13 results on '"Kamini A. Mishra"'
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2. Binding Between Cyclohexanohemicucurbit[n]urils and Polar Organic Guests
- Author
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Lukas Ustrnul, Tatsiana Burankova, Mario Öeren, Kristina Juhhimenko, Jenni Ilmarinen, Kristjan Siilak, Kamini A. Mishra, and Riina Aav
- Subjects
supramolecular chemistry ,binding evaluation ,hemicucurbit[n]uril ,hydrogen bond ,complex stoichiometry ,NMR ,Chemistry ,QD1-999 - Abstract
Inherently chiral, barrel-shaped, macrocyclic hosts such as cyclohexanohemicucurbit[n]urils (cycHC[n]) bind zinc porphyrins and trifluoroacetic acid externally in halogenated solvents. In the current study, we tested a set of eighteen organic guests with various functional groups and polarity, namely, thiophenols, phenols, and carboxylic and sulfonic acids, to identify a preference toward hydrogen bond–donating molecules for homologous cycHC[6] and cycHC[8]. Guests were characterized by Hirshfeld partial charges on acidic hydrogens and their binding by 1H and 19F NMR titrations. Evaluation of association constants revealed the complexity of the system and indirectly proved an external binding with stoichiometry over 2:1 for both homologs. It was found that overall binding strength is influenced by the stoichiometry of the formed complexes, the partial atomic charge on the hydrogen atom of the hydrogen bond donor, and the bulkiness of the guest. Additionally, a study on the formation of complexes with halogen anions (Cl− and Br−) in methanol and chloroform, analyzed by 1H NMR, did not confirm complexation. The current study widens the scope of potential applications for host molecules by demonstrating the formation of hydrogen-bonded complexes with multisite hydrogen bond acceptors such as cycHC[6] and cycHC[8].
- Published
- 2021
- Full Text
- View/download PDF
3. Self-Assembly of Chiral Cyclohexanohemicucurbit[n]urils with Bis(Zn Porphyrin): Size, Shape, and Time-Dependent Binding
- Author
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Marko Šakarašvili, Lukas Ustrnul, Elina Suut, Jagadeesh Varma Nallaparaju, Kamini A. Mishra, Nele Konrad, Jasper Adamson, Victor Borovkov, and Riina Aav
- Subjects
supramolecular chemistry ,noncovalent interaction ,hemicucurbituril ,bis–porphyrin ,metalloporphyrin ,chirogenesis ,Organic chemistry ,QD241-441 - Abstract
In order to investigate the ability of bis(zinc octaethylporphyrin) (bis–ZnOEP) to discriminate cyclohexanohemicucurbit[n]urils (cycHC[n]) of different shapes and sizes, the self-assembly of barrel-shaped chiral cycHC[n] with bis–ZnOEP was studied by various spectroscopic methods (absorption, fluorescence, circular dichroism (CD), and NMR). While the binding of 6-membered cycHC[6] induced a tweezer-like conformation followed by the formation of anti-form of bis–ZnOEP upon further addition of cycHC[6], the interaction of 8-membered cycHC[8] is more complex and proceeds through the featured syn-to-anti conformational change of bis–ZnOEP and further intermolecular self-assembly via multiple noncovalent associations between cycHC[8] and bis–ZnOEP. Whilst bis–porphyrins are known to be effective chemical sensors able to differentiate various guests based on their chirality via induced CD, their ability to sense small differences in the shape and size of relatively large macrocycles, such as chiral cycHC[6] and cycHC[8], is scarcely examined. Both studied complexes exhibited characteristic induced CD signals in the region of porphyrin absorption upon complexation.
