30 results on '"Kalaimathi K"'
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2. Molecular structure properties, quantum computational, electronic, charge analyses and biological (drug-likeness and docking) studies on anti-inflammatory drug molecule of Balsalazide
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Devagi, E., Rajasekaran, L., Kalaimathi, K., Manikandan, P., Jeelani, A., Akman, Feride, Manikandan, A., Javed, Saleem, and Muthu, S.
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- 2024
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3. Exploring the Drug Potential of Phytochemicals as a Novel Therapeutic Drug Candidate for Herpesvirus: An In-silico Evaluation
- Author
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Rani, A. Christy, Kalaimathi, K., Jayasree, S., Prabhu, S., Vijayakumar, S., Ramasubbu, Raju, and Priya, N. Sathammai
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- 2023
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4. Uncovering of Anti-dengue Molecules from Plants Prescribed for Dengue: A Computational Investigation
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Rani, A. Christy, Sujitha, S., Kalaimathi, K., Vijayakumar, S., Varatharaju, G., Karthikeyan, K., Thiyagarajan, G., Sanjeevi, S. Baskara, and Prabhu, S.
- Published
- 2022
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5. Cyanobacterial metabolites as novel potential suppressors of breast cancer: A comparative in silico pharmacological assessment
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Kalaimathi, K., Shine, K., Rajiv Gandhi, G., Vijayakumar, S., Ayyanar, M., Amalraj, S., Varatharaju, G., Thiruvengadam, M., Antony Ceasar, S., Prabhu, S., and Jose, Jiya
- Published
- 2023
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6. Anti-dengue Potential of Mangiferin: Intricate Network of Dengue to Human Genes
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Kalaimathi, K., Rani, J. Maria Jancy, Vijayakumar, S., Prakash, N., Karthikeyan, K., Thiyagarajan, G., Bhavani, K., Prabhu, S., and Varatharaju, G.
- Published
- 2022
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7. Molecular docking and network pharmacology-based approaches to explore the potential of terpenoids for Mycobacterium tuberculosis
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Kalaimathi, K., Thiyagarajan, G., Vijayakumar, S., Bhavani, K., Karthikeyan, K., Maria Jancy Rani, J., Dass, K., Sureshkumar, J., and Prabhu, S.
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- 2021
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8. Molecular structure Properties, Quantum computational, Electronic, charge analyses and Biological (drug-likeness and Docking) studies on anti-inflammatory drug molecule of Balsalazide
- Author
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Devagi, E., primary, Rajasekaran, L., additional, Kalaimathi, K., additional, Manikandan, P., additional, Jeelani, A., additional, Akman, Feride, additional, Manikandan, A., additional, Javed, Saleem, additional, and Muthu, S., additional
- Published
- 2023
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9. Cyanobacterial metabolites as novel inhibitors of BACE1 implicated in Alzheimer's disease through in silico approaches.
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Kalaimathi, K., Prabhu, S., Ayyanar, M., Shine, K., Thiruvengadam, M., and Amalraj, S.
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- *
CYANOBACTERIA , *ALZHEIMER'S disease treatment , *MOLECULAR docking , *HYDROGEN bonding , *PROTEIN-ligand interactions - Abstract
Alzheimer's disease (AD) is a complex neurodegenerative disease with a limited number of therapeutic options. β-Secretase 1 (BACE1) is a key enzyme involved in the production of amyloid beta peptides, which are central to AD pathology. Targeting BACE1 has emerged as a promising strategy for the treatment of AD. Therefore, the present study aimed to discover novel drug candidates from cyanobacteria for the treatment of AD through in silico research. In this study, Schrödinger tools were used to study the binding affinities and interactions of cyanobacteria metabolites with BACE1. Almost 120 cyanobacteria metabolites against BACE1 were used for the computational investigation. Ultimately, four marine-derived compounds, namely lyngbyastatin 7, homodolastin 3, lyngbyabellin E1, and symplostatin analogue 4, showed strong binding affinities to the active site of BACE1, forming crucial hydrogen bonds and hydrophobic interactions. The binding energy values of these compounds suggest their potential as BACE1 inhibitors. Furthermore, molecular dynamics simulations confirmed the stability of these ligand-protein complexes over a period of 25 ns? Our results provide valuable insights into the potential of lyngbyastatin 7, homodolastin 3, lyngbyabellin E1, and symplostatin analog 4 as effective drugs for inhibiting BACE1. These marine-derived compounds are promising for further in vitro and in vivo studies. The present research suggests that these molecules could offer new avenues for the development of novel therapeutics for the treatment of Alzheimer's disease. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Exploring the Drug Potential of Phytochemicals as a Novel Therapeutic Drug Candidate for Herpesvirus: An In-silico Evaluation
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Rani, A. Christy, primary, Kalaimathi, K., additional, Jayasree, S., additional, Prabhu, S., additional, Vijayakumar, S., additional, Ramasubbu, Raju, additional, and Priya, N. Sathammai, additional
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- 2022
