33 results on '"Karan M, Shah"'
Search Results
2. JD-312 – A novel small molecule that facilitates cartilage repair and alleviates osteoarthritis progression
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Jingduo Gao, Haixiang Pei, Fang Lv, Xin Niu, Yu You, Liang He, Shijia Hu, Karan M. Shah, Mingyao Liu, Yihua Chen, Bing Du, Hai Xiong, and Jian Luo
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Small molecule ,MSCs ,Osteoarthritis ,Cartilage ,Regeneration ,Repair ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Background: The chondrogenic differentiation of mesenchymal stem cells (MSCs) to enhance cartilage repair and regeneration is a promising strategy to alleviate osteoarthritis (OA) progression. Method: The potency of JD-312 in inducing chondrogenic differentiation of MSCs was assessed and verified. The efficacy of JD-312-treated MSCs was evaluated using a Sprague–Dawley rat DMM model. Additionally, the capacity of JD-312 to successfully recruit bone marrow-derived mesenchymal stem cells (BMSCs) for the treatment of OA in vitro was confirmed via intra-articular injection. The repair status of the articular cartilage was analyzed in vivo through histological examination. Result: In this study, we identify JD-312 as a novel non-toxic small molecule that can promote chondrogenic differentiation in human umbilical cord-derived MSCs (hUCMSCs) and human bone marrow MSCS (hBMSCs) in vitro. We also show that transient differentiation of MSCs with JD-312 prior to in vivo administration remarkably improves the regeneration of cartilage and promotes Col2a1 and Acan expression in rat models of DMM, in comparison to kartogenin (KGN) pre-treatment or MSCs alone. Furthermore, direct intra-articular injection of JD-312 in murine model of OA showed reduced loss of articular cartilage and improved pain parameters. Lastly, we identified that the effects of JD-312 are at least in part mediated via upregulation of genes associated with the focal adhesion, PI3K-Akt signaling and the ECM-receptor interaction pathways, and specifically cartilage oligomeric matrix protein (COMP) may play a vital role. Conclusion: Our study demonstrated that JD-312 showed encouraging repair effects for OA in vivo. The translational potential of this article: Together, our findings demonstrate that JD-312 is a promising new therapeutic molecule for cartilage regeneration with clinical potential.
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- 2024
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3. Prospects and Current Challenges of Extracellular Vesicle-Based Biomarkers in Cancer
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Samuel R. Lawrence and Karan M. Shah
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extracellular vesicles ,biomarker ,liquid biopsy ,cancer diagnosis ,Biology (General) ,QH301-705.5 - Abstract
Cancer continues to impose a substantial global health burden, particularly among the elderly, where the ongoing global demographic shift towards an ageing population underscores the growing need for early cancer detection. This is essential for enabling personalised cancer care and optimised treatment throughout the disease course to effectively mitigate the increasing societal impact of cancer. Liquid biopsy has emerged as a promising strategy for cancer diagnosis and treatment monitoring, offering a minimally invasive method for the isolation and molecular profiling of circulating tumour-derived components. The expansion of the liquid biopsy approach to include the detection of tumour-derived extracellular vesicles (tdEVs) holds significant therapeutic opportunity. Evidence suggests that tdEVs carry cargo reflecting the contents of their cell-of-origin and are abundant within the blood, exhibiting superior stability compared to non-encapsulated tumour-derived material, such as circulating tumour nucleic acids and proteins. However, despite theoretical promise, several obstacles hinder the translation of extracellular vesicle-based cancer biomarkers into clinical practice. This critical review assesses the current prospects and challenges facing the adoption of tdEV biomarkers in clinical practice, offering insights into future directions and proposing strategies to overcome translational barriers. By addressing these issues, EV-based liquid biopsy approaches could revolutionise cancer diagnostics and management.
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- 2024
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4. GPRC5B protects osteoarthritis by regulation of autophagy signaling
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Liang He, Ziwei Xu, Xin Niu, Rong Li, Fanhua Wang, Yu You, Jingduo Gao, Lei Zhao, Karan M. Shah, Jian Fan, Mingyao Liu, and Jian Luo
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Osteoarthritis ,GPRC5B ,Cartilage ,Chondrocyte ,Cartilage anabolism and catabolism ,Cartilage regeneration ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Osteoarthritis (OA) is one of the most common chronic diseases in the world. However, current treatment modalities mainly relieve pain and inhibit cartilage degradation, but do not promote cartilage regeneration. In this study, we show that G protein-coupled receptor class C group 5 member B (GPRC5B), an orphan G-protein-couple receptor, not only inhibits cartilage degradation, but also increases cartilage regeneration and thereby is protective against OA. We observed that Gprc5b deficient chondrocytes had an upregulation of cartilage catabolic gene expression, along with downregulation of anabolic genes in vitro. Furthermore, mice deficient in Gprc5b displayed a more severe OA phenotype in the destabilization of the medial meniscus (DMM) induced OA mouse model, with upregulation of cartilage catabolic factors and downregulation of anabolic factors, consistent with our in vitro findings. Overexpression of Gprc5b by lentiviral vectors alleviated the cartilage degeneration in DMM-induced OA mouse model by inhibiting cartilage degradation and promoting regeneration. We also assessed the molecular mechanisms downstream of Gprc5b that may mediate these observed effects and identify the role of protein kinase B (AKT)-mammalian target of rapamycin (mTOR)-autophagy signaling pathway. Thus, we demonstrate an integral role of GPRC5B in OA pathogenesis, and activation of GPRC5B has the potential in preventing the progression of OA.
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- 2023
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5. YBX1-interacting small RNAs and RUNX2 can be blocked in primary bone cancer using CADD522
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Darrell Green, Archana Singh, Victoria L. Tippett, Luke Tattersall, Karan M. Shah, Chileleko Siachisumo, Nicole J. Ward, Paul Thomas, Simon Carter, Lee Jeys, Vaiyapuri Sumathi, Iain McNamara, David J. Elliott, Alison Gartland, Tamas Dalmay, and William D. Fraser
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miRNA ,tRF ,small RNA ,bone cancer ,CADD522 ,Diseases of the musculoskeletal system ,RC925-935 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Primary bone cancer (PBC) comprises several subtypes each underpinned by distinctive genetic drivers. This driver diversity produces novel morphological features and clinical behaviour that serendipitously makes PBC an excellent metastasis model. Here, we report that some transfer RNA-derived small RNAs termed tRNA fragments (tRFs) perform as a constitutive tumour suppressor mechanism by blunting a potential pro-metastatic protein-RNA interaction. This mechanism is reduced in PBC progression with a gradual loss of tRNAGlyTCC cleavage into 5′ end tRF-GlyTCC when comparing low-grade, intermediate-grade and high-grade patient tumours. We detected recurrent activation of miR-140 leading to upregulated RUNX2 expression in high-grade patient tumours. Both tRF-GlyTCC and RUNX2 share a sequence motif in their 3′ ends that matches the YBX1 recognition site known to stabilise pro-metastatic mRNAs. Investigating some aspects of this interaction network, gain- and loss-of-function experiments using small RNA mimics and antisense LNAs, respectively, showed that ectopic tRF-GlyTCC reduced RUNX2 expression and dispersed 3D micromass architecture in vitro. iCLIP sequencing revealed YBX1 physical binding to the 3′ UTR of RUNX2. The interaction between YBX1, tRF-GlyTCC and RUNX2 led to the development of the RUNX2 inhibitor CADD522 as a PBC treatment. CADD522 assessment in vitro revealed significant effects on PBC cell behaviour. In xenograft mouse models, CADD522 as a single agent without surgery significantly reduced tumour volume, increased overall and metastasis-free survival and reduced cancer-induced bone disease. Our results provide insight into PBC molecular abnormalities that have led to the identification of new targets and a new therapeutic.
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- 2023
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6. A molecular quantitative trait locus map for osteoarthritis
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Julia Steinberg, Lorraine Southam, Theodoros I. Roumeliotis, Matthew J. Clark, Raveen L. Jayasuriya, Diane Swift, Karan M. Shah, Natalie C. Butterfield, Roger A. Brooks, Andrew W. McCaskie, J. H. Duncan Bassett, Graham R. Williams, Jyoti S. Choudhary, J. Mark Wilkinson, and Eleftheria Zeggini
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Science - Abstract
Understanding the molecular effects of disease variants in relevant tissues is essential to understanding and treating disease. Here, the authors discover expression and protein quantitative trait loci in cartilage and synovium from 115 osteoarthritis patients to pinpoint genes of action and potential drug treatments.