- Published
- 2022
- Full Text
- View/download PDF
4. The Breaking of Symmetry Leads to Chirality in Cucurbituril-Type Hosts
- Author
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Riina Aav and Kamini A. Mishra
- Subjects
cucurbiturils ,hemicucurbiturils ,chirality ,supramolecular chirality ,symmetry breaking ,helixes ,Mathematics ,QA1-939 - Abstract
Cucurbituril-type hosts are highly symmetric, but there are means to break their symmetry. This review will present examples from three directions of induction of chirality in or by cucurbituril-type hosts: first, through the incorporation of stereogenic elements into host molecules; second, through complexation with achiral guests, which leads to axial supramolecular chirality and helical structures; third, through the formation of complexes with chiral guests in multi-molecule complexes and induction of supramolecular chirality. In addition, a list of chiral guests used in binding studies with cucurbiturils is collected. We would envision that encouraged by the outlined examples of outstanding applications of chiral cucurbituril-supramolecular systems, the boundaries of chiral applications of cucurbiturils would be widened.
- Published
- 2018
- Full Text
- View/download PDF
5. Self-Assembly of Chiral Cyclohexanohemicucurbit[
- Author
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Marko, Šakarašvili, Lukas, Ustrnul, Elina, Suut, Jagadeesh Varma, Nallaparaju, Kamini A, Mishra, Nele, Konrad, Jasper, Adamson, Victor, Borovkov, and Riina, Aav
- Abstract
In order to investigate the ability of bis(zinc octaethylporphyrin) (
- Published
- 2021
6. Binding Between Cyclohexanohemicucurbit[n]urils and Polar Organic Guests
- Author
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Jenni Ilmarinen, Tatsiana Burankova, Kamini A. Mishra, Mario Öeren, Kristjan Siilak, Kristina Juhhimenko, Riina Aav, and Lukas Ustrnul
- Subjects
hydrogen bond ,binding evaluation ,Hydrogen bond ,Chemistry ,Supramolecular chemistry ,General Chemistry ,Fluorine-19 NMR ,Medicinal chemistry ,supramolecular chemistry ,NMR ,Partial charge ,chemistry.chemical_compound ,Halogen ,Proton NMR ,Trifluoroacetic acid ,hemicucurbit[n]uril ,Molecule ,complex stoichiometry ,QD1-999 - Abstract
Inherently chiral, barrel-shaped, macrocyclic hosts such as cyclohexanohemicucurbit[n]urils (cycHC[n]) bind zinc porphyrins and trifluoroacetic acid externally in halogenated solvents. In the current study, we tested a set of eighteen organic guests with various functional groups and polarity, namely, thiophenols, phenols, and carboxylic and sulfonic acids, to identify a preference toward hydrogen bond–donating molecules for homologous cycHC[6] and cycHC[8]. Guests were characterized by Hirshfeld partial charges on acidic hydrogens and their binding by 1H and 19F NMR titrations. Evaluation of association constants revealed the complexity of the system and indirectly proved an external binding with stoichiometry over 2:1 for both homologs. It was found that overall binding strength is influenced by the stoichiometry of the formed complexes, the partial atomic charge on the hydrogen atom of the hydrogen bond donor, and the bulkiness of the guest. Additionally, a study on the formation of complexes with halogen anions (Cl− and Br−) in methanol and chloroform, analyzed by 1H NMR, did not confirm complexation. The current study widens the scope of potential applications for host molecules by demonstrating the formation of hydrogen-bonded complexes with multisite hydrogen bond acceptors such as cycHC[6] and cycHC[8].
- Published
- 2021
7. Cyclohexanohemicucurbit[8]uril forms inclusion complexes with heterocycles and removes sulfuric guests from water via solid-phase extraction
- Author
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Kamini A. Mishra, Tatsiana Shalima, Bartkova S, Riina Aav, Heinmaa I, Sandra Kaabel, Lukas Ustrnul, and Tõnsuaadu K
- Subjects
chemistry.chemical_compound ,Chemistry ,Hemicucurbituril ,Inorganic chemistry ,Extraction (chemistry) ,chemistry.chemical_element ,Sorption ,Water extraction ,Solid phase extraction ,Inclusion (mineral) ,Sulfur - Abstract
We found that cyclohexanohemicucurbit[8]uril encapsulates five- and six-membered sulfur- and oxygen-containing unsubstituted heterocycles and can be used as a selective sorption material for the extraction of sulfur-heterocycles like 1,3-dithiolane and α‑lipoic acid from water.
