17 results on '"Katharina Sarnow"'
Search Results
2. Investigation of the role of impurities typical in secondary raw materials on the behaviour of high alumina castables - Part II: Influence on thermomechanical behaviour
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Jacek Podwórny, Karolina Dudek, Magdalena Kujawa, Robert Kusiorowski, Erwan Brochen, Christian Dannert, Olaf Krause, Laura Erbar, and Katharina Sarnow
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Refractories ,Thermo-mechanical properties ,Clay industries. Ceramics. Glass ,TP785-869 - Abstract
The present work investigated the effect of relatively small additions of impurities originating in secondary raw materials on the thermomechanical properties of alumina castables bonded with active alumina. Castable compositions containing impurities for testing were selected on the basis of predictions from thermochemical calculations of their phase composition and the formation of large amounts of liquid phase at the temperature of 1600 °C. Viscosity of the emerging liquid phase was also calculated. The selected alumina castables with impurities from the systems: CaO–SiO2. Na2O–SiO2. Fe2O3–CaO. Fe2O3–CaO–SiO2 and TiO2–CaO–SiO2 were tested for thermomechanical properties by analysing the effect of impurities on refractoriness under load (RUL) creep in compression (CiC) and resonant frequencies and damping changes versus temperature (RFDA). Real composition of tested material via high temperature X-ray diffraction (HT-XRD) were verified. The obtained results indicate that impurities introduced into the refractory castables in a total amount of 0,18 wt% (2% in the fraction 0–45 μm) and in the most unfavourable ratio from the point of view of phase equilibria have an observable effect on the properties of the material at elevated temperature. The obtained results show that in the case of introducing impurities into the material with mutual proportions of shares limiting the formation of the liquid phase. It will be possible to maintain the thermomechanical properties of alumina castables at a satisfactory level (compared to the pure one) from the industrial process perspective in which it will be used. The obtained results shed new light on the possibilities of the conscious use of secondary raw materials in refractory monolithics technology.
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- 2023
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3. Variants in exons 5 and 6 of ACTB cause syndromic thrombocytopenia
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Sharissa L. Latham, Nadja Ehmke, Patrick Y. A. Reinke, Manuel H. Taft, Dorothee Eicke, Theresia Reindl, Werner Stenzel, Michael J. Lyons, Michael J. Friez, Jennifer A. Lee, Ramona Hecker, Michael C. Frühwald, Kerstin Becker, Teresa M. Neuhann, Denise Horn, Evelin Schrock, Indra Niehaus, Katharina Sarnow, Konrad Grützmann, Luzie Gawehn, Barbara Klink, Andreas Rump, Christine Chaponnier, Constanca Figueiredo, Ralf Knöfler, Dietmar J. Manstein, and Nataliya Di Donato
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Science - Abstract
Genetic variants in ACTB and ACTG1 have been associated with Baraitser-Winter Cerebrofrontofacial syndrome. Here, the authors report of a syndromic thrombocytopenia caused by variants in ACTB exons 5 or 6 that compromise the organization and coupling of the cytoskeleton, leading to impaired platelet maturation.
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- 2018
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4. Author Correction: Variants in exons 5 and 6 of ACTB cause syndromic thrombocytopenia
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Sharissa L. Latham, Nadja Ehmke, Patrick Y. A. Reinke, Manuel H. Taft, Dorothee Eicke, Theresia Reindl, Werner Stenzel, Michael J. Lyons, Michael J. Friez, Jennifer A. Lee, Ramona Hecker, Michael C. Frühwald, Kerstin Becker, Teresa M. Neuhann, Denise Horn, Evelin Schrock, Indra Niehaus, Katharina Sarnow, Konrad Grützmann, Luzie Gawehn, Barbara Klink, Andreas Rump, Christine Chaponnier, Constanca Figueiredo, Ralf Knöfler, Dietmar J. Manstein, and Nataliya Di Donato
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Science - Abstract
The original version of this Article contained an error in Figure 4. In panel i, the lower CYA and α-SMA images were inadvertently inverted. This has been corrected in both the PDF and HTML versions of the Article.
