240 results on '"K de Graaf"'
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2. Excessief huilen van een zuigeling, een nieuwe multidisciplinaire (samen)werkwijze
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K. de Graaf, W. Klazema, K. Sprenkelder, L. J. Meijer, and I. de Kruijff
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General Medicine - Published
- 2022
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3. Sweet tooth study: Protocol for a 6-month semi-controlled randomized trial assessing effects of dietary sweetness exposure on sweetness preferences
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E.M. Cad, C.S. Tang, H. de Jong, M. Mars, K.M. Appleton, and K. de Graaf
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Nutrition and Dietetics ,General Psychology - Published
- 2022
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4. Caudal cervical vertebral morphological variation is not associated with clinical signs in Warmblood horses
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Hans Vernooij, A. J. M. Belt, Stefanie Veraa, K. de Graaf, Inge D. Wijnberg, Willem Back, and Mirjam Nielen
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medicine.medical_specialty ,anatomy ,Radiography ,Logistic regression ,Internal medicine ,medicine ,Animals ,MALFORMATIONS ,Horses ,Veterinary Sciences ,Retrospective Studies ,business.industry ,6TH ,Analytical Clinical Studies ,transitional vertebra ,Horse ,General Medicine ,Odds ratio ,Breed ,Confidence interval ,horse ,homologous ,medicine.anatomical_structure ,Warmblood ,Case-Control Studies ,Cervical Vertebrae ,Horse Diseases ,General Article ,business ,Neck ,Cervical vertebrae - Abstract
Summary Background Variation in equine caudal cervical spine morphology at C6 and C7 has high prevalence in Warmblood horses and is suspected to be associated with pain in a large mixed‐breed group of horses. At present no data exist on the relationship between radiographic phenotype and clinical presentation in Warmblood horses in a case‐control study. Objectives To establish the frequency of radiographically visible morphologic variation in a large group of Warmblood horses with clinical signs and compare this with a group without clinical signs. We hypothesised that occurrence of morphologic variation in the case group would not differ from the control group, indicating there is no association between clinical signs and morphologic variation. Study design Retrospective case‐control. Methods Radiographic presence or absence of morphologic variation of cervical vertebrae C6 and C7 was recorded in case (n = 245) and control horses (n = 132). Case and control groups were compared by univariable Pearson’s Chi‐square and multivariable logistic regression for measurement variables age, sex, breed, degenerative joint disease and morphologic variation at C6 and C7. Odds ratio and confidence intervals were obtained. A P≤0.05 was considered statistically significant. Results Morphologic variation at C6 and C7 (n = 108/377 = 28.6%; Cases 58/245 = 23.7%; Control 50/132 = 38%) was less frequent in horses with clinical signs in univariable testing (OR 0.48, 95% CI 0.3–0.8, P = 0.001). Age, sex, breed and degenerative joint disease were not retained in the final multivariable logistic regression step whereas morphologic variation remained significantly less present in horses with clinical signs. Main limitations Possible demographic differences between equine clinics. Conclusions Morphologic variation in the caudal cervical spine was detected more frequently in horses without clinical signs. Therefore, radiographic presence of such variation does not necessarily implicate the presence of clinical signs.
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- 2019
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5. Distraction attenuates goal-directed neural responses for food rewards
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Paul A.M. Smeets, K. De Graaf, Iris Duif, Joost Wegman, and Esther Aarts
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2. Zero hunger ,medicine.medical_specialty ,Food intake ,Right inferior frontal gyrus ,Functional connectivity ,Putamen ,05 social sciences ,education ,Left putamen ,Audiology ,behavioral disciplines and activities ,050105 experimental psychology ,humanities ,03 medical and health sciences ,0302 clinical medicine ,Distraction ,medicine ,0501 psychology and cognitive sciences ,Overeating ,Psychology ,030217 neurology & neurosurgery ,Response inhibition ,psychological phenomena and processes - Abstract
Distracted eating can lead to increased food intake, but it is unclear how. We hypothesized that distraction affects the change in motivated responses for food reward after satiation. To investigate this, 38 healthy normal-weight participants (28F, 10M) performed a detection task varying in attentional load (high or low distraction) during fMRI. Simultaneously, they exerted effort for food rewards (sweet or savory) by repeated button presses. Two fMRI runs were separated by outcome devaluation (satiation) of one of the reward outcomes, to assess outcome-sensitive, i.e. goal-directed, responses. Behavioral results showed no effect of distraction on effort for food reward following outcome devaluation. At an uncorrected threshold (pr = - 0.40, p = 0.014) with the effect of distraction on the number of button presses. Specifically, decreased rIFG responses due to distraction related to increased button presses for food reward after satiation, in line with the rIFG’s established role in response inhibition. Furthermore, distraction decreased functional connectivity between the rIFG (seed) and left putamen for valued versus devalued food rewards (pFWE(cluster)https://osf.io/ad2qk.
