38 results on '"Ko EK"'
Search Results
2. Heterozygous ZNHIT3 variants within the 17q12 recurrent deletion region are associated with Mayer-Rokitansky-Kuster Hauser (MRKH) syndrome.
- Author
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Brakta S, Du Q, Chorich LP, Hawkins ZA, Sullivan ME, Ko EK, Kim HG, Knight J, Taylor HS, Friez M, Phillips JA 3rd, and Layman LC
- Subjects
- Adolescent, Adult, Female, Humans, Pedigree, 46, XX Disorders of Sex Development genetics, Chromosomes, Human, Pair 17 genetics, Congenital Abnormalities genetics, Heterozygote, Mullerian Ducts abnormalities
- Abstract
The molecular basis of mullerian aplasia, also known as Mayer-Rokitansky-Kuster Hauser (MRKH) or congenital absence of the uterus and vagina, is largely unknown. We applied a multifaceted genetic approach to studying the pathogenesis of MRKH including exome sequencing of trios and duos, genome sequencing of families, qPCR, RT-PCR, and Sanger sequencing to detect intragenic deletions, insertions, splice variants, single nucleotide variants, and rearrangements in 132 persons with MRKH. We identified two heterozygous variants in ZNHIT3 localized to a commonly involved CNV region at chromosome 17q12 in two different families with MRKH. One is a frameshift, truncating variant that is predicted to interfere with steroid hormone binding of the LxxLL sequence of the C-terminal region. The second variant is a double missense/stopgain variant. Both variants impair protein expression in vitro. In addition, four more probands with MRKH harbored the stopgain variant without the nearby missense variant. In total, 6/132 (4.5%) of patients studied, including five with associated anomalies (type 2 MRKH), had ZNHIT3 variants that impair function in vitro. Our findings implicate ZNHIT3 as an important gene associated with MRKH within the 17q12 CNV region., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
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3. Disruption of H3K36 methylation provokes cellular plasticity to drive aberrant glandular formation and squamous carcinogenesis.
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Ko EK, Anderson A, D'souza C, Zou J, Huang S, Cho S, Alawi F, Prouty S, Lee V, Yoon S, Krick K, Horiuchi Y, Ge K, Seykora JT, and Capell BC
- Subjects
- Humans, Cell Plasticity, Methylation, Carcinogenesis genetics, Histones metabolism, Carcinoma, Squamous Cell genetics
- Abstract
Chromatin organization is essential for maintaining cell-fate trajectories and developmental programs. Here, we find that disruption of H3K36 methylation dramatically impairs normal epithelial differentiation and development, which promotes increased cellular plasticity and enrichment of alternative cell fates. Specifically, we observe a striking increase in the aberrant generation of excessive epithelial glandular tissues, including hypertrophic salivary, sebaceous, and meibomian glands, as well as enhanced squamous tumorigenesis. These phenotypic and gene expression manifestations are associated with loss of H3K36me2 and rewiring of repressive H3K27me3, changes we also observe in human patients with glandular hyperplasia. Collectively, these results have identified a critical role for H3K36 methylation in both in vivo epithelial cell-fate decisions and the prevention of squamous carcinogenesis and suggest that H3K36 methylation modulation may offer new avenues for the treatment of numerous common disorders driven by altered glandular function, which collectively affect large segments of the human population., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2023 Elsevier Inc. All rights reserved.)
- Published
- 2024
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4. Mettl3-catalyzed m 6 A regulates histone modifier and modification expression in self-renewing somatic tissue.
- Author
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Maldonado López AM, Ko EK, Huang S, Pacella G, Kuprasertkul N, D'souza CA, Reyes Hueros RA, Shen H, Stoute J, Elashal H, Sinkfield M, Anderson A, Prouty S, Li HB, Seykora JT, Liu KF, and Capell BC
- Subjects
- Animals, Mice, Adenosine, Cell Adhesion, RNA, Messenger, Catalysis, Histones, Methyltransferases genetics
- Abstract
N6 -methyladenosine (m
6 A) is the most abundant modification on messenger RNAs (mRNAs) and is catalyzed by methyltransferase-like protein 3 (Mettl3). To understand the role of m6 A in a self-renewing somatic tissue, we deleted Mettl3 in epidermal progenitors in vivo. Mice lacking Mettl3 demonstrate marked features of dysfunctional development and self-renewal, including a loss of hair follicle morphogenesis and impaired cell adhesion and polarity associated with oral ulcerations. We show that Mettl3 promotes the m6 A-mediated degradation of mRNAs encoding critical histone modifying enzymes. Depletion of Mettl3 results in the loss of m6 A on these mRNAs and increases their expression and associated modifications, resulting in widespread gene expression abnormalities that mirror the gross phenotypic abnormalities. Collectively, these results have identified an additional layer of gene regulation within epithelial tissues, revealing an essential role for m6 A in the regulation of chromatin modifiers, and underscoring a critical role for Mettl3-catalyzed m6 A in proper epithelial development and self-renewal.- Published
- 2023
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5. Tuning orbital-selective phase transitions in a two-dimensional Hund's correlated system.
- Author
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Ko EK, Hahn S, Sohn C, Lee S, Lee SB, Sohn B, Kim JR, Son J, Song J, Kim Y, Kim D, Kim M, Kim CH, Kim C, and Noh TW
- Subjects
- Photoelectron Spectroscopy, Research Design, Sarcomeres
- Abstract
Hund's rule coupling (J) has attracted much attention recently for its role in the description of the novel quantum phases of multi-orbital materials. Depending on the orbital occupancy, J can lead to various intriguing phases. However, experimental confirmation of the orbital occupancy dependency has been difficult as controlling the orbital degrees of freedom normally accompanies chemical inhomogeneities. Here, we demonstrate a method to investigate the role of orbital occupancy in J related phenomena without inducing inhomogeneities. By growing SrRuO
3 monolayers on various substrates with symmetry-preserving interlayers, we gradually tune the crystal field splitting and thus the orbital degeneracy of the Ru t2g orbitals. It effectively varies the orbital occupancies of two-dimensional (2D) ruthenates. Via in-situ angle-resolved photoemission spectroscopy, we observe a progressive metal-insulator transition (MIT). It is found that the MIT occurs with orbital differentiation: concurrent opening of a band insulating gap in the dxy band and a Mott gap in the dxz/yz bands. Our study provides an effective experimental method for investigation of orbital-selective phenomena in multi-orbital materials., (© 2023. The Author(s).)- Published
- 2023
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6. Nanoscale Enhancement of the Local Optical Conductivity near Cracks in Metallic SrRuO 3 Film.
