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5. Diversification of Cynoglossinae genera (Cynoglosseae-Boraginaceae) in the western Irano--Turanian bioregion

Author

Sherafati, Mahboubeh, Kazempour-Osaloo, Shahrokh, Khoshsokhan-Mozaffar, Maryam, Kermani, Shokouh Esmailbegi, Staedler, Yannick M., and Manafzadeh, Sara

Subjects
Nucleotide sequencing -- Analysis -- Methods, DNA sequencing -- Analysis -- Methods, Phylogeny -- Analysis, Biogeography -- Analysis, Biological sciences
Abstract

The Irano--Turanian (I-T) bioregion harbours one of the Old World's greatest repositories of botanical diversity; however, the diversification patterns and the phenotypic evolution of its flora are sorely understudied. The subtribe Cynoglossinae is characteristic of the western I-T bioregion, species-rich in both the desertic lowlands and the more mesic highlands of the Iranian plateau. About 70 species of Cynoglossinae are present in the Iranian plateau, 47 of which are endemic to the plateau. Herein, nuclear internal transcribed spacer sequences as well as cpDNA rpl32-trnL and trnH--psbA sequences were used to investigate the molecular phylogeny, historical biogeography, and ancestral character states of Cynoglossinae. Molecular dating and ancestral range reconstruction analyses indicated that the subtribe Cynoglossinae has initiated its diversification from the eastern part of the western I-T during the mid-Miocene, concomitantly with the uplift of the Pamir and Hindu Kush mountains. Moreover, from the Pliocene onwards, the Afghan--India collision and extensive deformation of the Arabia--Eurasia convergence likely promoted allopatric speciation in Cynoglossinae via mostly vicariance events. Evolution of annuals with small nutlets from perennials with large nutlets was accompanied by mesic to desert habitat shifts. Herein, to explain distribution of Cynoglossinae in the western I-T, the congruence between cladogenetic, geological, and palaeoclimatic events was investigated. Key words: ancestral range reconstruction, Arabia--Eurasia collision, Cynoglossinae, Iranian plateau, molecular dating, nutlet. La biorégion irano--turanienne (I-T) abrite l'un des plus grands réservoirs de diversité botanique de l'Ancien Monde ; cependant, les patrons de diversification et l'évolution phénotypique de sa flore sont très peu étudiés. La sous-tribu des Cynoglossinae est caractéristique de la biorégion occidentale de l'I-T, riche en espèces tant dans les basses terres désertiques que dans les hautes terres plus mésiques du plateau iranien. Environ 70 espèces de Cynoglossinae sont présentes sur le plateau iranien, dont 47 sont endémiques au plateau. Dans ce document, les séquences d'espacement transcrites internes nucléaires et de l'ADNcp rpl32-trnL et trnH--psbA ont été utilisées pour étudier la phylogénie moléculaire, la biogéographie historique et les caractères ancestraux des Cynoglossinae. Les analyses de datation moléculaire et de reconstruction de l'aire de répartition ancestrale indiquaient que la sous-tribu Cynoglossinae a commencé sa diversification à partir de la partie orientale de l'I-T occidental au milieu du Miocène, en même temps que le soulèvement des montagnes Pamir et Hindu Kush. De plus, à partir du Pliocène, la collision entre l'Afghanistan et l'Inde et la déformation importante de la convergence Arabie-Eurasie ont probablement favorisé la spéciation allopatrique chez les Cynoglossinae, principalement par le biais d'événements de vicariance. L'évolution des annuelles à petites nucules à partir des vivaces à grosses nucules s'est accompagnée d'un passage d'habitats mésiques à désertiques. Pour expliquer la distribution des Cynoglossinae dans l'I-T occidental, la congruence entre les événements cladogéniques, géologiques et paléoclimatiques a été étudiée. [Traduit par la Rédaction] Mots-clés : reconstruction de l'aire de répartition ancestrale, collision Arabie--Eurasie, Cynoglossinae, plateau iranien, datation moléculaire, nucule., Introduction Flowering plants are one of life's most successful lineages; they both ecologically and evolutionarily dominate the Earth's terrestrial biomes (Anderson et al. 2011; Attar et al. 2011). The species [...]