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11. Rosmarinic acid as a novel biomedical drug for inhibiting the replication of herpes and dengue viruses: An In-silico assessment
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Rani, A. Christy, primary, Kalaimathi, K., additional, Jayasree, S., additional, Murugesan, S, additional, S, Prabhu, additional, and Cherian, Pinkie, additional
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- 2022
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12. Anti-viral effectuality of plant polyphenols against mutated dengue protein NS2B47-NS3: A computational exploration
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Rani, J. Maria Jancy, primary, Kalaimathi, K., additional, Vijayakumar, S., additional, Varatharaju, G., additional, Karthikeyan, K., additional, Thiyagarajan, G., additional, Bhavani, K., additional, Manogar, P., additional, and Prabhu, S., additional
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- 2022
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13. In Vitro and In Silico Strategies for the Assessment of Fungicidal Compounds from the Bark of Bauhinia racemosa Against Dermatitis: Clinical Isolates
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Kalaimathi, K., primary, Rani, J. Maria Jancy, additional, Manogar, P., additional, Vijayakumar, S., additional, Prakash, N., additional, Karthikeyan, K., additional, Thiyagarajan, G., additional, Bhavani, K., additional, and Prabhu, S., additional
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- 2022
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14. NFC Identification System for Fuel Management
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Jesus Sandal Vinibha G, Kamalakkanni P, Kalaimathi K, Rajesh R, and Kamatchi
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Computer science ,Automotive engineering ,Identification system - Published
- 2019
15. Anti-cancerous Activities of Anthocyanins of Banana cv. Nendran (Musa sp.) Flower Bracts against Human Colon and Cervical Cancer Cell Lines
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Suman, R., primary, Kalaimathi, K., additional, Palanichamy, S., additional, Sowmiya, R., additional, Vaganan, M. Mayil, additional, Ravi, I., additional, and Uma, S., additional
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- 2018
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16. Mechanism of Oxidation of (p-Substituted Phenylthio)acetic Acids withN-Bromophthalimide
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Alhaji, N. M. I., primary, Mohideen, A. M. Uduman, additional, and Kalaimathi, K., additional
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- 2011
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17. Mechanism of Oxidation of (p-Substituted Phenylthio)acetic Acids with N-Bromophthalimide.
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Alhaji, N. M. I., Uduman Mohideen, A. M., and Kalaimathi, K.
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OXIDATION ,PERCHLORIC acid ,ACETONITRILE ,SOLVENTS ,ACRYLONITRILE ,POTASSIUM bromide - Abstract
The kinetics of oxidation of (phenylthio)acetic acid (PTAA) by N-Bromophthalimide (NBP) in acetonitrile-water solvent mixture at 298 K in the presence of perchloric acid has been followed potentiometrically. The reaction is first-order each in NBP and PTAA and inverse fractional-order in H+. Also, it has been found that the reaction rate is not affected by changes in ionic strength of the reaction medium or by the addition of chemicals such as phthalimide, acrylonitrile and potassium bromide. However, an increase in the water content of the solvent mixture causes an increase in the rate of reaction. These observations have been well analyzed in favour of a SN2-type mechanism, involving NBP itself as the reactive species. Effect of substituents on the reaction rate has been analysed by employing various (p-sustituted phenylthio)acetic acids. The electron-releasing substituent in the phenyl ring of PTAA accelerates the reaction rate while the electron-withdrawing substituent retards the rate. The excellently linear Hammett plot yields a large negative r value, supporting the involvement a bromosulphonium ion intermediate in the rate-determining step. [ABSTRACT FROM AUTHOR]
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- 2011
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18. Mechanism of Oxidation of (p-Substituted Phenylthio)acetic Acids with N-Bromophthalimide
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M. I. Alhaji, N., M. Uduman Mohideen, A., and Kalaimathi, K.
- Abstract
The kinetics of oxidation of (phenylthio)acetic acid (PTAA) by N-Bromophthalimide (NBP) in acetonitrile-water solvent mixture at 298 K in the presence of perchloric acid has been followed potentiometrically. The reaction is first-order each in NBP and PTAA and inverse fractional-order in H+. Also, it has been found that the reaction rate is not affected by changes in ionic strength of the reaction medium or by the addition of chemicals such as phthalimide, acrylonitrile and potassium bromide. However, an increase in the water content of the solvent mixture causes an increase in the rate of reaction. These observations have been well analyzed in favour of a SN2-type mechanism, involving NBP itself as the reactive species. Effect of substituents on the reaction rate has been analysed by employing various (p-sustituted phenylthio)acetic acids. The electron-releasing substituent in the phenyl ring of PTAA accelerates the reaction rate while the electron-withdrawing substituent retards the rate. The excellently linear Hammett plot yields a large negative ρ value, supporting the involvement a bromosulphonium ion intermediate in the rate-determining step.