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- 2021
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7. Strategies for Articular Cartilage Repair and Regeneration
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Yanxi Liu, Karan M. Shah, and Jian Luo
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articular cartilage ,chondrocyte ,microenvironment ,regenerative medicine ,articular cartilage repair ,osteoarthritis ,Biotechnology ,TP248.13-248.65 - Abstract
Articular cartilage is an avascular tissue, with limited ability to repair and self-renew. Defects in articular cartilage can induce debilitating degenerative joint diseases such as osteoarthritis. Currently, clinical treatments have limited ability to repair, for they often result in the formation of mechanically inferior cartilage. In this review, we discuss the factors that affect cartilage homeostasis and function, and describe the emerging regenerative approaches that are informing the future treatment options.
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- 2021
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8. The P2RX7B splice variant modulates osteosarcoma cell behaviour and metastatic properties
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Luke Tattersall, Karan M. Shah, Darren L. Lath, Archana Singh, Jennifer M. Down, Elena De Marchi, Alex Williamson, Francesco Di Virgilio, Dominique Heymann, Elena Adinolfi, William D. Fraser, Darrell Green, Michelle A. Lawson, and Alison Gartland
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ATP ,Bone cancer ,Osteosarcoma ,P2RX7B ,Purinergic signalling ,Diseases of the musculoskeletal system ,RC925-935 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Osteosarcoma (OS) is the most common type of primary bone cancer affecting children and adolescents. OS has a high propensity to spread meaning the disease is often incurable and fatal. There have been no improvements in survival rates for decades. This highlights an urgent need for the development of novel therapeutic strategies. Here, we report in vitro and in vivo data that demonstrates the role of purinergic signalling, specifically, the B isoform of the purinergic receptor P2RX7 (P2RX7B), in OS progression and metastasis. Methods: TE85 and MNNG-HOS OS cells were transfected with P2RX7B. These cell lines were then characterised and assessed for proliferation, cell adhesion, migration and invasion in vitro. We used these cells to perform both paratibial and tail vein injected mouse studies where the primary tumour, bone and lungs were analysed. We used RNA-seq to identify responsive pathways relating to P2RX7B. Results: Our data shows that P2RX7B expression confers a survival advantage in TE85 + P2RX7B and MNNG-HOS + P2RX7B human OS cell lines in vitro that is minimised following treatment with A740003, a specific P2RX7 antagonist. P2RX7B expression reduced cell adhesion and P2RX7B activation promoted invasion and migration in vitro, demonstrating a metastatic phenotype. Using an in vivo OS xenograft model, MNNG-HOS + P2RX7B tumours exhibited cancer-associated ectopic bone formation that was abrogated with A740003 treatment. A pro-metastatic phenotype was further demonstrated in vivo as expression of P2RX7B in primary tumour cells increased the propensity of tumour cells to metastasise to the lungs. RNA-seq identified a novel gene axis, FN1/LOX/PDGFB/IGFBP3/BMP4, downregulated in response to A740003 treatment. Conclusion: Our data illustrates a role for P2RX7B in OS tumour growth, progression and metastasis. We show that P2RX7B is a future therapeutic target in human OS.
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- 2021
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9. A Systematic Review of the Expression, Signalling and Function of P2 Receptors in Primary Bone Cancer
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Luke Tattersall, Dan C Gagui, Victoria L Tippett, Norain B Ab Latif, Karan M Shah, and Alison Gartland
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atp ,chondrosarcoma ,chordoma ,ewing's sarcoma ,osteosarcoma ,p2 receptors ,primary bone cancer ,purinergic signalling ,tumour microenvironment ,Biochemistry ,QD415-436 ,Biology (General) ,QH301-705.5 - Abstract
Primary bone cancers are rare malignant diseases with significant morbidity and mortality. The treatment regimen relies on a combination of surgery (often involving amputation), chemotherapy and radiotherapy with outcomes dependent on localization of the tumour, grade, size and response to chemotherapy. Both treatment options and survival statistics have remained constant over the past 40 years and alternative therapies need to be explored. Purinergic signalling involving the interaction of extracellular nucleotides with P2 receptors has been investigated in numerous cancers with activation or inhibition a topic of debate. To assess whether purinergic signalling could be a viable target in primary bone cancer a systematic review for relevant primary literature published in PubMed, MEDLINE and Web of Science was performed. Search terms were formulated around three separate distinct topics; expression of P2 receptors in primary bone cancer models, P2 receptor signalling pathways involved and the functional consequences of P2 receptor signalling. Searching identified 30 primary articles after screening and eligibility assessments. This review highlights the diverse expression, signalling pathways and functional roles associated with different P2 receptors in primary bone cancers and provides a systematic summary of which P2 receptors are exciting targets to treat primary bone cancer and its associated symptoms.
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- 2022
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10. Integrative epigenomics, transcriptomics and proteomics of patient chondrocytes reveal genes and pathways involved in osteoarthritis
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Julia Steinberg, Graham R. S. Ritchie, Theodoros I. Roumeliotis, Raveen L. Jayasuriya, Matthew J. Clark, Roger A. Brooks, Abbie L. A. Binch, Karan M. Shah, Rachael Coyle, Mercedes Pardo, Christine L. Le Maitre, Yolande F. M. Ramos, Rob G. H. H. Nelissen, Ingrid Meulenbelt, Andrew W. McCaskie, Jyoti S. Choudhary, J. Mark Wilkinson, and Eleftheria Zeggini
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Medicine ,Science - Abstract
Abstract Osteoarthritis (OA) is a common disease characterized by cartilage degeneration and joint remodeling. The underlying molecular changes underpinning disease progression are incompletely understood. We investigated genes and pathways that mark OA progression in isolated primary chondrocytes taken from paired intact versus degraded articular cartilage samples across 38 patients undergoing joint replacement surgery (discovery cohort: 12 knee OA, replication cohorts: 17 knee OA, 9 hip OA patients). We combined genome-wide DNA methylation, RNA sequencing, and quantitative proteomics data. We identified 49 genes differentially regulated between intact and degraded cartilage in at least two –omics levels, 16 of which have not previously been implicated in OA progression. Integrated pathway analysis implicated the involvement of extracellular matrix degradation, collagen catabolism and angiogenesis in disease progression. Using independent replication datasets, we showed that the direction of change is consistent for over 90% of differentially expressed genes and differentially methylated CpG probes. AQP1, COL1A1 and CLEC3B were significantly differentially regulated across all three –omics levels, confirming their differential expression in human disease. Through integration of genome-wide methylation, gene and protein expression data in human primary chondrocytes, we identified consistent molecular players in OA progression that replicated across independent datasets and that have translational potential.