Published
2021

9. Using leaf micromorphology to characterize Iranian species of Ribes (Grossulariaceae).

Author

Rezaee Chamanie, Kosar, Beygom Faghir, Marzieh, Mahmoodi, Mohammad, Kazempour Osaloo, Shahrokh, and Moradi, Aiuob

Subjects
PRINCIPAL components analysis, LEAF anatomy, CLUSTER analysis (Statistics), ELECTRON microscopes, MULTIVARIATE analysis
Abstract

This electron microscope study investigated the micromorphological characteristics of the leaf epidermis of 5 species (10 populations) of Ribes (Grossulariaceae) in Iran: R. biebersteinii, R. uva‐crispa, R. orientale, R. aureum, and R. khorasanicum. Samples were collected and identified, and the similarities between the species were evaluated using information from micromorphological traits of leaf epidermis and multivariate analysis (cluster analysis and principal component analysis). The traits useful for discriminating the species were presence or absence of hairs and glandular trichomes, presence or absence of granular with verrucae on hair surface, position of hairs on epidermal surface, hair location on the leaf (lamina, leaf margin, midrib), stomata shape, wax distribution on stomata, prominence and shape of anticlinal walls and outer periclinal layer, and epicuticular wax sculpturing. An identification key based on these leaf micromorphological characters is provided for Ribes species in Iran. The multivariate analysis of micromorphological traits was efficient for inter‐ and intra‐specific delimitation. The present findings correspond to a large extent with existing classifications. [ABSTRACT FROM AUTHOR]

Published
2024
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12. A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny

Author

Azani, Nasim, Babineau, Marielle, Bailey, C. Donovan, Banks, Hannah, Barbosa, Ariane R., Pinto, Rafael Barbosa, Boatwright, James S., Borges, Leonardo M., Brown, Gillian K., Bruneau, Anne, Candido, Elisa, Cardoso, Domingos, Chung, Kuo-Fang, Clark, Ruth P., Conceição, Adilva de S., Crisp, Michael, Cubas, Paloma, Delgado-Salinas, Alfonso, Dexter, Kyle G., Doyle, Jeff J., Duminil, Jérôme, Egan, Ashley N., Estrella, Manuel de la, Falcão, Marcus J., Filatov, Dmitry A., Fortuna-Perez, Ana Paula, Fortunato, Renée H., Gagnon, Edeline, Gasson, Peter, Rando, Juliana Gastaldello, de Azevedo Tozzi, Ana Maria Goulart, Gunn, Bee, Harris, David, Haston, Elspeth, Hawkins, Julie A., Herendeen, Patrick S., Hughes, Colin E., Iganci, João R.V., Javadi, Firouzeh, Kanu, Sheku Alfred, Kazempour-Osaloo, Shahrokh, Kite, Geoffrey C., Klitgaard, Bente B., Kochanovski, Fábio J., Koenen, Erik J.M., Kovar, Lynsey, Lavin, Matt, Roux, Marianne le, Lewis, Gwilym P., Lima, Haroldo C. de, López-Roberts, Maria Cristina, Mackinder, Barbara, Maia, Vitor Hugo, Malécot, Valéry, Mansano, Vidal F., Marazzi, Brigitte, Mattapha, Sawai, Miller, Joseph T., Mitsuyuki, Chika, Moura, Tania, Murphy, Daniel J., Nageswara-Rao, Madhugiri, Nevado, Bruno, Neves, Danilo, Ojeda, Dario I., Pennington, R. Toby, Prado, Darién E., Prenner, Gerhard, de Queiroz, Luciano Paganucci, Ramos, Gustavo, Filardi, Fabiana L. Ranzato, Ribeiro, Pétala G., Rico-Arce, María de Lourdes, Sanderson, Michael J., Santos-Silva, Juliana, São-Mateus, Wallace M.B., Silva, Marcos J.S., Simon, Marcelo F., Sinou, Carole, Snak, Cristiane, de Souza, Élvia R., Sprent, Janet, Steele, Kelly P., Steier, Julia E., Steeves, Royce, Stirton, Charles H., Tagane, Shuichiro, Torke, Benjamin M., Toyama, Hironori, da Cruz, Daiane Trabuco, Vatanparast, Mohammad, Wieringa, Jan J., Wink, Michael, Wojciechowski, Martin F., Yahara, Tetsukazu, Yi, Tingshuang, and Zimmerman, Erin

