the ability of soft ticks (Argasidae) to transmit pathogens to humans and domestic animals remains underestimated (Gray, Estrada-Pena, and Vial 2014). These ticks are nonetheless medically important, especially those belonging to the Ornithodoros genus. In the Palearctic region, five Ornithodoros tick species are considered able to transmit borreliae that cause Tick-Borne Relapsing Fever (TBRF) in humans, with many ocular, encephalitic, arthritic and pregnancy complications (Rebaudet and Parola 2006). The detection of human TBRF cases caused by Borrelia hispanica between 2002 and 2012 in Spain confirmed that the risk of human contamination through soft tick bites in Europe is real (Croche Santander et al. 2015). In the same region, the Iberian tick species O. erraticus was confirmed as a competent vector and natural reservoir for the virus of African Swine Fever (ASF) (Boinas et al. 2011). Knowing the spatial distribution of ticks is essential to assess the risk for pathogen transmission by ticks, so we set out to map suitable habitats for Ornithodoros ticks. In the Palearctic, presence data for Ornithodoros ticks are scarce and largely historical, and absence data are mostly unavailable (Vial 2009). Due to the relative scarcity of high-quality occurrence data, a GIS-based Multi-Criteria Decision Analysis was chosen to describe the range of environmental conditions enabling ticks to survive, grow and reproduce. Based on ecological knowledge on Palearctic Ornithodoros ticks distilled from an in-depth literature review, five criteria were identified. Two criteria were linked to temperatures allowing feeding activity and tick development. The three other criteria were related to the moisture availability for tick survival and development, either
- Published
- 2017
20. BIOLOGICAL PROPERTIES AND MOLECULAR-GENETIC CHARACTERISTICS OF BACILLUS ANTHRACIS STRAINS, ISOLATED DURING THE OUTBREAK OF ANTHRAX IN THE YAMALO-NENETS AUTONOMOUS DISTRICT IN 2016
- Author
-
Kulichenko, A. N., primary, Eremenko, E. I., additional, Ryazanova, A. G., additional, Aksenova, L. Yu., additional, Kovalev, D. A., additional, Pisarenko, S. V., additional, Varfolomeeva, N. G., additional, Zhirov, A. M., additional, Volynkina, А. S., additional, Buravtseva, N. P., additional, Golovinskaya, T. M., additional, Koteneva, E. A., additional, Tsygankova, O. I., additional, Dyatlov, I. A., additional, Timofeev, V. S., additional, Bogun, A. G., additional, Bakhteeva, I. V., additional, Kislichkina, A. A., additional, Mironova, R. I., additional, Titareva, G. M., additional, Skryabin, Yu. P., additional, Selyaninov, Yu. O., additional, Egorova, I. Yu., additional, and Kolbasov, D. V., additional
- Published
- 2017
- Full Text
- View/download PDF
21. Attitudes and beliefs of pig farmers and wild boar hunters towards reporting of African swine fever in Bulgaria, Germany and the Western Part of the Russian Federation
- Author
-
Vergne, Timothée, Guinat, Claire, Petkova, P., Gogin, A., Kolbasov, D., Blome, S., Molia, Sophie, Pinto Ferreira, J., Wieland, Barbara, Nathues, H., Pfeiffer, Dirk, Vergne, Timothée, Guinat, Claire, Petkova, P., Gogin, A., Kolbasov, D., Blome, S., Molia, Sophie, Pinto Ferreira, J., Wieland, Barbara, Nathues, H., and Pfeiffer, Dirk
- Abstract
This study investigated the attitudes and beliefs of pig farmers and hunters in Germany, Bulgaria and the western part of the Russian Federation towards reporting suspected cases of African swine fever (ASF). Data were collected using a web-based questionnaire survey targeting pig farmers and hunters in these three study areas. Separate multivariable logistic regression models identified key variables associated with each of the three binary outcome variables whether or not farmers would immediately report suspected cases of ASF, whether or not hunters would submit samples from hunted wild boar for diagnostic testing and whether or not hunters would report wild boar carcasses. The results showed that farmers who would not immediately report suspected cases of ASF are more likely to believe that their reputation in the local community would be adversely affected if they were to report it, that they can control the outbreak themselves without the involvement of veterinary services and that laboratory confirmation would take too long. The modelling also indicated that hunters who did not usually submit samples of their harvested wild boar for ASF diagnosis, and hunters who did not report wild boar carcasses are more likely to justify their behaviour through a lack of awareness of the possibility of reporting. These findings emphasize the need to develop more effective communication strategies targeted at pig farmers and hunters about the disease, its epidemiology, consequences and control methods, to increase the likelihood of early reporting, especially in the Russian Federation where the virus circulates.