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- 2020
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6. Effects of distraction on taste-related neural processing
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K. De Graaf, Esther Aarts, Monica Mars, Iris Duif, Paul A.M. Smeets, and Joost Wegman
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Taste ,medicine.medical_specialty ,education ,Overweight ,Audiology ,Affect (psychology) ,behavioral disciplines and activities ,03 medical and health sciences ,0302 clinical medicine ,food ,Distraction ,medicine ,030304 developmental biology ,2. Zero hunger ,0303 health sciences ,business.industry ,digestive, oral, and skin physiology ,food.food ,Chocolate milk ,Orbitofrontal cortex ,medicine.symptom ,business ,Insula ,Neurocognitive ,030217 neurology & neurosurgery ,psychological phenomena and processes - Abstract
SummaryDistracted eating is associated with increased food intake and overweight. However, the underlying neurocognitive mechanisms are unknown. To elucidate these mechanisms, 41 healthy normal-weight participants received sips of high- and low-sweet isocaloric chocolate milk, while performing a high- or low-distracting detection task during fMRI on two test days. Subsequently, we measured ad libitum food intake. As expected, a region in the primary taste cortex – located in the insula – responded more to the sweeter drink. Distraction did not affect this right insula sweetness response across the group, but did weaken sweetness-related connectivity of this region to a secondary taste region in the right orbitofrontal cortex. Moreover, distraction-related attenuation of taste processing in the insula predicted increased subsequent ad libitum food intake after distraction between subjects. These results reveal a previously unknown mechanism explaining how distraction during consumption attenuates neural taste processing and increases food intake. The study was preregistered at https://osf.io/vxdhg/register/5771ca429ad5a1020de2872e?view_only=e3207cd6567f41f0a1505e343a64b5aa.
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- 2019
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7. The radiographic frequency of impingement of the dorsal spinous processes at purchase examination and its clinical significance in 220 warmblood sporthorses
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K. de Graaf, K. J. Dik, E. Enzerink, A. Smeenk, and P. van Oijen
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Dorsum ,Warmblood ,Equine ,business.industry ,Radiography ,Medicine ,Clinical significance ,Anatomy ,business - Published
- 2015
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8. [A toddler with nightly vomiting and pain in the abdomen]
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K, de Graaf, M R, Ernst-Kruis, and R W B, Bottema
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Male ,Vomiting ,Child, Preschool ,Stomach ,Humans ,Endoscopy ,Foreign Bodies ,Abdominal Pain - Abstract
A 4-year-old boy was referred to the emergency department with four days of nightly vomiting after ingestion of a marble. Abdominal X-ray showed the marble in the antrum of the stomach. The marble was successfully removed by endoscopy. X-rays detect 86% of all glass objects and should therefore be considered as diagnostic option by ingestion of a marble.
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- 2017
9. Evidence of NI-0101 pharmacological activity, an anti-TLR4 antibody, in a randomized phase I dose escalation study in healthy volunteers receiving LPS
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Philippe Jacqmin, C de Min, Emmanuel Monnet, Joannes A. A. Reijers, Matthijs Moerland, Geneviève Lapeyre, J. Burggraaf, K de Graaf, E van Poelgeest, Geriatrics, and APH - Aging & Later Life
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0301 basic medicine ,Adult ,Lipopolysaccharides ,Male ,Genotype ,Metabolic Clearance Rate ,Pharmacology ,Antibodies, Monoclonal, Humanized ,Ligands ,03 medical and health sciences ,0302 clinical medicine ,Pharmacokinetics ,In vivo ,Medicine ,Humans ,Pharmacology (medical) ,PK/PD models ,Dose-Response Relationship, Drug ,business.industry ,Antibodies, Monoclonal ,Healthy Volunteers ,Toll-Like Receptor 4 ,030104 developmental biology ,Tolerability ,030220 oncology & carcinogenesis ,Pharmacodynamics ,Monoclonal ,TLR4 ,Cytokines ,Female ,business ,Ex vivo ,Half-Life ,Signal Transduction - Abstract
Toll-like receptor-4 (TLR4) pathways are major contributors to pathological inflammatory responses induced by tissue damage. NI-0101 is the first monoclonal antibody (mAb) blocking TLR4 signaling. This activity is independent of the ligand type and concentration, therefore, potentially blocking any TLR4 ligands. A phase I single ascending dose study was conducted in 73 healthy volunteers to evaluate NI-0101 tolerability, preliminary safety, pharmacokinetics (PKs), and pharmacodynamics (PDs), in absence and in presence of a systemic challenge with lipopolysaccharide (LPS), a TLR4 ligand. NI-0101 was well tolerated without safety concern. The PK profile was characterized by a half-life of ∼10 days at high concentrations and by a rapid elimination at low concentrations due to expected target-mediated drug disposition. NI-0101 prevented cytokine release following ex vivo and in vivo LPS administration and prevented the C-reactive protein (CRP) increase and the occurrence of flu-like symptoms expected following the in vivo administration of LPS.