Published
2017

17. Onobrychis

Author

Hadadi, Anahita, Kaveh, Akram, Nafisi, Hanyieh, and Kazempour-Osaloo, Shahrokh

Subjects
Tracheophyta, Magnoliopsida, Onobrychis, Fabales, Fabaceae, Biodiversity, Plantae, Taxonomy
Abstract

Sect. Onobrychis (Sensu Amirahmadi et al. 2016) Type:—(designated by Hanelt 2001) Onobrychis viciifolia Scop. Subsect. Onobrychis emend Hadadi & Kaz. Osaloo ≡ Sect. Eubrychis Candolle. Prodr. 2: 344. 1825 Type:— Onobrychis viciifolia Scop. = Sect. Lophobrychis Hand.-Mazz., Osterr. Bot. Zeitschr. 59:373. 1909. Type:—(designated by Amirahmadi et al. 2016): O. caput-galli (L.) Lam. = Sect. Lophobrychis Hand.-Mazz. subsect. Occidentales Širj., SpisyPrˇ´ýr. Fak. Masarykovy Univ. 56:34. 1925. Type:—(designated by Amirahmadi et al. 2016): O. caput-galli (L.) Lam. Description: Perennial or rarely annual herbs, wing often shorter than calyx to as long as it, standard as long as a keel to slightly longer or shorter than it, the basic chromosome number x= 7, distributed in Central Asia to Europe with a south extension into N and NE Africa., Published as part of Hadadi, Anahita, Kaveh, Akram, Nafisi, Hanyieh & Kazempour-Osaloo, Shahrokh, 2023, Molecular phylogeny of Onobrychis sect. Onobrychis (Fabaceae-Hedysareae) with insights into its taxonomy and character evolution, pp. 196-216 in Phytotaxa 592 (3) on page 212, DOI: 10.11646/phytotaxa.592.3.2, http://zenodo.org/record/7850428, {"references":["Amirahmadi, A., Kazempour-Osaloo, S., Kaveh, A. & Maassoumi, A. A. (2016) The phylogeny and new classification of the genus Onobrychis (Fabaceae-Hedysareae): evidence from molecular data. Plant Systematics and Evolution 302: 1445 - 1456.","Hanelt P (ed.) (2001) Mansfeld's Encyclopedia of Agricultural and Horticultural Crops (Except Ornamentals). Vol. 2. Springer Verlag, Germany, pp. 541 - 1132. https: // doi. org / 10.1007 / 978 - 3 - 540 - 30442 - 5"]}

Published
2023
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18. Onobrychis (subsect. Macropterae) Hand. - Mazz

Author

Hadadi, Anahita, Kaveh, Akram, Nafisi, Hanyieh, and Kazempour-Osaloo, Shahrokh

Subjects
Tracheophyta, Magnoliopsida, Onobrychis, Fabales, Fabaceae, Biodiversity, Plantae, Taxonomy
Abstract