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- 2018
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5. GAP43-dependent mitochondria transfer from astrocytes enhances glioblastoma tumorigenicity
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Dionysios C. Watson, Defne Bayik, Simon Storevik, Shannon Sherwin Moreino, Samuel A. Sprowls, Jianhua Han, Mina Thue Augustsson, Adam Lauko, Palavalasa Sravya, Gro Vatne Røsland, Katie Troike, Karl Johan Tronstad, Sabrina Wang, Katharina Sarnow, Kristen Kay, Taral R. Lunavat, Daniel J. Silver, Sahil Dayal, Justin Vareecal Joseph, Erin Mulkearns-Hubert, Lars Andreas Rømo Ystaas, Gauravi Deshpande, Joris Guyon, Yadi Zhou, Capucine R. Magaut, Juliana Seder, Laura Neises, Sarah E. Williford, Johannes Meiser, Andrew J. Scott, Peter Sajjakulnukit, Jason A. Mears, Rolf Bjerkvig, Abhishek Chakraborty, Thomas Daubon, Feixiong Cheng, Costas A. Lyssiotis, Daniel R. Wahl, Anita B. Hjelmeland, Jubayer A. Hossain, Hrvoje Miletic, and Justin D. Lathia
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Cancer Research ,Oncology - Abstract
The transfer of intact mitochondria between heterogeneous cell types has been confirmed in various settings, including cancer. However, the functional implications of mitochondria transfer on tumor biology are poorly understood. Here we show that mitochondria transfer is a prevalent phenomenon in glioblastoma (GBM), the most frequent and malignant primary brain tumor. We identified horizontal mitochondria transfer from astrocytes as a mechanism that enhances tumorigenesis in GBM. This transfer is dependent on network-forming intercellular connections between GBM cells and astrocytes, which are facilitated by growth-associated protein 43 (GAP43), a protein involved in neuron axon regeneration and astrocyte reactivity. The acquisition of astrocyte mitochondria drives an increase in mitochondrial respiration and upregulation of metabolic pathways linked to proliferation and tumorigenicity. Functionally, uptake of astrocyte mitochondria promotes cell cycle progression to proliferative G2/M phases and enhances self-renewal and tumorigenicity of GBM. Collectively, our findings reveal a host–tumor interaction that drives proliferation and self-renewal of cancer cells, providing opportunities for therapeutic development.
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- 2023
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6. Deciphering Human Glioblastoma Invasion Using a Developmental Mature Rat Brain Organoid Model
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Wenjing Zhou, Elena Martinez-Garcia, Katharina Sarnow, Georgia Kanli, Petr Nazarov, Stephanie G. Schwab, Johannes Meiser, Christian Jäger, Jakub Mieczkowski, Frits A. Thorsen, Konrad Grützmann, Boris Mihaljevic, Barbara van Loon, Jubayer A. Hossain, Anna Golebiewska, Simone Niclou, Magnar Bjørås, Saverio Tardito, Justin Vareecal Joesph, Taral R. Lunavat, Halala Sdik Saed, Marzieh Bahador, Minghzi Han, Carina Fabian, Hrvoje Miletic, Xingang Li, Jian Wang, Gunnar Dittmar, Olivier Keunen, Barbara Klink, and Rolf Bjerkvig
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History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
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7. EXTH-32. NOVEL THIORIDAZINE DERIVATES: ANTIPROLIFERATIVE AND APOPTOSIS-INDUCING ACTIVITY ON GLIOBLASTOMA CELLS IN VITRO
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Stephanie Schwab, Katharina Sarnow, Eirin Alme, Roland Goldbrunner, Hans-René Bjørsvik, and Rolf Bjerkvig
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Cancer Research ,Oncology ,Neurology (clinical) ,26th Annual Meeting & Education Day of the Society for Neuro-Oncology - Abstract