- Published
- 2021
8. Binding of Heterocycles by Cyclohexanohemicucurbiturils and Solid-Phase Extraction of Sulfur-Containing Heterocycles from Water
- Author
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Heinmaa I, Sandra Kaabel, Lukas Ustrnul, Tatsiana Shalima, Bartkova S, Riina Aav, Kamini A. Mishra, and Tõnsuaadu K
- Subjects
Chemistry ,Organic chemistry ,Solid phase extraction ,Sulfur containing - Abstract
Here we report a study on cyclohexanohemicucurbit[8]uril (cycHC[8]) binding of sulfur-, oxygen- and nitrogen-containing heterocycles in both solid state and solution, which is investigated by single crystal X-ray diffraction, NMR spectroscopy, isothermal titration calorimetry, and thermogravimetry. Potential guests include environmental pollutants, hazardous compounds, and bioactive substances. We found that cycHC[8] encapsulates five- and six-membered sulfur- and oxygen-containing unsubstituted heterocycles and can be used as a selective sorption material for the extraction of sulfur-heterocycles from water. Both cycHC[6] and cycHC[8] can remove a substituted heterocycle, α-lipoic acid, from an aqueous solution via the formation of an external complex. The results show that cycHC[n] is a promising reusable sorbent material with the potential to be employed in molecular recognition and highly specific solid-phase extraction of sulfur-heterocycles.
- Published
- 2021
9. Dynamic chiral cyclohexanohemicucurbit[12]uril
- Author
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Maria Fomitšenko, Kamini A. Mishra, Riina Aav, Jasper Adamson, Mario Öeren, and Sandra Kaabel
- Subjects
Flexibility (anatomy) ,Materials science ,Structure analysis ,Metals and Alloys ,General Chemistry ,Methylene bridge ,Nuclear magnetic resonance spectroscopy ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,Crystallography ,medicine.anatomical_structure ,Monomer ,chemistry ,Hemicucurbituril ,medicine ,Materials Chemistry ,Ceramics and Composites ,Confined space - Abstract
This research with title "Dynamic chiral cyclohexanohemicucurbit[12]uril" is dedicated to the memory of late Professor Hans J. Reich.Abstract:NMR and DFT studies of chiral cyclohexanohemicucurbit[12]uril indicate that the macrocycle adopts a concave octagon shape with three distinct ranges of conformational flexibility in solution. Methylene bridge flipping occurs at temperatures above 265 K, while urea monomers rotate at temperatures above 308 K resulting in the loss of confined space within the macrocycle.
- Published
- 2020
10. Rapid Mechanochemical Synthesis of Amides with Uronium-Based Coupling Reagents, a Method for Hexa-amidation of Biotin[6]uril
- Author
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Tatsiana Dalidovich, Kamini A. Mishra, Tatsiana Shalima, Marina Kudrjašova, Dzmitry Kananovich, and Riina Aav
- Abstract
Solid-state reactions using mechanochemical activation have emerged as solvent-free atom-efficient strategies for sustainable chemistry. Herein we report a new mechanochemical approach for the amide coupling of carboxylic acids and amines, mediated by combination of (1-сyano-2-ethoxy-2-oxoethylidenaminooxy)dimethylaminomorpholinocarbenium hexafluorophosphate (COMU) or N,N,N′,N′-tetramethylchloroformamidinium hexafluorophosphate (TCFH) and K2HPO4. The method delivers a range of amides in high 70–96% yields and fast reaction rates. The reaction protocol is mild, maintains the integrity of the adjacent to carbonyl stereocenters, and streamlines isolation procedure for solid amide products. Minimal waste is generated due to the absence of bulk solvent. We show that K2HPO4 plays a dual role, acting as a base and a precursor of reactive acyl phosphate species. Amide bonds from hindered carboxylic acids and low-nucleophilic amines can be assembled within 90 min by using TCFH in combination with K2HPO4 or N-methylimidazole. The developed mechanochemical liquid-assisted amidation protocols were successfully applied to the challenging couplings of all six carboxylate functions of biotin[6]uril macrocycle with phenylalanine methyl ester, resulting in an 80% yield of highly pure hexa-amide-biotin[6]uril. In addition, fast and high-yielding synthesis of peptides and versatile amide compounds can be performed in a safe and environmentally benign manner, as verified by green metrics.