- Published
- 2016
22. Reproductive ratio for the local spread of African swine fever in wild boars in the Russian Federation
- Author
-
Iglesias, Irene [0000-0003-3472-6873], Iglesias, Irene, Muñoz, M. J., Montes, Fernando, Pérez, Andrés, Gogin, A., Kolbasov, D., Torre Reoyo, Ana de la, Iglesias, Irene [0000-0003-3472-6873], Iglesias, Irene, Muñoz, M. J., Montes, Fernando, Pérez, Andrés, Gogin, A., Kolbasov, D., and Torre Reoyo, Ana de la
- Abstract
African swine fever (ASF) has caused the swine industry of the Russian Federation substantial economic losses over the last 7 years, and the disease spread from there to a number of neighbouring countries. Wild boar has been involved in the spread of the disease both at local and at transboundary levels. Understanding ASF dynamics in wild boars is prerequisite to preventing the spread and to designing and applying effective surveillance and control plans. The reproductive ratio (R0) is an epidemiological indicator commonly used to quantify the extent of disease spread. Here, it was estimated in nine spatio-temporal clusters of ASF in wild boar cases in the Russian Federation (2007–2013). Clusters were defined by exploring the maximum distance of association of ASF cases using K Ripley analysis and spatio-temporal scan statistics. A maximum spatial association of 133 km in wild boar cases was identified which is within de the conventional radius of surveillance zone (100–150 km). The mean range value of R0 = 1.58 (1.13–3.77) was lower compared to values previously estimated for ASF transmission within farms but similar to early estimates between farm (R0 = 2–3), in domestic pigs using notification data in the Russian Federation. Results obtained provide quantitative knowledge on the epidemiology of ASF in wild boars in the Russian Federation. They identify the ASF transmission rate value in affected natural wild populations, for the first time, which could provide basis for modelling ASF transmission and suggest that current surveillance radius should be reviewed to make surveillance in wild nature more targeted and effective. © 2015 Blackwell Verlag GmbH
- Published
- 2016
23. African swine fever virus serotype-specific proteins are significant protective antigens for African swine fever
- Author
-
Burmakina, G., primary, Malogolovkin, A., additional, Tulman, E. R., additional, Zsak, L., additional, Delhon, G., additional, Diel, D. G., additional, Shobogorov, N. M., additional, Morgunov, Yu. P., additional, Morgunov, S. Yu., additional, Kutish, G. F., additional, Kolbasov, D., additional, and Rock, D. L., additional
- Published
- 2016
- Full Text
- View/download PDF
24. 793 Relationship of CMV infection with transitional cell carcinoma of bladder
- Author
-
Kosova, I., primary, Loran, O, additional, Sinyakova, L, additional, Kolbasov, D, additional, Kosov, V, additional, Gundorova, L, additional, and Kononkov, I., additional
- Published
- 2016
- Full Text
- View/download PDF
25. 943 - Latent viral infection as a factor of unfavorable prognosis of bladder cancer
- Author
-
Kosova, I., Loran, O., Sinyakova, L., Gundorova, L., Kosov, V., Kolbasov, D., and Pogodina, I.
- Published
- 2018
- Full Text
- View/download PDF
26. African swine fever virus CD2v and C-type lectin gene loci mediate serological specificity
- Author
-
Malogolovkin, A., primary, Burmakina, G., additional, Tulman, E. R., additional, Delhon, G., additional, Diel, D. G., additional, Salnikov, N., additional, Kutish, G. F., additional, Kolbasov, D., additional, and Rock, D. L., additional
- Published
- 2015
- Full Text
- View/download PDF
27. Reproductive Ratio for the Local Spread of African Swine Fever in Wild Boars in the Russian Federation
- Author
-
Iglesias, I., primary, Muñoz, M. J., additional, Montes, F., additional, Perez, A., additional, Gogin, A., additional, Kolbasov, D., additional, and de la Torre, A., additional
- Published
- 2015
- Full Text
- View/download PDF
28. Attitudes and Beliefs of Pig Farmers and Wild Boar Hunters Towards Reporting of African Swine Fever in Bulgaria, Germany and the Western Part of the Russian Federation
- Author
-
Vergne, T., primary, Guinat, C., additional, Petkova, P., additional, Gogin, A., additional, Kolbasov, D., additional, Blome, S., additional, Molia, S., additional, Pinto Ferreira, J., additional, Wieland, B., additional, Nathues, H., additional, and Pfeiffer, D. U., additional
- Published
- 2014
- Full Text
- View/download PDF
29. Molecular characterization of African swine fever virus isolates originating from outbreaks in the Russian Federation between 2007 and 2011
- Author
-
Gallardo, Carmina [0000-0003-3293-306X], Malogolovkin, Alexander, Yelsukova, A., Gallardo, Carmina, Tsybanov, S., Kolbasov, D., Gallardo, Carmina [0000-0003-3293-306X], Malogolovkin, Alexander, Yelsukova, A., Gallardo, Carmina, Tsybanov, S., and Kolbasov, D.
- Abstract
African swine fever is one of the most important viral diseases of pigs and which caused significant economic damage on the pig production worldwide. Nowadays, it is still present on the African continent, in Transcaucasus countries (TCC), on Island of Sardinia and in Russia. Outbreaks of the disease have been reported in Russia for the last four years, affected especially the Southern Federal District of the country. Since 2010, a new outbreak area has been observed in the Northwestern Federal District.In order to study the evolution of African swine fever virus (ASFV) isolates, strains were collected in the Russian Federation from 2007 to 2011 and investigated by means of partial sequencing and fragment length polymorphism. In detail, 7 variable regions, namely B646L, E183L, I196L, B602L, I73R/I329R, I78R/I215L and KP86R were investigated. Phylogenetic analyses revealed 100% nucleotide identity of B646L and E183L gene sequences of all examined isolates. All isolates formed one genetic cluster within genotype II. Moreover, no amplified fragment length polymorphism (AFLP) was observed for B602L, I196L, I73R/I329R, and I78R/I215L genes. The flanking primers used to amplify the KP86R gene failed to amplify a product in all the isolates. The obtained data strongly suggests that only one ASFV virus variant caused the outbreaks from 2007 to 2011 in the territory of the Russian Federation. © 2012 Elsevier B.V.
- Published
- 2012
30. Development and inter-laboratory validation study of an improved new real-time PCR assay with internal control for detection and laboratory diagnosis of African swine fever virus
- Author
-
Gallardo, Carmina [0000-0003-3293-306X], Tignon, M., Gallardo, Carmina, Iscaro, C., Hutet, E., Van der Stede, Y., Kolbasov, D., De Mia, G. M., Le Potier, M. F., Bishop, Richard, Arias, Marisa, Koenen, F., Gallardo, Carmina [0000-0003-3293-306X], Tignon, M., Gallardo, Carmina, Iscaro, C., Hutet, E., Van der Stede, Y., Kolbasov, D., De Mia, G. M., Le Potier, M. F., Bishop, Richard, Arias, Marisa, and Koenen, F.
