110 results on '"Katja Lakota"'
Search Results
2. Deregulation in adult IgA vasculitis skin as the basis for the discovery of novel serum biomarkers
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Matija Bajželj, Matjaž Hladnik, Rok Blagus, Vesna Jurčić, Ana Markež, Tanya Deniz Toluay, Snežna Sodin-Šemrl, Alojzija Hočevar, and Katja Lakota
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IgA vasculitis ,Adults ,RNA sequencing ,Lipid metabolism ,Acute inflammatory response ,Serum biomarkers ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Introduction Immunoglobulin A vasculitis (IgAV) in adults has a variable disease course, with patients often developing gastrointestinal and renal involvement and thus contributing to higher mortality. Due to understudied molecular mechanisms in IgAV currently used biomarkers for IgAV visceral involvement are largely lacking. Our aim was to search for potential serum biomarkers based on the skin transcriptomic signature. Methods RNA sequencing analysis was conducted on skin biopsies collected from 6 treatment-naïve patients (3 skin only and 3 renal involvement) and 3 healthy controls (HC) to get insight into deregulated processes at the transcriptomic level. 15 analytes were selected and measured based on the transcriptome analysis (adiponectin, lipopolysaccharide binding protein (LBP), matrix metalloproteinase-1 (MMP1), C-C motif chemokine ligand (CCL) 19, kallikrein-5, CCL3, leptin, C-X-C motif chemokine ligand (CXCL) 5, osteopontin, interleukin (IL)-15, CXCL10, angiopoietin-like 4 (ANGPTL4), SERPIN A12/vaspin, IL-18 and fatty acid-binding protein 4 (FABP4)) in sera of 59 IgAV and 22 HC. Machine learning was used to assess the ability of the analytes to predict IgAV and its organ involvement. Results Based on the gene expression levels in the skin, we were able to differentiate between IgAV patients and HC using principal component analysis (PCA) and a sample-to-sample distance matrix. Differential expression analysis revealed 49 differentially expressed genes (DEGs) in all IgAV patient’s vs. HC. Patients with renal involvement had more DEGs than patients with skin involvement only (507 vs. 46 DEGs) as compared to HC, suggesting different skin signatures. Major dysregulated processes in patients with renal involvement were lipid metabolism, acute inflammatory response, and extracellular matrix (ECM)-related processes. 11 of 15 analytes selected based on affected processes in IgAV skin (osteopontin, LBP, ANGPTL4, IL-15, FABP4, CCL19, kallikrein-5, CCL3, leptin, IL-18 and MMP1) were significantly higher (p-adj
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- 2024
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3. Disturbed Antioxidant Capacity in Patients with Systemic Sclerosis Associates with Lung and Gastrointestinal Symptoms
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Neža Brezovec, Katja Perdan-Pirkmajer, Blaž Burja, Žiga Rotar, Joško Osredkar, Snežna Sodin-Šemrl, Katja Lakota, and Saša Čučnik
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systemic sclerosis ,oxidative stress ,reactive oxidative metabolites ,antioxidants ,lipid peroxidation ,DNA damage ,Biology (General) ,QH301-705.5 - Abstract
The correct balance between reactive oxygen species and antioxidant defense in an organism is disturbed in oxidative stress. To assess oxidative balance in 36 SSc patients and 26 healthy controls (HCs), we measured reactive oxidative metabolites (ROMs), total antioxidant capacity (TAC), lipid peroxidation (measuring 4-HNE), and DNA oxidative damage (measuring 8-OHdG) in serum. Furthermore, DNA breaks in leukocytes of 35 SSc patients and 32 HCs were evaluated using COMET. While we report high ROMs for both SSc patients and age/sex matched HC samples, there was a significant increase in TAC in SSc patients as compared to HCs, and thus also a significantly higher oxidative stress index in SSc patients. TAC was significantly higher in SSc patients with ILD and gastrointestinal involvement, as well as in patients with anti-topoisomerase antibodies. We observe no difference in serum lipid peroxidation status or oxidative DNA damage. However, SSc patients had significantly more leukocyte DNA breaks than HCs; the most damage was observed in patients treated with immunosuppressives. Thus, our study confirms presence of oxidative stress and increased DNA damage in leukocytes of SSc patients; however, it points toward increased antioxidant capacity, which needs to be further studied.
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- 2023
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4. Correlation of the High-Resolution Computed Tomography Patterns of Intrathoracic Sarcoidosis with Serum Levels of SAA, CA 15.3, SP-D, and Other Biomarkers of Interstitial Lung Disease
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Zala Leštan Ramovš, Snežna Sodin-Šemrl, Katja Lakota, Saša Čučnik, Damjan Manevski, Rok Zbačnik, Mirjana Zupančič, Martin Verbič, and Marjeta Terčelj
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intrathoracic sarcoidosis ,biomarker ,HRCT ,Scadding stage ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Studies on the serum biomarkers of granulomatous inflammation and pulmonary interstitial disease in intrathoracic sarcoidosis have shown conflicting results. We postulated that differences in the concentrations of serum biomarkers can be explained by the heterogenous patterns of sarcoidosis seen on thoracic HRCT. Serum biomarker levels in 79 consecutive patients, newly diagnosed with intrathoracic sarcoidosis, were compared to our control group of 56 healthy blood donors. An analysis was performed with respect to HRCT characteristics (the presence of lymph node enlargement, perilymphatic or peribronchovascular infiltrates, ground-glass lesions, or fibrosis), CXR, and disease extent. Serum levels of CXCL9, CXCL10, CTO, and CCL18 were statistically significantly increased in all patients compared to controls. Serum levels of CA15.3 were statistically significantly increased in all patients with parenchymal involvement. SAA was increased in patients with ground-glass lesions while SP-D levels were statistically significantly increased in patients with lung fibrosis. Only SP-D and CA15.3 showed a significant correlation to interstitial disease extent. In conclusion, we found that sarcoidosis patients with different HRCT patterns of intrathoracic sarcoidosis have underlying biochemical differences in their serum biomarkers transcending Scadding stages. The stratification of patients based on both radiologic and biochemical characteristics could enable more homogenous patient selection for further prognostic studies.
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- 2023
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5. Molecular Profiling of Inflammatory Processes in a Mouse Model of IC/BPS: From the Complete Transcriptome to Major Sex-Related Histological Features of the Urinary Bladder
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Dominika Peskar, Tadeja Kuret, Katja Lakota, and Andreja Erman
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interstitial cystitis/bladder pain syndrome ,inflammation ,RNA sequencing ,animal model ,cyclophosphamide ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Animal models are invaluable in the research of the pathophysiology of interstitial cystitis/bladder pain syndrome (IC/BPS), a chronic aseptic urinary bladder disease of unknown etiology that primarily affects women. Here, a mouse model of IC/BPS was induced with multiple low-dose cyclophosphamide (CYP) applications and thoroughly characterized by RNA sequencing, qPCR, Western blot, and immunolabeling to elucidate key inflammatory processes and sex-dependent differences in the bladder inflammatory response. CYP treatment resulted in the upregulation of inflammatory transcripts such as Ccl8, Eda2r, and Vegfd, which are predominantly involved in innate immunity pathways, recapitulating the crucial findings in the bladder transcriptome of IC/BPS patients. The JAK/STAT signaling pathway was analyzed in detail, and the JAK3/STAT3 interaction was found to be most activated in cells of the bladder urothelium and lamina propria. Sex-based data analysis revealed that cell proliferation was more pronounced in male bladders, while innate immunity and tissue remodeling processes were the most distinctive responses of female bladders to CYP treatment. These processes were also reflected in prominent histological changes in the bladder. The study provides an invaluable reference dataset for preclinical research on IC/BPS and an insight into the sex-specific mechanisms involved in the development of IC/BPS pathology, which may explain the more frequent occurrence of this disease in women.
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- 2023
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6. Differences in SARS-CoV-2-Specific Antibody Responses After the First, Second, and Third Doses of BNT162b2 in Naïve and Previously Infected Individuals: A 1-Year Observational Study in Healthcare Professionals
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Manca Ogrič, Polona Žigon, Eva Podovšovnik, Katja Lakota, Snezna Sodin-Semrl, Žiga Rotar, and Saša Čučnik
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COVID-19 ,SARS-CoV-2 ,BNT162b2 vaccine ,anti-S antibody dynamics ,healthcare professionals ,humoral immune response ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundSafe and effective vaccines against COVID-19 are critical for preventing the spread of SARS-CoV-2, but little is known about the humoral immune response more than 9 months after vaccination. We aimed to assess the humoral immune response after the first, second, and third (booster) doses of BNT162b2 vaccine in SARS-CoV-2 naïve and previously infected healthcare professionals (HCP) and the humoral immune response after infection in vaccinated HCP.MethodsWe measured anti-spike (anti-S) and anti-nucleocapsid antibodies at different time points up to 12 months in the sera of 300 HCP who had received two or three doses of BNT162b2 vaccine. Mixed-model analyses were used to assess anti-S antibody dynamics and to determine their predictors (age, sex, BMI, and previous infection).ResultsNaïve individuals had statistically lower anti-S antibody concentrations after the first dose (median 253 BAU/ml) than previously infected individuals (median 3648 BAU/ml). After the second dose, anti-S antibody concentrations increased in naïve individuals (median 3216 BAU/ml), whereas the second dose did not significantly increase concentrations in previously infected individuals (median 4503 BAU/ml). The third dose resulted in an additional increase in concentrations (median 4844 BAU/ml in naïve and median 5845 BAU/ml in previously infected individuals). Anti-S antibody concentrations steadily decreased after the second dose and after the third dose in naïve and previously infected individuals. In addition, we found that age had an effect on the humoral immune response. Younger individuals had higher anti-S antibody concentrations after the first and second doses. After infection with the new variant Omicron, a further increase in anti-S antibody concentrations to a median value of 4794 BAU/ml was observed in three times vaccinated HCP whose anti-S antibody concentrations were relatively high before infection (median 2141 BAU/ml). Our study also showed that individuals with systemic adverse events achieved higher anti-S antibody concentrations.ConclusionIn this study, significant differences in humoral immune responses to BNT162b2 vaccine were observed between naïve and previously infected individuals, with age playing an important role, suggesting that a modified vaccination schedule should be practiced in previously infected individuals. In addition, we showed that the high anti-S antibodies were not protective against new variants of SARS-CoV-2.
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- 2022
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7. An Optimized Tissue Dissociation Protocol for Single-Cell RNA Sequencing Analysis of Fresh and Cultured Human Skin Biopsies
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Blaž Burja, Dominique Paul, Aizhan Tastanova, Sam G. Edalat, Reto Gerber, Miranda Houtman, Muriel Elhai, Kristina Bürki, Ramon Staeger, Gaetana Restivo, Ramon Lang, Snezna Sodin-Semrl, Katja Lakota, Matija Tomšič, Mitchell P. Levesque, Oliver Distler, Žiga Rotar, Mark D. Robinson, and Mojca Frank-Bertoncelj
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scRNAseq ,skin tissue ,skin biopsy ,ex vivo explants ,protocol ,Biology (General) ,QH301-705.5 - Abstract
We present an optimized dissociation protocol for preparing high-quality skin cell suspensions for in-depth single-cell RNA-sequencing (scRNA-seq) analysis of fresh and cultured human skin. Our protocol enabled the isolation of a consistently high number of highly viable skin cells from small freshly dissociated punch skin biopsies, which we use for scRNA-seq studies. We recapitulated not only the main cell populations of existing single-cell skin atlases, but also identified rare cell populations, such as mast cells. Furthermore, we effectively isolated highly viable single cells from ex vivo cultured skin biopsy fragments and generated a global single-cell map of the explanted human skin. The quality metrics of the generated scRNA-seq datasets were comparable between freshly dissociated and cultured skin. Overall, by enabling efficient cell isolation and comprehensive cell mapping, our skin dissociation-scRNA-seq workflow can greatly facilitate scRNA-seq discoveries across diverse human skin pathologies and ex vivo skin explant experimentations.