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- 2011
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19. Bipolar Disorder in a Young Adult With Thalassemia Major With Sequential Development of Neuroleptic Malignant Syndrome and Serotonin Syndrome.
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Ragul Kalaimathi K, Thakur MR, and Garg B
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- 2024
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20. Unravelling the Untapped Pharmacological Potential of Plant Molecules as Inhibitors of BACE1: In Silico Explorations for Alzheimer's Disease.
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Kalaimathi K, Prabhu S, Ayyanar M, Thiruvengadam M, Shine K, Vijaya Prabhu S, and Amalraj S
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- Humans, Phytochemicals chemistry, Phytochemicals pharmacology, Neuroprotective Agents pharmacology, Neuroprotective Agents chemistry, Polyphenols chemistry, Polyphenols pharmacology, Alzheimer Disease drug therapy, Alzheimer Disease metabolism, Amyloid Precursor Protein Secretases antagonists & inhibitors, Amyloid Precursor Protein Secretases metabolism, Aspartic Acid Endopeptidases antagonists & inhibitors, Aspartic Acid Endopeptidases metabolism, Molecular Docking Simulation
- Abstract
Alzheimer's disease (AD) is an extremely complex, heterogeneous, and multifactorial neurodegenerative disease clinically characterized by progressive memory loss and progressive decline in cognitive function. There is currently no effective treatment for the onset and/or progression of the pathophysiological diseases of AD. The global prevalence of this disease has increased in recent years due to modern lifestyle. Therefore, there is an urgent need to develop a drug with significant neuroprotective potential. Since plant metabolites, especially polyphenols, have important pharmacological properties acting against β-amyloid (Aβ), Tau, neuroinflammation, and oxidative stress, such phytochemicals were selected in the present research. Using the Schrödinger tool (Maestro V.13.6), the drug potency of these metabolites was studied after installation in the highly configured workstation. Among the 120 polyphenols docked, amygdalin showed notable docking values of - 11.2638, followed by eriocitrin (- 10.9569), keracyanin (- 10.7086), and amaroswerin (- 9.48126). The prominent MM-GBSA values of these molecules were - 62.8829, - 52.1914, - 68.6307, and - 63.1074, respectively. The MM-GBSA energy values demonstrated the drug stability of these molecules for β-site amyloid precursor protein-cleaving enzyme 1 (BACE1)-causing AD. In the absorption and distribution assessment, these phytochemicals showed significantly better values than the inhibitors CNP520. The chosen phytochemicals have been demonstrated as non-hepatotoxic; however, the BACE1 inhibitor CNP520 is hepatotoxic. In both the molecular docking and ADMET assessments, these natural chemicals have shown optimism as potential drug candidates for Alzheimer's disease. However, in order to understand the detailed biological metabolism of these compounds in AD, they need to be evaluated in in vivo studies to validate its efficacy., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2024
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21. Botany, traditional usages, phytochemistry, pharmacology, and toxicology of Guilandina bonduc L.: a systematic review.
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Srinivasan P, Karunanithi K, Muniappan A, Singamoorthy A, Kadaikunnan S, Narayanan SP, Thiruvengadam M, and Nagamuthu P
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- Animals, Humans, Medicine, Traditional, Plant Extracts pharmacology, Plant Extracts toxicity, Plant Extracts chemistry, Plant Extracts therapeutic use, Phytotherapy, Ethnopharmacology, Phytochemicals pharmacology, Phytochemicals toxicity, Phytochemicals isolation & purification, Phytochemicals chemistry, Phytochemicals therapeutic use
- Abstract
Guilandina bonduc L. is popularly known as a fever nut that grows widely in evergreen forests and moist deciduous forests with a pantropical distribution. The plant is highly therapeutic in various systems of medicine, including Ayurveda, Siddha, and homeopathy. The purpose of this review is to analyze the published data on G. bonduc, including traditional uses, taxonomic position, botanical description, phytochemistry, pharmacological properties, and toxicological assessment of its various parts. Phytochemical and pharmacological studies were the main focus of this review. The previously published research on G. bonduc was tracked from scientific databases such as Online Library, Google, Taylor and Francis, PubMed, Research Gate, Scopus, Springer, Wiley, Web of Sciences. Numerous phytochemical, pharmaceutical, and pharmacological studies have been carried out on the various parts of G. bonduc. To date, more than 97 phytochemicals have been isolated from the leaves, roots, stems, stem bark, flowers, twigs, and seeds of this plant. The phytochemicals isolated from the plants are flavonoids, homoisoflavonoids, terpenoids, diterpenoids, steroids, fatty acids, alkanes, acids, phenols, ketones, esters, amides, azides, silanes, and ether groups. This plant has been extensively studied in in vitro and in vivo pharmacological experiments, where it showed analgesic, anti-inflammatory, antioxidant, antiviral, antidiabetic, abortive, anticataleptic, immunomodulatory, and antiestrogenic effects. This comprehensive review revealed that phytochemicals isolated from various parts of G. bonduc have significant therapeutic efficacy, with promising anticancer, antidiabetic, hepatoprotective, antioxidant, and antimicrobial activities. This review provides a good source of information for the development of a drug using modern scientific tools, in view of its underexplored traditional uses. Further studies on preclinical and clinical trials and toxicological studies on the bioactive molecules of G. bonduc to validate its traditional uses are warranted., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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22. ( R )-(+)-Rosmarinic Acid as an Inhibitor of Herpes and Dengue Virus Replication: an In Silico Assessment.