- Abstract
A real-time polymerase chain reaction (PCR) assay for the rapid detection of African swine fever virus (ASFV), multiplexed for simultaneous detection of swine beta-actin as an endogenous control, has been developed and validated by four National Reference Laboratories of the European Union for African swine fever (ASF) including the European Union Reference Laboratory. Primers and a TaqMan ® probe specific for ASFV were selected from conserved regions of the p72 gene. The limit of detection of the new real-time PCR assay is 5.7-57 copies of the ASFV genome. High accuracy, reproducibility and robustness of the PCR assay (CV ranging from 0.7 to 5.4%) were demonstrated both within and between laboratories using different real-time PCR equipments. The specificity of virus detection was validated using a panel of 44 isolates collected over many years in various geographical locations in Europe, Africa and America, including recent isolates from the Caucasus region, Sardinia, East and West Africa. Compared to the OIE-prescribed conventional and real-time PCR assays, the sensitivity of the new assay with internal control was improved, as demonstrated by testing 281 field samples collected in recent outbreaks and surveillance areas in Europe and Africa (170 samples) together with samples obtained through experimental infections (111 samples). This is particularly evident in the early days following experimental infection and during the course of the disease in pigs sub-clinically infected with strains of low virulence (from 35 up to 70dpi). The specificity of the assay was also confirmed on 150 samples from uninfected pigs and wild boar from ASF-free areas. Measured on the total of 431 tested samples, the positive deviation of the new assay reaches 21% or 26% compared to PCR and real-time PCR methods recommended by OIE. This improved and rigorously validated real-time PCR assay with internal control will provide a rapid, sensitive and reliable molecular tool for ASFV detect
- Published
- 2011
31. Reproductive Ratio for the Local Spread of African Swine Fever in Wild Boars in the Russian Federation.
- Author
-
Iglesias, I., Muñoz, M. J., Montes, F., Perez, A., Gogin, A., Kolbasov, D., and Torre, A.
- Subjects
WILD boar ,TRANSBOUNDARY animal diseases ,AFRICAN swine fever ,SWINE industry ,EPIDEMIOLOGY ,DISEASES - Abstract
African swine fever ( ASF) has caused the swine industry of the Russian Federation substantial economic losses over the last 7 years, and the disease spread from there to a number of neighbouring countries. Wild boar has been involved in the spread of the disease both at local and at transboundary levels. Understanding ASF dynamics in wild boars is prerequisite to preventing the spread and to designing and applying effective surveillance and control plans. The reproductive ratio ( R
0 ) is an epidemiological indicator commonly used to quantify the extent of disease spread. Here, it was estimated in nine spatio-temporal clusters of ASF in wild boar cases in the Russian Federation (2007-2013). Clusters were defined by exploring the maximum distance of association of ASF cases using K Ripley analysis and spatio-temporal scan statistics. A maximum spatial association of 133 km in wild boar cases was identified which is within de the conventional radius of surveillance zone (100-150 km). The mean range value of R0 = 1.58 (1.13-3.77) was lower compared to values previously estimated for ASF transmission within farms but similar to early estimates between farm ( R0 = 2-3), in domestic pigs using notification data in the Russian Federation. Results obtained provide quantitative knowledge on the epidemiology of ASF in wild boars in the Russian Federation. They identify the ASF transmission rate value in affected natural wild populations, for the first time, which could provide basis for modelling ASF transmission and suggest that current surveillance radius should be reviewed to make surveillance in wild nature more targeted and effective. [ABSTRACT FROM AUTHOR]- Published
- 2016
- Full Text
- View/download PDF
32. Exploring Charge Migration in Light-Harvesting Complexes Using Electron Paramagnetic Resonance Line Narrowing
- Author
-
Srivatsan, N., Weber, S., Kolbasov, D., and Norris, J. R.
- Abstract
The light-harvesting protein complex 1 (LH1) of the purple bacterium Rhodobacter sphaeroides exhibits EPR signals upon treatment with oxidizing reagents such as potassium ferricyanide. These signals are assigned to radical cations of the LH1's bacteriochlorophyll pigments, B880•+. An intriguing feature of the B880•+ EPR spectrum is the narrow line width exhibited relative to in vitro monomeric BChla•+ and the primary donor radical cation of the photosynthetic reaction center's special pair, P•+. In this paper, we investigate the temperature and oxidant concentration dependence of the B880•+ EPR spectrum with the aim of elucidating the mechanism for spectral line narrowing. The experimental data are interpreted in terms of EPR line narrowing that accompanies charge migration and spin exchange. For charge migration, the line-narrowing models are driven by standard, nonadiabatic electron transfer assisted by vibronic coupling. The results are consistent with a hypothesis that, in LH1, the EPR spectral shape is dominated by electron transfer instead of spin exchange. In addition, the electronic and energetic factors governing the inter-BChla cryogenic charge transport are explored. Using standard treatments, large reorganization energy and weak electronic coupling are obtained for the charge migration process. The EPR results support the view that highly delocalized radical cation states similar to that observed for the primary donor BChlas of the special pair of the photosynthetic reaction center do not occur in oxidized LH1 complexes in the 6−300 K temperature range. However, the EPR results are compatible with a highly asymmetrical version of the special pair. The unrealistically high value of reorganization energy for electron transfer is attributed to treating the charge migration process as if electron transfer were homogeneous. A more realistic value of reorganization energy is predicted to result if free-energy heterogeneity were to be included in modeling electron transfer in LH1.
- Published
- 2003
33. Asymmetric Electron Transfer in Reaction Centers of Purple Bacteria Strongly Depends on Different Electron Matrix Elements in the Active and Inactive Branches
- Author
-
Kolbasov, D. and Scherz, A.