BACKGROUND Although withdrawn from the market due to cardiotoxicity, we showed that the antipsychotic drug Thioridazine shows chemosensitizing effects in combination with Temozolomide (TMZ) for the treatment of glioblastoma multiforme (GBM). Based on our prior observations, the aim of this study was through medicinal chemistry, to design and synthesize new compounds based on Thioridazines tricyclic structure, and to determine their therapeutic potential. METHODS Fourteen compounds were synthesized where variations were made within the tricyclic side chains. The newly synthesized compounds were screened for therapeutic efficacy with or without TMZ using a WST-1 cell viability assay and real-time imaging system (IncuCyte). Tests were performed on both monolayer cell cultures, as well as on glioma stem cell spheroids (GSC). The therapeutic effects were also studied on human astrocytes (NHA) as well as on rat brain organoids (BO). Annexin V/propidium iodide (PI) double staining followed by flow cytometric analysis was performed after 48 hours of treatment. RESULTS Following an extensive screening, we identified two novel compounds (EA01 and EA02) that at concentrations of 4 and 9.5 µM showed a strong cytotoxicity on GBM cell lines (U-87 MG p< 0,0001, U251 p< 0,0001, LN18 p= 0,0004) as well as on glioma stem cells (GSC) (P3 p< 0,0001) compared to NHA and BOs respectively. Also, when BOs were confronted with GSC spheres in an invasion assay, a selective cytotoxicity was observed in the GSCs. Mechanistically, we show that both compounds induce apoptosis in GBM cells. Moreover, intravenous delivery of increasing concentrations of EA01 and EA02 revealed no toxicity in animals at concentrations up to 21 mg/kg. CONCLUSION We developed two new tricyclic therapeutic compounds that show a strong selective cytotoxicity in GBM cells with limited systemic toxicity in animals. Ongoing studies are investigating the therapeutic potential of EA01 and EA02 in orthotopic xenografts in vivo.
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- 2021
8. TAMI-24. INHIBITION OF GBM INVASION BY THE Α-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID (AMPA) GLUTAMATE RECEPTOR ANTAGONIST PERAMPANEL
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Katharina Sarnow, Georgia Kanli, Olivier Keunen, and Rolf Bjerkvig
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Cancer Research ,Oncology ,Neurology (clinical) ,26th Annual Meeting & Education Day of the Society for Neuro-Oncology - Abstract
BACKGROUND Extensive tumor cell invasion within the brain represents a major problem for effective treatment of glioblastomas (GBMs). The invasive processes can be divided into three types: Collective cell invasion, perivascular infiltration, and single-cell invasion into the brain parenchyma. GBM cells can form synapses with neural cells pointing at an extensive communication network between brain and GBM cells which can be mediated via the metabolites Glutamine and Glutamate both needed for GBM cell proliferation. In this context, it has been shown in preclinical models that Perampanel, an antiepileptic agent, functioning as non-competitive α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) glutamate receptor antagonist, has an inhibitory effect on GBM growth. To delineate how Perampanel affects GBM invasion, we utilised a highly characterized 3D GBM-brain organoid invasion model where single-cell invasion was studied in real-time following Perampanel treatment. METHODS A brain coculture model, consisting of rat brain organoids expressing various markers of the human adult brain, where confronted with GFP-labelled tumor cells. By using time-lapse confocal microscopy, we quantified single-cell invasion patterns and speed of invasion using two glioma stem cell models (BG5 and BG7). RESULTS Perampanel treatment significantly reduces tumor cell invasion into the brain organoids with the strongest effect seen in the most invasive GBM (BG5). The single-tumor cell invasion ratio was reduced by 72 % compared to the control (p= 0.0033). In contrast, collective cell invasion was reduced by 19 % (p= 0.028). Statistical analysis was performed using an unpaired sample t-test. CONCLUSION The AMPA glutamate receptor antagonist Perampanel significantly inhibits GBM invasion, suggesting an important role of the glutamate-glutamine cycle between the GBM cells and neurons in the invasion process. Moreover, this communication and exchange of metabolites seem to be more prominent where single GBM cells invade into the brain parenchyma compared to areas where collective invasion take place.