Subsect. Macropterae Hand.-Mazz. Osterr. Bot. Zeitschr. 59:424. 1909. emend Hadadi & Kaz. Osaloo Type:—(designated here): O. petraea (M.Bieb. ex Willd.) Fisch. = Sect. Dendrobrychis Candolle, Prodr. 2:347. 1825. Type:—(designated by Amirahmadi et al. 2016): O. cornuta (L.) Desv. = Sect. Dendrobrychis Candolle ser. DielsianaeSˇirj., Spisy Pr ˇ´ýr. Fak. Masarykovy Univ. 56:221925. Type:—(designated by Amirahmadi et al. 2016): O. cornuta (L.) Desv. = Sect. Lophobrychis Hand.-Mazz. subsect. Orientales Širj., Spisy Pr ˇ´ýr. Fak. Masarykovy Univ. 56:50. 1925. Type:—(designated by Amirahmadi et al. 2016): O. micrantha Schrenk Description: Perennial or annual herbs rarely subshrubs or forming a dense cushion armed with the spine-tipped peduncles; wings longer than calyx, a pod with flattened crest and semi-ovate to semiglobular, with 3–8 teeth (rarely without teeth) on the crest, discs with or without teeth or bristle; the basic chromosome number x= 8 or x= 7, often distributed in Central Asia, Iran, Anatolia, W Europe, N, and NE Africa., Published as part of Hadadi, Anahita, Kaveh, Akram, Nafisi, Hanyieh & Kazempour-Osaloo, Shahrokh, 2023, Molecular phylogeny of Onobrychis sect. Onobrychis (Fabaceae-Hedysareae) with insights into its taxonomy and character evolution, pp. 196-216 in Phytotaxa 592 (3) on page 212, DOI: 10.11646/phytotaxa.592.3.2, http://zenodo.org/record/7850428, {"references":["Amirahmadi, A., Kazempour-Osaloo, S., Kaveh, A. & Maassoumi, A. A. (2016) The phylogeny and new classification of the genus Onobrychis (Fabaceae-Hedysareae): evidence from molecular data. Plant Systematics and Evolution 302: 1445 - 1456."]}

Published
2023
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19. Acantholimon brevispicum(Plumbaginaceae) a New Species from Southeastern Iran Based on Morphological and Molecular Data

Author

Bibak, Hossein, Kazempour-Osaloo, Shahrokh, and Assadi, Mostafa

Abstract

Acantholimon brevispicumBibak, Kaz.Osaloo & Assadi (Plumbaginaceae) is described and illustrated as a new species from the Palvar Mountains, Kerman province, SE Iran. In this paper, we discuss morphological characteristics and molecular data that differentiate the species from closely related taxa. According to morphological characters, the new species belongs to the A. sect. Acantholimon(= Staticopsis) and closely related to A. hormozganenseand A. zaeifii, but is easily recognized by its leaves, flowering stem length, inflorescence, bracteole shape, and petal. Morphological comparisons and taxonomic relationships of A. brevispicumwith closely related taxa are discussed. Phylogenetic analysis was performed using maximum likelihood and Bayesian inference methods based on nrDNA ITS and plastid rpl32-trnL(UAG)markers. According to molecular and morphological evidence, the new species is distinct from its close relatives. The molecular phylogeny analyses support the placement of A. brevispicumbased on morphology. The information provided includes a species description, plant images, a diagnostic key, a distribution map, and a molecular phylogenetic tree.

Published
2024
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23. Tanacetum isfahanicum (Compositae-Anthemideae), a new species from Iran and its phylogenetic position based on nrDNA ITS data.