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- 2016
10. Oral processing behaviour of consumers differing in age, ethnicity and eating capability
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R.A. de Wijk, K. De Graaf, Eva C. Ketel, Betina Piqueras-Fiszman, E. van der Linden, Markus Stieger, and Monica G. Aguayo-Mendoza
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0301 basic medicine ,03 medical and health sciences ,030109 nutrition & dietetics ,Nutrition and Dietetics ,Ethnic group ,Psychology ,General Psychology ,Developmental psychology - Published
- 2018
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11. Development and initial testing of an instrument to establish eating profiles of clients in nursing homes or elderly homes
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K. De Graaf, J.M. Peeters, Anneke L. Francke, A.P.A. van Beek, R.D. Friele, Peter Spreeuwenberg, and Tranzo, Scientific center for care and wellbeing
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Gerontology ,Male ,Elderly homes ,Medicine (miscellaneous) ,Nursing homes ,Social Environment ,Eating profiles ,Interviews as Topic ,Food Preferences ,Nursing ,Surveys and Questionnaires ,Medicine ,Homes for the Aged ,Humans ,Geriatric Assessment ,Aged ,VLAG ,Consumption (economics) ,Service (business) ,Aged, 80 and over ,Global Nutrition ,Wereldvoeding ,Nutrition and Dietetics ,business.industry ,Questionnaire ,digestive, oral, and skin physiology ,Food Services ,Institutionalization ,Feeding Behavior ,Instrument ,Focus Groups ,Middle Aged ,Food ,Female ,Geriatrics and Gerontology ,Residents' perspective together ,business - Abstract
“Eating profiles” can be defined as types of clients distinguished by combinations of food preferences, consumption patterns, and preferences for ambiance. The purpose of this article is to describe the development and initial testing of an instrument to establish eating profiles of residents of nursing homes or elderly homes. We constructed a 35-item, 4-subscale questionnaire. This self-administered, usable instrument derived five eating profiles from clients' perspectives. Insight in eating profiles is important for facility managers to ascertain that the food, dinner service, and ambiance are adequately tailored to the residents' preferences.
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- 2008
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12. Protection against haemorrhagic septicaemia induced by vaccination of buffalo calves with an improved oil adjuvant vaccine
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Nasir H. Shah, Frits K. de Graaf, and Najmul H. Shah
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Pasteurella multocida ,Buffaloes ,animal diseases ,medicine.medical_treatment ,Pasteurella Infections ,Bacteremia ,Hemorrhage ,Hemorrhagic septicemia ,Biology ,Microbiology ,Immunoglobulin G ,Adjuvants, Immunologic ,Genetics ,medicine ,Animals ,Mineral Oil ,Molecular Biology ,biology.organism_classification ,Antibodies, Bacterial ,Bacterial vaccine ,Vaccination ,Titer ,Bacterial Vaccines ,Immunology ,biology.protein ,Antibody ,Adjuvant - Abstract
An experimental oil adjuvant vaccine was developed against haemorrhagic septicaemia, a disease of cattle and buffalo caused by Pasteurella multocida serotype B and E. Mineral oil, Mercol 52, was used as adjuvant together with Span 85 and Tween 85 as emulsifiers. The vaccine was evaluated by single dose intramuscular immunisation of 1-2 year old buffalo calves. IgG and IgM class antibodies were determined by ELISA. The group of animals immunised with the experimental oil adjuvant vaccine showed a high titre of the IgG class of antibodies measured at 300 days post vaccination. To compare the protective efficacy of the vaccine with the commonly used broth bacterin, another group of buffalo calves was immunised by broth bacterin. This group showed a low level of IgG antibodies. Protection was assessed by challenge with 10(9) viable bacteria of P. multocida type B:2,5 administered subcutaneously, 250 days post vaccination. Animals vaccinated with the experimental oil adjuvant vaccine were fully protected. The other groups of animals, vaccinated with broth bacterin or used as control (non-vaccinated), developed symptoms of haemorrhagic septicaemia. A strong relationship between IgG but not IgM class antibody level and resistance to challenge was observed. The experiment demonstrated that the experimental oil adjuvant vaccine was superior to broth bacterin in providing protection against experimental haemorrhagic septicaemia in young buffalo calves beyond 250 days.
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- 2006
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13. Role of the imide axial ligand in the spin and oxidation state of Mn corrole and corrolazine complexes
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Química Quàntica, Química Física i Inorgànica, Universitat Rovira i Virgili, Caballol, R. ; Alcover-Fortuny, G. ; Pierloot, K. ; De Graaf, C., Química Quàntica, Química Física i Inorgànica, Universitat Rovira i Virgili, and Caballol, R. ; Alcover-Fortuny, G. ; Pierloot, K. ; De Graaf, C.
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Filiació URV: SI, Electronic structure calculations have been performed on four dierent Mn corrole and corrolazine complexes to clarify the role of the imide axial ligand on the relative stability of the dierent spin states and the stabilization of the high valent Mn ion in these complexes. Multicongurational perturbation theory energy calculations on the DFT optimized geometries shows that all complexes have a singlet ground state except the complex with the strongest electron with- drawal axial ligand, which is found to have a triplet ground state. The analysis of the sigma and pi interaction between metal and imide ligand shows that this spin crossover is caused by a subtle interplay of geometrical factors (Mn-N distance and coordination angle) and the electron withdrawal character of the imide. The analysis of the multicongurational wave functions reveals that the formally MnV ion is stabilized by an important electron transfer from both the equatorial cor-role/corrolazine ligand and the axial imide. The macrocycle donates roughly half an electron, being somewhere between the closed-shell trianionic and the dian-ionic radical form. The imide ligand transfers 2.5 electrons to the metal center, resulting in an eective d-electron count close to ve in all complexes.