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- 2017
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11. Linking chondrocyte and synovial transcriptional profile to clinical phenotype in osteoarthritis
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Eleftheria Zeggini, D Swift, Julia Steinberg, Roger A. Brooks, Raveen L Jayasuriya, Karan M. Shah, Andreas Fontalis, Jeremy Mark Wilkinson, Andrew McCaskie, Lorraine Southam, M.J. Clark, Steinberg, Julia [0000-0002-0585-2312], Wilkinson, Jeremy Mark [0000-0001-5577-3674], Zeggini, Eleftheria [0000-0003-4238-659X], and Apollo - University of Cambridge Repository
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Cartilage, Articular ,0301 basic medicine ,Pathology ,medicine.medical_specialty ,MMP1 ,Immunology ,Osteoarthritis ,General Biochemistry, Genetics and Molecular Biology ,Chondrocyte ,Extracellular matrix ,Chondrocytes ,Inflammation ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,medicine ,Extracellular ,Humans ,Immunology and Allergy ,Cell adhesion ,030203 arthritis & rheumatology ,business.industry ,Cartilage ,Synovial Membrane ,Blood Proteins ,Osteoarthritis, Knee ,medicine.disease ,Phenotype ,ddc ,3. Good health ,osteoarthritis ,030104 developmental biology ,medicine.anatomical_structure ,Cytokines ,Female ,business - Abstract
ObjectivesTo determine how gene expression profiles in osteoarthritis joint tissues relate to patient phenotypes and whether molecular subtypes can be reproducibly captured by a molecular classification algorithm.MethodsWe analysed RNA sequencing data from cartilage and synovium in 113 osteoarthritis patients, applying unsupervised clustering and Multi-Omics Factor Analysis to characterise transcriptional profiles. We tested the association of the molecularly defined patient subgroups with clinical characteristics from electronic health records.ResultsWe detected two patient subgroups in low-grade cartilage (showing no/minimal degeneration, cartilage normal/softening only), with differences associated with inflammation, extracellular matrix-related and cell adhesion pathways. The high-inflammation subgroup was associated with female sex (OR 4.12, p=0.0024) and prescription of proton pump inhibitors (OR 4.21, p=0.0040). We identified two independent patient subgroupings in osteoarthritis synovium: one related to inflammation and the other to extracellular matrix and cell adhesion processes. A seven-gene classifier including MMP13, APOD, MMP2, MMP1, CYTL1, IL6 and C15orf48 recapitulated the main axis of molecular heterogeneity in low-grade knee osteoarthritis cartilage (correlation ρ=−0.88, p−10) and was reproducible in an independent patient cohort (ρ=−0.85, p−10).ConclusionsThese data support the reproducible stratification of osteoarthritis patients by molecular subtype and the exploration of new avenues for tailored treatments.
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- 2021
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12. The strategy and clinical relevance of in vitro models of MAP resistance in osteosarcoma: a systematic review
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Victoria L, Tippett, Luke, Tattersall, Norain B, Ab Latif, Karan M, Shah, Michelle A, Lawson, and Alison, Gartland
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Over the last 40 years osteosarcoma (OS) survival has stagnated with patients commonly resistant to neoadjuvant MAP chemotherapy involving high dose methotrexate, adriamycin (doxorubicin) and platinum (cisplatin). Due to the rarity of OS, the generation of relevant cell models as tools for drug discovery is paramount to tackling this issue. Four literature databases were systematically searched using pre-determined search terms to identify MAP resistant OS cell lines and patients. Drug exposure strategies used to develop cell models of resistance and the impact of these on the differential expression of resistance associated genes, proteins and non-coding RNAs are reported. A comparison to clinical studies in relation to chemotherapy response, relapse and metastasis was then made. The search retrieved 1891 papers of which 52 were relevant. Commonly, cell lines were derived from Caucasian patients with epithelial or fibroblastic subtypes. The strategy for model development varied with most opting for continuous over pulsed chemotherapy exposure. A diverse resistance level was observed between models (2.2-338 fold) with 63% of models exceeding clinically reported resistance levels which may affect the expression of chemoresistance factors. In vitro p-glycoprotein overexpression is a key resistance mechanism; however, from the available literature to date this does not translate to innate resistance in patients. The selection of models with a lower fold resistance may better reflect the clinical situation. A comparison of standardised strategies in models and variants should be performed to determine their impact on resistance markers. Clinical studies are required to determine the impact of resistance markers identified in vitro in poor responders to MAP treatment, specifically with respect to innate and acquired resistance. A shift from seeking disputed and undruggable mechanisms to clinically relevant resistance mechanisms may identify key resistance markers that can be targeted for patient benefit after a 40-year wait.
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- 2022
13. JZL184, A Monoacylglycerol Lipase Inhibitor, Induces Bone Loss in a Multiple Myeloma Model of Immunocompetent Mice
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Boya Li, Silvia Marino, Karan M. Shah, Giovana Carrasco, Aymen I. Idris, Michelle A. Lawson, Darren Lath, and Antonia Sophocleous
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0301 basic medicine ,Cannabinoid receptor ,Osteolysis ,Endocrinology, Diabetes and Metabolism ,JZL184 ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Endocrinology ,Piperidines ,Osteoclast ,Multiple myeloma ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Orthopedics and Sports Medicine ,Benzodioxoles ,Bone Resorption ,Bone ,Cannabinoid ,Original Research ,Cancer ,Chemistry ,Osteoblast ,medicine.disease ,Monoacylglycerol Lipases ,Monoacylglycerol lipase ,030104 developmental biology ,medicine.anatomical_structure ,RAW 264.7 Cells ,030220 oncology & carcinogenesis ,Cancer research ,MAGL ,Osteosarcoma ,Bone marrow - Abstract
Multiple myeloma (MM) patients develop osteolysis characterised by excessive osteoclastic bone destruction and lack of osteoblast bone formation. Pharmacological manipulation of monoacylglycerol lipase (MAGL), an enzyme responsible for the degradation of the endocannabinoid 2-arachidonoyl glycerol (2-AG), reduced skeletal tumour burden and osteolysis associated with osteosarcoma and advanced breast and prostate cancers. MM and hematopoietic, immune and bone marrow cells express high levels of type 2 cannabinoid receptor and osteoblasts secrete 2-AG. However, the effects of MAGL manipulation on MM have not been investigated. Here, we report that treatment of pre-osteoclasts with non-cytotoxic concentrations of JZL184, a verified MAGL inhibitor, enhanced MM- and RANKL-induced osteoclast formation and size in vitro. Exposure of osteoblasts to JZL184 in the presence of MM cell-derived factors reduced osteoblast growth but had no effect on the ability of these cells to mature or form bone nodules. In vivo, administration of JZL184 induced a modest, yet significant, bone loss at both trabecular and cortical compartments of long bones of immunocompetent mice inoculated with the syngeneic 5TGM1-GFP MM cells. Notably, JZL184 failed to inhibit the in vitro growth of a panel of mouse and human MM cell lines, or reduce tumour burden in mice. Thus, MAGL inhibitors such as JZL184 can exacerbate MM-induced bone loss. Electronic supplementary material The online version of this article (10.1007/s00223-020-00689-0) contains supplementary material, which is available to authorised users.