- Author
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Roh CJ, Ko EK, Chang Y, Park SH, Mun J, Kim M, and Noh TW
- Abstract
Cracking has been recognized as a major obstacle degrading material properties, including structural stability, electrical conductivity, and thermal conductivity. Recently, there have been several reports on the nanosized cracks (nanocracks), particularly in the insulating oxides. In this work, we comprehensively investigate how nanocracks affect the physical properties of metallic SrRuO
3 (SRO) thin films. We grow SRO/SrTiO3 (STO) bilayers on KTaO3 (KTO) (001) substrates, which provide +1.7% tensile strain if the SRO layer is grown epitaxially. However, the SRO/STO bilayers suffer from the generation and propagation of nanocracks, and then, the strain becomes inhomogeneously relaxed. As the thickness increases, the nanocracks in the SRO layer become percolated, and its dc conductivity approaches zero. Notably, we observe an enhancement of the local optical conductivity near the nanocrack region using scanning-type near-field optical microscopy. This enhancement is attributed to the strain relaxation near the nanocracks. Our work indicates that nanocracks can be utilized as promising platforms for investigating local emergent phenomena related to strain effects.- Published
- 2023
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7. Heteroepitaxial Control of Fermi Liquid, Hund Metal, and Mott Insulator Phases in Single-Atomic-Layer Ruthenates.
- Author
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Kim JR, Sohn B, Lee HJ, Lee S, Ko EK, Hahn S, Lee S, Kim Y, Kim D, Kim HJ, Kim Y, Son J, Ahn CH, Walker FJ, Go A, Kim M, Kim CH, Kim C, and Noh TW
- Abstract
Interfaces between dissimilar correlated oxides can offer devices with versatile functionalities, and great efforts have been made to manipulate interfacial electronic phases. However, realizing such phases is often hampered by the inability to directly access the electronic structure information; most correlated interfacial phenomena appear within a few atomic layers from the interface. Here, atomic-scale epitaxy and photoemission spectroscopy are utilized to realize the interface control of correlated electronic phases in atomic-scale ruthenate-titanate heterostructures. While bulk SrRuO
3 is a ferromagnetic metal, the heterointerfaces exclusively generate three distinct correlated phases in the single-atomic-layer limit. The theoretical analysis reveals that atomic-scale structural proximity effects yield Fermi liquid, Hund metal, and Mott insulator phases in the quantum-confined SrRuO3 . These results highlight the extensive interfacial tunability of electronic phases, hitherto hidden in the atomically thin correlated heterostructure. Moreover, this experimental platform suggests a way to control interfacial electronic phases of various correlated materials., (© 2023 The Authors. Advanced Materials published by Wiley-VCH GmbH.)- Published
- 2023
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8. Extended Oxygen Octahedral Tilt Proximity near Oxide Heterostructures.
- Author
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Mun J, Ko EK, Kang B, Gil B, Kim CH, Hahn S, Song J, Zhu Y, Sohn C, Noh TW, and Kim M
- Abstract
The oxide interfaces between materials with different structural symmetries have been actively studied due to their novel physical properties. However, the investigation of intriguing interfacial phenomena caused by the oxygen octahedral tilt (OOT) proximity effect has not been fully exploited, as there is still no clear understanding of what determines the proximity length and what the underlying control mechanism is. Here, we achieved scalability of the OOT proximity effect in SrRuO
3 (SRO) by epitaxial strain near the SRO/SrTiO3 heterointerface. We demonstrated that the OOT proximity length scale of SRO is extended from 4 unit cells to 14 unit cells by employing advanced scanning transmission electron microscopy. We also suggest that this variation may originate from changes in phonon dispersions due to electron-phonon coupling in SRO. This study will provide in-depth insights into the structural gradients of correlated systems and facilitate potential device applications.- Published
- 2023
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9. Higher harmonics in planar Hall effect induced by cluster magnetic multipoles.
- Author
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Song J, Oh T, Ko EK, Lee JH, Kim WJ, Zhu Y, Yang BJ, Li Y, and Noh TW
- Abstract
Antiferromagnetic (AFM) materials are attracting tremendous attention due to their spintronic applications and associated novel topological phenomena. However, detecting and identifying the spin configurations in AFM materials are quite challenging due to the absence of net magnetization. Herein, we report the practicality of utilizing the planar Hall effect (PHE) to detect and distinguish "cluster magnetic multipoles" in AFM Nd
2 Ir2 O7 (NIO-227) fully strained films. By imposing compressive strain on the spin structure of NIO-227, we artificially induced cluster magnetic multipoles, namely dipoles and A2 - and T1 -octupoles. Importantly, under magnetic field rotation, each magnetic multipole exhibits distinctive harmonics of the PHE oscillation. Moreover, the planar Hall conductivity has a nonlinear magnetic field dependence, which can be attributed to the magnetic response of the cluster magnetic octupoles. Our work provides a strategy for identifying cluster magnetic multipoles in AFM systems and would promote octupole-based AFM spintronics., (© 2022. The Author(s).)- Published
- 2022
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10. An optimized scheme for detecting magneto-optic effects in ultrathin films with Sagnac interferometry.
- Author
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Zhu XD, Ko EK, Kimbell G, and Robinson J
- Abstract
Sagnac interferometry is advantageous in measuring time-reversal-symmetry breaking effects in ferromagnetic and antiferromagnetic materials as it suppresses time-reversal symmetric birefringent effects that are ubiquitous and often overwhelming in optical detection systems. When its sensitivity is limited only by the amplifier noise in the photo-detector, one needs to optimize the optical power that returns to the detector. We demonstrate an experimental scheme that maximizes the returning optical power in a Sagnac interferometry when detecting the magneto-optic effect in ultrathin films. In this scheme, the optical beam bearing the Faraday effect on a thin film is reflected at a second surface coated with a highly reflective gold film. The gold film increases the returned optical power by a factor of 4-5. For a normal-incidence Sagnac interferometer, this scheme yields an increase in the signal-to-noise ratio by the same factor. For an oblique-incidence Sagnac interferometer, this scheme should yield an increase in the signal-to-noise ratio by a factor of 20-25. For illustration, this scheme is used to measure magnetization curves and Kerr rotation images of 4.5-unit-cell thick SrRuO
3 (001) grown on SrTiO3 (001).- Published
- 2022
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11. Methyltransferases in the Pathogenesis of Keratinocyte Cancers.
- Author
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Ko EK and Capell BC
- Abstract
Recent evidence suggests that the disruption of gene expression by alterations in DNA, RNA, and histone methylation may be critical contributors to the pathogenesis of keratinocyte cancers (KCs), made up of basal cell carcinoma (BCC) and cutaneous squamous cell carcinoma (cSCC), which collectively outnumber all other human cancers combined. While it is clear that methylation modifiers are frequently dysregulated in KCs, the underlying molecular and mechanistic changes are only beginning to be understood. Intriguingly, it has recently emerged that there is extensive cross-talk amongst these distinct methylation processes. Here, we summarize and synthesize the latest findings in this space and highlight how these discoveries may uncover novel therapeutic approaches for these ubiquitous cancers.
- Published
- 2021
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12. Superconducting Sr 2 RuO 4 Thin Films without Out-of-Phase Boundaries by Higher-Order Ruddlesden-Popper Intergrowth.