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- 2016
14. Vacuolating cytotoxic activity ofPasteurella multocidacausing haemorrhagic septicaemia in buffalo and cattle
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Najmul H. Shah, Frits K. de Graaf, Nasir H. Shah, and J. Biewenga
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Serotype ,Pasteurella multocida ,Buffaloes ,animal diseases ,Phagocytosis ,Bacterial Toxins ,Cattle Diseases ,Hemorrhagic septicemia ,Microbiology ,Mice ,otorhinolaryngologic diseases ,Genetics ,Animals ,Cytotoxic T cell ,Hemorrhagic Septicemia ,Molecular Biology ,Antiserum ,Mice, Inbred BALB C ,Virulence ,biology ,Cytotoxins ,Macrophages ,Pasteurellaceae ,biology.organism_classification ,Disease Models, Animal ,Microscopy, Electron ,Vacuoles ,Cattle ,Cytoplasmic Vacuolation - Abstract
The toxic activity of Pasteurella multocida strains which cause haemorrhagic septicaemia (HS) in buffalo and cattle was examined in a mouse model. Mice were injected intraperitoneally with 10(2) cells of P. multocida serotype B:2,5. Electron microscopy of peritoneal macrophages obtained 6 h after injection revealed strong induction of cytoplasmic vacuolation, macrophage lysis and death. In vitro experiments with the mouse macrophage cell line RAW 264 incubated with cultures of various HS- and non-HS-associated strains of P. multocida or with culture supernatants revealed macrophage vacuolation when HS-associated strains were used. On pre-incubation of the strains with antiserum obtained from buffalo infected with P. multocida serotype B:2,5 no vacuolation was observed. These results are indicative of the presence of vacuolating cytotoxic activity in HS-associated strains of P. multocida.
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- 1996
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15. Isolation and characterization of chromosomal mTn10insertion mutations affecting K88 fimbriae production inEscherichia coli
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Bauke Oudega, F Remkes, E Pilipcinec, T T Huisman, J.J. Maaskant, and F K de Graaf
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Lipopolysaccharides ,animal diseases ,Bacterial Toxins ,Molecular Sequence Data ,Fimbria ,Mutant ,Mutagenesis (molecular biology technique) ,Biology ,Microbiology ,Fimbriae Proteins ,Bacterial Proteins ,Chromosomal Insertion ,Escherichia coli ,Leucine-responsive regulatory protein ,Amino Acid Sequence ,Insertion ,Genetics ,Antigens, Bacterial ,Base Sequence ,Escherichia coli Proteins ,Chromosome Mapping ,biochemical phenomena, metabolism, and nutrition ,Leucine-Responsive Regulatory Protein ,Molecular biology ,DNA-Binding Proteins ,Mutagenesis, Insertional ,Infectious Diseases ,Fimbriae, Bacterial ,Antigens, Surface ,DNA Transposable Elements ,biology.protein ,bacteria ,Transposon mutagenesis ,Transcription Factors - Abstract
mTn 10 transposon mutagenesis of Escherichia coli producing K88 fimbria was carried out in order to identify host factors involved in the regulation of the fae (K88) operon and the production of K88 fimbriae. Five independent chromosomal insertion mutants were obtained which showed an increased expression of K88 fimbriae. Inverse PCR and nucleotide sequencing were carried out to characterize the mutations. One insertion affected the Ipp gene, encoding the major outer membrane lipoprotein. Another mutation was found to be located in the Irp gene, encoding the 'global' regulatory protein Lrp (leucine responsive regulatory protein). A third mutant was found to affect the expression of rfaF, encoding heptosyltransferase II, which resulted in a partially wild-type and partially Re-Rd1 type of LPS. A fourth mutation affected sseB, a gene involved in serine-sensitivity of E. coli cells. Another mutant contained an insertion in an unknown region of the E. coli genome. The mutants were further characterized with respect to K88 as well as K99 fimbriae production.
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- 1996
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16. Negative control of fae (K88) expression by the'global'regulator Lrp is modulated by the'local'regulator FaeA and affected by DNA methylation
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Frits K. de Graaf and T T Huisman
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DNA, Bacterial ,Operon ,Molecular Sequence Data ,Restriction Mapping ,Population ,DNA, Single-Stranded ,Biology ,Methylation ,Polymerase Chain Reaction ,Microbiology ,chemistry.chemical_compound ,Plasmid ,Bacterial Proteins ,Transcription (biology) ,Deoxyribonuclease I ,Promoter Regions, Genetic ,education ,Molecular Biology ,DNA Primers ,education.field_of_study ,Binding Sites ,Base Sequence ,Escherichia coli Proteins ,Promoter ,Gene Expression Regulation, Bacterial ,Leucine-Responsive Regulatory Protein ,Molecular biology ,DNA-Binding Proteins ,chemistry ,Genes, Bacterial ,DNA methylation ,DNA Transposable Elements ,Mutagenesis, Site-Directed ,Nucleic Acid Conformation ,DNA ,Plasmids ,Transcription Factors - Abstract
Summary Expression of the K88 (fae) operon is negatively controlled by the co-operative binding of Lrp and FaeA to the fae regulatory region and is dependent on the methylation status of three GATC sites present in this region. In this paper, we describe the binding of Lrp to a T-rich DNA helix between GATC site I and site II. FaeA stabilized and modified the Lrp binding, thereby extending the Lrp footprint over GATC site I and site III. Methylation of GATC site I prevented the binding of Lrp/FaeA at this site and appeared to be essential for the cells, since mutation of this site into GTTC resulted in a lethal overproduction of K88 fimbriae. Methylation of GATC site II and site III reduced the stability of Lrp/FaeA binding. Moreover, methylation of GATC site III stimulated faeB promoter activity. The plasmid population in cells harbouring multiple copies of a K88 plasmid consisted of two differentially methylated forms. Form A plasmids with a methylated GATC site I and site III and a non-methylated site II (+,-,+) represented 20% of the population and were responsible for high-level expression. Form B plasmids with a methylated GATC site I and a non-methylated site II and site III (+,-,-) represented 80% of the population and were responsible for low-level expression. Apparently, K88 fimbriae expression in vivo is balanced at its maximal possible level by modulation of the methylation status of GATC site III. The ratio (1:4) between these populations is stabilized by a constitutive synthesis of FaeA resulting from the presence of an IS1 insertion upstream of faeA. This IS1 insertion separates the faeA promoter from the FaeB-binding sites, thereby neutralizing the control by FaeB activity on expression of FaeA. Instead, faeA transcription is stimulated by binding of FaeA to the faeA promoter region.