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- 2021
9. Variants in exons 5 and 6 of ACTB cause syndromic thrombocytopenia
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Michael C. Frühwald, Constanca Figueiredo, Barbara Klink, Christine Chaponnier, Ramona Hecker, Nadja Ehmke, Luzie Gawehn, P. Reinke, Theresia Reindl, Sharissa L. Latham, Katharina Sarnow, Dietmar J. Manstein, Werner Stenzel, Konrad Grützmann, Indra Niehaus, Michael J. Friez, Ralf Knöfler, Denise Horn, Nataliya Di Donato, Kerstin Becker, Jennifer A. Lee, Evelin Schröck, Michael J. Lyons, Manuel H. Taft, Teresa Neuhann, Andreas Rump, and Dorothee Eicke
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0301 basic medicine ,Genetics ,Microcephaly ,Multidisciplinary ,ACTG1 ,biology ,Platelet maturation ,Science ,fungi ,General Physics and Astronomy ,General Chemistry ,medicine.disease ,Phenotype ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Exon ,030104 developmental biology ,Germline mutation ,biology.protein ,medicine ,lcsh:Q ,Actin-binding protein ,lcsh:Science ,Actin - Abstract
Germline mutations in the ubiquitously expressed ACTB, which encodes β-cytoplasmic actin (CYA), are almost exclusively associated with Baraitser-Winter Cerebrofrontofacial syndrome (BWCFF). Here, we report six patients with previously undescribed heterozygous variants clustered in the 3′-coding region of ACTB. Patients present with clinical features distinct from BWCFF, including mild developmental disability, microcephaly, and thrombocytopenia with platelet anisotropy. Using patient-derived fibroblasts, we demonstrate cohort specific changes to β-CYA filament populations, which include the enhanced recruitment of thrombocytopenia-associated actin binding proteins (ABPs). These perturbed interactions are supported by in silico modeling and are validated in disease-relevant thrombocytes. Co-examination of actin and microtubule cytoskeleton constituents in patient-derived megakaryocytes and thrombocytes indicates that these β-CYA mutations inhibit the final stages of platelet maturation by compromising microtubule organization. Our results define an ACTB-associated clinical syndrome with a distinct genotype-phenotype correlation and delineate molecular mechanisms underlying thrombocytopenia in this patient cohort. Genetic variants in ACTB and ACTG1 have been associated with Baraitser-Winter Cerebrofrontofacial syndrome. Here, the authors report of a syndromic thrombocytopenia caused by variants in ACTB exons 5 or 6 that compromise the organization and coupling of the cytoskeleton, leading to impaired platelet maturation.
- Published
- 2018
10. P13.08 Novel Thioridazine derivates: Antiproliferative and apoptosis-inducing activity on glioblastoma cells in vitro
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Katharina Sarnow, Stephanie Schwab, Roland Goldbrunner, Hans-René Bjørsvik, Eirin Alme, and Rolf Bjerkvig
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Cancer Research ,Temozolomide ,Chemistry ,Thioridazine ,medicine.disease ,In vitro ,Oncology ,Apoptosis ,Cell culture ,Glioma ,medicine ,Cancer research ,Neurology (clinical) ,Annexin A5 ,Cytotoxicity ,medicine.drug - Abstract
BACKGROUND Although withdrawn from the market due to cardiotoxicity, we have shown that the antipsychotic drug Thioridazine shows chemosensitizing effects in combination with Temozolomide (TMZ) for the treatment of glioblastoma multiforme (GBM). Based on our prior observations, the aim of the presented project was through medicinal chemistry, to design and synthesize new compounds based on Thioridazines tricyclic structure, and to determine their therapeutic potential. MATERIAL AND METHODS Fourteen compounds were synthesized where variations were made within the tricyclic side chains. The newly synthesized compounds were screened for therapeutic efficacy with or without TMZ using a WST-1 cell viability assay as well as a real-time imaging system (IncuCyte). Tests were performed on both monolayer cell cultures, as well as on glioma stem cell spheroids (GSC). The therapeutic effects were also studied on human astrocytes (NHA) as well as on rat brain organoids (BO). Annexin V/propidium iodide (PI) double staining followed by flow cytometric analysis was performed after 48 hours of treatment. RESULTS Following an extensive screening, we identified two novel compounds (EA01 and EA02) that at concentrations of 4 and 9.5 µM showed a strong cytotoxicity on GBM cell lines (U-87 MG p CONCLUSION We have developed two new tricyclic therapeutic compounds that show a strong selective cytotoxicity in GBM cells with limited systemic toxicity in animals. Ongoing studies are investigating the therapeutic potential of EA01 and EA02 in orthotopic xenografts in vivo.