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- 2022
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8. Titanium Dioxide Nanotube Arrays for Cardiovascular Stent Applications
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Ita Junkar, Mukta Kulkarni, Metka Benčina, Janez Kovač, Katjuša Mrak-Poljšak, Katja Lakota, Snežna Sodin-Šemrl, Miran Mozetič, and Aleš Iglič
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Chemistry ,QD1-999 - Published
- 2020
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9. DES-Amyloidoses 'Amyloidoses through the looking-glass': A knowledgebase developed for exploring and linking information related to human amyloid-related diseases
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Vladan P. Bajic, Adil Salhi, Katja Lakota, Aleksandar Radovanovic, Rozaimi Razali, Lada Zivkovic, Biljana Spremo-Potparevic, Mahmut Uludag, Faroug Tifratene, Olaa Motwalli, Benoit Marchand, Vladimir B. Bajic, Takashi Gojobori, Esma R. Isenovic, and Magbubah Essack
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Medicine ,Science - Abstract
More than 30 types of amyloids are linked to close to 50 diseases in humans, the most prominent being Alzheimer’s disease (AD). AD is brain-related local amyloidosis, while another amyloidosis, such as AA amyloidosis, tends to be more systemic. Therefore, we need to know more about the biological entities’ influencing these amyloidosis processes. However, there is currently no support system developed specifically to handle this extraordinarily complex and demanding task. To acquire a systematic view of amyloidosis and how this may be relevant to the brain and other organs, we needed a means to explore "amyloid network systems" that may underly processes that leads to an amyloid-related disease. In this regard, we developed the DES-Amyloidoses knowledgebase (KB) to obtain fast and relevant information regarding the biological network related to amyloid proteins/peptides and amyloid-related diseases. This KB contains information obtained through text and data mining of available scientific literature and other public repositories. The information compiled into the DES-Amyloidoses system based on 19 topic-specific dictionaries resulted in 796,409 associations between terms from these dictionaries. Users can explore this information through various options, including enriched concepts, enriched pairs, and semantic similarity. We show the usefulness of the KB using an example focused on inflammasome-amyloid associations. To our knowledge, this is the only KB dedicated to human amyloid-related diseases derived primarily through literature text mining and complemented by data mining that provides a novel way of exploring information relevant to amyloidoses.
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- 2022
10. From Active to Non-active Giant Cell Arteritis: Longitudinal Monitoring of Patients on Glucocorticoid Therapy in Combination With Leflunomide
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Tadeja Kuret, Mojca Frank-Bertoncelj, Katja Lakota, Polona Žigon, Gerhard G. Thallinger, Andreja N. Kopitar, Saša Čučnik, Matija Tomšič, Alojzija Hočevar, and Snežna Sodin-Šemrl
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giant cell arteritis ,glucocorticoids ,leflunomide ,follow-up ,biomarkers ,disease monitoring ,Medicine (General) ,R5-920 - Abstract
In the present study, we longitudinally monitored leukocyte subsets, expression of neutrophil surface adhesion molecules (CD62L and CD11b) and serum analytes in therapy-naïve patients with active giant cell arteritis (GCA). We collected blood samples at the baseline, and at weeks 1, 4, 12, 24, and 48 of follow-up, and evaluated short- and long-term effects of glucocorticoids (GC) vs. GC and leflunomide. Our aim was to identify candidate biomarkers that could be used to monitor disease activity and predict an increased risk of a relapse. Following high doses of GC, the numbers of CD4+ T-lymphocytes and B-lymphocytes transiently increased and then subsided when GC dose tapering started at week 4. In contrast, the numbers of neutrophils significantly increased during the follow-up time of 12 weeks compared to pre-treatment time. Neutrophil CD62L rapidly diminished after initiation of GC therapy, however its expression remained low at week 48, only in patients under combinatorial therapy with leflunomide. Levels of acute phase reactant SAA and IL-6 decreased significantly after treatment with GC and leflunomide, while levels of IL-8, IL-18, and CHI3L1 did not change significantly during the follow-up period. CHI3L1 was associated with signs of transmural inflammation and vessel occlusion and might therefore serve as a marker of fully developed active GCA, and a promising therapeutic target. Patients with relapses had higher levels of IL-23 at presentation than patients without relapses (p = 0.021). Additionally, the levels of IL-23 were higher at the time of relapse compared to the last follow-up point before relapse. IL-23 might present a promising biomarker of uncontrolled and active disease and could give early indication of upcoming relapses.
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- 2022
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11. Longitudinal Analysis of Antiphospholipid Antibody Dynamics after Infection with SARS-CoV-2 or Vaccination with BNT162b2
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Manca Ogrič, Polona Žigon, Snezna Sodin-Semrl, Mirjana Zlatković-Švenda, Marija Zdravković, Milica Ovuka, Tinka Švec, Katja Lakota, Peter Radšel, Žiga Rotar, and Saša Čučnik
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COVID-19 ,SARS-CoV-2 ,BNT162b2 vaccine ,autoantibodies ,antiphospholipid antibodies ,healthcare professionals ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Antiphospholipid antibodies (aPL) comprise a group of autoantibodies that reflect prothrombotic risk in antiphospholipid syndrome (APS) but may also be present in a small proportion of healthy individuals. They are often transiently elevated in infections, including SARS-CoV-2, and may also be associated with vaccine-induced autoimmunity. Therefore, we aimed to investigate the dynamics of aPL in COVID-19 patients and in individuals (healthcare professionals—HCPs) after receiving BNT162b2 vaccine and to compare aPL levels and positivity with those found in APS patients. We measured solid-phase identifiable aPL, including anticardiolipin (aCL), anti-β2 glycoprotein I (anti-β2GPI), and anti-prothrombin/phosphatidylserine (aPS/PT) antibodies in 58 HCPs before and after vaccination (at 3 weeks, 3, 6, and 9 months after the second dose, and 3 weeks after the third booster dose), in 45 COVID-19 patients hospitalized in the ICU, in 89 COVID-19 patients hospitalized in the non-ICU (at admission, at hospital discharge, and at follow-up), and in 52 patients with APS. The most frequently induced aPL in COVID-19 patients (hospitalized in non-ICU) were aCL (50.6% of patients had positive levels at at least one time point), followed by anti-β2GPI (21.3% of patients had positive levels at at least one time point). In 9/89 COVID-19 patients, positive aPL levels persisted for three months. One HCP developed aCL IgG after vaccination but the persistence could not be confirmed, and two HCPs developed persistent anti-β2GPI IgG after vaccination with no increase during a 1-year follow-up period. Solid-phase aPL were detected in 84.6% of APS patients, in 49.4% of COVID-19 patients hospitalized in the non-ICU, in 33.3% of COVID-19 patients hospitalized in the ICU, and in only 17.2% of vaccinated HCPs. aPL levels and multiple positivity were significantly lower in both infected groups and in vaccinated individuals compared with APS patients. In conclusion, BNT162b2 mRNA vaccine may have induced aPL in a few individuals, whereas SARS-CoV-2 infection itself results in a higher percentage of aPL induction, but the levels, persistence, and multiple positivity of aPL do not follow the pattern observed in APS.
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- 2022
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12. Molecular and Cellular Markers in Chlorhexidine-Induced Peritoneal Fibrosis in Mice
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Neža Brezovec, Nika Kojc, Andreja Erman, Matjaž Hladnik, Jošt Stergar, Matija Milanič, Matija Tomšič, Saša Čučnik, Snežna Sodin-Šemrl, Martina Perše, and Katja Lakota
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chlorhexidine gluconate ,peritoneal fibrosis ,mouse model ,inflammation ,complement ,Biology (General) ,QH301-705.5 - Abstract
Understanding the tissue changes and molecular mechanisms of preclinical models is essential for creating an optimal experimental design for credible translation into clinics. In our study, a chlorhexidine (CHX)-induced mouse model of peritoneal fibrosis was used to analyze histological and molecular/cellular alterations induced by 1 and 3 weeks of intraperitoneal CHX application. CHX treatment for 1 week already caused injury, degradation, and loss of mesothelial cells, resulting in local inflammation, with the most severe structural changes occurring in the peritoneum around the ventral parts of the abdominal wall. The local inflammatory response in the abdominal wall showed no prominent differences between 1 and 3 weeks. We observed an increase in polymorphonuclear cells in the blood but no evidence of systemic inflammation as measured by serum levels of serum amyloid A and interleukin-6. CHX-induced fibrosis in the abdominal wall was more pronounced after 3 weeks, but the gene expression of fibrotic markers did not change over time. Complement system molecules were strongly expressed in the abdominal wall of CHX-treated mice. To conclude, both histological and molecular changes were already present in week 1, allowing examination at the onset of fibrosis. This is crucial information for refining further experiments and limiting the amount of unnecessary animal suffering.
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- 2022
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13. COVID-19 in Association With Development, Course, and Treatment of Systemic Autoimmune Rheumatic Diseases
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Katja Lakota, Katja Perdan-Pirkmajer, Alojzija Hočevar, Snezna Sodin-Semrl, Žiga Rotar, Saša Čučnik, and Polona Žigon
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COVID-19 ,systemic autoimmune rheumatic diseases ,autoantibodies ,antiphospholipid antibodies ,pediatric multisystem inflammatory syndrome in children ,incidence ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Autoimmune diseases and infections are often closely intertwined. Patients with autoimmune diseases are more susceptible to infections due to either active autoimmune disease or the medications used to treat them. Based on infections as environmental triggers of autoimmunity, an autoimmune response would also be expected in COVID-19. Although some studies have shown the occurance of autoantibodies and the possible development of autoimmune diseases after SARS-CoV-2 infection, current data suggest that the levels of autoantibodies following SARS-CoV-2 infection is comparable to that of some other known infections and that the autoantibodies might only be transient. The risk of SARS-CoV-2 infection in patients with a systemic autoimmune rheumatic disease (SARD) appears slightly higher compared to the general population and the course of COVID-19 disease does not seem to be very different, however, specific therapies such as glucocorticoids and anti-TNF might modulate the risk of hospitalization/death. Cytokine release syndrome is a severe complication in COVID-19. Many drugs used for the treatment of SARD are directly or indirectly targeting cytokines involved in the cytokine release syndrome, therefore it has been suggested that they could also be effective in COVID-19, but more evidence on the use of these medications for the treatment of COVID-19 is currently being collected.
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- 2021
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14. Increased L-Selectin on Monocytes Is Linked to the Autoantibody Profile in Systemic Sclerosis
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Neža Brezovec, Katja Perdan-Pirkmajer, Tadeja Kuret, Blaž Burja, Snežna Sodin-Šemrl, Saša Čučnik, and Katja Lakota
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systemic sclerosis ,monocytes ,adhesion ,chemotaxis ,CD62L ,CCR2 ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Monocytes are known to be implicated in the pathogenesis of systemic sclerosis (SSc), as they exert prominent migratory, adhesive, and chemotactic properties. The aim of our study was to characterize the surface expression of adhesion/chemotactic molecules (CD62L, CD11b, CCR2, CCR5) on the SSc monocytes and determine correlations with the clinical presentation of SSc. We included 38 SSc patients and 36 healthy age-and sex-matched controls. Isolated monocytes, as well as in vitro serum-treated monocytes, were analyzed by flow cytometry; additionally, soluble CD62L was measured in serum. We found increased soluble CD62L in the SSc serum samples and increased CD62L on the surface of the SSc monocytes in the in the same set of patients. Among samples with determined SSc-specific autoantibodies, the surface CD62L was the lowest in patients positive for anti-PM/Scl autoantibodies and the highest in patients with anti-topoisomerase I autoantibodies (ATA). The treatment of isolated healthy monocytes with ATA-positive SSc serum resulted in increased surface CD62L expression. Moreover, surface CCR5 was reduced on the monocytes from SSc patients with interstitial lung disease but also, along with CCR2, negatively correlated with the use of analgesics/anti-inflammatory drugs and immunosuppressants. In conclusion, increased CD62L on SSc monocytes, particularly in ATA-positive patients, provides new insights into the pathogenesis of SSc and suggests CD62L as a potential therapeutic target.