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Samy CRA, Karunanithi K, Sheshadhri J, Rengarajan M, Srinivasan P, and Cherian P
- Abstract
Since ancient times, viruses such as dengue, herpes, Ebola, AIDS, influenza, chicken meat, and SARS have been roaming around causing great health burdens. Currently, the prescribed antiviral drugs have not cured the complications caused by viruses, whereas viral replication was not controlled by them. The treatments suggested are not only ineffectual, but also sometimes inefficient against viruses at all stages of the viral cycle as well. To fight against these contagious viruses, people rely heavily on medicinal plants to enhance their innate and adaptive immune systems. In this research, the preparation of ligands and proteins was performed using the Maestro V.13.2 module tool. This software, consisting of LigPrep, Grid Generation, SiteMap, and Glide XP, has each contributed significantly to the preparation of ligands and proteins. Ultimately, the research found that ( R )-(+)-rosmarinic acid was found to have significant docking scores of - 10.847 for herpes virus, of - 10.033 for NS5, and - 7.259 for NS1. In addition, the Prediction of Activity Spectra for Substances (PASS) server indicates that rosmarinic acid possesses a diverse spectrum of enzymatic activities, as probability active (Pa) values start at > 0.751, whereas it has fewer adverse effects than the drugs prescribed for viruses. Accordingly, it was found the rate of acute toxicity values of ( R )-(+)-rosmarinic acid at doses LD
50 log10 (mmol/g) and LD50 (mg/g) in different routes of administration, such as intraperitoneal, intravenous, oral, and subcutaneous. Ultimately, the present study concluded that ( R )-(+)-rosmarinic acid would expose significant antiviral effects in in vitro and in vivo experiments, and this research would be a valuable asset for the future, especially for those who wish to discover a drug molecule for a variety of viruses., Supplementary Information: The online version contains supplementary material available at 10.1007/s43450-023-00381-y., (© The Author(s) under exclusive licence to Sociedade Brasileira de Farmacognosia 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.)- Published
- 2023
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23. Tuftsin-Bearing Liposomes Co-Encapsulated with Doxorubicin and Curcumin Efficiently Inhibit EAC Tumor Growth in Mice.
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Murugesan K, Srinivasan P, Mahadeva R, Gupta CM, and Haq W
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- Animals, Antineoplastic Agents pharmacology, Apoptosis drug effects, Cell Proliferation drug effects, Curcumin adverse effects, Doxorubicin adverse effects, Doxorubicin pharmacology, Drug Carriers chemistry, Drug Compounding, Drug Liberation, Endocytosis drug effects, HeLa Cells, Humans, Kinetics, Mice, Particle Size, Polyethylene Glycols adverse effects, Polyethylene Glycols pharmacology, Spectroscopy, Fourier Transform Infrared, Tuftsin adverse effects, Carcinoma, Ehrlich Tumor pathology, Curcumin pharmacology, Doxorubicin analogs & derivatives, Tuftsin pharmacology
- Abstract
Background: Targeted multidrug-loaded delivery systems have emerged as an advanced strategy for cancer treatment. In this context, antibodies, hormones, and small peptides have been coupled to the surface of drug carriers, such as liposomes, polymeric and metallic nanoparticles loaded with drugs, as tumor-specific ligands. In the present study, we have grafted a natural macrophage stimulating peptide, tuftsin, on the surface of the liposomes (LPs) that were loaded with doxorubicin (DOX) and/or curcumin (CUR), by attaching to its C-terminus a palmitoyl residue (Thr-Lys-Pro-Arg-CO-NH-(CH
2 )2 -NH-COC15 H31 , P.Tuft) to enable its grafting within the liposome's bilayer., Methods: The prepared drug-loaded liposomes (DOX LPs, CUR LPs, DOX-CUR LPs, P.Tuft-LPs, P.Tuft-DOX LPs, P.Tuft-CUR LPs, P.Tuft-DOX-CUR LPs) were thoroughly characterised in terms of particle size, drug content, encapsulation efficiency and structural properties using UV-visible spectroscopy, dynamic light scattering (DLS) and Fourier transform infrared spectroscopy (FTIR). The anti-cancer activity and drug toxicity of the liposomal formulations were examined on Ehrlich ascites carcinoma (EAC) tumor-induced mice model., Results: A significant reduction in the tumor weight and volume was observed upon treating the tumor-bearing mice with palmitoyl tuftsin-grafted dual drug-loaded liposomes (P.Tuft-DOX-CUR LPs), as compared to the single drug/peptide-loaded formulation (DOX LPs, CUR LPs, DOX-CUR LPs, P.Tuft- LPs, P.Tuft-DOX LPs, P.Tuft-CUR LPs). Western blot analysis revealed that the tumor inhibition was associated with p53-mediated apoptotic pathway. Further, the biochemical and histological analysis revealed that the various liposomal preparation used in this study were non-toxic to the animals at the specified dose (10mg/kg)., Conclusion: In conclusion, we have developed a targeted liposomal formulation of P.Tuftsin-bearing liposomes co-encapsulated with effective anti-cancer drugs such as doxorubicin and curcumin. In experimental animals, tumor inhibition by P.Tuft-DOX-CUR LPs indicates the synergistic therapeutic effect of the peptide and the dual drug., Competing Interests: The authors report no conflicts of interest for this work., (© 2020 Murugesan et al.)- Published
- 2020
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24. Effects of green synthesised silver nanoparticles (ST06-AgNPs) using curcumin derivative (ST06) on human cervical cancer cells (HeLa) in vitro and EAC tumor bearing mice models.