- Abstract
We have re-examined the contribution of electronic matrix elements (V
1 ) between the primary electron donor and the accessory bacteriochlorophylls in the active (A) and inactive (B) branches of bacterial reaction centers (RC) to the unidirectional light-induced electron transfer (ET) (a preliminary report was recently given by Kolbasov and Scherz in Photosynthesis: Mechanisms and Effects; Garab, G., Ed.; Kluwer Academic Publishers: Dordrecht, 1998; Vol. II; pp 719−722). Our calculations showed that V1 B 2 is probably smaller by 3 orders of magnitude than V1 A 2 in Rb. sphaeroides and by at least 1 order of magnitude in Rps. viridis. These phenomena reflect the quantum interference and mutual cancellation of the resonance integrals corresponding to different ET pathways between atoms of P and the accessory bacteriochlorophyll in the inactive branch. The calculated values of V and the corresponding ET rate constants for mutated RC further support this conclusion. Zhang and Friesner (Proc. Natl. Acad. Sci. U.S.A.1998 , 95, 13603−13605), using more elaborate calculations, showed that V1 A /V1 B for Rps. viridis can reach a value of 14 for same reason, indicating that differences in the overlap matrix elements are key factors in the unidirectional electron flow in both organisms.- Published
- 2000
34. Identification of the serotype-specific proteins in African swine fever facilitates vaccine design and development.
- Author
-
Rock, D. L., Diel, D. G., Malogolovkin, A., Burmakina, G., Salnikov, N., Kolbasov, D., Tulman, E. R., Kutish, G. F., and Delhon, G.
- Subjects
AFRICAN swine fever ,VIRAL disease prevention ,SWINE diseases ,VIRUS diseases in swine ,SWINE vaccination ,SWINE genetics ,PROTEINS - Abstract
The article reports on the identification of the serotype-specific proteins in African swine fever (ASFV) which facilitates vaccine design and development. It is demonstrated that the genetic locus encoding ASFV CD2v and C-type lectin proteins mediates HAI serologic specificity and that CD2v/C-type lectin genotyping provides a simple method to group ASF viruses by serotype.
- Published
- 2016
35. Blueprint: Identification of the serotype-specific proteins in African swine fever.
- Author
-
Rock, D.L., Diel, D.G., Malogolovkin, A., Burmakina, G., Salnikov, N., Kolbasov, D., Tulman, E.R., Kutish, G. F., and Delhon, G.
- Subjects
AFRICAN swine fever ,SWINE industry - Abstract
The article focuses on the African swine fever that emerges as a threat to the swine industry and discusses the study to identify the serotype-specific proteins.
- Published
- 2016
36. A0726 - Expression of programmed death ligand-1 in the urothelium in nonbacterial chronic cystitis and bladder cancer.
- Author
-
Kosova, I., Barsegian, V., Sinyakova, L., Gundorova, L., and Kolbasov, D.
- Subjects
- *
BLADDER cancer , *UROTHELIUM , *CYSTITIS - Published
- 2023
- Full Text
- View/download PDF
37. PD-L1 Expression in Nonbacterial Chronic Cystitis and Bladder Cancer.
- Author
-
Kosova I, Barsegian V, Gundorova L, and Kolbasov D
- Subjects
- Humans, Female, Middle Aged, Aged, Male, Adult, Chronic Disease, Urinary Bladder pathology, Urinary Bladder metabolism, Urinary Bladder virology, Immunohistochemistry, Aged, 80 and over, B7-H1 Antigen metabolism, Urinary Bladder Neoplasms virology, Urinary Bladder Neoplasms metabolism, Urinary Bladder Neoplasms pathology, Cystitis virology, Cystitis metabolism
- Abstract
Introduction and Hypothesis: The objective was to assess PD-L1 expression in nonbacterial chronic cystitis (NCC) and bladder cancer (BC)., Methods: The present study included 20 NCC and 20 BC patients. The degree of inflammation of the bladder wall was assessed on slides stained with H&E. Viral pathogens (herpes simplex virus, Epstein-Barr virus, cytomegalovirus, and high-risk HPVs) were detected using real-time polymerase chain reaction analyses of the bladder specimens. Immunohistochemistry was performed to assess the PD-L1 expression in bladder tissue., Results: Expression of PD-L1 was detected in 40% of NCC patients and 85% of BC patients. Viral pathogens were found in 50% of NCC patients and 60% of BC patients, with EBV being the most common. In NCC patients the immune cell score correlated strongly with the degree of inflammatory infiltration of the bladder wall (r = 0.867, p < 0.001), the presence of lymphoid aggregates in the submucosa (r = 0.804, p < 0.001), koilocytosis (r = 0.620, p = 0.004), and the presence of viral pathogens (r = 0.784, p < 0.001). In BC patients the immune cell score correlated with the degree of inflammatory infiltration of the bladder wall (r = 0.534, p = 0.015) and the presence of viral pathogens (r = 0.626, p = 0.003), but not with the presence of lymphoid aggregates in the submucosa (r = 0.083, p = 0.729), and koilocytosis (r = 0.366, p = 0.112)., Conclusions: Expression of PD-L1 was detected in a cohort of NCC patients, although the PD-L1 positivity rate was lower than that in BC. Our results demonstrate that the degree of PD-L1 expression in bladder tissue is associated with the presence of viral infections and with the degree of inflammatory infiltration of the bladder wall in both NCC and BC., (© 2024. The International Urogynecological Association.)
- Published
- 2024
- Full Text
- View/download PDF
38. Administration Routes and Doses of the Attenuated African Swine Fever Virus Strain PSA-1NH Influence Cross-Protection of Pigs against Heterologous Challenge.