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- 2021
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11. P15.02 Loss of Williams Syndrome Transcription Factor (WSTF) leads to improved temozolomide sensitivity in human glioblastoma cells irrespective of MGMT expression
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Joydeep Mukherjee, Tor-Christian Johannessen, Stephanie Schwab, Rolf Bjerkvig, Katharina Sarnow, and Oline Rio
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Cancer Research ,Temozolomide ,Methyltransferase ,DNA damage ,business.industry ,O-6-methylguanine-DNA methyltransferase ,medicine.disease ,Chromatin ,Poster Presentations ,Oncology ,Cell culture ,Cancer research ,medicine ,Neurology (clinical) ,Williams syndrome ,business ,Transcription factor ,medicine.drug - Abstract
BACKGROUND The prognosis for newly diagnosed adult glioblastoma multiforme (GBM) patients is poor even after standard therapy with a median survival of approximately 14–15 months. The DNA repair protein O 6 -methylguanine-DNA methyltransferase (MGMT) efficiently counteracts formation of the most lethal DNA adducts by temozolomide (TMZ) chemotherapy, and is thus associated with poor outcome in GBM patients. Williams Syndrome Transcription Factor (WSTF) has previously been suggested to regulate the DNA damage response pathway (DDR) in both an indirect (through chromatin remodeling together with SMARCA5 in the WICH complex) and direct manner (by phosphorylating H2AX at Tyr142). However, whether WSTF has any role in the development of resistance against chemotherapy through its ability to regulate the DDR in GBMs, is so far not known. In this study, we investigated whether loss of WSTF sensitizes different MGMT-proficient and -deficient GBM cell lines to TMZ treatment. MATERIAL AND METHODS We generated WSTF knockout clones from both MGMT-proficient (LN18, T98G) and -deficient GBM cell lines (U-251) using CRISPR/Cas9 gene-editing technology with lentiviral vectors. The PCR-based screening results combined with the T7 endonuclease mismatch assay for bi-allelic monoclonal knockouts were verified via sequencing and immunoblotting to identify candidate knockout clones. For each cell line, three knockout clones were chosen for further investigation. Colony formation assays were performed to determine the survival ability in response to TMZ treatment. Statistical analysis was performed using two-way ANOVA. RESULTS WSTF knockout clones showed a significant decrease in colony formation after TMZ-treatment compared to the corresponding WSTF-expressing control groups (non-target single guide RNA) (LN18: Clone 59 vs control: p= 0.0456, T98G: All three studied clones vs control: p CONCLUSION WSTF is an important factor in both MGMT de- and proficient GBM cell lines for response against TMZ chemotherapy. The loss of WSTF leads to a significantly increased TMZ sensitivity in clinically relevant concentrations for all the studied cell lines. Ongoing studies are investigating the underlying mechanisms and potential alterations in the DDR pathway caused by WSTF loss.
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- 2021
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12. P13.16 Metastatic potential of systemic glioblastoma stem cell lines in vivo
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Jubayer A Hossain, Stephanie Schwab, Katharina Sarnow, Hrvoje Miletic, Frits Thorsen, Roland Goldbrunner, and Rolf Bjerkvig
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Cancer Research ,Oncology ,In vivo ,Cancer research ,medicine ,Stem cell line ,Neurology (clinical) ,Biology ,medicine.disease ,Glioblastoma - Abstract
BACKGROUND Despite aggressive tumor behavior, extracranial metastases rarely develop in glioblastoma (GBM) patients. Two potential explanations have been suggested: 1) The blood-brain-barrier functions as a physical barrier that prevents the dissemination of GBM cells out of the central nervous system (CNS) or 2) that extracranial metastasis do occur, but the patients die before extracranial metastases manifest themselves. The first theory has been questioned based on the fact that circulating tumor cells (CTC) were found in blood samples of GBM patients without systemic metastases. To date it has not been proven if CTCs are able to reenter the brain and to what extent they are able to form systemic extracranial metastatic lesions. Therefore, the current study aimed at analyzing the dissemination patterns and the underlying mechanisms associated with the ability of GBM CTCs to form extracranial metastases. MATERIAL AND METHODS Five highly characterized human GBM stem cell (GSC) lines (P3, BG5, BG7, GG6, GG16), displaying GBM CNV patterns, were intracranially implanted in a first cohort, then transduced with a lentiviral Firefly Luciferase-eGFP vector and injected into the left cardiac ventricle of NOD/SCID mice in a second cohort. Mice were observed closely and tumor burden was assessed using in vivo as well as ex vivo bioluminescence imaging, MRI and PET. Mice were euthanized when the objective endpoint criteria (tumor burden) was met, then organs were harvested and fixed for further analysis. RESULTS First, a detailed characterization of the GSC line invasion patterns were assessed when grown as orthotopic xenografts in vivo dividing them into three categories: 1) Highly invasive without apparent angiogenesis (BG5) 2) Invasive with perivascular infiltration and angiogenesis (P3, BG7 and GG16) and 3) Angiogenic and highly circumscribed (GG6). Following intracardial injection, (7 out of 8) P3 animals developed extracranial and intracranial tumors with a distinctive pattern. Brain, adrenal gland, ovary and liver were amongst the organs most susceptible for tumor growth in the P3 group. For the BG5 and BG7 cell lines, no metastases were observed whereas only 1 animal out of 10 developed metastases in both groups GG16 and GG6. CONCLUSION Only one out of 5 GSC lines exhibited a strong metastatic potential when injected into the left cardiac ventricle. Compared to other tumors which exhibit a strong metastatic potential from the circulation, GSC lines do only to a very limited extent show this potential reflecting observations made in the clinic.