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Murugesan K, Koroth J, Srinivasan PP, Singh A, Mukundan S, Karki SS, Choudhary B, and Gupta CM
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- Animals, Apoptosis drug effects, Caspase 3 metabolism, Caspase 9 metabolism, Cell Death drug effects, Disease Models, Animal, Female, HeLa Cells, Humans, Mice, Particle Size, Poly(ADP-ribose) Polymerases metabolism, Proto-Oncogene Proteins c-bcl-2 metabolism, Spectrometry, X-Ray Emission, Spectroscopy, Fourier Transform Infrared, Tissue Distribution drug effects, X-Ray Diffraction, Carcinoma, Ehrlich Tumor pathology, Curcumin pharmacology, Green Chemistry Technology methods, Metal Nanoparticles chemistry, Silver pharmacology, Uterine Cervical Neoplasms pathology
- Abstract
Background: In recent years, green synthesized silver nanoparticles have been increasingly investigated for their anti-cancer potential. In the present study, we aimed at the biosynthesis of silver nanoparticles (AgNPs) using a curcumin derivative, ST06. Although, the individual efficacies of silver nanoparticles or curcumin derivatives have been studied previously, the synergistic cytotoxic effects of curcumin derivative and silver nanoparticles in a single nanoparticulate formulation have not been studied earlier specifically on animal models. This makes this study novel compared to the earlier synthesized curcumin derivative or silver nanoparticles studies. The aim of the study was to synthesize ST06 coated silver nanoparticles (ST06-AgNPs) using ST06 as both reducing and coating agent., Methods: The synthesized nanoparticles AgNPs and ST06-AgNPs were characterised for the particle size distribution, morphology, optical properties and surface charge by using UV-visible spectroscopy, dynamic light scattering (DLS) and transmission electron microscopy (TEM). Elemental composition and structural properties were studied by energy dispersive X-ray spectroscopy (EDX) and X-ray diffraction spectroscopy (XRD). The presence of ST06 as capping agent was demonstrated by Fourier transform infrared spectroscopy (FTIR)., Results: The synthesized nanoparticles (ST06-AgNPs) were spherical and had a size distribution in the range of 50-100 nm. UV-Vis spectroscopy displayed a specific silver plasmon peak at 410 nm. The in vitro cytotoxicity effects of ST06 and ST06-AgNPs, as assessed by MTT assay, showed significant growth inhibition of human cervical cancer cell line (HeLa). In addition, studies carried out in EAC tumor-induced mouse model (Ehrlich Ascites carcinoma) using ST06-AgNPs, revealed that treatment of the animals with these nanoparticles resulted in a significant reduction in the tumor growth, compared to the control group animals., Conclusion: In conclusion, green synthesized ST06-AgNPs exhibited superior anti-tumor efficacy than the free ST06 or AgNPs with no acute toxicity under both in vitro and in vivo conditions. The tumor suppression is associated with the intrinsic apoptotic pathway. Together, the results of this study suggest that ST06-AgNPs could be considered as a potential option for the treatment of solid tumors., Competing Interests: The authors report no conflicts of interest in this work.
- Published
- 2019
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25. Gut Microbiota-Mediated Bile Acid Transformations Alter the Cellular Response to Multidrug Resistant Transporter Substrates in Vitro: Focus on P-glycoprotein.