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- 2022
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15. Bio-Performance of Hydrothermally and Plasma-Treated Titanium: The New Generation of Vascular Stents
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Metka Benčina, Niharika Rawat, Katja Lakota, Snežna Sodin-Šemrl, Aleš Iglič, and Ita Junkar
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cardiovascular disease ,metallic stents ,hydrothermal treatment ,non-thermal plasma treatment ,TiO2 ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The research presented herein follows an urgent global need for the development of novel surface engineering techniques that would allow the fabrication of next-generation cardiovascular stents, which would drastically reduce cardiovascular diseases (CVD). The combination of hydrothermal treatment (HT) and treatment with highly reactive oxygen plasma (P) allowed for the formation of an oxygen-rich nanostructured surface. The morphology, surface roughness, chemical composition and wettability of the newly prepared oxide layer on the Ti substrate were characterized by scanning electron microscopy (SEM) with energy-dispersive X-ray analysis (EDX), atomic force microscopy (AFM), X-ray photoelectron spectroscopy (XPS) and water contact angle (WCA) analysis. The alteration of surface characteristics influenced the material’s bio-performance; platelet aggregation and activation was reduced on surfaces treated by hydrothermal treatment, as well as after plasma treatment. Moreover, it was shown that surfaces treated by both treatment procedures (HT and P) promoted the adhesion and proliferation of vascular endothelial cells, while at the same time inhibiting the adhesion and proliferation of vascular smooth muscle cells. The combination of both techniques presents a novel approach for the fabrication of vascular implants, with superior characteristics.
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- 2021
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16. Dysregulated Expression of Arterial MicroRNAs and Their Target Gene Networks in Temporal Arteries of Treatment-Naïve Patients with Giant Cell Arteritis
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Tadeja Kuret, Katja Lakota, Saša Čučnik, Vesna Jurčič, Oliver Distler, Žiga Rotar, Alojzija Hočevar, Snežna Sodin-Šemrl, and Mojca Frank-Bertoncelj
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giant cell arteritis ,microRNA ,microRNA-target genes ,arterial remodelling ,toll-like receptor signaling ,arterial ultrasound ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
In this study, we explored expression of microRNA (miR), miR-target genes and matrix remodelling molecules in temporal artery biopsies (TABs) from treatment-naïve patients with giant cell arteritis (GCA, n = 41) and integrated these analyses with clinical, laboratory, ultrasound and histological manifestations of GCA. NonGCA patients (n = 4) served as controls. GCA TABs exhibited deregulated expression of several miRs (miR-21-5p, -145-5p, -146a-5p, -146b-5p, -155-5p, 424-3p, -424-5p, -503-5p), putative miR-target genes (YAP1, PELI1, FGF2, VEGFA, KLF4) and matrix remodelling factors (MMP2, MMP9, TIMP1, TIPM2) with key roles in Toll-like receptor signaling, mechanotransduction and extracellular matrix biology. MiR-424-3p, -503-5p, KLF4, PELI1 and YAP1 were identified as new deregulated molecular factors in GCA TABs. Quantities of miR-146a-5p, YAP1, PELI1, FGF2, TIMP2 and MMP9 were particularly high in histologically positive GCA TABs with occluded temporal artery lumen. MiR-424-5p expression in TABs and the presence of facial or carotid arteritis on ultrasound were associated with vision disturbances in GCA patients. Correlative analysis of miR-mRNA quantities demonstrated a highly interrelated expression network of deregulated miRs and mRNAs in temporal arteries and identified KLF4 as a candidate target gene of deregulated miR-21-5p, -146a-5p and -155-5p network in GCA TABs. Meanwhile, arterial miR and mRNA expression did not correlate with constitutive symptoms and signs of GCA, elevated markers of systemic inflammation nor sonographic characteristics of GCA. Our study provides new insights into GCA pathophysiology and uncovers new candidate biomarkers of vision impairment in GCA.
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- 2021
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17. Adiponectin is an endogenous anti-fibrotic mediator and therapeutic target
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Roberta G. Marangoni, Yuri Masui, Feng Fang, Benjamin Korman, Gabriel Lord, Junghwa Lee, Katja Lakota, Jun Wei, Philipp E. Scherer, Laszlo Otvos, Toshimasa Yamauchi, Naoto Kubota, Takashi Kadowaki, Yoshihide Asano, Shinichi Sato, Warren G. Tourtellotte, and John Varga
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Medicine ,Science - Abstract
Abstract Skin fibrosis in systemic sclerosis (SSc) is accompanied by attrition of dermal white adipose tissue (dWAT) and reduced levels of circulating adiponectin. Since adiponectin has potent regulatory effects on fibroblasts, we sought to assess adiponectin signaling in SSc skin biopsies, and evaluate fibrosis in mice with adiponectin gain- and loss-of-function mutations. Furthermore, we investigated the effects and mechanism of action of agonist peptides targeting adiponectin receptors in vitro and in vivo. We found that adiponectin pathway activity was significantly reduced in a subset of SSc skin biopsies. Mice lacking adiponectin mounted an exaggerated dermal fibrotic response, while transgenic mice with constitutively elevated adiponectin showed selective dWAT expansion and protection from skin and peritoneal fibrosis. Adiponectin receptor agonists abrogated ex vivo fibrotic responses in explanted normal and SSc fibroblasts and in 3D human skin equivalents, in part by attenuating focal adhesion complex assembly, and prevented and reversed experimentally-induced organ fibrosis in mice. These results implicate aberrant adiponectin pathway activity in skin fibrosis, identifying a novel function for this pleiotropic adipokine in regulation of tissue remodeling. Restoring adiponectin signaling in SSc patients therefore might represent an innovative pharmacological strategy for intractable organ fibrosis.
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- 2017
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18. Olive Leaf Extract Attenuates Inflammatory Activation and DNA Damage in Human Arterial Endothelial Cells
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Blaž Burja, Tadeja Kuret, Tea Janko, Dijana Topalović, Lada Živković, Katjuša Mrak-Poljšak, Biljana Spremo-Potparević, Polona Žigon, Oliver Distler, Saša Čučnik, Snezna Sodin-Semrl, Katja Lakota, and Mojca Frank-Bertoncelj
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OLE ,SAA ,HCAEC ,inflammation ,atherosclerosis ,microRNA ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Olive leaf extract (OLE) is used in traditional medicine as a food supplement and as an over-the-counter drug for a variety of its effects, including anti-inflammatory and anti-atherosclerotic ones. Mechanisms through which OLE could modulate these pathways in human vasculature remain largely unknown. Serum amyloid A (SAA) plays a causal role in atherosclerosis and cardiovascular diseases and induces pro-inflammatory and pro-adhesive responses in human coronary artery endothelial cells (HCAEC). Within this study we explored whether OLE can attenuate SAA-driven responses in HCAEC. HCAEC were treated with SAA (1,000 nM) and/or OLE (0.5 and 1 mg/ml). The expression of adhesion molecules VCAM-1 and E-selectin, matrix metalloproteinases (MMP2 and MMP9) and microRNA 146a, let-7e, and let-7g (involved in the regulation of inflammation) was determined by qPCR. The amount of secreted IL-6, IL-8, MIF, and GRO-α in cell culture supernatants was quantified by ELISA. Phosphorylation of NF-κB was assessed by Western blot and DNA damage was measured using the COMET assay. OLE decreased significantly released protein levels of IL-6 and IL-8, as well as mRNA expression of E-selectin in SAA-stimulated HCAEC and reduced MMP2 levels in unstimulated cells. Phosphorylation of NF-κB (p65) was upregulated in the presence of SAA, with OLE significantly attenuating this SAA-induced effect. OLE stabilized SAA-induced upregulation of microRNA-146a and let-7e in HCAEC, suggesting that OLE could fine-tune the SAA-driven activity of NF-κB by changing the microRNA networks in HCAEC. SAA induced DNA damage and worsened the oxidative DNA damage in HCAEC, whereas OLE protected HCAEC from SAA- and H2O2-driven DNA damage. OLE significantly attenuated certain pro-inflammatory and pro-adhesive responses and decreased DNA damage in HCAEC upon stimulation with SAA. The reversal of SAA-driven endothelial activation by OLE might contribute to its anti-inflammatory and anti-atherogenic effects in HCAEC.
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- 2019
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19. Adiponectin Deregulation in Systemic Autoimmune Rheumatic Diseases
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Neža Brezovec, Katja Perdan-Pirkmajer, Saša Čučnik, Snežna Sodin-Šemrl, John Varga, and Katja Lakota
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adiponectin ,systemic autoimmune rheumatic diseases ,therapy ,gene regulation ,interleukin 6 ,tumor necrosis factor α ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Deregulation of adiponectin is found in systemic autoimmune rheumatic diseases (SARDs). Its expression is downregulated by various inflammatory mediators, but paradoxically, elevated serum levels are present in SARDs with high inflammatory components, such as rheumatoid arthritis and systemic lupus erythematosus. Circulating adiponectin is positively associated with radiographic progression in rheumatoid arthritis as well as with cardiovascular risks and lupus nephritis in systemic lupus erythematosus. However, in SARDs with less prominent inflammation, such as systemic sclerosis, adiponectin levels are low and correlate negatively with disease activity. Regulators of adiponectin gene expression (PPAR-γ, Id3, ATF3, and SIRT1) and inflammatory cytokines (interleukin 6 and tumor necrosis factor α) are differentially expressed in SARDs and could therefore influence total adiponectin levels. In addition, anti-inflammatory therapy could also have an impact, as tocilizumab treatment is associated with increased serum adiponectin. However, anti-tumor necrosis factor α treatment does not seem to affect its levels. Our review provides an overview of studies on adiponectin levels in the bloodstream and other biological samples from SARD patients and presents some possible explanations why adiponectin is deregulated in the context of therapy and gene regulation.
- Published
- 2021
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20. Tenascin-C drives persistence of organ fibrosis
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Swati Bhattacharyya, Wenxia Wang, Luisa Morales-Nebreda, Gang Feng, Minghua Wu, Xiaodong Zhou, Robert Lafyatis, Jungwha Lee, Monique Hinchcliff, Carol Feghali-Bostwick, Katja Lakota, G. R. Scott Budinger, Kirtee Raparia, Zenshiro Tamaki, and John Varga
- Subjects
Science - Abstract
Systemic sclerosis (SSc) is a fibrotic disease affecting multiple organs. Here the authors use patient samples plus mouse studies to show a central role for tenascin C as a TLR4 activator responsible for persistence of fibrosis in the context of SSc and SSc-like disease.
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- 2016
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21. Does the Urothelium of Old Mice Regenerate after Chitosan Injury as Quickly as the Urothelium of Young Mice?
- Author
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Eva Erzar, Mojca Kerec Kos, Katja Lakota, Peter Veranič, and Andreja Erman
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urothelium ,young mice ,old mice ,chitosan ,regeneration ,inflammation ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The aging of organisms leads to a decreased ability of tissue to regenerate after injury. The regeneration of the bladder urothelium after induced desquamation with biopolymer chitosan has been studied in young mice but not in old mice. Chitosan is a suitable inducer of urothelial desquamation because it is known to be non-toxic. We used chitosan for desquamation of urothelial cells in order to compare the dynamics of urothelial regeneration after injury between young and old mice. Our aim was to determine whether the urothelial function and structure of old mice is restored as fast as in young mice, and to evaluate the inflammatory response due to chitosan treatment. We discovered that the urothelial function restored comparably fast in both age groups and that the urothelium of young and old mice recovered within 5 days after injury, although the onset of proliferation and differentiation appeared later in old mice. Acute inflammation markers showed some differences in the inflammatory response in young versus old mice, but in both age groups, chitosan caused short-term acute inflammation. In conclusion, the restoration of urothelial function is not impaired in old mice, but the regeneration of the urothelial structure in old mice slightly lags behind the regeneration in young mice.