- Author
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Kim J, Mun J, Palomares García CM, Kim B, Perry RS, Jo Y, Im H, Lee HG, Ko EK, Chang SH, Chung SB, Kim M, Robinson JWA, Yonezawa S, Maeno Y, Wang L, and Noh TW
- Abstract
Ruddlesden-Popper (RP) phases ( A
n +1 Bn O3 n +1 , n = 1, 2,···) have attracted intensive research with diverse functionalities for device applications. However, the realization of a high-quality RP-phase film is hindered by the formation of out-of-phase boundaries (OPBs) that occur at terrace edges, originating from lattice mismatch in the c -axis direction with the A ' B 'O3 ( n = ∞) substrate. Here, using strontium ruthenate RP-phase Sr2 RuO4 ( n = 1) as a model system, an experimental approach for suppressing OPBs was developed. By tuning the growth parameters, the Sr3 Ru2 O7 ( n = 2) phase was formed in a controlled manner near the film-substrate interface. This higher-order RP-phase then blocked the subsequent formation of OPBs, resulting in nearly defect-free Sr2 RuO4 layer at the upper region of the film. Consequently, the Sr2 RuO4 thin films exhibited superconductivity up to 1.15 K, which is the highest among Sr2 RuO4 films grown by pulsed laser deposition. This work paves the way for synthesizing pristine RP-phase heterostructures and exploring their unique physical properties.- Published
- 2021
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13. Prevalence and Antimicrobial Characteristics of Shiga Toxin-Producing Escherichia coli Isolates from Pork in Korea.
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Heo EJ, Ko EK, Kang HJ, Kim YJ, Park HJ, Wee SH, and Moon JS
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- Adhesins, Bacterial genetics, Animals, DNA, Bacterial, Drug Resistance, Multiple, Bacterial, Escherichia coli Infections microbiology, Escherichia coli Proteins genetics, Food Microbiology, Hemolysin Proteins genetics, Microbial Sensitivity Tests, Pork Meat microbiology, Prevalence, Republic of Korea epidemiology, Serogroup, Shiga Toxin 1 genetics, Shiga-Toxigenic Escherichia coli isolation & purification, Swine, Virulence, Anti-Bacterial Agents pharmacology, Escherichia coli Infections epidemiology, Shiga-Toxigenic Escherichia coli drug effects, Shiga-Toxigenic Escherichia coli genetics
- Abstract
Shiga toxin-producing Escherichia coli (STEC) strains are important food-borne pathogens that can be transmitted through the consumption of food products derived from pigs. Moreover, antimicrobial resistance in STEC has been a matter of increasing concern. The aim of this study was to investigate the prevalence and antimicrobial characteristics of STEC isolates from pork in Korea. We isolated 131 isolates of E. coli from 334 pork samples collected from slaughterhouses and retail markets from 2008 to 2009. Among the 131 isolates, 6 (4.58%) were confirmed to belong to 6 different serotypes of STEC. All six STEC isolates contained stx1 and eaeA virulence genes, and four of them additionally carried the hly gene. The minimum inhibitory concentration (MIC) of 15 antibiotics (amoxicillin/clavulanic acid, ampicillin, cephalothin, cefoxitin, ceftiofur, gentamicin, neomycin, streptomycin, nalidixic acid, ciprofloxacin, colistin, chloramphenicol, florfenicol, tetracycline and sulfamethoxazole/trimethoprim) toward the STEC isolates was determined. As a result, three strains were associated with high MICs for florfenicol and chloramphenicol (64 μg/mL). Furthermore, all three strains were found to contain the florfenicol-resistant gene ( floR ) but not the chloramphenicol-resistant gene ( cat ). Sequence alignment and BLAST analysis of the polymerase chain reaction products of the floR gene indicated that they contained sequences with homology to the floR gene of E. coli or Salmonella enterica serovar, Heidelberg. This is the first report on the detection of floR in STEC isolated from pork obtained from retail markets in Korea.
- Published
- 2020
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14. Strain engineering of the magnetic multipole moments and anomalous Hall effect in pyrochlore iridate thin films.
- Author
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Kim WJ, Oh T, Song J, Ko EK, Li Y, Mun J, Kim B, Son J, Yang Z, Kohama Y, Kim M, Yang BJ, and Noh TW
- Abstract
The recent observation of the anomalous Hall effect (AHE) without notable magnetization in antiferromagnets has suggested that ferromagnetic ordering is not a necessary condition. Thus, recent theoretical studies have proposed that higher-rank magnetic multipoles formed by clusters of spins (cluster multipoles) can generate the AHE without magnetization. Despite such an intriguing proposal, controlling the unconventional AHE by inducing these cluster multipoles has not been investigated. Here, we demonstrate that strain can manipulate the hidden Berry curvature effect by inducing the higher-rank cluster multipoles in spin-orbit-coupled antiferromagnets. Observing the large AHE on fully strained antiferromagnetic Nd
2 Ir2 O7 thin films, we prove that strain-induced cluster T1 -octupoles are the only source of observed AHE. Our results provide a previously unidentified pathway for generating the unconventional AHE via strain-induced magnetic structures and establish a platform for exploring undiscovered topological phenomena via strain in correlated materials., (Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC).)- Published
- 2020
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15. Colossal flexoresistance in dielectrics.
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Park SM, Wang B, Paudel T, Park SY, Das S, Kim JR, Ko EK, Lee HG, Park N, Tao L, Suh D, Tsymbal EY, Chen LQ, Noh TW, and Lee D
- Abstract
Dielectrics have long been considered as unsuitable for pure electrical switches; under weak electric fields, they show extremely low conductivity, whereas under strong fields, they suffer from irreversible damage. Here, we show that flexoelectricity enables damage-free exposure of dielectrics to strong electric fields, leading to reversible switching between electrical states-insulating and conducting. Applying strain gradients with an atomic force microscope tip polarizes an ultrathin film of an archetypal dielectric SrTiO
3 via flexoelectricity, which in turn generates non-destructive, strong electrostatic fields. When the applied strain gradient exceeds a certain value, SrTiO3 suddenly becomes highly conductive, yielding at least around a 108 -fold decrease in room-temperature resistivity. We explain this phenomenon, which we call the colossal flexoresistance, based on the abrupt increase in the tunneling conductance of ultrathin SrTiO3 under strain gradients. Our work extends the scope of electrical control in solids, and inspires further exploration of dielectric responses to strong electromechanical fields.- Published
- 2020
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16. Controllable Thickness Inhomogeneity and Berry Curvature Engineering of Anomalous Hall Effect in SrRuO 3 Ultrathin Films.
- Author
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Wang L, Feng Q, Lee HG, Ko EK, Lu Q, and Noh TW
- Abstract
In quantum matters hosting electron-electron correlation and spin-orbit coupling, spatial inhomogeneities, arising from competing ground states, can be essential for understanding exotic topological properties. A prominent example is Hall anomalies observed in SrRuO
3 films, which were interpreted in terms of either magnetic skyrmion-induced topological Hall effect or inhomogeneous anomalous Hall effect (AHE). To clarify this ambiguity, we systematically investigated the evolution of AHE with controllable inhomogeneities in SrRuO3 film thickness ( tSRO ). By exploiting the step-flow growth of SrRuO3 films, we induced a microscopically ordered stripe pattern with one-unit-cell differences in tSRO . The associated spatial distribution of momentum-space Berry curvatures enables a two-channel AHE with hump-like Hall anomalies, which can be continuously engineered according to non-integer tSRO . We further microscopically characterized the stripe-like ferromagnetic domains and two-step magnetic switching behavior in the inhomogeneous SrRuO3 film. These unique features can be utilized to identify the two-channel AHE model and understand its microscopic origin.- Published
- 2020
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17. Narcotrend-guided intraoperative care of a Trisomy 21 paediatric patient who underwent occipitocervical fusion.