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- 2021
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13. OS06.6A Inhibition of GBM invasion by the α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) glutamate receptor antagonist Perampanel
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Olivier Keunen, Rolf Bjerkvig, Georgia Kanli, and Katharina Sarnow
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Cancer Research ,Perampanel ,chemistry.chemical_compound ,Oncology ,Chemistry ,Oral Presentations ,Neurology (clinical) ,AMPA receptor ,Glutamate receptor antagonist ,Pharmacology - Abstract
BACKGROUND Extensive tumor cell invasion within the brain represents a major problem for effective treatment of glioblastomas (GBMs). The invasive processes can be divided into three types: Collective cell invasion, perivascular infiltration and single-cell invasion into the brain parenchyma. It has recently been shown that GBM cells have the ability to form synapses with neural cells pointing at an extensive communication network between brain cells GBM cells. This communication network can be mediated via the metabolites glutamine and glutamate both needed for GBM cell proliferation. In this context, it has been shown in preclinical models that Perampanel, an antiepileptic agent, functioning as non-competitive α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) glutamate receptor antagonist, has an inhibitory effect on GBM growth. In order to delineate how Perampanel affects GBM invasion, we here utilised a highly characterized 3D GBM-brain organoid invasion model where single-cell invasion was studied in real-time following Perampanel treatment. MATERIAL AND METHODS A brain coculture model, consisting of rat brain organoids expressing various markers of the human adult brain, where confronted with GFP-labelled tumor cells. By using time-lapse confocal microscopy, we quantified single-cell invasion patterns and speed of invasion using two glioma stem cell models (GSCs; BG5 and BG7). RESULTS Perampanel treatment significantly reduces tumor cell invasion into the brain organoids with the strongest effect seen in the most invasive GBM (BG5). Here, the single-tumor cell invasion ratio was reduced by 72 % compared to the control group (p=0.0033). In contrast, collective cell invasion was reduced by 19 % (p=0.028). Statistical analysis was performed using an unpaired sample t-test. CONCLUSION The AMPA glutamate receptor antagonist Perampanel significantly inhibits GBM invasion, suggesting an important role of the glutamate-glutamine cycle between the GBM cells and neurons in the invasion process. Moreover, this communication and exchange of metabolites seems to be more prominent where single GBM cells invade into the brain parenchyma compared to areas where collective invasion take place.