- Author
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Enright EF, Govindarajan K, Darrer R, MacSharry J, Joyce SA, and Gahan CGM
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- ATP Binding Cassette Transporter, Subfamily B genetics, ATP Binding Cassette Transporter, Subfamily B metabolism, Biological Variation, Population, Caco-2 Cells, Cell Survival drug effects, Drug Resistance, Multiple physiology, Glycine, HT29 Cells, Humans, Intestinal Mucosa cytology, Intestinal Mucosa metabolism, Intestinal Mucosa microbiology, RNA, Messenger metabolism, Taurine metabolism, Toxicity Tests, Chenodeoxycholic Acid metabolism, Cyclosporine pharmacology, Deoxycholic Acid metabolism, Gastrointestinal Microbiome physiology
- Abstract
Pharmacokinetic research at the host-microbe interface has been primarily directed toward effects on drug metabolism, with fewer investigations considering the absorption process. We previously demonstrated that the transcriptional expression of genes encoding intestinal transporters involved in lipid translocation are altered in germ-free and conventionalized mice possessing distinct bile acid signatures. It was consequently hypothesized that microbial bile acid metabolism, which is the deconjugation and dehydroxylation of the bile acid steroid nucleus by gut bacteria, may impact upon drug transporter expression and/or activity and potentially alter drug disposition. Using a panel of three human intestinal cell lines (Caco-2, T84, and HT-29) that differ in basal transporter expression level, bile acid conjugation-, and hydroxylation-status was shown to influence the transcription of genes encoding several major influx and efflux transporter proteins. We further investigated if these effects on transporter mRNA would translate to altered drug disposition and activity. The results demonstrated that the conjugation and hydroxylation status of the bile acid steroid nucleus can influence the cellular response to multidrug resistance (MDR) substrates, a finding that did not directly correlate with directionality of gene or protein expression. In particular, we noted that the cytotoxicity of cyclosporine A was significantly augmented in the presence of the unconjugated bile acids deoxycholic acid (DCA) and chenodeoxycholic acid (CDCA) in P-gp positive cell lines, as compared to their taurine/glycine-conjugated counterparts, implicating P-gp in the molecular response. Overall this work identifies a novel mechanism by which gut microbial metabolites may influence drug accumulation and suggests a potential role for the microbial bile acid-deconjugating enzyme bile salt hydrolase (BSH) in ameliorating multidrug resistance through the generation of bile acid species with the capacity to access and inhibit P-gp ATPase. The physicochemical property of nonionization is suggested to underpin the preferential ability of unconjugated bile acids to attenuate the efflux of P-gp substrates and to sensitize tumorigenic cells to cytotoxic therapeutics in vitro. This work provides new impetus to investigate whether perturbation of the gut microbiota, and thereby the bile acid component of the intestinal metabolome, could alter drug pharmacokinetics in vivo. These findings may additionally contribute to the development of less toxic P-gp modulators, which could overcome MDR.
- Published
- 2018
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26. Unconjugated Bile Acids Influence Expression of Circadian Genes: A Potential Mechanism for Microbe-Host Crosstalk.
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Govindarajan K, MacSharry J, Casey PG, Shanahan F, Joyce SA, and Gahan CG
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- Animals, Bile Acids and Salts pharmacology, CLOCK Proteins genetics, Cell Line, Tumor, Epithelial Cells, Gastrointestinal Microbiome, Humans, Male, Mice, Models, Biological, Organ Specificity genetics, Bile Acids and Salts metabolism, Circadian Clocks genetics, Gene Expression Regulation drug effects
- Abstract
Disruptions to circadian rhythm in mice and humans have been associated with an increased risk of obesity and metabolic syndrome. The gut microbiota is known to be essential for the maintenance of circadian rhythm in the host suggesting a role for microbe-host interactions in the regulation of the peripheral circadian clock. Previous work suggested a role for gut bacterial bile salt hydrolase (BSH) activity in the regulation of host circadian gene expression. Here we demonstrate that unconjugated bile acids, known to be generated through the BSH activity of the gut microbiota, are potentially chronobiological regulators of host circadian gene expression. We utilised a synchronised Caco-2 epithelial colorectal cell model and demonstrated that unconjugated bile acids, but not the equivalent tauro-conjugated bile salts, enhance the expression levels of genes involved in circadian rhythm. In addition oral administration of mice with unconjugated bile acids significantly altered expression levels of circadian clock genes in the ileum and colon as well as the liver with significant changes to expression of hepatic regulators of circadian rhythm (including Dbp) and associated genes (Per2, Per3 and Cry2). The data demonstrate a potential mechanism for microbe-host crosstalk that significantly impacts upon host circadian gene expression., Competing Interests: The authors have declared that no competing interests exist.
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- 2016
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27. A Novel Selectable Islet 1 Positive Progenitor Cell Reprogrammed to Expandable and Functional Smooth Muscle Cells.