- Author
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Villa EK, Villa D, and Bundoc RC
- Subjects
- Child, Down Syndrome complications, Female, Humans, Joint Instability etiology, Anesthesia, General, Cervical Vertebrae surgery, Electroencephalography instrumentation, Joint Instability surgery, Monitoring, Intraoperative instrumentation, Spinal Fusion
- Abstract
A 9-year-old female with Trisomy 21 with complex craniovertebral instability causing severe cervicomedullary compression underwent occipitocervical fusion. This paper will discuss the anaesthetic management and highlight the use of the Narcotrend monitor not only as a depth of consciousness monitor but more importantly as a tool to detect surgery-induced cerebral hypoperfusion by monitoring the right and left cerebral hemispheres independently and simultaneously., Competing Interests: Competing interests: None declared., (© BMJ Publishing Group Limited 2020. No commercial re-use. See rights and permissions. Published by BMJ.)
- Published
- 2020
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18. Atomic-Scale Metal-Insulator Transition in SrRuO 3 Ultrathin Films Triggered by Surface Termination Conversion.
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Lee HG, Wang L, Si L, He X, Porter DG, Kim JR, Ko EK, Kim J, Park SM, Kim B, Wee ATS, Bombardi A, Zhong Z, and Noh TW
- Abstract
The metal-insulator transition (MIT) in transition-metal-oxide is fertile ground for exploring intriguing physics and potential device applications. Here, an atomic-scale MIT triggered by surface termination conversion in SrRuO
3 ultrathin films is reported. Uniform and effective termination engineering at the SrRuO3 (001) surface can be realized via a self-limiting water-leaching process. As the surface termination converts from SrO to RuO2 , a highly insulating and nonferromagnetic phase emerges within the topmost SrRuO3 monolayer. Such a spatially confined MIT is corroborated by systematic characterizations on electrical transport, magnetism, and scanning tunneling spectroscopy. Density functional theory calculations and X-ray linear dichroism further suggest that the surface termination conversion breaks the local octahedral symmetry of the crystal field. The resultant modulation in 4d orbital occupancy stabilizes a nonferromagnetic insulating surface state. This work introduces a new paradigm to stimulate and tune exotic functionalities of oxide heterostructures with atomic precision., (© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2020
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19. LSD1 Inhibition Promotes Epithelial Differentiation through Derepression of Fate-Determining Transcription Factors.
- Author
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Egolf S, Aubert Y, Doepner M, Anderson A, Maldonado-Lopez A, Pacella G, Lee J, Ko EK, Zou J, Lan Y, Simpson CL, Ridky T, and Capell BC
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- 3T3 Cells, Adult, Animals, Binding Sites, Carcinoma, Squamous Cell pathology, Cell Line, Tumor, Epidermis metabolism, Epithelial Cells metabolism, Gene Expression Regulation, Genome, Human, Histone Demethylases metabolism, Histones metabolism, Humans, Lysine metabolism, Methylation, Mice, Protein Binding, Snail Family Transcription Factors metabolism, Transcription, Genetic, Cell Differentiation genetics, Cell Lineage genetics, Epithelial Cells cytology, Histone Demethylases antagonists & inhibitors, Transcription Factors metabolism
- Abstract
Self-renewing somatic tissues depend upon the proper balance of chromatin-modifying enzymes to coordinate progenitor cell maintenance and differentiation, disruption of which can promote carcinogenesis. As a result, drugs targeting the epigenome hold significant therapeutic potential. The histone demethylase, LSD1 (KDM1A), is overexpressed in numerous cancers, including epithelial cancers; however, its role in the skin is virtually unknown. Here we show that LSD1 directly represses master epithelial transcription factors that promote differentiation. LSD1 inhibitors block both LSD1 binding to chromatin and its catalytic activity, driving significant increases in H3K4 methylation and gene transcription of these fate-determining transcription factors. This leads to both premature epidermal differentiation and the repression of squamous cell carcinoma. Together these data highlight both LSD1's role in maintaining the epidermal progenitor state and the potential of LSD1 inhibitors for the treatment of keratinocyte cancers, which collectively outnumber all other cancers combined., (Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2019
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20. JAK/STAT signaling pathway gene expression is reduced following Nelf knockdown in GnRH neurons.
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Ko EK, Chorich LP, Sullivan ME, Cameron RS, and Layman LC
- Subjects
- Animals, Humans, Mice, Transgenic, Rats, Reproducibility of Results, Signal Transduction, Gene Expression Regulation, Gene Knockdown Techniques, Gonadotropin-Releasing Hormone metabolism, Janus Kinases metabolism, Neurons metabolism, STAT Transcription Factors metabolism, Transcription Factors metabolism
- Abstract
Hypothalamic gonadotropin releasing hormone (GnRH) is crucial for the proper function of the hypothalamic-pituitary-gonadal (HPG) axis, subsequent puberty, and reproduction. When GnRH neuron migration or GnRH regulation is impaired, hypogonadotropic hypogonadism results. Mutations in the gene for nasal embryonic luteinizing hormone-releasing factor (NELF) have been identified in GnRH-deficient humans. NELF is a predominantly nuclear protein that may participate in gene transcription, but the genes NELF regulates are unknown. To address this question, RNA was extracted from NLT GnRH neuronal cells following either stable Nelf knockdown or scrambled control and subjected to cDNA arrays. Transcription factors and cell migration gene expression was altered most commonly. Members of the Janus kinase/signal transducers and activators of transcription (JAK/STAT) pathway, including Stat1, Stat2, Stat5a, Jak2, Irf7 and Irf9, were significantly down regulated as assessed by RT-qPCR. Protein levels of STAT1, phospho-STAT1, and JAK2 were reduced, but the protein level of phospho-JAK2 was not. These findings suggest a role for NELF in the regulation of the JAK/STAT signaling pathway, which have important functions in GnRH neurons., (Copyright © 2017. Published by Elsevier B.V.)
- Published
- 2018
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21. Gut microbiota-associated bile acid deconjugation accelerates hepatic steatosis in ob/ob mice.