Author

NADERIFAR, Maryam, SONBOLI, Ali, and KAZEMPOUR OSALOO, Shahrokh

Subjects
SPECIES, ASTERACEAE, SECTS
Abstract

Tanacetum isfahanicum Sonboli and Naderifar (Compositae-Anthemideae) is described as a new species from Isfahan and Fars provinces of Iran. It belongs morphologically to Tanacetum sect. Xanthoglossa and differs from its the closest relative, T. polycephalum, by shape of basal and cauline leaves, shape of capitula, length and width of involucre and color of achene ribs. The phylogenetic position of the new species within the genus Tanacetum is established based on nrDNA ITS sequences variation and its close relationship with T. polycephalum is corroborated. [ABSTRACT FROM AUTHOR]

Published
2023
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24. Alchemilla L

Author

Shokatyari, Samira, Faghir, Marzieh Beygom, Kazempour-Osaloo, Shahrokh, and Sohani, Mohammad Mehdi

Subjects
Tracheophyta, Magnoliopsida, Biodiversity, Rosales, Plantae, Rosaceae, Alchemilla, Taxonomy
Abstract

IDENTIFICATION KEY OF THE SPECIES OF ALCHEMILLA L. BASED ON THE ACHENE MICROMORPHOLOGICAL CHARACTERS 1. Achene sculpturing colliculate or ruminate foveate-tuberculate (with rugose, folding or papillae); anticlinal wall depressed and outer periclinal layer raised................................................................................................... 2 — Achene sculpturing, reticulate falsifoveate with papillae, reticulate-foveate, reticulate-alveolate, ruminate reticulate-foveate-tuberculate, ruminate foveate-tuberculate, ruminate reticulate-tuberculate-lineolate; anticlinal wall raised-oblate and raised and outer periclinal layer depressed...................................................................... 14 2. Hilum position subbasal.............................................................................................................................. 3 — Hilum position basal and subbasal-lateral.................................................................................................... 9 3. Apex acute and acute curved....................................................................................................................... 4 — Apex blunt acuminate................................................................................................................................. 6 4. Apex acute................................................................................................................................................... 5 — Apex acute curved......................................................................................................... A. valdehirsuta Buser 5. Achene shape ovoid, epidermal cell shape long polygonal irregular............................... A. sedelmeyeriana Juz. — Achene shape broadly ovate, epidermal cell shape polygonal irregular....................... A. condensa S.E.Fröhner 6. Achene sculpturing ruminate foaveat-tuberculate........................................................ A. citrina S.E.Fröhner — Achene sculpturing colliculate..................................................................................................................... 7 7. Achene ovoid globose in shape, obtuse at the base............................................................. A. erythropoda Juz. — Achene ovoid in shape, ovoid at the base..................................................................................................... 8 8. Epidermal cell shape polygonal irregular, epidermal cell wall undulate............................... A. caucasica Buser — Epidermal cell shape polygonal, epidermal cell wall straight................................................. A. hessii Rothm. 9. Achene with blunt acuminate apex............................................................................................................ 10 — Achene with acute or acute curved apex.................................................................................................... 12 10. Epidermal cell shape polygonal irregular, epidermal cell wall undulate...................................................... 11 — Epidermal cell shape polygonal, epidermal cell wall straight..................................... A. fluminea S.E.Fröhner 11. Achene ovate-globose in shape and sculpturing colliculate with fine folding............................ A. rigida Buser — Achene ovate in shape and sculpturing colliculate with folding and papillae......................... A. sericata Rchb. 12. Achene with acute apex............................................................................................................................. 13 — Achene with acute curved apex................................................................................... A. hyrcana (Buser) Juz. 13. Hilum position basal, achene broadly ovate in shape, sculpturing colliculate with folding, epidermal cell shape long polygonal irregular, epidermal cell wall straight-slightly undulate............................... A. persica Rothm. — Hilum position subbasal-lateral, achene long ovate, sculpturing colliculate, with X-formed folding, epidermal cell shape triangular-rhomboidal irregular, epidermal cell wall straight................ A. microscopica S.E.Fröhner 14. Hilum position subbasal-lateral, apex acute or acute curved, ovoid or obtuse at the base........................... 15 — Hilum position subbasal, apex blunt acuminate, ovoid at the base............................................................. 17 15. Achene ovate and long ovate in shape, apex acute or acute curved, sculpturing ruminate reticulate-foveatetuberculate or ruminate reticulate-tuberculate........................................................................................... 16 — Achene ovate in shape, apex acute, sculpturing reticulate-foveate............................... A. pseudocartalinica Juz. 16. Achene ovate in shape, with irregular reticulate elevation on the surface, acute curved apex, epidermal cell shape polygonal irregular............................................................................................. A. melancholica S.E.Fröhner — Achene long ovate in shape, with ruminate lineate elevation on the surface, acute apex, epidermal cell shape polygonal......................................................................................................... A. kurdica Rothm. ex Bornm. 17. Achene obtuse at the base, epidermal cell shape polygonal........................................................................ 18 — Achene ovate or obtuse at base, epidermal cell shape rectangular polygonal............................................... 19 18. Achene tear-ovate in shape, apex acute, sculpturing reticulate-foveate..................... A. gigantodus S.E.Fröhner — Achene ovate-globose in shape, apex acute curved, sculpturing reticulate falsifoveate......... A. farinosa S.E.Fröhner 19. Achene ovoid at the base, apex blunt acuminate........................................................................................ 20 — Achene obtuse at the base, apex acute curved....................................................... A. plicatissima S.E.Fröhner 20. Achene sculpturing reticulate-foveate, outer periclinal layer raised-depressed, hilum 0.24 mm long............................................................................................................................................. A. pectiniloba S.E.Fröhner — Reticulate-alveolate, outer periclinal layer depressed, hilum length shorter than 0.2 mm....................................................................................................................................................................... A. rechingeri Rothm.