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- 2020
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22. Zgodnji gigantocelični arteritis
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Blaž Burja, Alojzija Hočevar, Snežna Sodin Šemrl, Katja Lakota, Žiga Rotar, Rok Ješe, Polona Žigon, Saša Čučnik, Suchita Nadkarni, Mauro Peretti, Sonja Praprotnik, and Matija Tomšič
- Subjects
zgodnji gigantocelični arteritis ,biomarkerji ,tarčno zdravljenje ,celični fenotip ,T-celice ,Medicine - Abstract
Gigantocelični arteritis (GCA) je najpogostejši primarni sistemski vaskulitis pri odraslih po 50. letu starosti v Evropi. Prizadene velike in srednje velike arterije in vnetni proces, ki zožuje ali popolnoma zapre svetlino žile, lahko dovede do hudih/trajnih ishemičnih zapletov kot so oslepitev, možganska kap ali miokardni infarkt. V zadnjem desetletju se je z vključitvijo slikovnih preiskav v diagnostični postopek pomembno skrajšal čas do prepoznave bolezni (t.i. zgodnji GCA). Pospešena obravnava bolnikov (ang. “fast track clinic”) je vodila v zmanjšanje pojavnosti najresnejših ishemičnih zapletov bolezni in znižanje stroškov zdravljenja. Vendar pa bolezen praviloma poteka kronično, s poslabšanji, kar skupaj s kroničnim glukokortikoidnem zdravljenjem vodi v kopičenje okvar organov in tkiv. Prav zato se intenzivno preučuje patogeneza bolezni, z možnostjo implementacije izsledkov kot so sodobne molekularno in celično usmerjene tarčne terapije. Glavni cilji našega preglednega članka so bili: a) analiza raziskav z navedenim časom trajanja od začetka simptomov do postavitve diagnoze, b) raziskava obetavnih molekularnih tarč za zdravljenje GCA in c) prepoznava klinično pomembnih celičnih podtipov. Najbolj obetavne tarčne molekule za tarčno zdravljenje so IL-6, IL-12/IL-23 in citototoksični z limfociti T povezan protein 4, medtem ko terapija z zaviralci TNF-α ni bila uspešna. Kliničnih raziskav z učinkovinami, usmerjenimi proti IL-17, še ni. V prispevku pa smo se dotaknili tudi drugih potencialnih terapevtskih tarč, vključno z molekulami, ki sodelujejujo v signalnih poteh.
- Published
- 2018
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23. Naturally occurring antibodies against serum amyloid A reduce IL-6 release from peripheral blood mononuclear cells.
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Tadeja Kuret, Katja Lakota, Polonca Mali, Saša Čučnik, Sonja Praprotnik, Matija Tomšič, and Snezna Sodin-Semrl
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Medicine ,Science - Abstract
Serum amyloid A (SAA) is a sensitive inflammatory marker rapidly increased in response to infection, injury or trauma during the acute phase. Resolution of the acute phase and SAA reduction are well documented, however the exact mechanism remains elusive. Two inducible SAA proteins, SAA1 and SAA2, with their variants could contribute to systemic inflammation. While unconjugated human variant SAA1α is already commercially available, the variants of SAA2 are not. Antibodies against SAA have been identified in apparently healthy blood donors (HBDs) in smaller, preliminary studies. So, our objective was to detect anti-SAA and anti-SAA1α autoantibodies in the sera of 300 HBDs using ELISA, characterize their specificity and avidity. Additionally, we aimed to determine the presence of anti-SAA and anti-SAA1α autoantibodies in intravenous immunoglobulin (IVIg) preparations and examine their effects on released IL-6 from SAA/SAA1α-treated peripheral blood mononuclear cells (PBMCs). Autoantibodies against SAA and SAA1α had a median (IQR) absorbance OD (A450) of 0.655 (0.262-1.293) and 0.493 (0.284-0.713), respectively. Both anti-SAA and anti-SAA1α exhibited heterogeneous to high avidity and reached peak levels between 41-50 years, then diminished with age in the oldest group (51-67 years). Women consistently exhibited significantly higher levels than men. Good positive correlation was observed between anti-SAA and anti-SAA1α. Both anti-SAA and anti-SAA1α were detected in IVIg, their fractions subsequently isolated, and shown to decrease IL-6 protein levels released from SAA/SAA1α-treated PBMCs. In conclusion, naturally occurring antibodies against SAA and anti-SAA1α could play a physiological role in down-regulating their antigen and proinflammatory cytokines leading to the resolution of the acute phase and could be an important therapeutic option in patients with chronic inflammatory diseases.
- Published
- 2018
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24. Improved Protective Effect of Umbilical Cord Stem Cell Transplantation on Cisplatin-Induced Kidney Injury in Mice Pretreated with Antithymocyte Globulin
- Author
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Željka Večerić-Haler, Andreja Erman, Anton Cerar, Helena Motaln, Katja Kološa, Tamara Lah Turnšek, Snežna Sodin Šemrl, Katja Lakota, Katjuša Mrak-Poljšak, Špela Škrajnar, Simona Kranjc, Miha Arnol, and Martina Perše
- Subjects
Internal medicine ,RC31-1245 - Abstract
Mesenchymal stem cells (MSCs) are recognised as a promising tool to improve renal recovery in experimental models of cisplatin-induced acute kidney injury. However, these preclinical studies were performed on severely immunodeficient animals. Here, we investigated whether human umbilical cord derived MSC treatment could equally ameliorate acute kidney injury induced by cisplatin and prolong survival in mice with a normal immune system and those with a suppressed immune system by polyclonal antithymocyte globulin (ATG). We demonstrated that ATG pretreatment, when followed by MSC transplantation, significantly improved injured renal function parameters, as evidenced by decreased blood urea nitrogen and serum creatinine concentration, as well as improved renal morphology. This tissue restoration was also supported by increased survival of mice. The beneficial effects of ATG were associated with reduced level of inflammatory protein serum amyloid A3 and induced antioxidative expression of superoxide dismutase-1 (SOD-1), glutathione peroxidase (GPx), and hem oxygenase-1 (HO-1). Infused MSCs became localised predominantly in peritubular areas and acted to reduce renal cell death. In conclusion, these results show that ATG diminished in situ inflammation and oxidative stress associated with cisplatin-induced acute kidney injury, the effects that may provide more favourable microenvironment for MSC action, with consequential synergistic improvements in renal injury and animal survival as compared to MSC treatment alone.
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- 2016
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25. Serum amyloid A is a marker for pulmonary involvement in systemic sclerosis.
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Katja Lakota, Mary Carns, Sofia Podlusky, Katjusa Mrak-Poljsak, Monique Hinchcliff, Jungwha Lee, Matija Tomsic, Snezna Sodin-Semrl, and John Varga
- Subjects
Medicine ,Science - Abstract
Inflammation in systemic sclerosis (SSc) is a prominent, but incompletely characterized feature in early stages of the disease. The goal of these studies was to determine the circulating levels, clinical correlates and biological effects of the acute phase protein serum amyloid A (SAA), a marker of inflammation, in patients with SSc. Circulating levels of SAA were determined by multiplex assays in serum from 129 SSc patients and 98 healthy controls. Correlations between SAA levels and clinical and laboratory features of disease were analyzed. The effects of SAA on human pulmonary fibroblasts were studied ex vivo. Elevated levels of SAA were found in 25% of SSc patients, with the highest levels in those with early-stage disease and diffuse cutaneous involvement. Significant negative correlations of SAA were found with forced vital capacity and diffusion capacity for carbon monoxide. Patients with elevated SAA had greater dyspnea and more frequent interstitial lung disease, and had worse scores on patient-reported outcome measures. Incubation with recombinant SAA induced dose-dependent stimulation of IL-6 and IL-8 in normal lung fibroblasts in culture. Serum levels of the inflammatory marker SAA are elevated in patients with early diffuse cutaneous SSc, and correlate with pulmonary involvement. In lung fibroblasts, SAA acts as a direct stimulus for increased cytokine production. These findings suggest that systemic inflammation in SSc may be linked to lung involvement and SAA could serve as a potential biomarker for this complication.
- Published
- 2015
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26. Uteroglobin, a Possible Ligand of the Lipoxin Receptor Inhibits Serum Amyloid A-Driven Inflammation
- Author
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Giovanni Antico, Monica Aloman, Katja Lakota, Lucio Miele, Stefano Fiore, and Snezna Sodin-Semrl
- Subjects
Pathology ,RB1-214 - Published
- 2014
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27. Uropathogenic Escherichia coli induces serum amyloid a in mice following urinary tract and systemic inoculation.
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Andreja Erman, Katja Lakota, Katjusa Mrak-Poljsak, Matthew G Blango, Veronika Krizan-Hergouth, Matthew A Mulvey, Snezna Sodin-Semrl, and Peter Veranic
- Subjects
Medicine ,Science - Abstract
Serum amyloid A (SAA) is an acute phase protein involved in the homeostasis of inflammatory responses and appears to be a vital host defense component with protective anti-infective properties. SAA expression remains poorly defined in many tissues, including the urinary tract which often faces bacterial challenge. Urinary tract infections (UTIs) are usually caused by strains of uropathogenic Escherichia coli (UPEC) and frequently occur among otherwise healthy individuals, many of whom experience bouts of recurrent and relapsing infections despite the use of antibiotics. To date, whether SAA is present in the infected urothelium and whether or not the induction of SAA can protect the host against UPEC is unclear. Here we show, using mouse models coupled with immunofluorescence microscopy and quantitative RT-PCR, that delivery of UPEC either directly into the urinary tract via catheterization or systemically via intraperitoneal injection triggers the expression of SAA. As measured by ELISA, serum levels of SAA1/2 were also transiently elevated in response to UTI, but circulating SAA3 levels were only up-regulated substantially following intraperitoneal inoculation of UPEC. In in vitro assays, physiological relevant levels of SAA1/2 did not affect the growth or viability of UPEC, but were able to block biofilm formation by the uropathogens. We suggest that SAA functions as a critical host defense against UTIs, preventing the formation of biofilms both upon and within the urothelium and possibly providing clinicians with a sensitive serological marker for UTI.
- Published
- 2012
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28. Increased Responsiveness of Human Coronary Artery Endothelial Cells in Inflammation and Coagulation
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Katja Lakota, Katjusa Mrak-Poljsak, Blaz Rozman, and Snezna Sodin-Semrl
- Subjects
Pathology ,RB1-214 - Abstract
The effects of anti-inflammatory plant extracts, such as black tea extract (BTE) and resveratrol (RSV) could modulate cell activation leading to atherosclerosis, however there is little comparative information about how different endothelial cell types are affected by these compounds. In order to compare human endothelial cells derived from different origins (umbilical vein or HUVEC, coronary artery or HCAEC, microvascular or HMVEC) and their interleukin-1β (IL-1β) responsiveness, IL-6 ELISA, RT-PCR, tissue factor assay, and prostacyclin responses using 6-keto PGF1α ELISA were determined. The IL-1β-induced IL-6 levels were dose-dependent with highest responses seen in HCAEC. Significant inhibition of IL-1β responses was achieved with BTE and RSV, with the largest decrease of IL-6 and TF seen in HCAEC. Prostacyclin levels were highest in HUVEC and were inhibited by RSV in all cell types. The differences between the endothelial cell types could account for greater susceptibility of coronary arteries to inflammation and atherogenesis.