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- 2020
14. P2RX7 inhibition reduces breast cancer induced osteolytic lesions - implications for bone metastasis
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Karan M. Shah, Luke Tattersall, Aleana Hussain, Sarah C. Macfarlane, Alexander Williamson, Adelina E. Acosta-Martin, Janine T. Erler, Penelope D. Ottewell, and Alison Gartland
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Breast cancer metastasis to bone is a major contributor to morbidity and mortality in patients and remains an unmet clinical need. Purinergic signalling via the P2X7 receptor (P2RX7) in the primary tumour microenvironment is associated with progression of several cancers. It has also now become evident that intra-tumoural hypoxia facilitates cancer metastasis and reduces patient survival. In this study, we present data suggesting that hypoxia regulates the expression of P2RX7 in the primary tumour microenvironment; and importantly, inhibition with a selective antagonist (10mg/kg A740003) increased cancer cell death via apoptosis in a E0771/C57BL-6J syngeneic murine model. Furthermore, micro-computed tomography demonstrated reduced number of osteolytic lesions and lesion area following P2RX7 inhibition in absence of overt metastases by decreasing osteoclast numbers. We also demonstrate that activation of P2RX7 plays a role in the secretion of extracellular vesicles (EVs) from breast cancer cells. Mass-spectrometric analyses showed a distinct protein signature for EVs derived from hypoxic compared with normoxic cancer cells which elicit specific responses in bone cells that are associated with pre-metastatic niche formation. Thus, inhibiting P2RX7 provides a novel opportunity to preferentially target the hypoxic breast cancer cells preventing tumour progression and subsequent metastasis to bone
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- 2022
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15. The P2RX7B splice variant modulates osteosarcoma cell behaviour and metastatic properties
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Karan M. Shah, Elena Adinolfi, Elena De Marchi, Archana Singh, Luke Tattersall, Alex Williamson, Jennifer M. Down, William D. Fraser, Alison Gartland, Francesco Di Virgilio, Michelle A. Lawson, Dominique Heymann, Darren Lath, Darrell Green, University of Sheffield [Sheffield], University of East Anglia [Norwich] (UEA), Università degli Studi di Ferrara = University of Ferrara (UniFE), Institut de Cancérologie de l'Ouest [Angers/Nantes] (UNICANCER/ICO), UNICANCER, Norwich University, and Heymann, Dominique
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FDR : False Discovery Rate ,Diseases of the musculoskeletal system ,EMT : Epithelial–mesenchymal transition ,[SDV.BC.IC] Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB] ,Metastasis ,OS : Osteosarcoma ,PE : Paired End ,ATP : Adenosine Triphosphate ,Purinergic signalling ,BzATP : Benzoyl ATP ,[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB] ,Bone cancer ,RC254-282 ,[SDV.MHEP.EM] Life Sciences [q-bio]/Human health and pathology/Endocrinology and metabolism ,Osteosarcoma ,[SDV.MHEP.RSOA] Life Sciences [q-bio]/Human health and pathology/Rhumatology and musculoskeletal system ,PDGFB ,Purinergic receptor ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Transfection ,[SDV.MHEP.EM]Life Sciences [q-bio]/Human health and pathology/Endocrinology and metabolism ,DE : Differentially Expressed ,Oncology ,ECM : Extracellular Matrix ,[SDV.MHEP.RSOA]Life Sciences [q-bio]/Human health and pathology/Rhumatology and musculoskeletal system ,[SDV.MHEP.AHA] Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,Biology ,LOX : Lysyl Oxidase ,[SDV.MHEP.PED] Life Sciences [q-bio]/Human health and pathology/Pediatrics ,[SDV.CAN] Life Sciences [q-bio]/Cancer ,In vivo ,medicine ,HBSS : Hanks Balanced Salt Solution ,[SDV.MHEP.AHA]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,MMPs : Matrix Metalloproteinases ,Cell adhesion ,P2RX7B ,[SDV.MHEP.PED]Life Sciences [q-bio]/Human health and pathology/Pediatrics ,business.industry ,Ambientale ,Cancer ,P2RX7 ,medicine.disease ,ATP ,qRT-PCR : Quantitative Reverse Transcription Polymerase Chain Reaction ,RC925-935 ,Cancer research ,business - Abstract
Osteosarcoma (OS) is the most common type of primary bone cancer affecting children and adolescents. OS has a high propensity to spread, meaning the disease is often incurable and fatal. There have been no improvements in survival rates for decades. This highlights an urgent need for development of novel therapeutic strategies. In this study, we have produced in vitro and in vivo data that demonstrates the role of purinergic signalling, specifically, the B isoform of the purinergic receptor P2RX7 (herein termed “ P2RX7B”), in OS progression and metastasis. Our data shows that P2RX7B expression confers a survival advantage in TE85+P2RX7B and MNNG-HOS+ P2RX7B human OS cell lines in vitro that is minimised following treatment with A740003, a specific P2RX7 antagonist. P2RX7B expression reduced cell adhesion and P2RX7B activation promoted invasion and migration in vitro, suggesting a probable metastatic phenotype. Using an in vivo OS xenograft model, MNNG-HOS+P2RX7B tumours exhibited ectopic bone formation that was abrogated with A740003 treatment. An increased metastatic phenotype was further demonstrated in vivo as expression of P2RX7B in primary tumour cells increased the propensity of the tumour to metastasise to the lungs. RNA-seq identified a novel gene axis, FN1/LOX/PDGFB/IGFBP3/BMP4, downregulated in response to A740003 treatment. In conclusion, our data indicates for the first time a role for P2RX7B in OS tumour growth, progression and metastasis. We show that P2RX7B is a potential therapeutic target in human OS.Novelty and ImpactWe provide evidence for the pro-tumorigenic role of the B isoform of the P2RX7 purinergic receptor in osteosarcoma (OS). In addition to increasing proliferation, P2RX7B increases the cancerous properties of OS cells, reducing adhesion and increasing migration and invasion. In vivo, P2RX7B does not affect primary tumour growth, but does lead to an increased propensity to metastasize. RNA-seq revealed a new axis of oncogenic genes inhibited by the P2RX7 antagonist and this data could potentially lead to new targets for OS treatment.
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- 2021
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16. Distinct Concentration-Dependent Molecular Pathways Regulate Bone Cell Responses to Cobalt and Chromium Exposure from Joint Replacement Prostheses
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Karan M. Shah, J. Mark Wilkinson, Mark J Dunning, and Alison Gartland
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musculoskeletal diseases ,Microarray ,QH301-705.5 ,Metal Nanoparticles ,Article ,Catalysis ,Inorganic Chemistry ,Extracellular matrix ,Focal adhesion ,prosthesis surface ,Osteoclast ,Gene expression ,Bone cell ,medicine ,Humans ,hip replacement ,Arthroplasty, Replacement ,Bone Resorption ,Physical and Theoretical Chemistry ,Biology (General) ,Molecular Biology ,QD1-999 ,Cells, Cultured ,Spectroscopy ,Oligonucleotide Array Sequence Analysis ,Chemistry ,Organic Chemistry ,osteoblasts ,Osteoblast ,General Medicine ,Gene signature ,cobalt ,Computer Science Applications ,Cell biology ,medicine.anatomical_structure ,osteoclasts ,Gene Expression Regulation ,Metal-on-Metal Joint Prostheses ,gene expression ,chromium ,microarray - Abstract
Systemic cobalt (Co) and chromium (Cr) concentrations may be elevated in patients with metal joint replacement prostheses. Several studies have highlighted the detrimental effects of this exposure on bone cells in vitro, but the underlying mechanisms remain unclear. In this study, we use whole-genome microarrays to comprehensively assess gene expression in primary human osteoblasts, osteoclast precursors and mature resorbing osteoclasts following exposure to clinically relevant circulating versus local periprosthetic tissue concentrations of Co2+ and Cr3+ ions and CoCr nanoparticles. We also describe the gene expression response in osteoblasts on routinely used prosthesis surfaces in the presence of metal exposure. Our results suggest that systemic levels of metal exposure have no effect on osteoblasts, and primarily inhibit osteoclast differentiation and function via altering the focal adhesion and extracellular matrix interaction pathways. In contrast, periprosthetic levels of metal exposure inhibit both osteoblast and osteoclast activity by altering HIF-1α signaling and endocytic/cytoskeletal genes respectively, as well as increasing inflammatory signaling with mechanistic implications for adverse reactions to metal debris. Furthermore, we identify gene clusters and KEGG pathways for which the expression correlates with increasing Co2+:Cr3+ concentrations, and has the potential to serve as early markers of metal toxicity. Finally, our study provides a molecular basis for the improved clinical outcomes for hydroxyapatite-coated prostheses that elicit a pro-survival osteogenic gene signature compared to grit-blasted and plasma-sprayed titanium-coated surfaces in the presence of metal exposure.