- Published
- 2020
11. The Breaking of Symmetry Leads to Chirality in Cucurbituril-Type Hosts
- Author
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Kamini A. Mishra and Riina Aav
- Subjects
Supramolecular chirality ,hemicucurbiturils ,Physics and Astronomy (miscellaneous) ,General Mathematics ,High Energy Physics::Lattice ,chirality ,supramolecular chirality ,Type (model theory) ,010402 general chemistry ,01 natural sciences ,symmetry breaking ,Stereocenter ,Cucurbituril ,helixes ,Computer Science (miscellaneous) ,Molecule ,Symmetry breaking ,Physics ,010405 organic chemistry ,cucurbiturils ,lcsh:Mathematics ,High Energy Physics::Phenomenology ,lcsh:QA1-939 ,0104 chemical sciences ,Crystallography ,Chemistry (miscellaneous) ,Symmetry (geometry) ,Chirality (chemistry) - Abstract
Cucurbituril-type hosts are highly symmetric, but there are means to break their symmetry. This review will present examples from three directions of induction of chirality in or by cucurbituril-type hosts: first, through the incorporation of stereogenic elements into host molecules; second, through complexation with achiral guests, which leads to axial supramolecular chirality and helical structures; third, through the formation of complexes with chiral guests in multi-molecule complexes and induction of supramolecular chirality. In addition, a list of chiral guests used in binding studies with cucurbiturils is collected. We would envision that encouraged by the outlined examples of outstanding applications of chiral cucurbituril-supramolecular systems, the boundaries of chiral applications of cucurbiturils would be widened.
- Published
- 2018
12. Mechanochemical Synthesis of Amides with Uronium-Based Coupling Reagents: A Method for Hexa-amidation of Biotin[6]uril
- Author
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Marina Kudrjašova, Tatsiana Shalima, Dzmitry G. Kananovich, Kamini A. Mishra, Riina Aav, and Tatsiana Dalidovich
- Subjects
Green chemistry ,Renewable Energy, Sustainability and the Environment ,General Chemical Engineering ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,HEXA ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,Coupling (electronics) ,chemistry.chemical_compound ,Biotin ,chemistry ,Hemicucurbituril ,Mechanochemistry ,Amide ,Reagent ,Environmental Chemistry ,0210 nano-technology - Abstract
Solvent-free, atom-efficient, and mechanochemically activated reactions have emerged as synthetic strategy for sustainable chemistry. Herein we report a new mechanochemical approach for the amide c...
- Full Text
- View/download PDF
13. Cyclohexanohemicucurbit[8]uril Inclusion Complexes With Heterocycles and Selective Extraction of Sulfur Compounds From Water
- Author
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Tatsiana Shalima, Kamini A. Mishra, Sandra Kaabel, Lukas Ustrnul, Simona Bartkova, Kaia Tõnsuaadu, Ivo Heinmaa, and Riina Aav
- Subjects
heterocycles ,010405 organic chemistry ,SC-XRD ,General Chemistry ,lipoic acid ,010402 general chemistry ,01 natural sciences ,Hemicucurbituril ,sorbent recycling ,0104 chemical sciences ,Chemistry ,MAS NMR ,solid-phase extraction ,QD1-999 ,inclusion complex ,Original Research - Abstract
Solid-phase extraction that utilizes selective macrocyclic receptors can serve as a useful tool for removal of chemical wastes. Hemicucurbiturils are known to form inclusion complexes with suitably sized anions; however, their use in selective binding of non-charged species is still very limited. In this study, we found that cyclohexanohemicucurbit[8]uril encapsulates five- and six-membered sulfur- and oxygen-containing unsubstituted heterocycles, which is investigated by single-crystal X-ray diffraction, NMR spectroscopy, isothermal titration calorimetry, and thermogravimetry. The macrocycle acts as a promising selective sorption material for the extraction of sulfur heterocycles, such as 1,3-dithiolane and α-lipoic acid, from water.
- Full Text
- View/download PDF
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