Published
2022
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29. Molecular phylogeny of Cousinia sections Albidae, Stenocephalae and Cousinia (Asteraceae): Systematic implications

Author

Tarbiat Modares University, Kalouti, Simin, Kazempour-Osaloo, Shahrokh, Attar, Farideh, Susanna de la Serna, Alfonso, Garcia-Jacas, Núria, Tarbiat Modares University, Kalouti, Simin, Kazempour-Osaloo, Shahrokh, Attar, Farideh, Susanna de la Serna, Alfonso, and Garcia-Jacas, Núria

Abstract

Cousinia sect. Stenocephalae is a mainly Iranian section of the genus and the second largest section of Cousinia after C. sect. Cynaroidae. Its members are mainly distributed in Iran. Using nrDNA ITS sequences, together with morphological evidence where possible, we tested the monophyly of C. sect. Stenocephalae as well as the related C. sect. Albidae and C. sect. Cousinia. We reconstructed phylogenetic relationships within these sections by performing a Bayesian analysis on a sample of 153 species of Cousinia, of which 49 species belong to the study sections. The analysis revealed that C. sect. Stenocephalae, Albidae and Cousinia are not monophyletic, which lays stress upon the need of a deep reexamination of the sectional classification in Cousinia using a different approach.

Published
2022

32. Additional file 1 of The complete chloroplast genome of Onobrychis gaubae (Fabaceae-Papilionoideae): comparative analysis with related IR-lacking clade species

Author

Moghaddam, Mahtab, Ohta, Atsushi, Shimizu, Motoki, Terauchi, Ryohei, and Kazempour-Osaloo, Shahrokh

Subjects
food and beverages
Abstract

Additional file 1: Table S1. Genes with intron in the O. gaubae chloroplast genome, including the exon and intron length. Table S2. Codon usage for O. gaubae chloroplast genome. Table S3. Codon usage for O. viciifolia chloroplast genome.

Published
2022
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33. Additional file 7 of The complete chloroplast genome of Onobrychis gaubae (Fabaceae-Papilionoideae): comparative analysis with related IR-lacking clade species

Author

Moghaddam, Mahtab, Ohta, Atsushi, Shimizu, Motoki, Terauchi, Ryohei, and Kazempour-Osaloo, Shahrokh

Subjects
food and beverages
Abstract

Additional file 7: Table S10. Prediction of RNA editing sites in chloroplast genes of O. gaubae. Table S11. Prediction of RNA editing sites in chloroplast genes of O. viciifolia.