- Author
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Park MY, Kim SJ, Ko EK, Ahn SH, Seo H, and Sung MK
- Subjects
- Animals, Cholesterol 7-alpha-Hydroxylase genetics, Cholesterol 7-alpha-Hydroxylase metabolism, Disease Models, Animal, Fatty Liver enzymology, Fatty Liver genetics, Fatty Liver metabolism, Humans, Intestinal Mucosa metabolism, Lipid Metabolism, Liver enzymology, Liver metabolism, Male, Mice, Receptors, Cytoplasmic and Nuclear genetics, Receptors, Cytoplasmic and Nuclear metabolism, Bile Acids and Salts metabolism, Fatty Liver microbiology, Gastrointestinal Microbiome, Intestines microbiology
- Abstract
Aim: Nonalcoholic hepatic fat accumulation has been hypothesized to be associated with alterations in gut microbiota composition, although mechanistic explanations for this link are largely insufficient. The aim of this study was to elucidate the microbiota-driven mechanisms involved in the development of nonalcoholic hepatic steatosis., Methods and Results: Ob/ob mice and their wild-type lean control mice were fed an AIN-93G diet for 12 weeks. Faecal microbiota composition, faecal bile acid (BA) profile and intestinal and hepatic markers of BA metabolism were analysed. Ob/ob mice had significantly less faecal taurine-conjugated BAs compared to their lean controls. The proportions of butyrate-producing bacteria were lower in ob/ob mice compared to those in lean mice. Intestinal expression of farnesoid X receptor (FXR) mRNA was significantly higher, whereas hepatic expression of cholesterol-7α-hydroxylase 1 (CYP7A1) and small heterodimer partner (SHP) were significantly lower in ob/ob mice compared to those in control mice., Conclusion: Microbiota-associated BAs deconjugation may induce nonalcoholic fatty liver disease (NAFLD) by activating intestinal FXR signalling and blocking hepatic FXR-SHP pathway, thereby accelerating fat synthesis., Significance and Impact of the Study: We provided evidences that changes in the gut microbiota and their metabolites can alter the profile of BAs, thereby providing a mechanism by which an altered microbiota profile contributes to the development of NAFLD., (© 2016 The Society for Applied Microbiology.)
- Published
- 2016
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22. MicroRNAs are differentially deregulated in mammary malignant phyllodes tumour.
- Author
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Tsang JY, Ni YB, Ng EK, Shin VY, Mak KF, Go EM, Tawasil J, Chan SK, Ko CW, Kwong A, and Tse GM
- Subjects
- Biomarkers, Tumor genetics, Biomarkers, Tumor metabolism, Breast Neoplasms metabolism, Female, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Genes, Retinoblastoma, Genes, p16, Humans, MicroRNAs metabolism, PTEN Phosphohydrolase genetics, Phyllodes Tumor metabolism, RNA, Neoplasm metabolism, Breast Neoplasms genetics, Breast Neoplasms pathology, MicroRNAs genetics, Phyllodes Tumor genetics, Phyllodes Tumor pathology, RNA, Neoplasm genetics
- Abstract
Aims: MicroRNAs (miRs) have been shown to play important roles in tumour progression. Their expression pattern can be useful for cancer classification. However, little is known about miRs in mammary phyllodes tumours (PT)., Methods and Results: In this study, polymerase chain reaction (PCR)-based miR profiling was performed in a small PT cohort to identify deregulated miRs in malignant PT. The purported roles and targets of these miRs were further validated. Unsupervised clustering of miR expression profiling segregated PT into different grades, implicating the miR profile in PT classification. Among the deregulated miRs, miR-21, miR-335 and miR-155 were validated to be higher in malignant than in lower-grade PT in the independent cohort by quantitative PCR (qPCR) (P ≤ 0.032). Their expression correlated with some of the malignant histological features, including high stromal cellularity, nuclear pleomorphism and mitosis. Subsequent analysis of their downstream proteins, namely PTEN for miR-21/miR-155 and Rb for miR-335, also showed an independent significant negative association between miR and protein expression., Conclusions: Differential expression of miRs in PT could be useful in diagnosis and grading of PT. Their deregulated expression, together with the altered downstream targets, implicated their active involvement in PT malignant transformation., (© 2015 John Wiley & Sons Ltd.)
- Published
- 2015
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23. Antibiotic Resistance and Virulence Potentials of Shiga Toxin-Producing Escherichia coli Isolates from Raw Meats of Slaughterhouses and Retail Markets in Korea.
- Author
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Park HJ, Yoon JW, Heo EJ, Ko EK, Kim KY, Kim YJ, Yoon HJ, Wee SH, Park YH, and Moon JS
- Subjects
- Abattoirs, Animals, Bacterial Toxins genetics, Korea, O Antigens analysis, Polymerase Chain Reaction, Serotyping, Shiga-Toxigenic Escherichia coli classification, Shiga-Toxigenic Escherichia coli drug effects, Shiga-Toxigenic Escherichia coli genetics, Anti-Bacterial Agents pharmacology, Drug Resistance, Bacterial, Meat microbiology, Meat Products microbiology, Shiga-Toxigenic Escherichia coli isolation & purification, Virulence Factors genetics
- Abstract
In this study, the prevalence of Shiga toxin-producing Escherichia coli (STEC) was investigated among raw meat or meat products from slaughterhouses and retail markets in South Korea, and their potential for antibiotic resistance and virulence was further analyzed. A total of 912 raw meats, including beef, pork, and chicken, were collected from 2008 to 2009. E. coli strains were frequently isolated in chicken meats (176/233, 75.9%), beef (102/217, 42.3%), and pork (109/235, 39.2%). Putative STEC isolates were further categorized, based on the presence or absence of the Shiga toxin (stx) genes, followed by standard O-serotyping. Polymerase chain reaction assays were used to detect the previously defined virulence genes in STEC, including Shiga toxins 1 and Shiga toxin 2 (stx1 and 2), enterohemolysin (ehxA), intimin (eaeA), STEC autoagglutination adhesion (saa), and subtilase cytotoxin (subAB). All carried both stx1 and eae genes, but none of them had the stx2, saa, or subAB genes. Six (50.0%) STEC isolates possessed the ehxA gene, which is known to be encoded by the 60-megadalton virulence plasmid. Our antibiogram profiling demonstrated that some STEC strains, particularly pork and chicken isolates, displayed a multiple drug-resistance phenotype. RPLA analysis revealed that all the stx1-positive STEC isolates produced Stx1 only at the undetectable level. Altogether, these results imply that the locus of enterocyte and effacement (LEE)-positive strains STEC are predominant among raw meats or meat products from slaughterhouses or retail markets in Korea.
- Published
- 2015
- Full Text
- View/download PDF
24. NELF knockout is associated with impaired pubertal development and subfertility.
- Author
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Quaynor SD, Ko EK, Chorich LP, Sullivan ME, Demir D, Waller JL, Kim HG, Cameron RS, and Layman LC
- Subjects
- Animals, Cell Count, Cell Movement, Estrus genetics, Female, Gene Expression Regulation, Gonadotropin-Releasing Hormone biosynthesis, Gonadotropin-Releasing Hormone genetics, Homozygote, Humans, Hypothalamo-Hypophyseal System abnormalities, Hypothalamo-Hypophyseal System growth & development, Infertility physiopathology, Litter Size, Male, Mice, Mice, Knockout, Neurons pathology, Sexual Maturation genetics, Signal Transduction, Transcription Factors genetics, Uterus abnormalities, Uterus growth & development, Hypothalamo-Hypophyseal System metabolism, Infertility genetics, Neurons metabolism, Reproduction genetics, Transcription Factors deficiency, Uterus metabolism
- Abstract
Puberty and reproduction require proper signaling of the hypothalamic-pituitary-gonadal axis controlled by gonadotropin-releasing hormone (GnRH) neurons, which arise in the olfactory placode region and migrate along olfactory axons to the hypothalamus. Factors adversely affecting GnRH neuron specification, migration, and function lead to delayed puberty and infertility. Nasal embryonic luteinizing hormone-releasing factor (NELF) is a predominantly nuclear protein. NELF mutations have been demonstrated in patients with hypogonadotropic hypogonadism, but biallelic mutations are rare and heterozygous NELF mutations typically co-exist with mutations in another gene. Our previous studies in immortalized GnRH neurons supported a role for NELF in GnRH neuron migration. To better understand the physiology of NELF, a homozygous Nelf knockout (KO) mouse model was generated. Our findings indicate that female Nelf KO mice have delayed vaginal opening but no delay in time to first estrus, decreased uterine weight, and reduced GnRH neuron number. In contrast, male mice were normal at puberty. Both sexes of mice had impaired fertility manifested as reduced mean litter size. These data support that NELF has important reproductive functions. The milder than expected phenotype of KO mice also recapitulates the human phenotype since heterozygous NELF mutations usually require an additional mutation in a second gene to result in hypogonadotropic hypogonadism., (Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