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- 2021
17. A molecular quantitative trait locus map for osteoarthritis
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Raveen L Jayasuriya, D Swift, Karan M. Shah, Jyoti S. Choudhary, Lorraine Southam, Graham R. Williams, Eleftheria Zeggini, Andrew McCaskie, Theodoros I. Roumeliotis, Julia Steinberg, J. H. Duncan Bassett, Roger A. Brooks, M.J. Clark, J. Mark Wilkinson, Natalie C. Butterfield, Steinberg, Julia [0000-0002-0585-2312], Clark, Matthew J [0000-0003-2152-2257], Shah, Karan M [0000-0001-9909-6409], Butterfield, Natalie C [0000-0002-5209-7508], Bassett, JH Duncan [0000-0003-0817-0082], Williams, Graham R [0000-0002-8555-8219], Choudhary, Jyoti S [0000-0003-0881-5477], Wilkinson, J Mark [0000-0001-5577-3674], Zeggini, Eleftheria [0000-0003-4238-659X], Apollo - University of Cambridge Repository, Clark, Matthew J. [0000-0003-2152-2257], Shah, Karan M. [0000-0001-9909-6409], Butterfield, Natalie C. [0000-0002-5209-7508], Bassett, J. H. Duncan [0000-0003-0817-0082], Williams, Graham R. [0000-0002-8555-8219], Choudhary, Jyoti S. [0000-0003-0881-5477], and Wilkinson, J. Mark [0000-0001-5577-3674]
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0301 basic medicine ,Article ,Gene expression profiling ,Gene regulation ,Genome-wide association studies ,Transcriptomics ,Science ,Quantitative Trait Loci ,631/208/205/2138 ,General Physics and Astronomy ,Genome-wide association study ,Computational biology ,Osteoarthritis ,Disease ,Biology ,Quantitative trait locus ,Proteomics ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,0302 clinical medicine ,631/208/200 ,medicine ,Humans ,Genetic Predisposition to Disease ,Repurposing ,45/91 ,030203 arthritis & rheumatology ,Science & Technology ,Multidisciplinary ,45 ,631/208/212/2019 ,Gene Expression Profiling ,General Chemistry ,Omics ,medicine.disease ,ddc ,3. Good health ,Multidisciplinary Sciences ,030104 developmental biology ,Phenotype ,Drug development ,Gene Expression Regulation ,Science & Technology - Other Topics ,631/208/191/2018 ,Transcriptome ,Genome-Wide Association Study ,Transcription Factors - Abstract
Osteoarthritis causes pain and functional disability for over 500 million people worldwide. To develop disease-stratifying tools and modifying therapies, we need a better understanding of the molecular basis of the disease in relevant tissue and cell types. Here, we study primary cartilage and synovium from 115 patients with osteoarthritis to construct a deep molecular signature map of the disease. By integrating genetics with transcriptomics and proteomics, we discover molecular trait loci in each tissue type and omics level, identify likely effector genes for osteoarthritis-associated genetic signals and highlight high-value targets for drug development and repurposing. These findings provide insights into disease aetiopathology, and offer translational opportunities in response to the global clinical challenge of osteoarthritis., Understanding the molecular effects of disease variants in relevant tissues is essential to understanding and treating disease. Here, the authors discover expression and protein quantitative trait loci in cartilage and synovium from 115 osteoarthritis patients to pinpoint genes of action and potential drug treatments.
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- 2021
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18. A Systematic Review of the Expression, Signalling and Function of P2 Receptors in Primary Bone Cancer
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Alison Gartland, Karan M Shah, Norain B Ab Latif, Victoria L Tippett, Dan C Gagui, and Luke Tattersall
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General Immunology and Microbiology ,General Biochemistry, Genetics and Molecular Biology - Published
- 2022
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19. Decoding the genomic basis of osteoarthritis
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M.J. Clark, Jyoti S. Choudhary, Roger A. Brooks, Katherine F. Curry, Raveen L Jayasuriya, Lorraine Southam, Andrew McCaskie, D Swift, J. Mark Wilkinson, Karan M. Shah, J. H. Duncan Bassett, Andreas Fontalis, Natalie C. Butterfield, Julia Steinberg, Christopher J. Lelliott, Graham R. Williams, Theodoros I. Roumeliotis, and Eleftheria Zeggini
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030203 arthritis & rheumatology ,0303 health sciences ,business.industry ,Disease ,Osteoarthritis ,Quantitative trait locus ,Bioinformatics ,Omics ,medicine.disease ,Tailored Intervention ,3. Good health ,03 medical and health sciences ,Drug repositioning ,0302 clinical medicine ,Consensus clustering ,Medicine ,business ,Gene ,030304 developmental biology - Abstract
Osteoarthritis is a serious joint disease that causes pain and functional disability for a quarter of a billion people worldwide1, with no disease-stratifying tools nor modifying therapy. Here, we use primary chondrocytes, synoviocytes and peripheral blood from patients with osteoarthritis to construct a molecular quantitative trait locus map of gene expression and protein abundance in disease. By integrating data across omics levels, we identify likely effector genes for osteoarthritis-associated genetic signals. We detect stark molecular differences between macroscopically intact (low-grade) and highly degenerated (high-grade) cartilage, reflecting activation of the extracellular matrix-receptor interaction pathway. Using unsupervised consensus clustering on transcriptome-wide sequencing, we identify molecularly-defined patient subgroups that correlate with clinical characteristics. Between-cluster differences are driven by inflammation, presenting the opportunity to stratify patients on the basis of their molecular profile for tailored intervention. We construct and validate a 7-gene classifier that reproducibly distinguishes between these disease subtypes. Finally, we identify potentially actionable compounds for disease modification and drug repositioning. Our findings contribute to both patient stratification and therapy development in this globally important area of unmet need.
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- 2019
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20. The 2018 Otto Aufranc Award: How does genome-wide variation affect osteolysis risk after THA?
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Karan M. Shah, Kalliope Panoutsopoulou, Hårvard Dale, Lorraine Southam, Geir Hallan, Konstantinos Hatzikotoulas, Jeremy Mark Wilkinson, Ioanna Tachmazidou, Ove Furnes, Anne Marie Fenstad, Scott Macinnes, and Eleftheria Zeggini
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Male ,Reoperation ,medicine.medical_specialty ,Osteolysis ,Time Factors ,medicine.medical_treatment ,Arthroplasty, Replacement, Hip ,Awards and Prizes ,Other Features ,Disease ,Quantitative trait locus ,Prosthesis Design ,Time-to-Treatment ,03 medical and health sciences ,Chromosome 15 ,0302 clinical medicine ,Risk Factors ,Internal medicine ,medicine ,Humans ,Orthopedics and Sports Medicine ,Clinical significance ,Genetic Predisposition to Disease ,030212 general & internal medicine ,Registries ,Genetic association ,Aged ,030222 orthopedics ,business.industry ,Norway ,General Medicine ,Middle Aged ,medicine.disease ,2018 Hip Society Proceedings ,Arthroplasty ,United Kingdom ,Prosthesis Failure ,Treatment Outcome ,Genetic Loci ,Case-Control Studies ,Cohort ,Surgery ,Female ,Hip Joint ,Hip Prosthesis ,business ,Genome-Wide Association Study - Abstract
BACKGROUND: Periprosthetic osteolysis resulting in aseptic loosening is a leading cause of THA revision. Individuals vary in their susceptibility to osteolysis and heritable factors may contribute to this variation. However, the overall contribution that such variation makes to osteolysis risk is unknown. QUESTIONS/PURPOSES: We conducted two genome-wide association studies to (1) identify genetic risk loci associated with susceptibility to osteolysis; and (2) identify genetic risk loci associated with time to prosthesis revision for osteolysis. METHODS: The Norway cohort comprised 2624 patients after THA recruited from the Norwegian Arthroplasty Registry, of whom 779 had undergone revision surgery for osteolysis. The UK cohort included 890 patients previously recruited from hospitals in the north of England, 317 who either had radiographic evidence of and/or had undergone revision surgery for osteolysis. All participants had received a fully cemented or hybrid THA using a small-diameter metal or ceramic-on-conventional polyethylene bearing. Osteolysis susceptibility case-control analyses and quantitative trait analyses for time to prosthesis revision (a proxy measure of the speed of osteolysis onset) in those patients with osteolysis were undertaken in each cohort separately after genome-wide genotyping. Finally, a meta-analysis of the two independent cohort association analysis results was undertaken. RESULTS: Genome-wide association analysis identified four independent suggestive genetic signals for osteolysis case-control status in the Norwegian cohort and 11 in the UK cohort (p ≤ 5 x 10(-6)). After meta-analysis, five independent genetic signals showed a suggestive association with osteolysis case-control status at p ≤ 5 x 10(-6) with the strongest comprising 18 correlated variants on chromosome 7 (lead signal rs850092, p = 1.13 x 10(-6)). Genome-wide quantitative trait analysis in cases only showed a total of five and nine independent genetic signals for time to revision at p ≤ 5 x 10(-6), respectively. After meta-analysis, 11 independent genetic signals showed suggestive evidence of an association with time to revision at p ≤ 5 x 10(-6) with the largest association block comprising 174 correlated variants in chromosome 15 (lead signal rs10507055, p = 1.40 x 10(-7)). CONCLUSIONS: We explored the heritable biology of osteolysis at the whole genome level and identify several genetic loci that associate with susceptibility to osteolysis or with premature revision surgery. However, further studies are required to determine a causal association between the identified signals and osteolysis and their functional role in the disease. CLINICAL RELEVANCE: The identification of novel genetic risk loci for osteolysis enables new investigative avenues for clinical biomarker discovery and therapeutic intervention in this disease.