Published
2022
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35. Additional file 3 of The complete chloroplast genome of Onobrychis gaubae (Fabaceae-Papilionoideae): comparative analysis with related IR-lacking clade species

Author

Moghaddam, Mahtab, Ohta, Atsushi, Shimizu, Motoki, Terauchi, Ryohei, and Kazempour-Osaloo, Shahrokh

Abstract

Additional file 3: Table S5. Forward, Reverse and Palindromic repeat sequences in the O. gaubae chloroplast genome. Table S6. Forward, Reverse and Palindromic repeat sequences in the O. viciifolia chloroplast genome. Table S7. Distribution of simple sequence repeat (SSR) in the O. gaubae chloroplast genome. Table S8. Distribution of simple sequence repeat (SSR) in the O. viciifolia chloroplast genome.

Published
2022
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43. A Taxonomic Revision of the Genus Hedysarum L. (Fabaceae-Hedysareae) in Iran

Author

Nafisi, Haniyeh, Kazempour-Osaloo, Shahrokh, Kaveh, Akram, and Mahmoodi, Mohammad

Subjects
Fabales, Fabaceae, Biodiversity, Plant Science, Biology, Tribe (biology), biology.organism_classification, Tracheophyta, Magnoliopsida, Genus, Botany, Molecular phylogenetics, Hedysarum, Type locality, Taxonomy (biology), Plantae, Eudicots, Ecology, Evolution, Behavior and Systematics, Taxonomy
Abstract

Hedysarum is the second largest genus of the tribe Hedysareae (Fabaceae), in Iran. Considering the rising number of species in Iran, a taxonomic revision of the genus is provided, except for a Hedysarum wrightianum group. As a complementary treatment, a diagnostic key to the species and detailed morphological descriptions are supplied. Based on the reliable molecular phylogeny and morphological evidence in the current study, the taxonomy of some species of H. subsect. Crinifera was re-examined. H. criniferum var. melanotrichum with 1-2 segmented, large, elliptic-semi ovate pods, is raised to the species rank as H. melanotrichum. Also, a new variety of H. atropatanum, (var. glabrum) with pods without setae, is introduced from the type locality. Furthermore, some species were synonymized including H. longipedunculatum with H. fallacinum, H. persicum with H. papillosum, H. orumiehense with H. criniferum, H. bojnordense with H. kopetdaghi, H. elbursense with H. hyrcanum as well as H. kalatense and H. johartchii with H. balchanense. According to the present study, the flora of Iran consists of H. armenium, a representative of H. sect. Hedysarum, and 31 species from H. sect. Multicaulia.

Published
2021
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49. A phylogenetic analysis of Bromus (Poaceae: Pooideae: Bromeae) based on nuclear ribosomal and plastid data, with a focus on Bromus sect. Bromus.

Author

Nasiri, Akram, Kazempour-Osaloo, Shahrokh, Hamzehee, Behnam, Bull, Roger D., and Saarela, Jeffery M.