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Turner EC, Huang CL, Sawhney N, Govindarajan K, Clover AJ, Martin K, Browne TC, Whelan D, Kumar AH, Mackrill JJ, Wang S, Schmeckpeper J, Stocca A, Pierce WG, Leblond AL, Cai L, O'Sullivan DM, Buneker CK, Choi J, MacSharry J, Ikeda Y, Russell SJ, and Caplice NM
- Subjects
- Animals, Bone Marrow Cells cytology, Cell Differentiation, Cell Proliferation, Cell Self Renewal, Cell Separation, Cells, Cultured, Clone Cells, Gene Silencing, Genetic Vectors metabolism, Green Fluorescent Proteins metabolism, HEK293 Cells, Humans, Kruppel-Like Factor 4, Kruppel-Like Transcription Factors metabolism, Myocytes, Smooth Muscle metabolism, Nuclear Proteins metabolism, Phenotype, Rats, Inbred F344, Telomerase metabolism, Trans-Activators metabolism, Cellular Reprogramming, LIM-Homeodomain Proteins metabolism, Mesenchymal Stem Cells cytology, Mesenchymal Stem Cells metabolism, Myocytes, Smooth Muscle cytology, Transcription Factors metabolism
- Abstract
Disorders affecting smooth muscle structure/function may require technologies that can generate large scale, differentiated and contractile smooth muscle cells (SMC) suitable for cell therapy. To date no clonal precursor population that provides large numbers of differentiated SMC in culture has been identified in a rodent. Identification of such cells may also enhance insight into progenitor cell fate decisions and the relationship between smooth muscle precursors and disease states that implicate differentiated SMC. In this study, we used classic clonal expansion techniques to identify novel self-renewing Islet 1 (Isl-1) positive primitive progenitor cells (PPC) within rat bone marrow that exhibited canonical stem cell markers and preferential differentiation towards a smooth muscle-like fate. We subsequently used molecular tagging to select Isl-1 positive clonal populations from expanded and de novo marrow cell populations. We refer to these previously undescribed cells as the PPC given its stem cell marker profile, and robust self-renewal capacity. PPC could be directly converted into induced smooth muscle cells (iSMC) using single transcription factor (Kruppel-like factor 4) knockdown or transactivator (myocardin) overexpression in contrast to three control cells (HEK 293, endothelial cells and mesenchymal stem cells) where such induction was not possible. iSMC exhibited immuno- and cytoskeletal-phenotype, calcium signaling profile and contractile responses similar to bona fide SMC. Passaged iSMC could be expanded to a scale sufficient for large scale tissue replacement. PPC and reprogramed iSMC so derived may offer future opportunities to investigate molecular, structure/function and cell-based replacement therapy approaches to diverse cardiovascular, respiratory, gastrointestinal, and genitourinary diseases that have as their basis smooth muscle cell functional aberrancy or numerical loss. Stem Cells 2016;34:1354-1368., (© 2016 AlphaMed Press.)
- Published
- 2016
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28. Identification of a Klf4-dependent upstream repressor region mediating transcriptional regulation of the myocardin gene in human smooth muscle cells.
- Author
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Turner EC, Huang CL, Govindarajan K, and Caplice NM
- Subjects
- Base Sequence, Becaplermin, Cells, Cultured, DNA Primers, Humans, Kruppel-Like Factor 4, Muscle, Smooth, Vascular cytology, Promoter Regions, Genetic, Proto-Oncogene Proteins c-sis pharmacology, RNA, Messenger genetics, Gene Expression Regulation drug effects, Kruppel-Like Transcription Factors metabolism, Muscle, Smooth, Vascular metabolism, Nuclear Proteins genetics, Trans-Activators genetics, Transcription, Genetic
- Abstract
Phenotypic switching of smooth muscle cells (SMCs) plays a central role in the development of vascular diseases such as atherosclerosis and restenosis. However, the factors regulating expression of the human myocardin (Myocd) gene, the master gene regulator of SMC differentiation, have yet to be identified. In this study, we sought to identify the critical factors regulating Myocd expression in human SMCs. Using deletion/genetic reporter analyses, an upstream repressor region (URR) was localised within the Myocd promoter, herein termed PrmM. Bioinformatic analysis revealed three evolutionary conserved Klf4 sites within the URR and disruption of those elements led to substantial increases in PrmM-directed gene expression. Furthermore, ectopic expression established that Klf4 significantly decreased Myocd mRNA levels and PrmM-directed gene expression while electrophoretic mobility shift assays and chromatin immunoprecipitation (ChIP) assays confirmed specific binding of endogenous Klf4, and not Klf5 or Klf2, to the URR of PrmM. Platelet-derived growth factor BB (PDGF-BB), a potent inhibitor of SMC differentiation, reduced Myocd mRNA levels and PrmM-directed gene expression in SMCs. A PDGF-BB-responsive region (PRR) was also identified within PrmM, overlapping with the previously identified URR, where either siRNA knockdown of Klf4 or the combined disruption of the Klf4 elements completely abolished PDGF-BB-mediated repression of PrmM-directed gene expression in SMCs. Moreover, ChIP analysis established that PDGF-BB-induced repression of Myocd gene expression is most likely regulated by enhanced binding of Klf4 and Klf5 to a lesser extent, to the PRR of PrmM. Taken together, these data provide critical insights into the transcriptional regulation of the Myocd gene in vascular SMCs, including during SMC differentiation., (© 2013.)