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- 2019
21. Genome-wide association study of developmental dysplasia of the hip identifies an association with
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Konstantinos, Hatzikotoulas, Andreas, Roposch, Karan M, Shah, Matthew J, Clark, Selina, Bratherton, Vasanti, Limbani, Julia, Steinberg, Eleni, Zengini, Kaltuun, Warsame, Madhushika, Ratnayake, Maria, Tselepi, Jeremy, Schwartzentruber, John, Loughlin, Deborah M, Eastwood, Eleftheria, Zeggini, and Manoj, Ramachandran
- Abstract
Developmental dysplasia of the hip (DDH) is the most common skeletal developmental disease. However, its genetic architecture is poorly understood. We conduct the largest DDH genome-wide association study to date and replicate our findings in independent cohorts. We find the heritable component of DDH attributable to common genetic variants to be 55% and distributed equally across the autosomal and X-chromosomes. We identify replicating evidence for association between
- Published
- 2017
22. Integrative epigenomics, transcriptomics and proteomics of patient chondrocytes reveal genes and pathways involved in osteoarthritis
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Raveen L Jayasuriya, Christine L. Le Maitre, Abbie L. A. Binch, Rachael Coyle, Mercedes Pardo, Yolande F. M. Ramos, Eleftheria Zeggini, Andrew McCaskie, M.J. Clark, Theodoros I. Roumeliotis, Ingrid Meulenbelt, Julia Steinberg, Jyoti S. Choudhary, Karan M. Shah, Rob G H H Nelissen, Graham R. S. Ritchie, Roger A. Brooks, J. Mark Wilkinson, Pardo, Mercedes [0000-0002-3477-9695], Ramos, Yolande FM [0000-0003-1459-413X], Wilkinson, J Mark [0000-0001-5577-3674], Zeggini, Eleftheria [0000-0003-4238-659X], and Apollo - University of Cambridge Repository
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Epigenomics ,Male ,Proteomics ,0301 basic medicine ,Arthroplasty, Replacement, Hip ,Science ,Quantitative proteomics ,Osteoarthritis ,Biology ,Bioinformatics ,Article ,Collagen Type I ,Mass Spectrometry ,Osteoarthritis, Hip ,Epigenesis, Genetic ,Transcriptome ,03 medical and health sciences ,Chondrocytes ,medicine ,Humans ,Gene Regulatory Networks ,Lectins, C-Type ,Arthroplasty, Replacement, Knee ,Multidisciplinary ,Aquaporin 1 ,Sequence Analysis, RNA ,Gene Expression Profiling ,Cartilage ,DNA Methylation ,Osteoarthritis, Knee ,medicine.disease ,3. Good health ,Collagen Type I, alpha 1 Chain ,Gene expression profiling ,030104 developmental biology ,medicine.anatomical_structure ,Case-Control Studies ,DNA methylation ,Disease Progression ,Cancer research ,Medicine ,Chromatography, Liquid - Abstract
Osteoarthritis (OA) is a common disease characterized by cartilage degeneration and joint remodeling. The underlying molecular changes underpinning disease progression are incompletely understood. We investigated genes and pathways that mark OA progression in isolated primary chondrocytes taken from paired intact versus degraded articular cartilage samples across 38 patients undergoing joint replacement surgery (discovery cohort: 12 knee OA, replication cohorts: 17 knee OA, 9 hip OA patients). We combined genome-wide DNA methylation, RNA sequencing, and quantitative proteomics data. We identified 49 genes differentially regulated between intact and degraded cartilage in at least two –omics levels, 16 of which have not previously been implicated in OA progression. Integrated pathway analysis implicated the involvement of extracellular matrix degradation, collagen catabolism and angiogenesis in disease progression. Using independent replication datasets, we showed that the direction of change is consistent for over 90% of differentially expressed genes and differentially methylated CpG probes. AQP1, COL1A1 and CLEC3B were significantly differentially regulated across all three –omics levels, confirming their differential expression in human disease. Through integration of genome-wide methylation, gene and protein expression data in human primary chondrocytes, we identified consistent molecular players in OA progression that replicated across independent datasets and that have translational potential.
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- 2017
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23. The Genetic Epidemiology of Developmental Dysplasia of the Hip: A Genome-Wide Association Study Harnessing National Clinical Audit Data
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Selina Bratherton, Jeremy Mark Wilkinson, Eleftheria Zeggini, Julia Steinberg, Eleni Zengini, M. Tselepi, Andreas Roposch, Madhushika Ratnayake, M.J. Clark, Vasanti Limbani, Kaltuun Warsame, Konstantinos Hatzikotoulas, Jeremy Schwartzentruber, Karan M. Shah, John Loughlin, Deborah M. Eastwood, and Wilkinson Jm
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030203 arthritis & rheumatology ,Genetics ,Clinical audit ,0303 health sciences ,Developmental dysplasia ,Small sample ,Genome-wide association study ,Biology ,Genetic architecture ,3. Good health ,03 medical and health sciences ,0302 clinical medicine ,Genetic epidemiology ,Gene ,030304 developmental biology - Abstract
Background: Developmental dysplasia of the hip (DDH) is a common, heritable condition characterised by abnormal formation of the hip joint, but has a poorly understood genetic architecture due to small sample sizes. We apply a novel case-ascertainment approach using national clinical audit (NCA) data to conduct the largest DDH genome-wide association study (GWAS) to date, and replicate our findings in independent cohorts. Methods: We used the English National Joint Registry (NJR) dataset to collect DNA and conducted a GWAS in 770 DDH cases and 3364 controls. We tested the variant most strongly associated with DDH in independent replication cohorts comprising 1129 patients and 4652 controls. Results: The heritable component of DDH attributable to common variants was 55% and distributed similarly across autosomal and the X-chromosomes. Variation within the GDF5 gene promoter was strongly and reproducibly associated with DDH (rs143384, OR 1.44 [95% CI 1.34-1.56], p=3.55x1022). Two further replicating loci showed suggestive association with DDH near NFIB (rs4740554, OR 1.30 [95% CI 1.16-1.45], p=4.44x10-6) and LOXL4 (rs4919218, 1.19 [1.10-1.28] p=4.38x10-6). Through gene-based enrichment we identify GDF5, UQCC1, MMP24, RETSAT and PDRG1 association with DDH (p
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- 2017
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24. MOLECULAR PHENOTYPING OF PATIENT CHONDROCYTES REVEALS GENES AND PATHWAYS INVOLVED IN OSTEOARTHRITIS
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Rachael Coyle, Jyoti S. Choudhary, M Wilkinson, Roger A. Brooks, Mercedes Pardo, Julia Steinberg, Abbie L. A. Binch, Theodoros I. Roumeliotis, Rob G H H Nelissen, Ingrid Meulenbelt, Eleftheria Zeggini, Andrew McCaskie, C. L. Le Maitre, Raveen L Jayasuriya, Yolande F M Ramos, Karan M. Shah, and Graham R. S. Ritchie
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Rheumatology ,Biomedical Engineering ,medicine ,Orthopedics and Sports Medicine ,Osteoarthritis ,Biology ,medicine.disease ,Bioinformatics ,Gene - Published
- 2017
25. Erratum to: The 2018 Otto Aufranc Award: How Does Genome-wide Variation Affect Osteolysis Risk After THA?
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J. Mark Wilkinson, Hårvard Dale, Karan M. Shah, Lorraine Southam, Geir Hallan, Konstantinos Hatzikotoulas, Anne Marie Fenstad, Kalliope Panoutsopoulou, Scott Macinnes, Ioanna Tachmazidou, Ove Furnes, and Eleftheria Zeggini
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Osteolysis ,Variation (linguistics) ,business.industry ,Evolutionary biology ,Medicine ,Orthopedics and Sports Medicine ,Surgery ,General Medicine ,business ,medicine.disease ,Affect (psychology) ,Genome - Published
- 2019
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26. A study on the use of metasurface synthesis using electric and magnetic susceptibility
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Kenneth Lee Ford and Karan M. Shah
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Surface (mathematics) ,Physics ,Ideal (set theory) ,Condensed matter physics ,business.industry ,Scattering ,Metamaterial ,020206 networking & telecommunications ,02 engineering and technology ,01 natural sciences ,Magnetic susceptibility ,Optics ,Surface wave ,0103 physical sciences ,0202 electrical engineering, electronic engineering, information engineering ,Oblique incidence ,010306 general physics ,business ,Practical implications - Abstract
This paper presents various case studies for meta surface design for plane-wave to plane-wave scattering using electric and magnetic susceptibilities. The case studies look at the practical implications and potential simplifications to ideal meta surface proprieties and how these impact on the scattering patterns of such structures. Specifically we address normal and oblique incidence scattering as well as scattering multiple plane-waves from a surface.