- Author
-
Vlasov M, Sindryakova I, Kudryashov D, Morgunov S, Kolbasova O, Lyska V, Zhivoderov S, Pivova E, Balyshev V, Namsrayn S, Sevskikh T, Sereda A, and Kolbasov D
- Abstract
African swine fever (ASF) is a lethal hemorrhagic disease of Suidae , i.e., domestic pigs and wild boars, caused by African swine fever virus (ASFV). The development of cross-protective vaccines against ASF is imperative for effective disease control, particularly in regions where ASF is endemic, potentially featuring multiple circulating ASFV isolates. The investigation of non-hemadsorbing naturally attenuated isolates and laboratory recombinant strains with a deletion in the EP402R gene has attracted interest. Our study aimed to assess the impacts of various administration routes and doses of the naturally attenuated ASFV-PSA-1NH (immunotype IV, genotype I) isolate on the manifestation of clinical signs of ASF and the level of protection against the heterologous ASFV-Stavropol 01/08 strain (seroimmunotype VIII, genotype II). The results demonstrated that the intranasal administration of a low dose of ASFV-PSA-1NH to pigs minimized the clinical signs of ASF and established a high level of protection against the heterologous strain ASFV-Stavropol 01/08. Despite the challenges in standardizing the dosage for intranasal administration, this approach appears as a viable alternative in ASF vaccination.
- Published
- 2024
- Full Text
- View/download PDF
39. Isolation and Identification of Caprine Arthritis Encephalitis Virus from Animals in the Republic of Mordovia.
- Author
-
Kolbasova O, Sevskikh T, Titov I, and Kolbasov D
- Abstract
This article presents the results of virological and genetic studies of an isolate of caprine arthritis encephalitis (CAE) virus from the republic of Mordovia, Russian Federation. The isolate was found during monitoring studies of goat blood samples for the viral genome, and the presence of antibodies to lentiviruses was detected. According to the recommendation of the OIE, the positive result of PCR was confirmed with nucleotide sequencing. It was found that the obtained nucleotide sequence is identical to the genome of small ruminant lentiviruses presented in the GenBank database. Phylogenetic analysis showed that the isolate "Mordovia-2018" was included in the same cluster with an isolate from the Tver region of the Russian Federation detected in 2008. The sequence of the fragment of the env -gene of the isolate from the republic of Mordovia is available in GenBank under the number MN186380.1. To isolate the virus, a fraction of peripheral blood monocyte cells from the animal's blood was added to a monolayer of lamb synovial membrane cell culture, and ten passages were carried out. The first manifestations of the cytopathic effect were observed after the third passage on the eighth day of cultivation in the form of single large cells of irregular shape with 5-7 nuclei. At the seventh passage, multiple syncytium with 7-12 nuclei were observed. At subsequent passage levels, the formation of syncytium containing more than 10-14 nuclei was observed.
- Published
- 2023
- Full Text
- View/download PDF
40. Listeria monocytogenes Invasion Into Sheep Kidney Epithelial Cells Depends on InlB, and Invasion Efficiency Is Modulated by Phylogenetically Defined InlB Isoforms.
- Author
-
Chalenko Y, Kolbasova O, Pivova E, Abdulkadieva M, Povolyaeva O, Kalinin E, Kolbasov D, and Ermolaeva S
- Abstract
The facultative intracellular pathogen Listeria monocytogenes is of major veterinary importance in small ruminants. Nevertheless, details of L. monocytogenes interactions with cells of small ruminants are not fully established. To study the potential of L. monocytogenes to infect sheep cells, we used the finite sheep kidney cell line (shKEC), which was infected with the wild-type L. monocytogenes strain EGDe. The invasion efficiency was 0.015 ± 0.004%. The invasion factor InlB was critically important for invasion, and inlB gene deletion almost prevented L. monocytogenes invasion into shKEC cells. Comparison of the potential of phylogenetically defined InlB isoforms to restore the invasive phenotype of the EGDeΔinlB strain demonstrated that although all InlB isoforms restored invasion of the EGDeΔinlB strain into shKEC cells, the InlB isoforms typical of highly virulent ruminant strains of the clonal complexes CC1 and CC7 were more efficient than isoforms typical of CC2 and CC9 strains (which are less virulent toward ruminants) in supporting invasion. Listeria monocytogenes effectively multiplied with a doubling of time in about 90 min after they entered the sheep cells. Intracellular bacteria moved using the well-known actin polymerization mechanism. Cell-to-cell spreading was restricted to the infection of a few tens of neighboring cells for 7 days. Overall, the obtained results demonstrated that (i) InlB is required for invasion into sheep cells, (ii) InlB isoforms might be important for hypervirulence of certain clonal groups toward ruminants, and (iii) L. monocytogenes effectively multiplies in ovine cells once entered., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Chalenko, Kolbasova, Pivova, Abdulkadieva, Povolyaeva, Kalinin, Kolbasov and Ermolaeva.)