- Published
- 2013
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29. Subtoxic and toxic concentrations of benzene and toluene induce Nrf2-mediated antioxidative stress response and affect the central carbon metabolism in lung epithelial cells A549.
- Author
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Murugesan K, Baumann S, Wissenbach DK, Kliemt S, Kalkhof S, Otto W, Mögel I, Kohajda T, von Bergen M, and Tomm JM
- Subjects
- Carbon metabolism, Cell Line, Cluster Analysis, Electrophoresis, Gel, Two-Dimensional, Epithelial Cells metabolism, Humans, Lung cytology, Lung metabolism, Proteome analysis, Proteome chemistry, Proteome drug effects, Proteome metabolism, Proteomics, Respiratory Mucosa cytology, Signal Transduction drug effects, Toxicity Tests, Subacute, Benzene toxicity, Epithelial Cells drug effects, Lung drug effects, NF-E2-Related Factor 2 metabolism, Oxidative Stress drug effects, Toluene toxicity
- Abstract
Since people in industrialized countries spend most of their time indoors, the effects of indoor contaminants such as volatile organic compounds become more and more relevant. Benzene and toluene are among the most abundant compounds in the highly heterogeneous group of indoor volatile organic compounds. In order to understand their effects on lung epithelial cells (A549) representing lung's first line of defense, we chose a global proteome and a targeted metabolome approach in order to detect adverse outcome pathways caused by exposure to benzene and toluene. Using a DIGE approach, 93 of 469 detected protein spots were found to be differentially expressed after exposure to benzene, and 79 of these spots were identified by MS. Pathway analysis revealed an enrichment of proteins involved in Nrf2-mediated and oxidative stress response glycolysis/gluconeogenesis. The occurrence of oxidative stress at nonacute toxic concentrations of benzene and toluene was confirmed by the upregulation of the stress related proteins NQO1 and SOD1. The changes in metabolism were validated by ion chromatography MS/MS analysis revealing significant changes of glucose-6-phosphate, fructose-6-phosphate, 3-phosphoglycerate, and NADPH. The molecular alterations identified as a result of benzene and toluene exposure demonstrate the detrimental effect of nonacute toxic concentrations on lung epithelial cells. The data provided here will allow for a targeted validation in in vivo models., (© 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2013
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30. Chlorinated benzenes cause concomitantly oxidative stress and induction of apoptotic markers in lung epithelial cells (A549) at nonacute toxic concentrations.
- Author
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Mörbt N, Tomm J, Feltens R, Mögel I, Kalkhof S, Murugesan K, Wirth H, Vogt C, Binder H, Lehmann I, and von Bergen M
- Subjects
- Biomarkers metabolism, Caspase 3 metabolism, Cell Line, Tumor, Cell Survival drug effects, Dose-Response Relationship, Drug, Electrophoresis, Gel, Two-Dimensional, Flow Cytometry, Humans, Lung cytology, Lung metabolism, Occupational Exposure, Phosphoproteins metabolism, Phosphorylation drug effects, Proteome metabolism, Reactive Oxygen Species metabolism, Respiratory Mucosa cytology, Toxicity Tests, Volatile Organic Compounds toxicity, Apoptosis drug effects, Chlorobenzenes toxicity, Lung drug effects, Oxidative Stress drug effects, Respiratory Mucosa drug effects
- Abstract
In industrialized countries, people spend more time indoors and are therefore increasingly exposed to volatile organic compounds that are emitted at working places and from consumer products, paintings, and furniture, with chlorobenzene (CB) and 1,2-dichlorobenzene (DCB) being representatives of the halogenated arenes. To unravel the molecular effects of low concentrations typical for indoor and occupational exposure, we exposed human lung epithelial cells to CB and DCB and analyzed the effects on the proteome level by 2-D DIGE, where 860 protein spots were detected. A set of 25 and 30 proteins were found to be significantly altered due to exposure to environmentally relevant concentrations of 10(-2) g/m(3) of CB or 10(-3) g/m(3) of DCB (2.2 and 0.17 ppm), respectively. The most enriched pathways were cell death signaling, oxidative stress response, protein quality control, and metabolism. The involvement of oxidative stress was validated by ROS measurement. Among the regulated proteins, 28, for example, voltage-dependent anion-selective channel protein 2, PDCD6IP protein, heat shock protein beta-1, proliferating cell nuclear antigen, nucleophosmin, seryl-tRNA synthetase, prohibitin, and protein arginine N-methyltransferase 1, could be correlated with the molecular pathway of cell death signaling. Caspase 3 activation by cleavage was confirmed for both CB and DCB by immunoblotting. Treatment with CB or DCB also caused differential protein phosphorylation, for example, at the proteins HNRNP C1/C2, serine-threonine receptor associated protein, and transaldolase 1. Compared to previous results, where cells were exposed to styrene, for the chlorinated aromatic substances besides oxidative stress, apoptosis was found as the predominant cellular response mechanism.
- Published
- 2011
- Full Text
- View/download PDF
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