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- 1995
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17. Subcellular localization and topology of the K88 usher FaeD in Escherichia coli
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Frits K. de Graaf, Quido A. Valent, Jelle Zaal, and Bauke Oudega
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Signal peptide ,Recombinant Fusion Proteins ,Detergents ,Immunoblotting ,Molecular Sequence Data ,Gene Expression ,Biology ,Microbiology ,Endopeptidases ,Centrifugation, Density Gradient ,Escherichia coli ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Antigens, Bacterial ,Base Sequence ,Edman degradation ,Escherichia coli Proteins ,Cell Membrane ,Periplasmic space ,Proteinase K ,Subcellular localization ,Fusion protein ,Molecular biology ,Biochemistry ,Membrane topology ,Antigens, Surface ,biology.protein ,Fimbriae Proteins ,Bacterial outer membrane ,Sequence Analysis ,Bacterial Outer Membrane Proteins - Abstract
Summary The subcellular localization of the K88 usher FaeD was studied in Escherichia coli whole ceils by using iso-pycnic sucrose density gradient centrifugation of isolated membranes, the detergents Triton X-100 and sodium lauryl sarcosinate and immunoblotting with a specific FaeD antiserum. Cells containing the complete K88 operon, as well as cells containing the sub-cloned faeD gene in various expression vectors, were used. Most of the FaeD was present in the outer membranes in a detergent-resistant form. Agglutination experiments with E coli cells expressing FaeD confirmed an outer membrane localization and indicated the presence of FaeD at the cell surface. Automated Edman degradation indicated that the mature FaeD contained 777 amino acid residues and confirmed that FaeD is synthesized with a rather long signal sequence of 35 amino acid residues. Twelve different FaeD–PhoA fusion proteins were prepared and characterized by nucleotide sequencing and immuno-blotting. Most of these fusion sites were located in the amino-terminal and carboxyl-terminal regions of FaeD. Six amino-terminal fusion proteins were soluble proteins in the peripiasm, whereas the other fusion proteins were associated with the outer membrane. The protease accessibility of FaeD and of the six outer membrane-bound FaeD–PhoA fusion proteins was studied using whole cells, cells with permeabilized outer membranes, and isolated membranes. Collagenase H, kallikrein, trypsin and proteinase K were used. Based on the results of these experiments and computer predictions, a model for the membrane topology of FaeD was developed in which FaeD contains a large central domain containing 24 membrane-spanning segments and two relatively large periplasmic regions, at the amino-terminal and carboxyl-terminal end of the protein, respectively.
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- 1995
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18. The Escherichia coli K88 periplasmic chaperone FaeE forms a heterotrimeric complex with the minor fimbrial component FaeH and with the minor fimbrial component Fael
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Olaf Mol, Bauke Oudega, Ron P.C. Oud, and Frits K. de Graaf
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Protein Conformation ,Protein subunit ,Blotting, Western ,Molecular Sequence Data ,Restriction Mapping ,Biology ,medicine.disease_cause ,Microbiology ,Protein structure ,Bacterial Proteins ,Heterotrimeric G protein ,Escherichia coli ,medicine ,Amino Acid Sequence ,Cloning, Molecular ,Antigens, Bacterial ,Sequence Homology, Amino Acid ,Edman degradation ,Isoelectric focusing ,Escherichia coli Proteins ,Fast protein liquid chromatography ,Periplasmic space ,Molecular biology ,Infectious Diseases ,Biochemistry ,Multigene Family ,Antigens, Surface ,bacteria ,Electrophoresis, Polyacrylamide Gel ,Fimbriae Proteins ,Isoelectric Focusing ,Molecular Chaperones - Abstract
K88ab fimbriae are long polymeric protein structures mainly composed of FaeG proteins. The Escherichia coli K88 periplasmic chaperone FaeE is a homodimer and forms a heterotrimeric complex with the K88 major fimbrial component FaeG in the periplasm. In this study the direct interaction of FaeE and the minor K88 fimbrial subunits FaeH and Fael were investigated. The faeH gene and the fael gene were subcloned in a plNIIIA1-derivative vector containing the faeE gene. SDS-PAGE using normal and gradient gels and immunoblotting revealed that the subcloned genes were expressed in the periplasm. Analyses of periplasmic fractions by native gel electrophoresis and isoelectric focusing (IEF) showed that FaeE and FaeH, as well as FaeE and Fael formed protein complexes. These complexes were isolated and purified by FPLC or IEF and native gel electrophoresis. The stoichiometry of the proteins in these complexes was studied by automated Edman degradation and gel image analysis. The results showed that FaeE and FaeH, and FaeE and Fael formed heterotrimeric E 2 H and E 2 I complexes, respectively. In addition to the E 2 H complex, cells expressing FaeE and FaeH accumulated unbound FaeH in their periplasm. In contrast to the E 2 G complex, the purified E 2 H complex was not stable and was partly dissociated in the experimental conditions used, suggesting that the interaction between FaeE and FaeH is not as strong as the interaction of FaeE and FaeG.