- Published
- 2022
- Full Text
- View/download PDF
41. Growth Kinetics and Protective Efficacy of Attenuated ASFV Strain Congo with Deletion of the EP402 Gene.
- Author
-
Koltsova G, Koltsov A, Krutko S, Kholod N, Tulman ER, and Kolbasov D
- Subjects
- African Swine Fever prevention & control, African Swine Fever Virus growth & development, African Swine Fever Virus pathogenicity, Animals, Antibodies, Viral blood, COS Cells, Chlorocebus aethiops, Female, Genes, Viral, Hemagglutinins, Viral genetics, Hemagglutinins, Viral immunology, Macrophages virology, Male, Swine, Vaccines, Attenuated immunology, Viral Proteins immunology, Virus Replication, African Swine Fever immunology, African Swine Fever Virus genetics, African Swine Fever Virus immunology, Gene Deletion, Viral Proteins genetics, Viral Vaccines immunology
- Abstract
African swine fever (ASF) is an emerging disease threat to the swine industry worldwide. There is no vaccine against ASF, and progress is hindered by a lack of knowledge concerning the extent of ASFV strain diversity and the viral antigens conferring type-specific protective immunity in pigs. We have previously demonstrated that homologous ASFV serotype-specific proteins CD2v (EP402R) and/or C-type lectin are required for protection against challenge with the virulent ASFV strain Congo (Genotype I, Serogroup 2), and we have identified T-cell epitopes on CD2v which may be associated with serotype-specific protection. Here, using a cell-culture adapted derivative of the ASFV strain Congo (Congo-a) with specific deletion of the EP402R gene (ΔCongoCD2v) in swine vaccination/challenge experiments, we demonstrated that deletion of the EP402R gene results in the failure of ΔCongoCD2v to induce protection against challenge with the virulent strain Congo (Congo-v). While ΔCongoCD2v growth kinetics in COS-1 cells and primary swine macrophage culture were almost identical to parental Congo-a, replication of ΔCongoCD2v in vivo was significantly reduced compared with parental Congo-a. Our data support the idea that the CD2v protein is important for the ability of homologous live-attenuated vaccines to induce protective immunity against the ASFV strain Congo challenge in vivo.
- Published
- 2021
- Full Text
- View/download PDF
42. Listeria monocytogenes Infection of Bat Pipistrellus nathusii Epithelial cells Depends on the Invasion Factors InlA and InlB.
- Author
-
Povolyaeva O, Chalenko Y, Kalinin E, Kolbasova O, Pivova E, Kolbasov D, Yurkov S, and Ermolaeva S
- Abstract
L. monocytogenes is a widespread facultative intracellular pathogen. The range of natural hosts that supporting L. monocytogenes persistence in the environment has not been fully established yet. In this study, we were interested in the potential of L. monocytogenes to infect cells of bats, which are being increasingly recognized as a reservoir for microorganisms that are pathogenic to humans and domestic animals. A stable epithelial cell line was developed from the kidneys of Pipistrellus nathusii , a small bat widely distributed across Europe. The wild-type L. monocytogenes strain EGDe infected this cell line with an invasion efficiency of 0.0078 ± 0.0009%. Once it entered bat cells, L. monocytogenes doubled within about 70 minutes. When L. monocytogenes lacked either of the major invasion factors, InlA and InlB, invasion efficiency decreased by a factor of 10 and 25 respectively ( p < 0.000001). The obtained results suggest that bat epithelial cells are susceptible to L. monocytogenes infection and that L. monocytogenes invasion of bat cells depends on the major invasion factors InlA and InlB. These results constitute the first report on in vitro studies of L. monocytogenes infection in bats., Competing Interests: The authors declare no conflict of interest.
- Published
- 2020
- Full Text
- View/download PDF
43. Identification and Characterization of Bluetongue Virus Serotype 14 in Russia.
- Author
-
Koltsov A, Tsybanov S, Gogin A, Kolbasov D, and Koltsova G
- Abstract
This paper reports a case of bluetongue virus (BTV) infection in the Smolensk and Kaluga regions of Russia in 2011-2012. The virus was initially detected in heifers transferred in Russia from Germany through Poland and Belarus in 2011. On day 27 of quarantine, RNA and infectious viruses of BTV were detected in four heifers, but five were serologically positive. However, on day 3 before shipment, all heifers were seronegative and PCR-negative for BTV. Thus, a few animals from this consignment were viremic without any evident subclinical infection. Based on Seg-2 (VP2 gene) and Seg-5 (NS1 gene) sequencing, the recovered virus had 99.86-100% nucleotide identity with BTV-14-like viruses such as the vaccine BTV-14 strain RSArrrr/BTV 14 and the BTV-14 isolates detected in Lithuania and Poland in 2012. Subsequently, BTV-14 was also reported in local animals in two regions of Russia. During the monitoring survey, 1623 local animals within a 300-km radius were tested, of which 471 tested positive by ELISA and 183 by PCR for BTV-14 RNA. No other serotypes were identified in either imported or aboriginal animals within that radius. The Culicoides midges trapped at the site of the outbreak in May 2012 tested positive for the BTV-14 genome, indicating that the possible mechanism of spread most likely occurs via vector bites. However, further investigation is required to confirm this hypothesis, which would provide an improved understanding of the circulation and overwintering of BTV in northern latitudes., (Copyright © 2020 Koltsov, Tsybanov, Gogin, Kolbasov and Koltsova.)