- Published
- 2009
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29. Correlation of the High-Resolution Computed Tomography Patterns of Intrathoracic Sarcoidosis with Serum Levels of SAA, CA 15.3, SP-D, and Other Biomarkers of Interstitial Lung Disease
- Author
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Terčelj, Zala Leštan Ramovš, Snežna Sodin-Šemrl, Katja Lakota, Saša Čučnik, Damjan Manevski, Rok Zbačnik, Mirjana Zupančič, Martin Verbič, and Marjeta
- Subjects
intrathoracic sarcoidosis ,biomarker ,HRCT ,Scadding stage - Abstract
Studies on the serum biomarkers of granulomatous inflammation and pulmonary interstitial disease in intrathoracic sarcoidosis have shown conflicting results. We postulated that differences in the concentrations of serum biomarkers can be explained by the heterogenous patterns of sarcoidosis seen on thoracic HRCT. Serum biomarker levels in 79 consecutive patients, newly diagnosed with intrathoracic sarcoidosis, were compared to our control group of 56 healthy blood donors. An analysis was performed with respect to HRCT characteristics (the presence of lymph node enlargement, perilymphatic or peribronchovascular infiltrates, ground-glass lesions, or fibrosis), CXR, and disease extent. Serum levels of CXCL9, CXCL10, CTO, and CCL18 were statistically significantly increased in all patients compared to controls. Serum levels of CA15.3 were statistically significantly increased in all patients with parenchymal involvement. SAA was increased in patients with ground-glass lesions while SP-D levels were statistically significantly increased in patients with lung fibrosis. Only SP-D and CA15.3 showed a significant correlation to interstitial disease extent. In conclusion, we found that sarcoidosis patients with different HRCT patterns of intrathoracic sarcoidosis have underlying biochemical differences in their serum biomarkers transcending Scadding stages. The stratification of patients based on both radiologic and biochemical characteristics could enable more homogenous patient selection for further prognostic studies.
- Published
- 2023
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30. Adipose tissue and adipose secretome in systemic sclerosis
- Author
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Katja Lakota, Neža Brezovec, and Blaž Burja
- Subjects
Scleroderma, Systemic ,Stromal cell ,business.industry ,Mesenchymal stem cell ,Adipokine ,Adipose tissue ,Cell Differentiation ,Mesenchymal Stem Cells ,Context (language use) ,Stromal vascular fraction ,chemistry.chemical_compound ,Adipose Tissue ,Rheumatology ,chemistry ,Adipocyte ,Adipocytes ,Cancer research ,Humans ,Lipolysis ,Medicine ,business - Abstract
PURPOSE OF REVIEW Adipose tissue is closely associated with systemic sclerosis (SSc)-pathology, both anatomically and functionally. This review focuses on local effects of adipocytes in the context of adipose to mesenchymal transdifferentiation (AMT), effects of the adipose stromal vascular fraction on SSc pathogenesis and systemic effects of adipose tissue secretome. RECENT FINDINGS Novel populations of fibroblasts evolving from adipose tissue were identified- for example COL11+ cancer-associated fibroblasts differentiated from adipose-derived stromal cells. Lipofibroblasts in human lungs were described using nonconventional markers that allow more effective population identification. These findings could make an important contribution to further clarification of adipocyte involvement in SSc.Recent studies confirmed that lipolysis contributes to fibrogenesis through AMT differentiation and release of fatty acids (FA). Unbalanced metabolism of FA has been reported in several studies in SSc. Other adipose tissue secretome molecules (e.g. lysophosphatidic acid), novel adipokines and extracellular vesicles from adipose mesenchymal stem cells make important contributions to the pro-/antifibrotic balance. SUMMARY There is a growing evidence of important contribution of adipose tissue and its secretome to SSc pathogenesis. Novel techniques such as single-cell RNA sequencing (scRNAseq) and metabolomics, albeit challenging to use in adipose tissue, will provide further evidence.
- Published
- 2021
31. Dysregulated expression of arterial microRNAs and their target gene networks in temporal arteries of treatment-naïve patients with giant cell arteritis
- Author
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Vesna Jurčić, Mojca Frank-Bertoncelj, Žiga Rotar, Katja Lakota, S. Sodin-Šemrl, Oliver Distler, Alojzija Hočevar, Tadeja Kuret, Saša Čučnik, University of Zurich, and Frank-Bertoncelj, Mojca
- Subjects
0301 basic medicine ,Pathology ,MMP2 ,preoblikovanje arterij ,arterial ultrasound ,Biopsy ,1607 Spectroscopy ,microRNA-target genes ,MMP9 ,0302 clinical medicine ,mikroRNA ,Gene Regulatory Networks ,Biology (General) ,skin and connective tissue diseases ,velikanski celični arteritis ,Spectroscopy ,TIMP1 ,Ultrasonography ,microRNA ,10051 Rheumatology Clinic and Institute of Physical Medicine ,toll-like receptor signaling ,General Medicine ,Immunohistochemistry ,vision disturbances ,Computer Science Applications ,Temporal Arteries ,Vascular endothelial growth factor A ,Chemistry ,KLF4 ,cardiovascular system ,RNA Interference ,Disease Susceptibility ,Symptom Assessment ,1606 Physical and Theoretical Chemistry ,medicine.medical_specialty ,1503 Catalysis ,QH301-705.5 ,610 Medicine & health ,Biology ,Catalysis ,Article ,Inorganic Chemistry ,arterial remodelling ,03 medical and health sciences ,Kruppel-Like Factor 4 ,medicine ,1312 Molecular Biology ,1706 Computer Science Applications ,Humans ,Arteritis ,RNA, Messenger ,cardiovascular diseases ,Physical and Theoretical Chemistry ,Molecular Biology ,QD1-999 ,030203 arthritis & rheumatology ,1604 Inorganic Chemistry ,giant cell arteritis ,Gene Expression Profiling ,Organic Chemistry ,medicine.disease ,udc:616-002 ,Giant cell arteritis ,MicroRNAs ,030104 developmental biology ,Gene Expression Regulation ,Biomarkers ,1605 Organic Chemistry - Abstract
In this study, we explored expression of microRNA (miR), miR-target genes and matrix remodelling molecules in temporal artery biopsies (TABs) from treatment-naïve patients with giant cell arteritis (GCA, n = 41) and integrated these analyses with clinical, laboratory, ultrasound and histological manifestations of GCA. NonGCA patients (n = 4) served as controls. GCA TABs exhibited deregulated expression of several miRs (miR-21-5p, -145-5p, -146a-5p, -146b-5p, -155-5p, 424-3p, -424-5p, -503-5p), putative miR-target genes (YAP1, PELI1, FGF2, VEGFA, KLF4) and matrix remodelling factors (MMP2, MMP9, TIMP1, TIPM2) with key roles in Toll-like receptor signaling, mechanotransduction and extracellular matrix biology. MiR-424-3p, -503-5p, KLF4, PELI1 and YAP1 were identified as new deregulated molecular factors in GCA TABs. Quantities of miR-146a-5p, YAP1, PELI1, FGF2, TIMP2 and MMP9 were particularly high in histologically positive GCA TABs with occluded temporal artery lumen. MiR-424-5p expression in TABs and the presence of facial or carotid arteritis on ultrasound were associated with vision disturbances in GCA patients. Correlative analysis of miR-mRNA quantities demonstrated a highly interrelated expression network of deregulated miRs and mRNAs in temporal arteries and identified KLF4 as a candidate target gene of deregulated miR-21-5p, -146a-5p and -155-5p network in GCA TABs. Meanwhile, arterial miR and mRNA expression did not correlate with constitutive symptoms and signs of GCA, elevated markers of systemic inflammation nor sonographic characteristics of GCA. Our study provides new insights into GCA pathophysiology and uncovers new candidate biomarkers of vision impairment in GCA.
- Published
- 2022
32. Synergy between 15-lipoxygenase and secreted PLA 2 promotes inflammation by formation of TLR4 agonists from extracellular vesicles
- Author
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Nejc Ilc, Van Thai Ha, Roman Jerala, Duško Lainšček, Mateja Manček-Keber, Tuulia Hyötyläinen, Eva Jarc-Jovičić, Valery N. Bochkov, Fons A. J. van de Loo, Bernd Gesslbauer, Toni Petan, Matija Tomšič, and Katja Lakota
- Subjects
0301 basic medicine ,Gout ,Lipopolysaccharide ,Arthritis ,Inflammation ,Arthritis, Rheumatoid ,Extracellular Vesicles ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,All institutes and research themes of the Radboud University Medical Center ,0302 clinical medicine ,Phospholipase A2 ,Immune system ,Synovial Fluid ,medicine ,Extracellular ,Animals ,Arachidonate 15-Lipoxygenase ,Humans ,Mice, Knockout ,Multidisciplinary ,Innate immune system ,biology ,Biological Sciences ,medicine.disease ,Cell biology ,Mice, Inbred C57BL ,Toll-Like Receptor 4 ,Oxidative Stress ,Phospholipases A2 ,HEK293 Cells ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,biology.protein ,TLR4 ,Female ,lipids (amino acids, peptides, and proteins) ,Lysophospholipids ,medicine.symptom ,Oxidation-Reduction ,Inflammatory diseases Radboud Institute for Molecular Life Sciences [Radboudumc 5] - Abstract
Damage-associated endogenous molecules induce innate immune response, thus making sterile inflammation medically relevant. Stress-derived extracellular vesicles (stressEVs) released during oxidative stress conditions were previously found to activate Toll-like receptor 4 (TLR4), resulting in expression of a different pattern of immune response proteins in comparison to lipopolysaccharide (LPS), underlying the differences between pathogen-induced and sterile inflammation. Here we report that synergistic activities of 15-lipoxygenase (15-LO) and secreted phospholipase A(2) (sPLA(2)) are needed for the formation of TLR4 agonists, which were identified as lysophospholipids (lysoPLs) with oxidized unsaturated acyl chain. Hydroxy, hydroperoxy, and keto products of 2-arachidonoyl-lysoPI oxidation by 15-LO were identified by mass spectrometry (MS), and they activated the same gene pattern as stressEVs. Extracellular PLA(2) activity was detected in the synovial fluid from rheumatoid arthritis and gout patients. Furthermore, injection of sPLA(2) promoted K/BxN serum-induced arthritis in mice, whereby ankle swelling was partially TLR4 dependent. Results confirm the role of oxidized lysoPL of stressEVs in sterile inflammation that promotes chronic diseases. Both 15-LO and sPLA(2) enzymes are induced during inflammation, which opens the opportunity for therapy without compromising innate immunity against pathogens.
- Published
- 2020
33. Titanium Dioxide Nanotube Arrays for Cardiovascular Stent Applications
- Author
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Katja Lakota, Mukta Kulkarni, Miran Mozetič, Katjuša Mrak-Poljšak, Janez Kovač, Aleš Iglič, Metka Benčina, S. Sodin-Šemrl, and Ita Junkar
- Subjects
Neointimal hyperplasia ,Materials science ,General Chemical Engineering ,medicine.medical_treatment ,chemistry.chemical_element ,Stent ,General Chemistry ,medicine.disease ,Article ,Titanium oxide ,Contact angle ,chemistry.chemical_compound ,Chemistry ,chemistry ,Restenosis ,Titanium dioxide ,medicine ,Cell adhesion ,QD1-999 ,Titanium ,Biomedical engineering - Abstract
Efficient stent implantation among others depends on avoiding the aggregation of platelets in the blood vessels and appropriate proliferation of endothelial cells and controlled proliferation of smooth muscle cells, which reduces the development of pathology, such as neointimal hyperplasia, thrombosis, and restenosis. The current article provides an elegant solution for prevention of platelet and smooth muscle cell adhesion and activation on stent surfaces while obtaining surface conditions to support the growth of human coronary artery endothelial cells. This was achieved by surface nanostructuring and chemical activation of the surface. Specific nanotopographies of titanium were obtained by electrochemical anodization, while appropriate chemical properties were attained by treatment of titanium oxide nanotubes by highly reactive oxygen plasma. Surface properties were studied by scanning electron microscopy, atomic force microscopy, and X-ray photoelectron spectroscopy. Wettability was evaluated by measuring the water contact angle. The influence of nanostructured morphology and plasma modification on in vitro biological response with human coronary artery endothelia and smooth muscle cells as well as whole blood was studied. Our results show that a combination of nanostructuring and plasma modification of the surfaces is an effective way to achieve desired biological responses necessary for implantable materials such as stents.