- Published
- 2021
- Full Text
- View/download PDF
14. Thrombocytopenia Microcephaly Syndrome - a novel phenotype associated with ACTB mutations
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Jennifer A. Lee, P. Reinke, Michael J. Lyons, Manuel H. Taft, Teresa Neuhann, Ramona Hecker, Michael C. Fruehwald, Sharissa L. Latham, Konrad Gruetzmann, Nadja Ehmke, Ralf Knoefler, Evelin Schröck, Dietmar J. Manstein, Katharina Sarnow, Barbara Klink, Michael J. Friez, Denise Horn, Christine Chaponnier, Luzie Gawehn, Andreas Rump, Nataliya Di Donato, and Kerstin Becker
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Genetics ,Microcephaly ,education.field_of_study ,biology ,Population ,medicine.disease ,Phenotype ,biology.protein ,medicine ,Thrombopoiesis ,Actin-binding protein ,Cytoskeleton ,education ,Actin ,Mild microcephaly - Abstract
Introductory paragraphUntil recently missense germ-line mutations inACTB, encoding the ubiquitously expressed β-cytoplasmic actin (CYA), were exclusively associated with Baraitser-Winter Cerebrofrontofacial syndrome (BWCFF), a complex developmental disorder1,2. Here, we report six patients with previously undescribed heterozygous variants clustered in the 3’-coding region ofACTB. These patients present with clinical features different from BWCFF, including thrombocytopenia, microcephaly, and mild developmental disability. Patient derived cells are morphologically and functionally distinct from controls. Assessment of cytoskeletal constituents identified a discrete filament population altered in these cells, which comprises force generating and transmitting actin binding proteins (ABP) known to be associated with thrombocytopenia3–8.In silicomodelling and molecular dynamics (MD)-simulations support altered interactions between these ABP and mutant β-CYA. Our results describe a new clinical syndrome associated withACTBmutations with a distinct genotype-phenotype correlation, identify a cytoskeletal protein interaction network crucial for thrombopoiesis, and provide support for the hypomorphic nature of these actinopathy mutations.
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- 2018
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15. Subtyping of the Legionella pneumophila 'Ulm' outbreak strain using the CRISPR–Cas system
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Elzbieta Brzuszkiewicz, Kerstin Rydzewski, Christian Lück, Andreas Essig, Katharina Sarnow, Tetyana Koshkolda, and Klaus Heuner
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Microbiology (medical) ,Genomic Islands ,Genotype ,Biology ,Microbiology ,Legionella pneumophila ,Disease Outbreaks ,03 medical and health sciences ,Germany ,Genomic island ,Environmental Microbiology ,medicine ,Humans ,030304 developmental biology ,Whole genome sequencing ,Molecular Epidemiology ,0303 health sciences ,Molecular epidemiology ,030306 microbiology ,Genetic Variation ,Outbreak ,General Medicine ,Spacer DNA ,medicine.disease ,biology.organism_classification ,Virology ,Subtyping ,3. Good health ,Infectious Diseases ,Legionnaires' disease ,CRISPR-Cas Systems ,Legionnaires' Disease - Abstract
In 2009/2010 an outbreak of Legionnaires' disease with 64 cases including four fatalities took place in the city of Ulm/Neu-Ulm in Germany. L. pneumophila serogroup 1, mAb type Knoxville, sequence type (ST) 62 was identified as the epidemic strain. This strain was isolated from eight patients and from a cooling tower in the city of Ulm. Based on whole genome sequencing data from one patient strain, we identified an Lvh type IV secretion system containing a CRISPR-Cas system. The CRISPR sequence contains 38 spacer DNA sequences. We used these variable DNA spacers to further subtype the outbreak strain as well as six epidemiologically unrelated strains of CRISPR-Cas positive ST62 strains isolated at various regions in Germany. The first 12 spacer DNAs of eight patient isolates and three environmental isolates from the suspected source of infection were analyzed and found to be identical. Spacer DNAs were identified in further six epidemiologically unrelated patient isolates of L. pneumophila of ST62 in addition to the 12 "core" spacers. The presence of new spacer DNAs at the 5' site downstream of the first repeat indicates that these CRISPR-Cas systems seem to be functional. PCR analysis revealed that not all L. pneumophila sg1 ST62 strains investigated exhibited a CRISPR-Cas system. In addition, we could demonstrate that the CRISPR-Cas system is localized on a genomic island (LpuGI-Lvh) which can be excised from the chromosome and therefore may be transferable horizontally to other L. pneumophila strains.