25. Differential expression of nasal embryonic LHRH factor (NELF) variants in immortalized GnRH neuronal cell lines.
- Author
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Quaynor SD, Goldberg LY, Ko EK, Stanley RK, Demir D, Kim HG, Chorich LP, Cameron RS, and Layman LC
- Subjects
- Alternative Splicing, Animals, Cell Line, Transformed, Cell Movement, Cell Nucleus metabolism, Gonadotropin-Releasing Hormone metabolism, Humans, Mice, Neurons cytology, Nuclear Localization Signals, Protein Isoforms genetics, Protein Isoforms metabolism, RNA, Messenger metabolism, Signal Transduction, Species Specificity, Transcription Factors metabolism, Gene Expression Regulation, Neurons metabolism, RNA, Messenger genetics, Transcription Factors genetics
- Abstract
NELF, a protein identified in migratory GnRH neurons, is predominantly nuclear and alternatively spliced. However, specific NELF splice variants expressed in immortalized GnRH neuronal cell lines from mouse and human are not known. RNA from migratory (GN11 and NLT) and postmigratory (GT1-7) cells in mouse, and (FNCB4-hTERT) cells in human was subjected to RT-PCR. RT-PCR products were cloned, electrophoresed on denaturing gradient gels and sequenced. In addition, quantitative RT-PCR was performed using variant-specific primers. Western blot and immunofluorescence using confocal microscopy were performed for selected variants. Nelf variant 2 (v2), which contains a nuclear localization signal (NLS), was the predominant variant in all mouse and human GnRH neurons. Variants without a NLS (v3 in mouse; v4 in human) were identified. In mouse, v2 protein expression was nuclear, while v3 was non-nuclear. In mouse GnRH neurons, six Nelf splice variant transcripts were identified, including three previously unreported variants. In human, four NELF variant transcripts were observed. In both mouse and human, nuclear and non-nuclear variant transcript and protein were identified, explaining variable NELF cellular localization., (Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
26. Comparison of the Microsatellite and Single Nucleotide Polymorphism Methods for Discriminating among Hanwoo (Korean Native Cattle), Imported, and Crossbred Beef in Korea.
- Author
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Heo EJ, Ko EK, Seo KH, Chon JW, Kim YJ, Park HJ, Wee SH, and Moon JS
- Abstract
The identity of 45 Hanwo and 47 imported beef (non-Hanwoo) samples from USA and Australia were verified using the microsatellite (MS) marker and single nucleotide polymorphism (SNP) methods. Samples were collected from 19 supermarkets located in the city of Seoul and Gyeonggi province, South Korea, from 2009 to 2011. As a result, we obtained a 100% concordance rate between the MS and SNP methods for identifying Hanwoo and non-Hanwoo beef. The MS method presented a 95% higher individual discriminating value for Hanwoo (97.8%) than for non-Hanwoo (61.7%) beef. For further comparison of the MS and SNP methods, blood samples were collected and tested from 54 Hanwoo × Holstein crossbred cattle (first, second, and third generations). By using the SNP and MS methods, we correctly identified all of the first-generation crossbred cattle as non-Hanwoo; in addition, among the second and third generation crossbreds, the ratio identified as Hanwoo was 20% and 10%, respectively. The MS method used in our study provides more information, but requires sophisticated techniques during each experimental process. By contrast, the SNP method is simple and has a lower error rate. Our results suggest that the MS and SNP methods are useful for discriminating Hanwoo from non-Hanwoo breeds.
- Published
- 2014
- Full Text
- View/download PDF
27. The effectiveness of total surface bearing compared to specific surface bearing prosthetic socket design on health outcomes of adults with a trans-tibial amputation: A systematic review.
- Author
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Cavenett S, Aung EK, White S, and Streak J
- Published
- 2012
- Full Text
- View/download PDF
28. A microRNA contribution to aberrant Ras activation in gastric cancer.
- Author
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Lam EK, Wang X, Shin VY, Zhang S, Morrison H, Sun J, Ng EK, Yu J, and Jin H
- Abstract
Oncogenic Ras mutations are rare in gastric cancer, indicating that other mechanisms may be responsible for aberrant Ras activation in this type of cancer. Ezrin is critical to Ras activation by remodeling cortical actin cy-toskeleton. In this study, we aimed to illustrate the relevance and regulation of ezrin in gastric cancer. Ezrin was upregulated in gastric cancer cells. Ezrin siRNA inhibited Ras activation, cell growth and cell migration. Ezrin overex-pression was correlated with a poor outcome of gastric cancer patients (n=150, p<0.01). Cox regression analysis revealed a significant value of ezrin expression in prognosis prediction of gastric cancer (relative risk: 2.37, 95% confidence interval: 1.24-4.56, p<0.01). MiR-204, which was predicted to target ezrin, was downregulated in gastric cancer cells and gastric carcinomas (n=22, p<0.01). MiR-204 inhibited ezrin expression, Ras activation, cell growth and cell migration. Importantly, miR-204 suppressed the expression of luciferase controlled by wild-type but not mutated ezrin 3'-UTR. In conclusion, ezrin is important to Ras activation in gastric cancer. Its upregulation is an independent prognosis prediction factor for gastric cancer. By contributing to ezrin upregulation, miR-204 downregulation represents a novel mechanism for aberrant Ras activation in gastric carcinogenesis.
- Published
- 2011
29. Improvement of differentiation and mineralization of pre-osteoblasts on composite nanofibers of poly(lactic acid) and nanosized bovine bone powder.
- Author
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Ko EK, Jeong SI, Lee JH, and Shin H
- Subjects
- 3T3 Cells, Animals, Base Sequence, Cattle, DNA Primers, Materials Testing, Mice, Microscopy, Atomic Force, Microscopy, Electron, Scanning, Microscopy, Electron, Transmission, Polyesters, Powders, Reverse Transcriptase Polymerase Chain Reaction, Spectroscopy, Fourier Transform Infrared, Tissue Engineering, Bone and Bones chemistry, Calcification, Physiologic, Lactic Acid chemistry, Nanostructures, Osteoblasts chemistry, Polymers chemistry
- Abstract
The effect of NBM incorporation in PLA nanofibers on their mechanical properties and the differentiation and mineralization of osteoblasts was studied. At 20% NBM, the Young's modulus of the nanofibers was 37.78 +/- 4.23, significantly larger than that of pure PLA nanofibers. MC3T3-E1 pre-osteoblasts attached to both types of nanofibers and developed full osteogenic phenotypes. A profound effect of NBM on the mineralization of MC3T3-E1 pre-osteoblasts was confirmed, suggesting that NBM/PLA composite nanofibers exhibit properties similar to those of the native collagen-rich mineralized bone matrix, and could therefore serve as a temporary substrate for facilitating the differentiation and mineralization of bone-forming cells.