- Published
- 2020
34. DES-Amyloidoses 'Amyloidoses through thelooking-glass': A knowledgebase developedfor exploring and linking information relatedto human amyloid-related diseases
- Author
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Vladan P. Bajic, Adil Salhi, Katja Lakota, Aleksandar Radovanovic, Rozaimi Razali, Lada Zivkovic, Biljana Spremo-Potparevic, Mahmut Uludag, Faroug Tifratene, Olaa Motwalli, Benoit Marchand, Vladimir B. Bajic, Takashi Gojobori, Esma R. Isenovic, and Magbubah Essack
- Subjects
Amyloid ,Serum Amyloid A Protein ,Multidisciplinary ,Alzheimer Disease ,Knowledge Bases ,Humans ,Amyloidosis - Abstract
More than 30 types of amyloids are linked to close to 50 diseases in humans, the most prominent being Alzheimer’s disease (AD). AD is brain-related local amyloidosis, while another amyloidosis, such as AA amyloidosis, tends to be more systemic. Therefore, we need to know more about the biological entities’ influencing these amyloidosis processes. However, there is currently no support system developed specifically to handle this extraordinarily complex and demanding task. To acquire a systematic view of amyloidosis and how this may be relevant to the brain and other organs, we needed a means to explore "amyloid network systems" that may underly processes that leads to an amyloid-related disease. In this regard, we developed the DES-Amyloidoses knowledgebase (KB) to obtain fast and relevant information regarding the biological network related to amyloid proteins/peptides and amyloid-related diseases. This KB contains information obtained through text and data mining of available scientific literature and other public repositories. The information compiled into the DES-Amyloidoses system based on 19 topic-specific dictionaries resulted in 796,409 associations between terms from these dictionaries. Users can explore this information through various options, including enriched concepts, enriched pairs, and semantic similarity. We show the usefulness of the KB using an example focused on inflammasome-amyloid associations. To our knowledge, this is the only KB dedicated to human amyloid-related diseases derived primarily through literature text mining and complemented by data mining that provides a novel way of exploring information relevant to amyloidoses.
- Published
- 2022
35. Neutralizing effects of anti-infliximab antibodies on synergistically-stimulated human coronary artery endothelial cells
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Saša Čučnik, M. Ogrič, Snezna Sodin Semrl, Katjuša Mrak Poljšak, Sonja Praprotnik, Polona Žigon, and Katja Lakota
- Subjects
0301 basic medicine ,Interleukin-1beta ,Stimulation ,030204 cardiovascular system & hematology ,Pharmacology ,03 medical and health sciences ,0302 clinical medicine ,Affinity chromatography ,medicine ,Humans ,Serum amyloid A ,Cells, Cultured ,Serum Amyloid A Protein ,biology ,Tumor Necrosis Factor-alpha ,business.industry ,Endothelial Cells ,Antibodies, Neutralizing ,Coronary Vessels ,Infliximab ,stomatognathic diseases ,030104 developmental biology ,medicine.anatomical_structure ,Polyclonal antibodies ,biology.protein ,Tumor Necrosis Factor Inhibitors ,Tumor necrosis factor alpha ,Inflammation Mediators ,Antibody ,Cardiology and Cardiovascular Medicine ,business ,medicine.drug ,Artery - Abstract
Background and aims Patients with rheumatic diseases have an increased risk of atherosclerosis with up-regulated serum amyloid A (SAA), tumor necrosis factor-α (TNF-α) and interleukin-1β (IL-1β), which were reported to activate human coronary artery endothelial cells (HCAEC). We aimed to investigate the effects of TNF-α inhibitor infliximab and anti-infliximab antibodies on the TNF-α/IL-1β/SAA activated HCAEC. Methods HCAEC were incubated with TNF-α, IL-1β, SAA, infliximab, anti-infliximab antibodies and their combinations. The protein levels of pro- and anti-atherogenic analytes were measured in supernatants using ELISA and multiplex assays, while mRNA expression was determined by RT-PCR. Anti-infliximab antibodies were purified from sera samples by affinity chromatography. Results IL-6, IL-8, GM-CSF and GRO-α were synergistically up-regulated in triple stimulation with TNF-α, IL-1β and SAA, while their levels in solely SAA- or TNF-α-stimulated HCAEC did not increase. IL-1Ra, IL-1α, VCAM-1, MCP-1, IL-10 and IL-17A were increased, but no synergistic responses were observed in triple stimulation. Infliximab was effective in lowering the synergistic effect of IL-6, IL-8, GM-CSF and GRO-α in triple stimulation, while anti-infliximab antibodies restored the levels. The changes were confirmed at the mRNA expression level for IL-6, IL-8 and GM-CSF. Conclusions Triple stimulation with TNF-α, IL-1β and SAA synergistically elevated IL-6, IL-8, GM-CSF and GRO-α release in supernatants of HCAEC, with infliximab substantially inhibiting their levels. An isolated, enriched fraction of polyclonal anti-infliximab antibodies was capable of neutralizing infliximab, in the presence of TNF-α/IL-1β/SAA. The long-term presence of anti-infliximab antibodies in the circulation of patients with chronic rheumatic diseases is potentially important for promoting the atherosclerotic process.
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- 2019
36. Vasculature-based biomarkers and segmentation from hyperspectral images of murine peritonitis model
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Jost Stergar, Katja Lakota, Martina Perseˇ, Matija Tomsic, and Matija Milanic
- Published
- 2021
37. Systemic Sclerosis
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Katja Lakota, Katja Perdan Pirkmajor, and John Varga
- Published
- 2021
38. Hyperspectral evaluation of peritoneal fibrosis in mouse models
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Nika Kojc, Matija Milanič, Martina Perše, Jošt Stergar, Rok Dolenec, Matija Tomšič, and Katja Lakota
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Pathology ,medicine.medical_specialty ,Sample processing ,medical imaging ,udc:616-073 ,01 natural sciences ,medical physics ,Article ,010309 optics ,03 medical and health sciences ,Animal model ,Light propagation ,Fibrosis ,0103 physical sciences ,Medicine ,Peritoneal Fibrosis ,030304 developmental biology ,0303 health sciences ,business.industry ,Peritoneal membrane ,Hyperspectral imaging ,medicinska fizika ,medicine.disease ,Atomic and Molecular Physics, and Optics ,medicinsko slikanje ,Animal studies ,business ,Biotechnology - Abstract
Analysis of morphological changes of the peritoneal membrane is an essential part of animal studies when investigating molecular mechanisms involved in the development of peritoneal fibrosis or testing the effects of potential therapeutic agents. Current methods, such as histology and immunohistochemistry, require time consuming sample processing and analysis and result in limited spatial information. In this paper we present a new method to evaluate structural and chemical changes in an animal model of peritoneal fibrosis that is based on hyperspectral imaging and a model of light transport. The method is able to distinguish between healthy and diseased subjects based on morphological as well as physiological parameters such as blood and scattering parameters. Furthermore, it enables evaluation of changes, such as degree of inflammation and fibrosis, that are closely related to histological findings.
- Published
- 2021
39. Interleukin-1β Induces Intracellular Serum Amyloid A1 Expression in Human Coronary Artery Endothelial Cells and Promotes its Intercellular Exchange
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Tadeja Kuret, Katja Lakota, Katjuša Mrak-Poljšak, Andreja Erman, S. Sodin-Semrl, and Saša Čučnik
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Serum Amyloid A Protein ,Endothelium ,medicine.diagnostic_test ,Chemistry ,Intercellular transport ,Interleukin-1beta ,Immunology ,Serum amyloid A1 ,Endothelial Cells ,Biological Transport ,Coronary Artery Disease ,Coronary Vessels ,Molecular biology ,Flow cytometry ,Blot ,medicine.anatomical_structure ,Downregulation and upregulation ,medicine ,Humans ,Immunology and Allergy ,Serum amyloid A ,Cells, Cultured ,Intracellular - Abstract
Serum amyloid A (SAA) is an acute-phase protein with important, pathogenic role in the development of atherosclerosis. Since dysfunctional endothelium represents a key early step in atherogenesis, we aimed to determine whether induced human coronary artery endothelial cells (HCAEC) modulate SAA1/2/4 expression and influence intracellular location and intercellular transport of SAA1. HCAEC were stimulated with 1 ng/ml IL-1β, 10 ng/ml IL-6, and/or 1 μM dexamethasone for 24 h. QPCR, Western blots, ELISA, and immunofluorescent labeling were performed for detection of SAA1/2/4 mRNA and protein levels, respectively. In SAA1 transport experiments, FITC- or Cy3-labeled SAA1 were added to HCAEC separately, for 24 h, followed by a combined incubation of SAA1-FITC and SAA1-Cy3 positive cells, with IL-1β and analysis by flow cytometry. IL-1β upregulated SAA1 (119.9-fold, p
- Published
- 2019
40. Adiponectin Deregulation in Systemic Autoimmune Rheumatic Diseases
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John Varga, Katja Lakota, Neža Brezovec, Katja Perdan-Pirkmajer, S. Sodin-Semrl, and Saša Čučnik
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0301 basic medicine ,Lupus nephritis ,Review ,lcsh:Chemistry ,chemistry.chemical_compound ,0302 clinical medicine ,skin and connective tissue diseases ,lcsh:QH301-705.5 ,Spectroscopy ,biology ,General Medicine ,Computer Science Applications ,Rheumatoid arthritis ,Cytokines ,medicine.symptom ,hormones, hormone substitutes, and hormone antagonists ,PPAR-γ ,systemic autoimmune rheumatic diseases ,interleukin 6 ,Inflammation ,Context (language use) ,tumor necrosis factor α ,Models, Biological ,Catalysis ,Autoimmune Diseases ,Proinflammatory cytokine ,Inorganic Chemistry ,03 medical and health sciences ,Tocilizumab ,Rheumatic Diseases ,medicine ,Animals ,Humans ,Physical and Theoretical Chemistry ,Interleukin 6 ,Molecular Biology ,030203 arthritis & rheumatology ,therapy ,Adiponectin ,adiponectin ,business.industry ,Organic Chemistry ,medicine.disease ,030104 developmental biology ,chemistry ,lcsh:Biology (General) ,lcsh:QD1-999 ,Immunology ,biology.protein ,business ,gene regulation ,Transcription Factors - Abstract
Deregulation of adiponectin is found in systemic autoimmune rheumatic diseases (SARDs). Its expression is downregulated by various inflammatory mediators, but paradoxically, elevated serum levels are present in SARDs with high inflammatory components, such as rheumatoid arthritis and systemic lupus erythematosus. Circulating adiponectin is positively associated with radiographic progression in rheumatoid arthritis as well as with cardiovascular risks and lupus nephritis in systemic lupus erythematosus. However, in SARDs with less prominent inflammation, such as systemic sclerosis, adiponectin levels are low and correlate negatively with disease activity. Regulators of adiponectin gene expression (PPAR-γ, Id3, ATF3, and SIRT1) and inflammatory cytokines (interleukin 6 and tumor necrosis factor α) are differentially expressed in SARDs and could therefore influence total adiponectin levels. In addition, anti-inflammatory therapy could also have an impact, as tocilizumab treatment is associated with increased serum adiponectin. However, anti-tumor necrosis factor α treatment does not seem to affect its levels. Our review provides an overview of studies on adiponectin levels in the bloodstream and other biological samples from SARD patients and presents some possible explanations why adiponectin is deregulated in the context of therapy and gene regulation.
- Published
- 2021
41. Hyperspectral evaluation of vasculature in induced peritonitis mouse models
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Jošt Stergar, Katja Lakota, Martina Perše, Matija Tomšič, and Matija Milanič
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Article ,Atomic and Molecular Physics, and Optics ,Biotechnology - Abstract
Imaging of blood vessel structure in combination with functional information about blood oxygenation can be important in characterizing many different health conditions in which the growth of new vessels contributes to the overall condition. In this paper, we present a method for extracting comprehensive maps of the vasculature from hyperspectral images that include tissue and vascular oxygenation. We also show results from a preclinical study of peritonitis in mice. First, we analyze hyperspectral images using Beer-Lambert exponential attenuation law to obtain maps of hemoglobin species throughout the sample. We then use an automatic segmentation algorithm to extract blood vessels from the hemoglobin map and combine them into a vascular structure-oxygenation map. We apply this methodology to a series of hyperspectral images of the abdominal wall of mice with and without induced peritonitis. Peritonitis is an inflammation of peritoneum that leads, if untreated, to complications such as peritoneal sclerosis and even death. Characteristic inflammatory response can also be accompanied by changes in vasculature, such as neoangiogenesis. We demonstrate a potential application of the proposed segmentation and processing method by introducing an abnormal tissue fraction metric that quantifies the amount of tissue that deviates from the average values of healthy controls. It is shown that the proposed metric successfully discriminates between healthy control subjects and model subjects with induced peritonitis and has a high statistical significance.