- Published
- 2020
- Full Text
- View/download PDF
44. Identifying climate-sensitive infectious diseases in animals and humans in Northern regions.
- Author
-
Omazic A, Bylund H, Boqvist S, Högberg A, Björkman C, Tryland M, Evengård B, Koch A, Berggren C, Malogolovkin A, Kolbasov D, Pavelko N, Thierfelder T, and Albihn A
- Subjects
- Animals, Arctic Regions epidemiology, Communicable Diseases etiology, Communicable Diseases veterinary, Europe epidemiology, Geography, Greenland epidemiology, Humans, Incidence, Prevalence, Russia epidemiology, Zoonoses etiology, Climate Change, Communicable Diseases epidemiology, Zoonoses epidemiology
- Abstract
Background: General knowledge on climate change effects and adaptation strategies has increased significantly in recent years. However, there is still a substantial information gap regarding the influence of climate change on infectious diseases and how these diseases should be identified. From a One Health perspective, zoonotic infections are of particular concern. The climate in Northern regions is changing faster than the global average. This study sought to identify climate-sensitive infectious diseases (CSIs) of relevance for humans and/or animals living in Northern regions. Inclusion criteria for CSIs were constructed using expert assessments. Based on these principles, 37 potential CSIs relevant for Northern regions were identified. A systematic literature search was performed in three databases using an explicit stepwise approach to determine whether the literature supports selection of these 37 potential CSIs., Results: In total, 1275 nominated abstracts were read and categorised using predefined criteria. Results showed that arthropod vector-borne diseases in particular are recognised as having potential to expand their distribution towards Northern latitudes and that tick-borne encephalitis and borreliosis, midge-borne bluetongue and the parasitic infection fasciolosis can be classified as climate-sensitive. Many of the other potential CSIs considered are affected by extreme weather events, but could not be clearly classified as climate-sensitive. An additional literature search comparing awareness of climate influences on potential CSIs between 1997-2006 and 2007-2016 showed an increase in the number of papers mentioning effects of climate change., Conclusions: The four CSIs identified in this study could be targeted in a systematic surveillance programme in Northern regions. It is evident that climate change can affect the epidemiology and geographical range of many infectious diseases, but there were difficulties in identifying additional CSIs, most likely because other factors may be of equal or greater importance. However, climate-ecological dynamics are constantly under change, and therefore diseases may fall in or out of the climate-sensitive definition over time. There is increasing awareness in the literature of the effects of climate change on infectious diseases over time.
- Published
- 2019
- Full Text
- View/download PDF
45. Genetic and antigenic diversity of African swine fever virus.
- Author
-
Malogolovkin A and Kolbasov D
- Subjects
- African Swine Fever metabolism, Animals, Cross Protection genetics, Cross Protection immunology, Genome, Viral, Genotype, Serogroup, Swine, Viral Proteins genetics, African Swine Fever immunology, African Swine Fever virology, African Swine Fever Virus genetics, African Swine Fever Virus immunology, Antigenic Variation, Genetic Variation, Host-Pathogen Interactions
- Abstract
African swine fever virus (ASFV) is the only known DNA arbovirus, and the ability to replicate efficiently in both insect and mammalian cells is encoded in its viral genome. Despite having a relatively low overall genomic mutation rate, ASFV demonstrates genetic diversity in certain genes and complexity in gene content in other genomic regions, indicating that ASFV may exploit multiple mechanisms for diversification and acquire new phenotype characteristics. ASFV antigenic diversity is reflected in the ability to type cross-protective viruses together into serogroups, largely based on antibody-mediated inhibition of hemadsorption. Here we review ASFV genetic signatures of ASFV type specificity, genome variability, and the hemadsorption as a means of defining virus antigenic type, and how these may be used toward defining antigenic and phenotypic diversity that is problematic for development of vaccine solutions to ASF., (Copyright © 2019. Published by Elsevier B.V.)
- Published
- 2019
- Full Text
- View/download PDF
46. Identification of T-cell epitopes in African swine fever virus CD2v and C-type lectin proteins.
- Author
-
Burmakina G, Malogolovkin A, Tulman ER, Xu W, Delhon G, Kolbasov D, and Rock DL
- Subjects
- Animals, Enzyme-Linked Immunospot Assay, Epitope Mapping, Interferon-gamma metabolism, Swine, African Swine Fever Virus immunology, Epitopes, T-Lymphocyte, Lectins, C-Type immunology, Viral Proteins immunology
- Abstract
African swine fever (ASF) is an emerging disease threat for the swine industry worldwide. No ASF vaccine is available, and progress is hindered by lack of knowledge concerning the extent of ASF virus (ASFV) strain diversity and the viral antigens conferring type-specific protective immunity in pigs. Previously, we demonstrated that ASFV serotype-specific proteins CD2v (EP402R) and/or C-type lectin (EP153R) are important for protection against homologous ASF infection. Here, we identified six discrete T-cell epitope regions present on CD2v and C-type lectin using IFN-γ ELISpot assay and PBMCs from ASF immune animals, indicating cellular reactivity to these proteins in the context of ASFV infection and protective immunity. Notably, three of the epitope regions map to previously described serotype-specific signature regions of these proteins. Improved understanding of ASFV protective antigens, relevant epitopes and their diversity in nature will facilitate ASFV subunit vaccine design and development.
- Published
- 2019
- Full Text
- View/download PDF
47. [A prognostic value of level of antiviral antibodies in the development of recurrence of bladder cancer].
- Author
-
Kosova IV, Loran OB, Sinyakova LA, Gundorova LV, Kosov VA, Pogodina IE, and Kolbasov DN
- Subjects
- Adult, Aged, Aged, 80 and over, Antibodies, Viral, Antiviral Agents, Female, Humans, Immunoglobulin G, Male, Middle Aged, Neoplasm Recurrence, Local, Prognosis, Urinary Bladder Neoplasms
- Abstract
Introduction: Serological diagnosis of virus-associated tumors attracts the attention of many specialists. The changes in the level of antiviral antibodies in tumors of different localizations are proved. In some cases, the authors suggest using these data either for screening of tumors or for controlling the cure., Aim: to evaluate the predictive value of antiviral antibodies for the recurrence of bladder cancer., Materials and Methods: a level of antiviral antibodies (IgG, M) against Epstein-Barr virus (EBV), herpes simplex virus (HSV) 1 and 2 types, cytomegalovirus (CMV) of 100 patients with bladder cancer (72 men and 28 women) aged from 38 to 90 years (mean age 65+/-10) was studied. Multivariate analysis with a construction of classification tree was performed. The recurrence of the bladder cancer was used as the dependent variable., Results: in patients with recurrence of bladder cancer there was an increase in the level of anti-CMV IgG (616.5+/-501.46 U/ml vs. 339.06+/-306.61 U/ml, p=0.0017) and anti-EBV IgG-EBNA (246,7+/-207 U/ml vs. 141,5+/-163,7 U/ml, p=0.0118). After the construction of the classification tree, anti-CMV IgG, anti-EBV IgG-EBNA, tumor stage and the presence of CMV DNA in tumor tissue were selected. It allowed to classify correctly 20 of 24 patients with recurrence and 58 of 72 patients without relapse. The most significant predictors included anti-CMV IgG level (100%), anti-BNA IgG level (78%) and tumor stage (50%). The sensitivity, specificity, positive prognostic value (probability of tumor detection in patients with a positive test result), negative prognostic value (probability of absence of the tumor in persons with a negative test result) and accuracy were 83.33%, 80.56%, 58.82%, 93.55% and 81.25%, respectively. A multivariate analysis (binary logistic regression) was performed and a reliable model (2=22,438, p=0,00043) was created, including the following parameters: anti-CMV IgG more than 670 u/ml, anti-BNA IgG more than 130 u/ml, the degree of anaplasia, the presence CMV and/or EBV DNA in tumor tissue. Based on the regression equation, an accuracy test for prediction of tumor recurrence was carried out, which resulted in fairly high predictive results: specificity and sensitivity were 95.2% and 33.3%, respectively., Conclusions: anti-CMV IgG level more than 670 U/ml and anti-BNA IgG level more than 130 U/ml are reliable predictors for the recurrence of bladder cancer.