- Published
- 2008
- Full Text
- View/download PDF
30. In vitro osteogenic differentiation of human mesenchymal stem cells and in vivo bone formation in composite nanofiber meshes.
- Author
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Ko EK, Jeong SI, Rim NG, Lee YM, Shin H, and Lee BK
- Subjects
- Alkaline Phosphatase metabolism, Animals, Calcification, Physiologic, Cattle, Cell Shape, Cells, Cultured, Culture Media, Gene Expression Regulation, Humans, Lactic Acid metabolism, Male, Mandible cytology, Mesenchymal Stem Cells enzymology, Mesenchymal Stem Cells ultrastructure, Mice, Osteogenesis genetics, Polyesters, Polymers metabolism, Rats, Rats, Wistar, Spectrum Analysis, Surface Properties, X-Ray Microtomography, Cell Differentiation, Mesenchymal Stem Cells cytology, Nanostructures, Osteogenesis physiology, Tissue Scaffolds
- Abstract
Tissue engineering has become an alternative method to traditional surgical treatments for the repair of bone defects, and an appropriate scaffold supporting bone formation is a key element in this approach. In the present study, nanofibrous organic and inorganic composite scaffolds containing nano-sized demineralized bone powders (DBPs) with biodegradable poly(L-lactide) (PLA) were developed using an electrospinning process for engineering bone. To assess their biocompatibility, in vitro osteogenic differentiation of human mandible-derived mesenchymal stem cells (hMSCs) cultured on PLA or PLA/DBP composite nanofiber scaffolds were examined. The mineralization of hMSCs cultured with osteogenic supplements on the PLA/DBP nanofiber scaffolds was remarkably greater than on the PLA nanofiber scaffold during the first 14 days of culture but reached the same level after 21 days. The in vivo osteoconductive effect of PLA/DBP nanofibrous scaffolds was further investigated using rats with critical-sized skull defects. Micro-computerized tomography revealed that a greater amount of newly formed bone extended across the defect area in PLA/DBP scaffolds than in the nonimplant and PLA scaffolds 12 weeks after implantation and that the defect size was almost 90% smaller. Therefore, PLA/DBP composite nanofiber scaffolds may serve as a favorable matrix for the regeneration of bone tissue.
- Published
- 2008
- Full Text
- View/download PDF
31. Nanofibrous poly(lactic acid)/hydroxyapatite composite scaffolds for guided tissue regeneration.
- Author
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Jeong SI, Ko EK, Yum J, Jung CH, Lee YM, and Shin H
- Subjects
- 3T3 Cells, Animals, Cell Culture Techniques methods, Mice, Models, Biological, Spectroscopy, Fourier Transform Infrared, Stress, Mechanical, X-Ray Diffraction, Biomimetics, Biotechnology methods, Cell Culture Techniques instrumentation, Durapatite chemistry, Nanoparticles chemistry, Osteoblasts cytology, Osteoblasts metabolism, Regeneration, Tissue Engineering methods
- Abstract
The production of nanofibrous PLA/HA composite scaffolds is described. The morphological, mechanical, surface, and thermal properties of the composites were extensively investigated. The results show that the mixture of PLA and HA formed smooth nanofibers without lumps. The incorporation of HA increased the mechanical strength of the nanofibers and changed the morphology, increasing the mean fiber diameter and pore size. Surface and internal properties confirmed that HA was homogeneously distributed inside the nanofibers and oriented towards their surface. The nanofiber composites allowed the adhesion and proliferation of pre-osteoblasts for up to 3 weeks.
- Published
- 2008
- Full Text
- View/download PDF
32. In vitro protein tyrosine phosphatase 1B inhibitory phenols from the seeds of Psoralea corylifolia.
- Author
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Kim YC, Oh H, Kim BS, Kang TH, Ko EK, Han YM, Kim BY, and Ahn JS
- Subjects
- Dose-Response Relationship, Drug, Enzyme Inhibitors administration & dosage, Enzyme Inhibitors therapeutic use, Humans, Phenols administration & dosage, Phenols pharmacology, Phenols therapeutic use, Plant Extracts administration & dosage, Plant Extracts therapeutic use, Protein Tyrosine Phosphatase, Non-Receptor Type 1, Seeds, Enzyme Inhibitors pharmacology, Phytotherapy, Plant Extracts pharmacology, Protein Tyrosine Phosphatases antagonists & inhibitors, Psoralea
- Abstract
Protein tyrosine phosphatase 1B plays a major role in the negative regulation of insulin signaling, and this establishes protein tyrosine phosphatase 1B as an attractive therapeutic target for diabetes. Bioassay-guided fractionation of the EtOAc-soluble extract of the seeds of Psoralea corylifolia afforded two protein tyrosine phosphatase 1B inhibitory compounds, psoralidin (1) and bakuchiol (2), along with inactive corylin. Compounds 1 and 2 inhibited PTP1B activity in a dose-dependent manner, displaying IC50 values of 9.4 +/- 0.5 microM and 20.8 +/- 1.9 microM, respectively.
- Published
- 2005
- Full Text
- View/download PDF
33. Secoiridoid glucosides with free radical scavenging activity from the leaves of Syringa dilatata.
- Author
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Oh H, Ko EK, Kim DH, Jang KK, Park SE, Lee HS, and Kim YC
- Subjects
- Biphenyl Compounds, Chromatography, High Pressure Liquid, Humans, Inhibitory Concentration 50, Picrates chemistry, Plant Leaves, Free Radical Scavengers chemistry, Iridoids chemistry, Phytotherapy, Plant Extracts chemistry, Syringa
- Abstract
Activity-guided fractionation of the EtOAc and MeOH extract of the leaves of Syringa dilatata NAKAI furnished one free radical scavenger, the secoiridoid glucoside oleuropein together with ligstroside and an iridoid glucoside, syringopicroside. Oleuropein interacted with the stable free radical, 1,1-diphenyl-2-picrylhydrazyl (DPPH), and showed an IC(50) value of 40.4 microM. L-Ascorbic acid as a positive control showed an IC(50) value of 50.3 microM., (Copyright 2003 John Wiley & Sons, Ltd.)
- Published
- 2003
- Full Text
- View/download PDF
34. A study on 289 consecutive Korean patients with acute leukaemias revealed fluorescence in situ hybridization detects the MLL translocation without cytogenetic evidence both initially and during follow-up.