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- 2022
42. Strukture bioloških molekul
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Katja Lakota, Alja Prah, and Andrej Perdih
- Abstract
Ucbenik prinasa poglavja za studente in studentke Bioinformatike in Varstvene biologije pri predmetu Strukture bioloskih molekul na UP Famnit Univerze na Primorskem
- Published
- 2020
43. Human mesenchymal stromal cells from different tissues exhibit unique responses to different inflammatory stimuli
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Matija Tomšič, Snezna Sodin-Semrl, Andreja Erman, Ariana Barlič, Katja Lakota, Katjuša Mrak-Poljšak, and Blaž Burja
- Subjects
0301 basic medicine ,Stromal cell ,Adipose tissue ,Gene Expression ,Inflammation ,Bone Marrow Cells ,Biology ,General Biochemistry, Genetics and Molecular Biology ,CCL5 ,Proinflammatory cytokine ,Umbilical Cord ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Cells, Cultured ,Mesenchymal stem cell ,Mesenchymal Stem Cells ,General Medicine ,Molecular biology ,030104 developmental biology ,medicine.anatomical_structure ,Adipose Tissue ,030220 oncology & carcinogenesis ,Tumor necrosis factor alpha ,Bone marrow ,medicine.symptom - Abstract
Background Mesenchymal stromal cell (MSC) - based therapies are emerging as promising treatment of various autoimmune diseases, however the utility of different MSC tissue sources remains elusive. We aimed to characterize MSC from different origins, namely bone marrow (BM), adipose tissue (AT) and umbilical cord (UC) and determine their functional effects on normal human lung fibroblasts (NHLF). Methods BM-, AT- or UC-MSC were isolated each from 3 different healthy donors. The gene expression and protein secretion were analyzed at basal level, along with TNFα-, IL-1β- and SAA- stimulated cells using real-time PCR and Luminex technology. Effect of conditioned medium (CM) from different MSC sources on migration was determined with wound scratch assay, while mitotic and apoptotic rates were studied using immunofluorescence microscopy. Results BM-MSC expressed highest basal mRNA levels of SDF1 and VCAM-1, while other genes were similarly expressed between MSC origins. TNFα priming of AT-MSC gained a prominent increase in IDO1 and CCL5 gene expression, with 928-fold and 4396-fold changes, respectively. Among all tissue sources, basal UC-MSC released highest protein levels of most measured analytes, including IL-6, IL-8, MCP-1, ICAM1, HGF, MMP1 and CH3L1. BM- and AT-MSC derived CM enhanced wound closure in NHLF, while an opposite effect was observed with UC-MSC derived CM. Our data also suggests that MSC-CM could contribute to decreased mitotic potential and increased apoptotic rate in lung fibroblasts. Conclusions Our study highlights origin-specific MSC profile differences and emphasizes a heterogenic response of different MSC to inflammatory stimuli.
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- 2020
44. Clinically important neutralizing anti-drug antibodies detected with an in-house competitive ELISA
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M. Ogrič, Snezna Sodin-Semrl, David Drobne, Saša Čučnik, Borut Štabuc, Polona Žigon, Sonja Praprotnik, and Katja Lakota
- Subjects
Adult ,Male ,Drug ,medicine.medical_specialty ,media_common.quotation_subject ,Enzyme-Linked Immunosorbent Assay ,Kaplan-Meier Estimate ,030226 pharmacology & pharmacy ,Treatment failure ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,Genes, Reporter ,Predictive Value of Tests ,Internal medicine ,medicine ,Adalimumab ,Humans ,Treatment Failure ,Aged ,media_common ,Aged, 80 and over ,biology ,medicine.diagnostic_test ,Tumor Necrosis Factor-alpha ,business.industry ,General Medicine ,Middle Aged ,Inflammatory Bowel Diseases ,Antibodies, Neutralizing ,Infliximab ,Log-rank test ,Therapeutic drug monitoring ,Immunology ,biology.protein ,Female ,030211 gastroenterology & hepatology ,Drug Monitoring ,Antibody ,business ,medicine.drug - Abstract
Therapeutic drug monitoring of TNF-alpha inhibitors is crucial for evaluating patients with inflammatory diseases on a personalized level. It has been clinically observed that many patients receiving TNF-alpha inhibitors, with negative drug and anti-drug antibody results from bridging ELISA (bELISA), lose their drug response over time, despite dose optimization. Our aims were to develop innovative in-house competitive ELISAs (cELISAs) for the detection of neutralizing antibodies against infliximab and adalimumab and compare their results to reporter gene assay (RGA) and in-house bELISA. Furthermore, we aimed to evaluate patient anti-drug antibody results in regard to their clinical records and potential benefits of therapeutic drug monitoring with the novel cELISAs. Sera of patients treated with infliximab (n = 46) or adalimumab (n = 31), having undetectable drug levels, were tested with our in-house cELISA. Briefly, samples were incubated with a fixed amount of drug and the neutralizing capacity of the samples was determined. The cELISA results were compared to RGA and bELISA results using Spearman’s correlation coefficient. Additionally, patient clinical data were evaluated in line with the results of cELISA, bELISA, and RGA using the Kaplan-Meier analysis and the Log Rank test. Both anti-infliximab and anti-adalimumab cELISAs showed very good correlation to RGA (r = 0.932, p
- Published
- 2018
45. Analysis of Drug Effects on Primary Human Coronary Artery Endothelial Cells Activated by Serum Amyloid A
- Author
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Saša Čučnik, M. Ogrič, Katjuša Mrak-Poljšak, D. Hrušovar, Katja Lakota, Polona Žigon, S. Sodin-Semrl, Borut Božič, and Matija Tomšič
- Subjects
Article Subject ,Immunology ,Population ,Vascular Cell Adhesion Molecule-1 ,Enzyme-Linked Immunosorbent Assay ,030204 cardiovascular system & hematology ,Pharmacology ,03 medical and health sciences ,0302 clinical medicine ,Diclofenac ,Plasminogen Activator Inhibitor 1 ,lcsh:Pathology ,medicine ,Humans ,Serum amyloid A ,Certolizumab pegol ,education ,030203 arthritis & rheumatology ,Serum Amyloid A Protein ,education.field_of_study ,Interleukin-6 ,business.industry ,Interleukin-8 ,Endothelial Cells ,Cell Biology ,Coronary Vessels ,stomatognathic diseases ,Meloxicam ,business ,Rosiglitazone ,Etoricoxib ,Research Article ,lcsh:RB1-214 ,Fluvastatin ,medicine.drug - Abstract
Background. RA patients have a higher incidence of cardiovascular diseases compared to the general population. Serum amyloid A (SAA) is an acute-phase protein, upregulated in sera of RA patients. Aim. To determine the effects of medications on SAA-stimulated human coronary artery endothelial cells (HCAEC). Methods. HCAEC were preincubated for 2 h with medications from sterile ampules (dexamethasone, methotrexate, certolizumab pegol, and etanercept), dissolved in medium (captopril) or DMSO (etoricoxib, rosiglitazone, meloxicam, fluvastatin, and diclofenac). Human recombinant apo-SAA was used to stimulate HCAEC at a final 1000 nM concentration for 24 hours. IL-6, IL-8, sVCAM-1, and PAI-1 were measured by ELISA. The number of viable cells was determined colorimetrically. Results. SAA-stimulated levels of released IL-6, IL-8, and sVCAM-1 from HCAEC were significantly attenuated by methotrexate, fluvastatin, and etoricoxib. Both certolizumab pegol and etanercept significantly decreased PAI-1 by an average of 43%. Rosiglitazone significantly inhibited sVCAM-1 by 58%. Conclusion. We observed marked influence of fluvastatin on lowering cytokine production in SAA-activated HCAEC. Methotrexate showed strong beneficial effects for lowering released Il-6, IL-8, and sVCAM-1. Interesting duality was observed for NSAIDs, with meloxicam exhibiting opposite-trend effects from diclofenac and etoricoxib. This represents unique insight into specific responsiveness of inflammatory-driven HCAEC relevant to atherosclerosis.
- Published
- 2018
46. Short lymphocyte, but not granulocyte, telomere length in a subset of patients with systemic sclerosis
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Mary Armanios, Mary Carns, Katja Lakota, Vidya Sagar Hanumanthu, John Varga, and Rishi Agrawal
- Subjects
030203 arthritis & rheumatology ,0301 basic medicine ,Telomerase ,business.industry ,Immunology ,Interstitial lung disease ,Autoantibody ,respiratory system ,medicine.disease ,General Biochemistry, Genetics and Molecular Biology ,Scleroderma ,respiratory tract diseases ,Telomere ,03 medical and health sciences ,Idiopathic pulmonary fibrosis ,030104 developmental biology ,0302 clinical medicine ,Rheumatology ,Pulmonary fibrosis ,Immunology and Allergy ,Medicine ,Risk factor ,business - Abstract
Interstitial lung disease (ILD) affects up to 40% of patients with systemic sclerosis (SSc) and is the leading cause of death.1 The risk of ILD is increased in SSc patients who are older and antitopoisomerase-1 antibody (ATA) positive.2 SSc-ILD shares features with idiopathic pulmonary fibrosis (IPF), although these two fibrosing lung diseases have different natural histories. Telomere shortening is the best-defined risk factor for IPF. In familial IPF, mutations in seven telomerase and telomere-related genes explain familial clustering in 30% of cases.3 Sporadic forms of IPF are also associated with telomere shortening in 50%–60% of cases.4 5 In IPF, short telomeres are found across cell types, which is consistent with an inherited and systemic defect in telomere maintenance.4 Previous studies of telomere length (TL) in patients with SSc have yielded conflicting results, with some studies showing longer and others shorter TL compared with age-matched controls.6 7 A major caveat in these studies is that TL was measured using techniques that are both highly variable and fail to distinguish TL among leucocyte subsets. Moreover, these studies failed to examine the impact of ILD on TL.We therefore sought to determine TL in patients with SSc and associated ILD using a clinically validated robust assay that allows accurate measurement of TL in lymphocytes and granulocytes by flow cytometry and fluorescence in situ hybridisation (flowFISH).8 9 Subjects were evaluated at the Northwestern Scleroderma Program between 2013 and 2014 and …
- Published
- 2019
47. THU0306 NEUTROPHIL ADHESION MOLECULES AND INFLAMMATORY CYTOKINES AS BIOMARKERS FOR MONITORING DISEASE PROGRESSION IN GIANT CELL ARTERITIS
- Author
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Gerhard G. Thallinger, Matija Tomšič, Tadeja Kuret, Katja Lakota, P Zigon, Saša Čučnik, S. Sodin-Semrl, and Alojzija Hočevar
- Subjects
medicine.medical_specialty ,business.industry ,Inflammation ,medicine.disease ,Gastroenterology ,CHI3L1 ,Proinflammatory cytokine ,Giant cell arteritis ,Internal medicine ,medicine ,Biomarker (medicine) ,Serum amyloid A ,medicine.symptom ,business ,Whole blood ,Leflunomide ,medicine.drug - Abstract