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- 2016
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27. Effects of chronic cobalt and chromium exposure after metal-on-metal hip resurfacing: An epigenome-wide association pilot study
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Julia, Steinberg, Karan M, Shah, Alison, Gartland, Eleftheria, Zeggini, and Jeremy Mark, Wilkinson
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Chromium ,Epigenomics ,Male ,Hip ,DNA methylation ,Pilot Projects ,Cobalt ,Middle Aged ,Case-Control Studies ,Humans ,Female ,Hip Prosthesis ,metal‐on‐metal prostheses ,Research Articles ,Aged ,Research Article - Abstract
Metal‐on‐metal (MOM) hip resurfacing has recently been a popular prosthesis choice for the treatment of symptomatic arthritis, but results in the release of cobalt and chromium ions into the circulation that can be associated with adverse clinical effects. The mechanism underlying these effects remains unclear. While chromosomal aneuploidy and translocations are associated with this exposure, the presence of subtle structural epigenetic modifications in patients with MOM joint replacements remains unexplored. Consequently, we analyzed whole blood DNA methylation in 34 OA patients with MOM hip resurfacing (MOM HR) compared to 34 OA patients with non‐MOM total hip replacements (non‐MOM THR), using the genome‐wide Illumina HumanMethylation 450k BeadChip. No probes showed differential methylation significant at 5% false‐discovery rate (FDR). We also tested association of probe methylation levels with blood chromium and cobalt levels directly; there were no significant associations at 5% FDR. Finally, we used the “epigenetic clock” to compare estimated to actual age at sample for all individuals. We found no significant difference between MOM HR and non‐MOM THR, and no correlation of age acceleration with blood metal levels. Our results suggest the absence of large methylation differences systemically following metal exposure, however, larger sample sizes will be required to identify potential small effects. Any DNA methylation changes that may occur in the local periprosthetic tissues remain to be elucidated. © 2017 The Authors. Orthopaedic Research Society. Published by Wiley Periodicals, Inc. on behalf of Orthopaedic Research Society. J Orthop Res 35:2323–2328, 2017.
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- 2016
28. Osteocyte isolation and culture methods
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Astrid D. Bakker, Matt M Stern, Janak L. Pathak, Nathalie Bravenboer, Amber Rath Stern, Karan M. Shah, ACTA, Orale Celbiologie (ORM, ACTA), Academic Centre for Dentistry in Amsterdam, Oral Cell Biology, Clinical chemistry, and MOVE Research Institute
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0301 basic medicine ,Cell type ,Cell signaling ,Osteoblast ,Enteroendocrine cell ,Anatomy ,Biology ,Article ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,medicine.anatomical_structure ,Cell culture ,Osteoclast ,Osteocyte ,Bone cell ,medicine ,General Earth and Planetary Sciences ,General Environmental Science - Abstract
The aim of this paper is to present several popular methods for in vitro culture of osteocytes and osteocyte cell lines. Osteocytes are located extremely suitably within the calcified bone matrix to sense mechanical signals, and are equipped with a multitude of molecular features that allow mechanosensing. However, osteocytes are more than specialized mechanosensing cells. Several signaling molecules are preferentially produced by osteocytes, and osteocytes hold a tight reign over osteoblast and osteoclast formation and activity, but also have a role as endocrine cell, communicating with muscles or organs as remote as the kidneys. In order to facilitate further research into this fascinating cell type, three protocols will be provided in this paper. The first protocol will be on the culture of mouse (early) osteocyte cell lines, the second on the isolation and culture of primary mouse bone cells, and the third on the culture of fully embedded human osteocytes within their own three-dimensional bone matrix.
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- 2016
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29. Osteocyte physiology and response to fluid shear stress are impaired following exposure to cobalt and chromium: Implications for bone health following joint replacement
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Karan M, Shah, Peter, Orton, Nick, Mani, Jeremy Mark, Wilkinson, and Alison, Gartland
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Chromium ,Joint Prosthesis ,Gene Expression ,osseointegration ,metal ions ,Cobalt ,Dendrites ,Osteocytes ,Cell Line ,Mice ,Calcification, Physiologic ,Animals ,Calcium ,mechanical stimuli ,Shear Strength ,Bone ,Research Articles ,bone remodeling ,Research Article - Abstract
The effects of metal ion exposure on osteocytes, the most abundant cell type in bone and responsible for coordinating bone remodeling, remain unclear. However, several studies have previously shown that exposure to cobalt (Co2+) and chromium (Cr3+), at concentrations equivalent to those found clinically, affect osteoblast and osteoclast survival and function. In this study, we tested the hypothesis that metal ions would similarly impair the normal physiology of osteocytes. The survival, dendritic morphology, and response to fluid shear stress of the mature osteocyte‐like cell‐line MLO‐Y4 following exposure to clinically relevant concentrations and combinations of Co and Cr ions were measured in 2D‐culture. Exposure of MLO‐Y4 cells to metal ions reduced cell number, increased dendrites per cell and increased dendrite length. We found that combinations of metal ions had a greater effect than the individual ions alone, and that Co2+ had a predominate effect on changes to cell numbers and dendrites. Combined metal ion exposure blunted the responses of the MLO‐Y4 cells to fluid shear stress, including reducing the intracellular calcium responses and modulation of genes for the osteocyte markers Cx43 and Gp38, and the signaling molecules RANKL and Dkk‐1. Finally, we demonstrated that in the late osteoblasts/early osteocytes cell line MLO‐A5 that Co2+ exposure had no effect on mineralization, but Cr3+ treatment inhibited mineralization in a dose‐dependent manner, without affecting cell viability. Taken together, these data indicate that metal exposure can directly affect osteocyte physiology, with potential implications for bone health including osseointegration of cementless components, and periprosthetic bone remodeling. © 2016 The Authors. Journal of Orthopaedic Research Published by Wiley Periodicals, Inc. on behalf of Orthopaedic Research Society. J Orthop Res 35:1716–1723, 2017.
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- 2016
30. Integrative epigenomics, transcriptomics and proteomics of patient chondrocytes reveal genes and pathways involved in osteoarthritis
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Julia Steinberg, Graham R. S. Ritchie, Theodoros I. Roumeliotis, Raveen L. Jayasuriya, Roger A. Brooks, Abbie L. A. Binch, Karan M. Shah, Rachael Coyle, Mercedes Pardo, Christine L. Le Maitre, Yolande F. M. Ramos, Rob G. H. H. Nelissen, Ingrid Meulenbelt, Andrew W. McCaskie, Jyoti S. Choudhary, J. Mark Wilkinson, and Eleftheria Zeggini
- Subjects
030203 arthritis & rheumatology ,0303 health sciences ,Systems biology ,In silico ,Quantitative proteomics ,Disease progression ,Osteoarthritis ,Computational biology ,Biology ,medicine.disease ,3. Good health ,03 medical and health sciences ,Joint disease ,0302 clinical medicine ,medicine ,Functional genomics ,Gene ,030304 developmental biology - Abstract
BackgroundOsteoarthritis (OA) is a common disease characterized by cartilage degeneration and joint remodeling. The underlying molecular changes underpinning disease progression are incompletely understood, but can be characterized using recent advances in genomics technologies, as the relevant tissue is readily accessible at joint replacement surgery. Here we investigate genes and pathways that mark OA progression, combining genome-wide DNA methylation, RNA sequencing and quantitative proteomics in isolated primary chondrocytes from matched intact and degraded articular cartilage samples across twelve patients with OA undergoing knee replacement surgery.ResultsWe identify 49 genes differentially regulated between intact and degraded cartilage at multiple omics levels, 16 of which have not previously been implicated in OA progression. Using independent replication datasets, we replicate statistically significant signals and show that the direction of change is consistent for over 90% of differentially expressed genes and differentially methylated CpG probes. Three genes are differentially regulated across all 3 omics levels: AQP1, COL1A1 and CLEC3B, and all three have evidence implicating them in OA through animal or cellular model studies. Integrated pathway analysis implicates the involvement of extracellular matrix degradation, collagen catabolism and angiogenesis in disease progression. All data from these experiments are freely available as a resource for the scientific community.ConclusionsThis work provides a first integrated view of the molecular landscape of human primary chondrocytes and identifies key molecular players in OA progression that replicate across independent datasets, with evidence for translational potential.