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- 1995
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19. Identification by Tn10 transposon mutagenesis of host factors involved in the biosynthesis of K99 fimbriae of Escherichia coli: Effect of LPS core mutations
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E, Pilipcinec, T T, Huisman, P T, Willemsen, B J, Appelmelk, F K, de Graaf, and B, Oudega
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Lipopolysaccharides ,Base Sequence ,Immunoblotting ,Molecular Sequence Data ,Antibodies, Monoclonal ,Gene Expression Regulation, Bacterial ,Polymerase Chain Reaction ,Microbiology ,Mutagenesis, Insertional ,Bacterial Proteins ,Escherichia coli ,Genetics ,Fimbriae Proteins ,DNA Probes ,Molecular Biology - Abstract
Tn10 transposon mutagenesis of Escherichia coli producing K99 fimbriae was carried out to identify host factors involved in regulation of biosynthesis of fimbriae. Two chromosomal mutants were obtained that showed a strongly reduced cell surface expression of K99 fimbriae upon colony blotting and ELISA. Analysis by inversed PCR and nucleotide sequencing showed that one mutant (EP14) contained the Tn10 transposon in rfaQ, affecting the expression of the rfaQGP gene cluster, whereas the other mutant (EP35) was affected in a, to date, unknown region of the genome. Immunoblotting analysis confirmed a Rd1 type of LPS of mutant strain EP14. These findings for the first time indicated an effect of LPS core biosynthesis on the biogenesis of fimbriae at the cell surface. Preliminary experiments indicated that K99 major subunits, in contrast to K88 subunits, strongly bind LPS molecules.
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- 1994
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20. Identification by Tn10transposon mutagenesis of host factors involved in the biosynthesis of K99 fimbriae ofEscherichia coli: Effect of LPS core mutations
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Ben J. Appelmelk, T T Huisman, Emil Pilipcinec, P. T. J. Willemsen, Bauke Oudega, and Frits K. de Graaf
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Transposable element ,biology ,animal diseases ,Mutant ,Fimbria ,Mutagenesis (molecular biology technique) ,biology.organism_classification ,medicine.disease_cause ,Microbiology ,Enterobacteriaceae ,Molecular biology ,Fimbriae Proteins ,Genetics ,medicine ,bacteria ,Transposon mutagenesis ,Molecular Biology ,Escherichia coli - Abstract
Tn 10 transposon mutagenesis of Escherichia coli producing K99 fimbriae was carried out to identify host factors involved in regulation or biosynthesis of fimbriae. Two chromosomal mutants were obtained that showed a strongly reduced cell surface expression of K99 fimbriae upon colony blotting and ELISA. Analysis by inversed PCR and nucleotide sequencing showed that one mutant (EP14) contained the Tn 10 transposon in rfaQ, affecting theexpression of the rfaQGP gene cluster, whereas the other mutant (EP35) was affected in a, to date, unknown region of the genome. Immunoblotting analysis confirmed a Rd1 type of LPS of mutant strain EP14. These findings for the first time indicated an effect of LPS core biosynthesis on the biogenesis of fimbriae at the cell surface. Preliminary experiments indicated that K99 major subunits, in contrast to K88 subunits, strongly bind LPS molecules.
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- 1994
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21. Characterization of Gangliosides of Epithelial Cells of Calf Small Intestine, with Special Reference to Receptor-Active Sequences for Enteropathogenic Escherichia coli K991
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Gunnar Stenhagen, Jonas Ångström, Karl-Anders Karlsson, P. T. J. Willemsen, Susann Teneberg, Per-Åke Jovall, Frits K. de Graaf, and Weston Pimlott
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Alpha (ethology) ,General Medicine ,Biology ,medicine.disease_cause ,Biochemistry ,Epitope ,Small intestine ,carbohydrates (lipids) ,chemistry.chemical_compound ,Glycolipid ,medicine.anatomical_structure ,chemistry ,N-Glycolylneuraminic acid ,medicine ,lipids (amino acids, peptides, and proteins) ,Enteropathogenic Escherichia coli ,Beta (finance) ,Molecular Biology ,Escherichia coli - Abstract
Glycolipids were prepared from epithelial cells of the small intestine of a newborn calf and assayed for Escherichia coli K99 binding activity on thin-layer chromatograms and in microtiter wells. The bacteria did not bind to any of the non-acid glycolipids, while in the acid fraction several binding-positive glycolipids were detected. The acid glycolipids were isolated and characterized by mass spectrometry, proton NMR spectroscopy and other methods. The following gangliosides were identified, mainly from the epithelial cells from the upper part of the small intestine: NeuAc alpha 2-3Gal beta 1-4Glc beta 1-Cer (NeuAc-GM3), NeuGc alpha 2-3Gal beta 1-4Glc beta 1-Cer (NeuGc-GM3), GalNAc beta 1-4(NeuGc alpha 2-3)Gal beta 1-4Glc beta 1-Cer (NeuGc-GM2), Gal beta 1-3GalNAc beta 1-4(NeuGc alpha 2-3)Gal beta 1-4Glc beta 1-Cer (NeuGc-GM1), and NeuGc alpha 2-3Gal beta 1-3GalNAc beta 1-4(NeuGc alpha 2-3)Gal beta 1-4Glc beta 1-Cer (NeuGc-GD1a). A positive binding was demonstrated to NeuGc-GM3, NeuGc-GM2, and NeuGc-GD1a, while NeuAc-GM3 and NeuGc-GM1 were negative. The binding pattern differed somewhat for total acid glycolipids of epithelial cells from three different parts of the small intestine. Based on binding preferences of E. coli K99 to a number of glycolipids of various origins, in comparison with calculated minimum energy conformations, a binding epitope was delineated.