- Published
- 2018
48. African Swine Fever Virus, Siberia, Russia, 2017.
- Author
-
Kolbasov D, Titov I, Tsybanov S, Gogin A, and Malogolovkin A
- Subjects
- African Swine Fever history, Animals, DNA, Viral, Genome, Viral, Genotype, History, 21st Century, Siberia epidemiology, Swine, African Swine Fever epidemiology, African Swine Fever virology, African Swine Fever Virus classification, African Swine Fever Virus genetics
- Abstract
African swine fever (ASF) is arguably the most dangerous and emerging swine disease worldwide. ASF is a serious problem for the swine industry. The first case of ASF in Russia was reported in 2007. We report an outbreak of ASF in Siberia, Russia, in 2017.
- Published
- 2018
- Full Text
- View/download PDF
49. Virulent strain of African swine fever virus eclipses its attenuated derivative after challenge.
- Author
-
Titov I, Burmakina G, Morgunov Y, Morgunov S, Koltsov A, Malogolovkin A, and Kolbasov D
- Subjects
- African Swine Fever prevention & control, African Swine Fever Virus genetics, Amino Acid Sequence, Animals, Swine, Vaccines, Attenuated immunology, Viral Load, Viral Proteins, Viral Vaccines immunology, Virulence, African Swine Fever virology, African Swine Fever Virus pathogenicity
- Abstract
African swine fever (ASF) is one of the most devastating diseases affecting the swine industry worldwide. No effective vaccine is currently available for disease prevention and control. Although live attenuated vaccines (LAV) have demonstrated great potential for immunizing against homologous strains of African swine fever virus (ASFV), adverse reactions from LAV remain a concern. Here, by using a homologous ASFV Congo strain system, we show passage-attenuated Congo LAV to induce an efficient protective immune response against challenge with the virulent parental Congo strain. Notably, only the parental challenge Congo strain was identified in blood and organs of recovered pigs through B602L gene PCR, long-range PCR, nucleotide sequencing and virus isolation. Thus, despite the great protective potential of homologous attenuated ASFV strain, the challenge Congo strain can persist for weeks in recovered pigs and a recrudescence of virulent virus at late time post-challenge may occur.
- Published
- 2017
- Full Text
- View/download PDF
50. [High oncogenic risk human papillomavirus and urinary bladder cancer].
- Author
-
Loran OB, Sinyakova LA, Gundorova LV, Kosov VA, Kosova IV, Pogodina IE, and Kolbasov DN
- Subjects
- Adult, Aged, Aged, 80 and over, Antibodies, Viral blood, Cytopathogenic Effect, Viral, Enzyme-Linked Immunosorbent Assay, Female, Humans, Male, Middle Aged, Neoplasm Staging, Papilloma blood, Papilloma pathology, Papillomavirus Infections blood, Papillomavirus Infections pathology, Urinary Bladder Neoplasms blood, Urinary Bladder Neoplasms pathology, Papilloma virology, Papillomaviridae isolation & purification, Papillomavirus Infections virology, Urinary Bladder Neoplasms virology
- Abstract
Aim: To determine the role of human papillomavirus (HPV) of high oncogenic risk in the development of urinary bladder cancer., Materials and Methods: 100 patients (72 men and 28 women) aged 38 to 90 years (mean age 65+/-10 years) diagnosed with bladder cancer were examined and underwent treatment. Clinical assessment was complemented by enzyme-linked immunosorbent assays for the presence of antiviral antibodies to herpes simplex virus (HSV) type 1 and type 2, cytomegalovirus (CMV), Epstein-Barr virus (EBV), urethra scraping for detecting high oncogenic risk HPV. Tumor tissue was sampled for PCR virus detection. Semi-quantitative analysis was used to evaluate the components of lymphocyte-plasmocyte and leukocyte infiltrates and cytopathic changes in tumor tissue., Results: There were positive correlations between cytopathic cell changes (koylocytosis and intranuclear inclusions, as manifestations of HPV) and the level of antiviral antibodies, the presence of viruses in the tumor, as well as with the components of the lymphoid-plasmocyte infiltrate. Negative correlations were found between the presence of papillomatosis and the above changes., Conclusion: Human papillomavirus is believed to be a trigger for the initiation of a tumor in young patients with a latent infection (CMV and EBV, HSV, HPV). Cytopathic changes (kylocytosis and intranuclear inclusions) were associated with the activity and morphological features of herpes-viral infections. Their degree varied depending on the stage of the process, but not on the anaplasia degree. Papillomatosis is associated with a more favorable course of the tumor process.
- Published
- 2017
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.