Background: Monitoring giant cell arteritis (GCA) activity with appropriate biomarkers is important, as current evaluation, based mainly on clinical symptoms/signs and traditional markers of inflammation, is not always sufficient and reliable. Objectives: Our goal was to identify cellular and molecular biomarkers that could help clinicians to closely monitor GCA progression and/or treatment response. Methods: Peripheral blood was obtained from 27 GCA patients at time of diagnosis (before glucocorticoid (GC) treatment), and subsequently at weeks 1, 4, 12, 24 and 48 of follow-up (FU). At diagnosis, all patients received GC in line with EULAR recommendations with a slow GC tapering starting after week 4. At week 12, some of the patients (16/27) received additionally leflunomide (10 mg). Whole blood samples were stained, lysed, fixed and analyzed by flow cytometry. The expression of adhesion molecules (CD62L, CD11b) was determined on neutrophils. Sera levels of serum amyloid A (SAA) and IL-6 were measured by nephelometry and ELISA, respectively. Levels of IL-8, IL-18, IL–23, L-selectin and CHI3L1 were determined by MagPix using human pre-mixed multi-analyte kits. Results: At weeks 1 and 4 of FU we detected a decrease in neutrophil expression of CD62L and CD11b, as well as in sera levels of SAA, IL-6, IL-8, IL-18, L-selectin and CHI3L1 in all GCA patients. At week 12 (8 weeks after GC tapering) an elevation of CD11b, SAA, IL-6 and IL-23 as compared to week 4 was observed (Figures 1 and 2). At weeks 24 and 48 of FU we identified four different groups of biomarkers. The first group consisted of neutrophil CD62L (p Conclusion: Neutrophil surface markers CD62L and CD11b together with inflammatory parameters (SAA, IL-6, IL-8 and IL-23) could represent informative biomarkers for monitoring disease progression in GCA patients. Important biomarker differences were observed between GC-treated GCA patients, in the presence and absence of leflunomide, serving as a good basis for predicting relapses. Acknowledgement: The authors would like to acknowledge funding from the Slovenian Research Agency (ARRS) for the National Research Program P3-0314. Disclosure of Interests: None declared
- Published
- 2019
48. THU0041 MESENCHYMAL STEM CELLS OF DIFFERENT ORIGINS EXHIBIT UNIQUE RESPONSES TO DIFFERENT INFLAMMATORY STIMULI
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Matija Tomšič, Ariana Barlič, S. Sodin-Semrl, Katjuša Mrak-Poljšak, Andreja Erman, Blaž Burja, and Katja Lakota
- Subjects
Stromal cell ,medicine.anatomical_structure ,business.industry ,Mesenchymal stem cell ,medicine ,Cancer research ,Adipose tissue ,Tumor necrosis factor alpha ,Bone marrow ,Interleukin 8 ,Serum amyloid A ,Stem cell ,business - Abstract
Background: Mesenchymal stromal/stem cell (MSC) - based therapies represent promising avenues for treatment of various inflammatory and autoimmune diseases. Currently, a variety of fetal and adult tissues represent a good source of MSC, however further characterization of their effects, especially in an inflammatory environment, is needed. Objectives: Firstly, to characterize MSC from different origins, namely bone marrow (BM), adipose tissue (AT) and umbilical cord (UC), after stimulation with TNFα, IL-1β and serum amyloid A (SAA). Secondly, to determine the effects of MSC secretome on migration, proliferation and apoptosis of lung fibroblasts. Methods: BM-, AT- or UC-MSC were isolated each from 3 healthy donors. The expression and secretion of analytes were studied in each cell type at basal level and followingTNFα- (1 ng/ml), IL-1β- (1 ng/ml) and SAA- (12 µg/ml) stimulation using qPCR (SDF, CCL5, VCAM, PDE, PGC, IDO, VEGF, IGF) and Luminex technology (IL-6, IL8, MCP-1, ICAM, CH3L1, MMP1, MMP3, tenascin, uPA, HGF, VEGF), respectively. Normal healthy lung fibroblasts (NHLF) were used in the wound scratch assay and treated for 24h with 20% of MSC-conditioned media. For evaluation of BM-, AT- and UC conditioned media effects on proliferative and apoptotic activity, Ki-67-immunolabeled mitotic cells and caspase-3-immunolabeled cells were counted using fluorescence microscopy. Results: Treatment of MSC with pro-inflammatory cytokines increased mRNA levels of SDF, CCL5, VCAM1, PGC and IDO, while levels of PDE-5A were down-regulated. The greatest increase in expression was observed in TNFα-stimulated MSCs, namely of two immunomodulatory molecules, CCL5 and IDO in AT-MSC (4396- and 928-fold change increase respectively). Secretome analysis showed highest secretion levels of IL-6, IL-8 and MCP1 after IL-1β-activation in all 3 tissue sources. AT- and BM-derived conditioned media increased NHLF scratch closure, while UC-MSC decreased it. In non-inflammatory conditions, UC-, BM- and AT- MSCs conditioned media decreased the number of mitotic events in NHLF by an average of 40%. Importantly, only the conditioned medium derived from inflammatory cytokine-treated AT- and BM-MSC significantly decreased the mitotic rate of NHLF (p Conclusion: Our results highlight specific roles of MSC from different tissue origins, as well as their response to environmental inflammatory stimuli and suggest that source selection might be critical for the success of treatment approaches in different diagnoses. Disclosure of Interests: None declared
- Published
- 2019
49. SAT0234 RNA SEQUENCING IDENTIFIES AN IGA VASCULITIS ASSOCIATED SERUM MICRORNA SIGNATURE, DISCRIMINATING PATIENTS WITH IGA VASCULITIS FROM AGE- AND SEX-MATCHED HEALTHY SUBJECTS
- Author
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Saša Čučnik, Thomas Grentzinger, Olivier Voinnet, Tadeja Kuret, Neža Brezovec, Matija Tomšič, Oliver Distler, Alojzija Hočevar, Mojca Frank-Bertoncelj, Alexis Sarazin, S. Sodin-Semrl, and Katja Lakota
- Subjects
Immunoglobulin A ,biology ,business.industry ,Arthritis ,medicine.disease ,Scleroderma ,Fold change ,Pathogenesis ,IgA vasculitis ,microRNA ,Immunology ,medicine ,biology.protein ,business ,Vasculitis - Abstract
Background: Immunoglobulin A vasculitis (IgAV) is a small vessel vasculitis with IgA deposits in the vessel wall, manifesting with skin purpura, arthralgia/arthritis, gastrointestinal (GI) and renal complications. Altered serum miRNA signatures can reflect disease-specific pathology, which makes serum miRNAs promising disease biomarkers. We have recently reported that miRNA expression is changed in the affected skin of IgAV patients. The profile of serum miRNAs in IgAV, however, remains unknown. Objectives: To determine the serum miRNA signatures in adult patients with IgAV as compared with healthy controls (HC) and explore in silico their gene targets and pathways. Methods: Small RNA were isolated from sera of IgAV patients with high disease activity (sera collected at the time of diagnosis) and from the age- and sex-matched HC (n=6 each). Small RNA libraries were sequenced with Illumina technology and reads were mapped onto human genome (GRCh38). One IgAV sample was omitted from analysis due to too low number of recovered miRNA reads. Unsupervised clustering was based on the expression of 150 miRNAs with the highest variance across samples. The miRror platform was used to predict gene targets of differentially expressed (DE) miRNAs with log2 fold change ≥ │1│and padj Results: Unsupervised clustering of serum miRNA reads clearly distinguished between IgAV patients and HC (Figure 1). Among 1918 annotated miRNA (miRBase), 446 miRNAs were detected in serum samples and 88 miRNAs were identified as DE between IgAV patients and HC (log2 fold change ≥ │1│, padj Conclusion: Here we report for the first time an IgAV-associated serum miRNA signature. The altered miRNAs clearly discriminate IgAV patients from HC, and might play a key role in the pathogenesis of IgAV. Our study sets the basis for the identification of novel, serum-based disease biomarkers in vasculitis. Disclosure of Interests: ALOJZIJA HOCEVAR: None declared, Katja Lakota: None declared, Thomas Grentzinger: None declared, Alexis Sarazin: None declared, Neža Brezovec: None declared, Tadeja Kuret: None declared, Oliver Distler Grant/research support from: Prof. Distler received research funding from Actelion, Bayer, Boehringer Ingelheim and Mitsubishi Tanabe to investigate potential treatments of scleroderma and its complications, Consultant for: Prof. Distler has/had consultancy relationship within the last 3 years with Actelion, AnaMar, Bayer, Boehringer Ingelheim, ChemomAb, espeRare foundation, Genentech/Roche, GSK, Inventiva, Italfarmaco, iQvia, Lilly, medac, MedImmune, Mitsubishi Tanabe Pharma, Pharmacyclics, Novartis, Pfizer, Sanofi, Serodapharm and UCB in the area of potential treatments of scleroderma and its complications. In addition, he had/has consultancy relationship within the last 3 years with A. Menarini, Amgen, Abbvie, GSK, Mepha, MSD, Pfizer and UCB in the field of arthritides and related disorders, Sasa Cucnik: None declared, Olivier Voinnet: None declared, Snežna Sodin-Semrl: None declared, Matija Tomsic: None declared, Mojca Frank-Bertoncelj : None declared
- Published
- 2019
50. THU0040 USING A NOVEL BEAD-BASED IMMUNOASSAY FOR SIMULTANEOUS DETECTION OF AUTOANTIBODIES AGAINST SERUM AMYLOID A1 AND ALPHA1 ACID GLYCOPROTEIN
- Author
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Katja Lakota, Polonca Mali, Tadeja Kuret, Saša Čučnik, S. Sodin-Semrl, and Matija Tomšič
- Subjects
medicine.diagnostic_test ,business.operation ,biology ,business.industry ,Serum amyloid A1 ,Autoantibody ,medicine.disease ,Octapharma ,medicine.disease_cause ,Autoimmunity ,Antiphospholipid syndrome ,Immunoassay ,Immunology ,biology.protein ,Medicine ,Serum amyloid A ,Antibody ,business - Abstract
Background Naturally occurring autoantibodies (Abs) against acute phase proteins (APPs), such as anti-serum amyloid A1 (SAA1) Abs have already been identified in sera of healthy individuals, as well as in patients with autoimmune diseases (1). Currently however, no method exists for simultaneous detection of multiple Abs against APPs. Objectives To develop a bead-based duplex immunoassay for simultaneous detection of IgG anti-SAA1 and anti-alpha 1 acid glycoprotein (AGP) Abs and quantify their levels in sera of healthy blood donors (HBD), and patients with systemic autoimmune diseases, as well as in intravenous immunoglobulin preparation (IVIg). Methods Fluorescently labeled MagPlex microspheres (Luminex Corp) were used to covalently bind SAA1 and AGP. Sera samples (diluted 1:20) were added to a 96-well microtiter plate and incubated with SAA1- and AGP-coupled microspheres for 2h. Subsequently, PE-conjugated anti-human IgG Abs were added to each well, incubated for 30 min, resuspended in PBS-1%BSA and analysed using the MagPix system (Biomedica, GmbH). Sera samples were collected from HBD (n=55), patients with giant cell arteritis (GCA; n=30), immunoglobulin A vasculitis (IgAV; n=30), systemic lupus erythematosus (SLE; n=20), systemic sclerosis (SSc; n=27), antiphospholipid syndrome (APS; n=19) and early rheumatoid arthritis (ERA; n=20). Ab levels were determined also in IVIg (Octapharma AG). Results We observed the presence of both, anti-SAA1, and anti-AGP Abs in sera of HBD, as well as in patients with GCA, IgAV, SLE, SSc, APS and ERA. GCA patients had significantly higher anti-SAA1 levels (median (IQR) MFI was 2163 (1113- 3048)) as compared to SSc (816 (480-1462); p Substantial amounts of anti-SAA1 Abs were observed in serially diluted IVIg, while there were ∼4-fold less anti-AGP Abs detected (Figure 2), which corresponds also to the ratio found in HBD (Figure 1). Conclusion Serum IgG Abs against SAA1 and AGP present in HBD, patients with systemic autoimmune diseases and in IVIg can be simultaneously quantified using a customized bead-based multiplex assay. These natural autoAbs found in IVIg could be endogenous immune-regulators of the acute phase response. Acknowledgement The authors would like to acknowledge funding from the Slovenian Research Agency (ARRS) for the National Research Program P3-0314. Reference [1] Lakota K, et al. Could antibodies against serum amyloid A function as physiological regulators in humans? Autoimmunity 2011;44: 149-58. Disclosure of Interests None declared
- Published
- 2019
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