- Published
- 1994
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22. Utilization of haem from the haptoglobin-haemoglobin complex by Bacteroides fragilis
- Author
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D. M. Maclaren, Marion Sparrius, Ben R. Otto, F K de Graaf, and D.J. Wors
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Hemeproteins ,Hemeprotein ,Heme ,Biology ,Microbiology ,Chromatography, Affinity ,Bacteroides fragilis ,Heme-Binding Proteins ,Hemoglobins ,chemistry.chemical_compound ,polycyclic compounds ,Polyacrylamide gel electrophoresis ,Bacteroidaceae ,Haptoglobins ,Binding protein ,digestive, oral, and skin physiology ,Congo Red ,biology.organism_classification ,Molecular Weight ,Infectious Diseases ,chemistry ,Biochemistry ,Electrophoresis, Polyacrylamide Gel ,Hemoglobin ,Carrier Proteins ,Peptides ,Bacteria - Abstract
Possession of specialized iron acquisition systems is a prerequisite for the survival of pathogenic bacteria in their host. The purpose of this study was to determine whether Bacteroides fragilis, a clinically important Gram-negative anaerobic bacterium, possesses a specific haem-uptake system. Growth studies indicated that this microorganism can utilize haem from either haemoglobin or haptoglobin-haemoglobin as its sole source of iron. Iron-repressible haem-binding protein complexes (HBP complexes), involved in the uptake of haem from haptoglobin-haemoglobin were detected by means of lithium dodecyl sulfate polyacrylamide gel electrophoresis (LDS-PAGE). Four polypeptides of approximately 60, 58, 49 and 35 kDa, which are part of these HBP complexes, were identified as haem-binding proteins. A 44 kDa iron-repressible outer-membrane protein is needed for a functional HBP complex, but the exact role of this protein in the uptake of haem is still unknown.
- Published
- 1994
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23. Identification of F11 fimbriae on chicken Escherichia coli strains
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J. H. I. M. Hendriks, F K de Graaf, J. F. van den Bosch, I. Gladigau, H. M. C. Willems, and P. K. Storm
- Subjects
Serotype ,Antigenicity ,animal structures ,Blotting, Western ,Immunology ,Fimbria ,Cross Reactions ,Biology ,medicine.disease_cause ,Microbiology ,Bacterial Adhesion ,Epithelium ,Pilus ,Escherichia coli ,medicine ,Animals ,Escherichia coli Infections ,Poultry Diseases ,Molecular mass ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Enterobacteriaceae ,Molecular Weight ,Infectious Diseases ,Fimbriae, Bacterial ,bacteria ,Parasitology ,Chickens ,Bacteria ,Research Article - Abstract
Fimbriae were purified from Escherichia coli strains isolated from chickens with septicemia or colibacillosis. When grown on solid media, these strains expressed fimbriae with an apparent subunit molecular mass of 18 kDa. Morphological, biochemical, serological, functional, and molecular characterization revealed that these 18-kDa fimbriae are identical to F11 fimbriae, which were previously found to be involved in the pathogenesis of human urinary tract infection. Screening of a large strain collection showed that 78% of chicken E. coli strains expressed F11 fimbriae, whereas this percentage increased to 96% when the only strains taken into account were those with the serotypes most commonly encountered in avian colibacillosis (O1:K1, O2:K1, O35, and O78:K80). The prevalence of F11 fimbrial expression appeared to be independent of the country of isolation of the strains, except for the United States, where the prevalence seemed higher. Expression of F11 fimbriae by chicken E. coli strains could not be correlated with adherence to chicken tracheal or pharyngeal cells.