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- 2016
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31. Cobalt and chromium exposure affects osteoblast function and impairs the mineralization of prosthesis surfaces in vitro
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Alison Gartland, Jeremy Mark Wilkinson, and Karan M. Shah
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Chromium ,Osteoblasts ,Metal ions in aqueous solution ,chemistry.chemical_element ,Osteoblast ,Cobalt ,Mineralization (biology) ,In vitro ,Trace Elements ,medicine.anatomical_structure ,Calcification, Physiologic ,chemistry ,In vivo ,Cell Line, Tumor ,medicine ,Metal-on-Metal Joint Prostheses ,Alkaline phosphatase ,Humans ,Nanoparticles ,Orthopedics and Sports Medicine ,Drug Interactions ,Nuclear chemistry - Abstract
Cobalt (Co) and chromium (Cr) ions and nanoparticles equivalent to those released through tribo-corrosion of prosthetic metal-on-metal (MOM) bearings and taper junctions are detrimental to osteoblast activity and function in vitro when examined as individual species. Here we examined the effects of Co(2+):Cr(3+) and Co(2+):Cr(6+) combinations on osteoblast-like SaOS-2 cellular activity, alkaline phosphatase (ALP) activity and mineralization to better reflect clinical exposure conditions in vivo. We also assessed the effect of Co(2+):Cr(3+) combinations and Co:Cr nanoparticles on SaOS-2 cell osteogenic responses on grit-blasted, plasma-sprayed titanium-coated, and hydroxyapatite-coated prosthesis surfaces. Cellular activity and ALP activity were reduced to a greater extent with combination treatments compared to individual ions. Co(2+) and Cr(3+) interacted additively and synergistically to reduce cellular activity and ALP activity, respectively, while the Co(2+) with Cr(6+) combination was dominated by the effect of Cr(6+) alone. Mineralization by osteoblasts was greater on hydroxyapatite-coated surfaces compared to grit-blasted and plasma-sprayed titanium-coated surfaces. Treatments with Co(2+):Cr(3+) ions and Co:Cr nanoparticles reduced the percentage mineralization on all surfaces, with hydroxyapatite-coated surfaces having the least reduction. In conclusion, our data suggests that previous studies investigating individual metal ions underestimate their potential clinical effects on osteoblast activity. Furthermore, the data suggests that hydroxyapatite-coated surfaces may modulate osteoblast responses to metal debris.
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- 2015
32. Understanding the tissue effects of tribo-corrosion: uptake, distribution, and speciation of cobalt and chromium in human bone cells
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Paul D. Quinn, Alison Gartland, Karan M. Shah, and J. Mark Wilkinson
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Chromium ,Osteoclasts ,Osteolysis ,Endocytosis ,Bone and Bones ,Cell membrane ,Osteoclast ,Bone cell ,medicine ,Humans ,Orthopedics and Sports Medicine ,Receptor ,Cation Transport Proteins ,Cells, Cultured ,Epithelial polarity ,Osteoblasts ,Chemistry ,Spectrometry, X-Ray Emission ,Osteoblast ,Anatomy ,Cobalt ,Corrosion ,Radiography ,medicine.anatomical_structure ,X-Ray Absorption Spectroscopy ,Biophysics ,Receptors, Purinergic P2X7 ,Oxidation-Reduction ,Intracellular - Abstract
Cobalt and chromium species are released in the local tissues as a result of tribo-corrosion, and affect bone cell survival and function. However we have little understanding of the mechanisms of cellular entry, intracellular distribution, and speciation of the metals that result in impaired bone health. Here we used synchrotron based X-ray fluorescence (XRF), X-ray absorption spectroscopy (XAS), and fluorescent-probing approaches of candidate receptors P2X7R and divalent metal transporter-1 (DMT-1), to better understand the entry, intra-cellular distribution and speciation of cobalt (Co) and chromium (Cr) in human osteoblasts and primary human osteoclasts. We found that both Co and Cr were most highly localized at nuclear and perinuclear sites in osteoblasts, suggesting uptake through cell membrane transporters, and supported by a finding that P2X7 receptor blockade reduced cellular entry of Co. In contrast, metal species were present at discrete sites corresponding to the basolateral membrane in osteoclasts, suggesting cell entry by endocytosis and trafficking through a functional secretory domain. An intracellular reduction of Cr6+ to Cr3+ was the only redox change observed in cells treated with Co2+, Cr3+, and Cr6+. Our data suggest that the cellular uptake and processing of Co and Cr differs between osteoblasts and osteoclasts. © 2014 The Authors. Journal of Orthopaedic Research published by Wiley Periodicals, Inc. on behalf of the Orthopaedic Research Society. J Orthop Res 33:114–121, 2015.
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- 2014
33. Effects of cobalt and chromium ions at clinically equivalent concentrations after metal-on-metal hip replacement on human osteoblasts and osteoclasts: implications for skeletal health
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Alison Gartland, Rebecca E. Andrews, J. Mark Wilkinson, and Karan M. Shah
- Subjects
musculoskeletal diseases ,Chromium ,medicine.medical_specialty ,Histology ,Time Factors ,Physiology ,Cell Survival ,Hip resurfacing ,Endocrinology, Diabetes and Metabolism ,Arthroplasty, Replacement, Hip ,Osteoclasts ,Bone and Bones ,Osteoclast ,Osteogenesis ,Internal medicine ,Bone cell ,medicine ,Synovial fluid ,Humans ,Viability assay ,Bone Resorption ,Human osteoclast ,Ions ,Human osteoblast ,Osteoblasts ,biology ,Chemistry ,Osteoblast ,Cell Differentiation ,Cobalt ,Resorption ,Surgery ,medicine.anatomical_structure ,Endocrinology ,Metal-on-metal hip replacement ,RANKL ,Health ,Dentin ,biology.protein ,Alkaline phosphatase - Abstract
Metal-on-metal hip replacement (MOMHR) using large diameter bearings has become a popular alternative to conventional total hip arthroplasty, but is associated with elevated local tissue and circulating levels of chromium (Cr) and cobalt (Co) ions that may affect bone health. We examined the effects of acute and chronic exposure to these metals on human osteoblast and osteoclast formation and function over a clinically relevant concentration range previously reported in serum and within hip synovial fluid in patients after MOMHR. SaOS-2 cells were cultured with Co(2+), Cr(3+) and Cr(6+) for 3 days after which an MTS assay was used to assess cell viability, for 13 days after which alkaline phosphatase and cell viability were assessed and for 21 days after which nodule formation was assessed. Monocytes were isolated from human peripheral blood and settled onto dentine disks then cultured with M-CSF and RANKL plus either Co(2+), Cr(3+) or Cr(6+) ions for 21 days from day 0 or between days 14 and 21. Cells were fixed and stained for TRAP and osteoclast number and amount of resorption per dentine disk determined. Co(2+) and Cr(3+) did not affect osteoblast survival or function over the clinically equivalent concentration range, whilst Cr(6+) reduced osteoblast survival and function at concentrations within the clinically equivalent serum range after MOMHR (IC(50) =2.2 μM). In contrast, osteoclasts were more sensitive to metal ions exposure. At serum levels a mild stimulatory effect on resorption in forming osteoclasts was found for Co(2+) and Cr(3+), whilst at higher serum and synovial equivalent concentrations, and with Cr(6+), a reduction in cell number and resorption was observed. Co(2+) and Cr(6+) within the clinical range reduced cell number and resorption in mature osteoclasts. Our data suggest that metal ions at equivalent concentrations to those found in MOMHR affect bone cell health and may contribute to the observed bone-related complications of these prostheses.
- Published
- 2011
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