Subjects
BROMEGRASSES, SECTS, DNA sequencing
Abstract

To investigate phylogenetic relationships among and within major lineages of Bromus, with focus on Bromus sect. Bromus, we analyzed DNA sequences from two nuclear ribosomal (ITS, ETS) and two plastid (rpl32-trnLUAG, matK) regions. We sampled 103 ingroup accessions representing 26 taxa of B. section Bromus and 15 species of other Bromus sections. Our analyses confirm the monophyly of Bromus s.l. and identify incongruence between nuclear ribosomal and plastid data partitions for relationships within and among major Bromus lineages. Results support classification of B. pumilio and B. gracillimus within B. sect. Boissiera and B. sect. Nevskiella, respectively. These species are sister groups and are closely related to B. densus (B. sect. Mexibromus) in nrDNA trees and Bromus sect. Ceratochloa in plastid trees. Bromus sect. Bromopsis is paraphyletic. In nrDNA trees, species of Bromus sects. Bromopsis, Ceratochloa, Neobromus, and Genea plus B. rechingeri of B. sect. Bromus form a clade, in which B. tomentellus is sister to a B. sect. Genea-B. rechingeri clade. In the plastid trees, by contrast, B. sect. Bromopsis species except B. tomentosus form a clade, and B. tomentosus is sister to a clade comprising B. sect. Bromus and B. sect. Genea species. Affinities of B. gedrosianus, B. pulchellus, and B. rechingeri (members of the B. pectinatus complex), as well as B. oxyodon and B. sewerzowii, are discordant between nrDNA and plastid trees. We infer these species may have obtained their plastomes via chloroplast capture from species of B. sect. Bromus and B. sect. Genea. Within B. sect. Bromus, B. alopecuros subsp. caroli-henrici, a clade comprising B. hordeaceus and B. interruptus, and B. scoparius are successive sister groups to the rest of the section in the nrDNA phylogeny. Most relationships among the remaining species of B. sect. Bromus are unresolved in the nrDNA and plastid trees. Given these results, we infer that most B. sect. Bromus species likely diversified relatively recently. None of the subdivisional taxa proposed for Bromus sect. Bromus over the last century correspond to natural groups identified in our phylogenetic analyses except for a group including B. hordeaceus and B. interruptus. [ABSTRACT FROM AUTHOR]

Published
2022
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50. What is 'Astragalus wiesneri'? Disentangling a new species from its relatives in section 'Anthylloidei'

Author

Pahlevani, Amir Hossein, Maassoumi, Ali-Asghar, Kazempour Osaloo, Shahrokh, Pahlevani, Amir Hossein, Maassoumi, Ali-Asghar, and Kazempour Osaloo, Shahrokh

Abstract

Here, we describe and illustrate a new alpine species of Astragalus sect. Anthylloidei from Iran. Astragalus wiesneri sp. nov., an interesting and rare species, is only known from the type locality in the Bul Mountain (near Eghlid city) in the southern Zagros Mountains. The new species is compared with close relatives, including A.nigrohirsutus and A. lalesarensis, which are also endemic to Iran. In addition, we assembled a dataset of nrDNA ITS sequences of 21 species (22 accessions) representing A. sect. Anthylloidei and ten species ofother related spiny-cushion forming sections. Maximum likelihoodmethods and Bayesian Inference retrieved A. wiesneri sister toA.nigrohirsutus, a species growing in the same area as the new species.The description of A. wiesneri is presented along with a distributionmap, some ecological information, field images, conservation status,and pertinent notes, Se describe e ilustra una nueva especie alpina de Irán, perteneciente a Astragalus sect. Anthylloidei. Astragaluswiesneri sp. nov., una especie hasta ahora desconocida, crece en las zonas altas del Monte Bul al sur de los Montes Zagros. La nueva especie se comparó con especies afines incluyendo A. nigrohirsutus y A. lalesarensis, también endémicas de Irán. Además del examen morfológico, se construyó una matriz de datos moleculares representando 21 especies (22 especímenes) de A. sect. Anthylloidei y 10especies de otras secciones del género que incluyen arbustos almohadillados espinosos. Se realizaron análisis filogenéticos de secuencias de la región ITS del ADN ribosómico nuclear. Los análisis moleculares indican que A.wiesneri es hermana de A. nigrohirsutus, unaespecie con la que vive en simpatría. La descripción morfológica de A.wiesneri va acompañada de un mapa de distribución, información ecológica, imágenes de campo, estado de conservación y comentarios relevantes

Published
2020

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