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- 2015
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16. PUF60-SCRIB fusion transcript in a patient with 8q24.3 microdeletion and atypical Verheij syndrome
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Evelin Schröck, Andreas Tzschach, Karl Hackmann, Katharina Sarnow, Dalia Abdin, N. Di Donato, and Andreas Rump
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0301 basic medicine ,SCRIB ,Microcephaly ,Adolescent ,030105 genetics & heredity ,Biology ,Short stature ,Fusion gene ,Chromosome Breakpoints ,03 medical and health sciences ,Intellectual Disability ,Genetics ,medicine ,Humans ,RNA, Messenger ,Megalencephaly ,Genetics (clinical) ,Coloboma ,Tumor Suppressor Proteins ,Breakpoint ,Membrane Proteins ,Syndrome ,General Medicine ,medicine.disease ,Repressor Proteins ,030104 developmental biology ,Scoliosis ,Fusion transcript ,Female ,RNA Splicing Factors ,Chromosome Deletion ,Gene Fusion ,medicine.symptom ,Chromosomes, Human, Pair 8 - Abstract
Expression of the fusion genes is considered to be an important mechanism of tumorigenesis. However it is hardly ever discussed in relation to the neurodevelopmental disorders. Here we report on an 18-years-old female patient with 13.1 kb deletion of 8q24.3 fusing the 5′-portion of SCRIB with the 3′-portion of PUF60 and presenting with borderline intellectual disability, eye coloboma, short stature, scoliosis, heart defects and interestingly postnatal megalencephaly, in contrast to microcephaly, which is usually associated with 8q24.3 deletion (Verheij syndrome). Using next generation sequencing we mapped the breakpoints at nucleotide resolution and showed that the deletion preserved the reading frame. In contrast to the laborious techniques previously used for the precise mapping of deletion breakpoints, our approach identified an accurate interval very rapidly. We demonstrated the expression of the PUF60-SCRIB fusion gene in patient's cells and suggest that the fusion transcript might be a cause of the atypical clinical presentation.
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- 2019
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17. Author Correction: Variants in exons 5 and 6 of ACTB cause syndromic thrombocytopenia
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Nataliya Di Donato, Kerstin Becker, Michael J. Friez, Christine Chaponnier, Michael C. Frühwald, Constanca Figueiredo, Evelin Schröck, Barbara Klink, Werner Stenzel, Katharina Sarnow, Konrad Grützmann, Sharissa L. Latham, Michael J. Lyons, Manuel H. Taft, Andreas Rump, Indra Niehaus, Jennifer A. Lee, Teresa Neuhann, Theresia Reindl, P. Reinke, Nadja Ehmke, Ramona Hecker, Dietmar J. Manstein, Dorothee Eicke, Ralf Knöfler, Luzie Gawehn, and Denise Horn
- Subjects
0301 basic medicine ,Blood Platelets ,Male ,Genotype ,Science ,General Physics and Astronomy ,Computational biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,Exon ,Text mining ,Medicine ,Humans ,Author Correction ,lcsh:Science ,Cells, Cultured ,Cytoskeleton ,Germ-Line Mutation ,Multidisciplinary ,business.industry ,General Chemistry ,Exons ,Thrombocytopenia ,Actins ,030104 developmental biology ,Phenotype ,Mutation ,ComputingMethodologies_DOCUMENTANDTEXTPROCESSING ,Female ,lcsh:Q ,business ,Megakaryocytes - Abstract
Germline mutations in the ubiquitously expressed ACTB, which encodes β-cytoplasmic actin (CYA), are almost exclusively associated with Baraitser-Winter Cerebrofrontofacial syndrome (BWCFF). Here, we report six patients with previously undescribed heterozygous variants clustered in the 3′-coding region of ACTB. Patients present with clinical features distinct from BWCFF, including mild developmental disability, microcephaly, and thrombocytopenia with platelet anisotropy. Using patient-derived fibroblasts, we demonstrate cohort specific changes to β-CYA filament populations, which include the enhanced recruitment of thrombocytopenia-associated actin binding proteins (ABPs). These perturbed interactions are supported by in silico modeling and are validated in disease-relevant thrombocytes. Co-examination of actin and microtubule cytoskeleton constituents in patient-derived megakaryocytes and thrombocytes indicates that these β-CYA mutations inhibit the final stages of platelet maturation by compromising microtubule organization. Our results define an ACTB-associated clinical syndrome with a distinct genotype-phenotype correlation and delineate molecular mechanisms underlying thrombocytopenia in this patient cohort., Genetic variants in ACTB and ACTG1 have been associated with Baraitser-Winter Cerebrofrontofacial syndrome. Here, the authors report of a syndromic thrombocytopenia caused by variants in ACTB exons 5 or 6 that compromise the organization and coupling of the cytoskeleton, leading to impaired platelet maturation.
- Published
- 2018
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