- Author
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Kim HJ, Cho HI, Kim EC, Ko EK, See CJ, Park SY, and Lee DS
- Subjects
- Acute Disease, Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Female, Follow-Up Studies, Histone-Lysine N-Methyltransferase, Humans, In Situ Hybridization, Fluorescence, Infant, Karyotyping, Leukemia diagnosis, Male, Middle Aged, Myeloid-Lymphoid Leukemia Protein, Neoplasm Proteins genetics, Biomarkers, Tumor genetics, Chromosomes, Human, Pair 11 genetics, DNA-Binding Proteins genetics, Leukemia genetics, Proto-Oncogenes, Transcription Factors, Translocation, Genetic
- Abstract
Translocations involving the MLL gene on the chromosome 11 (11q23) are frequently observed in acute leukaemia. The detection of this genetic change has a unique significance as a result of its implication of poor prognosis. To reveal the utility of fluorescence in situ hybridization (FISH) in detecting the MLL translocation, we analysed 289 consecutive Korean patients (children and adults) with acute leukaemias using both conventional cytogenetic analysis (CC) and FISH, placing an emphasis on the result discrepancies. Twenty-two of 289 patients (7.6%) had the 11q23/MLL translocation. In nine of 22 patients (41%), only FISH detected the translocation. In eight of these 22 patients, a total of 19 follow-up examinations were performed, of which FISH detected a significant level of leukaemic cells harbouring the MLL translocation in five patients (26%) without cytogenetic evidence. In addition to the MLL translocation, FISH detected submicroscopic amplification, partial deletion of the MLL gene and trisomy 11 in 12 patients without cytogenetic evidence. In summary, up to 41% of the MLL translocations at initial work-up and 26% during follow-up were detected by FISH without cytogenetic evidence. Thus, we recommend that MLL FISH should be performed in the diagnosis and monitoring of acute leukaemias in combination with CC.
- Published
- 2002
- Full Text
- View/download PDF
35. Hepatoprotective and free radical scavenging activities of prenylflavonoids, coumarin, and stilbene from Morus alba.
- Author
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Oh H, Ko EK, Jun JY, Oh MH, Park SU, Kang KH, Lee HS, and Kim YC
- Subjects
- Biphenyl Compounds, Cell Line drug effects, Coumarins administration & dosage, Coumarins pharmacology, Coumarins therapeutic use, Flavonoids administration & dosage, Flavonoids pharmacology, Flavonoids therapeutic use, Free Radical Scavengers administration & dosage, Free Radical Scavengers therapeutic use, Humans, Inhibitory Concentration 50, Picrates, Plant Extracts administration & dosage, Plant Extracts pharmacology, Plant Structures, Stilbenes administration & dosage, Stilbenes pharmacology, Stilbenes therapeutic use, Chemical and Drug Induced Liver Injury prevention & control, Free Radical Scavengers pharmacology, Morus, Phytotherapy
- Abstract
Chemical investigation of the EtOH extract of Morus alba L. (Moraceae), as guided by free radical scavenging activity, furnished 5,7-dihydroxycoumarin 7-methyl ether (1), two prenylflavones, cudraflavone B (2) and cudraflavone C (3), and oxyresveratrol (4). Compounds 1 and 4 showed superoxide scavenging effects with the IC(50) values of 19.1 +/- 3.6 and 3.81 +/- 0.5 microM, respectively. Compound 4 exhibited a DPPH free radical scavenging effect (IC(50) = 23.4 +/- 1.5 microM). Compounds 2 and 4 showed hepatoprotective effects with EC(50) values of 10.3 +/- 0.42 and 32.3 +/- 2.62 micro, respectively, on tacrine-induced cytotoxicity in human liver-derived Hep G2 cells.
- Published
- 2002
- Full Text
- View/download PDF
36. Predominance of trisomy 1q in myelodysplastic syndromes in Korea: is there an ethnic difference? A 3-year multi-center study.
- Author
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Lee DS, Kim SH, Seo EJ, Park CJ, Chi HS, Ko EK, Yoon BH, Kim WH, and Cho HI
- Subjects
- Humans, In Situ Hybridization, Fluorescence, Korea, Chromosomes, Human, Pair 1, Myelodysplastic Syndromes ethnology, Myelodysplastic Syndromes genetics, Trisomy
- Abstract
A predominance of total or partial chromosomal losses and the rarity of translocations are characteristics of myelodysplastic syndrome (MDS), and 5q,-5, -7 and +8 are known to be the most predominant chromosomal changes. To investigate whether the incidence and the pattern of chromosomal changes in MDS varies by location in Korea, we reviewed the cytogenetic results of 205 MDS cases from three medical centers. Distribution of MDS subtypes and the incidence of chromosomal aberration (44.8%) of MDS in Korea were similar to those found in other countries, however, their patterns were different. Translocations (40.4%) predominated over partial or total deletions (36.3%) in Korea. The most common abnormalities in MDS were trisomy 8, trisomy 1q, -5/5q-, and -7/7q-, which occurred in 18(19.5%), 14(15.2%), 12(13.0%), and 11(11.9%) patients, respectively. It is of note that trisomy 1q, which is rarely reported in hematologic malignancies, was the second most common change associated with MDS in Korea, and that structural anomalies of chromosomes 1(19.6%) exceeded that of chromosome 5(15.2%). The most common sole anomalies were trisomy 8(7.6%) and 14(78%) of 18 cases with chromosome 1 anomalies accompanied by other chromosomal abnormalities, suggesting that the changes of chromosome 1 may be evolutionary events rather than sporadic events. In conclusion, trisomy 1q and trisomy 8 predominate in Korean MDS, suggesting the likelihood of ethnic differences.
- Published
- 2002
- Full Text
- View/download PDF
37. [Antigenicity of the soluble egg antigen of Paragonimus westermani]
- Author
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Kim SI, Ko EK, Kang SY, and Cho SY
- Abstract
To evaluate the immature eggs of Paragonimus westermani as a source of diagnostic antigen, about a million eggs which were excreted by 104 adult worms were collected; their saline extract (soluble egg antigen; PwSEA) was prepared. The specific IgG and IgM antibody levels were observed in experimental dog paragonimiasis by micro-ELISA, using PwSEA as well as whole worm extract of 12 week-old P. westermani (PwWWE). The protein composition of the PwSEA was observed by disc-PAGE. The results could be summarized as follows: Specific IgG antibody to PwSEA began to increase on 8 weeks after the experimental infection; it maintained its high level until the observation period of 13 weeks. The levels of IgM antibody to PwSEA, however, did not show any significant change. Specific IgG antibody to PwWWE began to increase earlier from 2 weeks after the infection and continued to increase until the observation period of 13 weeks. Its level was much higher than that to PwSEA. Specific IgM antibody to PwWWE increased temporarily during 2-8 weeks after the infection. By disc-PAGE, PwSEA showed 2 protein bands of very low motility. The bands of PwSEA corresponded to the first and second bands in the electrophoretic pattern of PwWWE of the 12 week-old worms. The above results indicated that the PwSEA induced antibody production in dog paragonimiasis but its antigenicity was weaker than PwWWE to be used as a diagnostic antigen.
- Published
- 1986
- Full Text
- View/download PDF
38. Acupuncture.
- Author
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Ko EK
- Subjects
- Anesthesia, China, Deafness therapy, Humans, Male, Acupuncture Therapy
- Published
- 1973
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