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- 1993
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24. Gastrointestinal targets of appetite regulation in humans
- Author
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Anne Lluch, Fred Brouns, John E. Blundell, Nathalie M. Delzenne, Margriet S. Westerterp-Plantenga, Monica Mars, H. P. F. Peters, Karen Cunningham, K. De Graaf, Alfrun Erkner, Humane Biologie, and RS: NUTRIM - R1 - Metabolic Syndrome
- Subjects
medicine.medical_specialty ,Endocrinology, Diabetes and Metabolism ,media_common.quotation_subject ,Peptide Hormones ,Appetite ,Bioinformatics ,high-carbohydrate meal ,plasma ghrelin levels ,Gastrointestinal Hormones ,Internal medicine ,increases food-intake ,gastrointestinal peptide ,medicine ,Humans ,gastric-emptying rate ,cholecystokinin receptor antagonist ,Sensory Science and Eating Behaviour ,acid breath test ,media_common ,Cholecystokinin ,VLAG ,Human studies ,Gastric emptying ,business.industry ,Appetite Regulation ,Public Health, Environmental and Occupational Health ,aqueous meal components ,libitum energy-intake ,Gastrointestinal Tract ,Endocrinology ,Sensoriek en eetgedrag ,glucagon-like peptide-1 ,Potential biomarkers ,biomarker ,Biomarker (medicine) ,Ghrelin ,gastric distension ,business ,Energy Metabolism ,Appetite regulation ,Biomarkers ,c-terminal octapeptide - Abstract
The aim of this paper is to describe and discuss relevant aspects of the assessment of physiological functions - and related biomarkers - implicated in the regulation of appetite in humans. A short introduction provides the background and the present state of biomarker research as related to satiety and appetite. The main focus of the paper is on the gastrointestinal tract and its functions and biomarkers related to appetite for which sufficient data are available in human studies. The first section describes how gastric emptying, stomach distension and gut motility influence appetite; the second part describes how selected gastrointestinal peptides are involved in the control of satiety and appetite (ghrelin, cholecystokinin, glucagon-like peptide, peptide tyrosin-tyrosin) and can be used as potential biomarkers. For both sections, methodological aspects (adequacy, accuracy and limitation of the methods) are described. The last section focuses on new developments in techniques and methods for the assessment of physiological targets involved in appetite regulation (including brain imaging, interesting new experimental approaches, targets and markers). The conclusion estimates the relevance of selected biomarkers as representative markers of appetite regulation, in view of the current state of the art.
- Published
- 2010
25. The stable BRP signal peptide causes lethality but is unable to provoke the translocation of cloacin DF13 across the cytoplasmic membrane of Escherichia coli
- Author
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Fimme J. van der Wal, Joen Luirink, Frits K. de Graaf, Martin M. Kater, C. M. Hagen‐Jongman, and Bauke Oudega
- Subjects
DNA, Bacterial ,Signal peptide ,Molecular Sequence Data ,Protein Sorting Signals ,Biology ,medicine.disease_cause ,Microbiology ,beta-Lactamases ,Bacterial Proteins ,Bacteriocins ,Escherichia coli ,medicine ,Secretion ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Base Sequence ,Escherichia coli Proteins ,Biological Transport ,Periplasmic space ,Biochemistry ,Cytoplasm ,Electrophoresis, Polyacrylamide Gel ,Cell envelope ,Cell fractionation ,Bacterial outer membrane ,Protein Processing, Post-Translational ,Plasmids - Abstract
Summary The bacteriocin release protein (BRP) mediates the secretion of cloacin DF13. The BRP precursor is slowly processed to yield the mature BRP and its stable signal peptide which is also involved in cloacin DF13 secretion. The function of the stable BRP signal peptide was analysed by constructing two plasmids. First, the stable BRP signal peptide was fused to the murein lipoprotein and, second, a stop codon was introduced after the BRP signal sequence. Exchange of the unstable murein lipoprotein signal peptide for the stable BRP signal peptide resulted in an accumulation of precursors of the hybrid murein lipoprotein. This indicated that the BRP signal peptide, as part of this hybrid precursor, is responsible for the slow processing. The stable BRP signal peptide itself was not able to direct the transfer of cloacin DF13 into the periplasmic space or into the culture medium. Over-expression of the BRP signal peptide was lethal and caused ‘lysis’. Subcellular fractionation experiments revealed that the BRP signal peptide is located exclusively in the cytoplasmic membrane whereas the mature BRP, targeted by either the stable BRP signal peptide or the unstable Lpp signal peptide, is located in both the cytoplasmic and outer membrane. These results are in agreement with the hypothesis that the stable signal peptide and the mature BRP together are required for the passage of cloacin DF13 across the cell envelope.
- Published
- 1992
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26. Leucine-responsive regulatory protein controls the expression of both the pap and fan pili operons in Escherichia coli
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David A. Low, F K de Graaf, Bert Simons, J V Platko, Bruce A. Braaten, J M Calvo, and M W van der Woude
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DNA, Bacterial ,Transcription, Genetic ,Operon ,Molecular Sequence Data ,Restriction Mapping ,Bacterial Proteins ,Leucine ,Transcription (biology) ,Genes, Regulator ,Escherichia coli ,Leucine-responsive regulatory protein ,Amino Acid Sequence ,RNA, Messenger ,Gene ,Regulator gene ,Regulation of gene expression ,Multidisciplinary ,Base Sequence ,biology ,Escherichia coli Proteins ,Promoter ,Gene Expression Regulation, Bacterial ,Leucine-Responsive Regulatory Protein ,Molecular biology ,DNA-Binding Proteins ,Oligodeoxyribonucleotides ,Genes, Bacterial ,Mutagenesis ,Fimbriae, Bacterial ,DNA methylation ,biology.protein ,lipids (amino acids, peptides, and proteins) ,Research Article ,Transcription Factors - Abstract
The methylation blocking factor gene (mbf) in Escherichia coli is required for specific methylation inhibition of two DNA GATC sites upstream of the papBA pilin promoter and transcriptional activation of pap. Complementation and mutational analysis using pap-lac and ilvIH-lac operon fusions indicates that the mbf gene is identical to a recently described global regulatory gene lrp (leucine-responsive regulatory protein) that acts as a positive regulator of some genes and a negative regulator of others in E. coli. DNA sequence analysis of an mbf::mTn10 insertion showed that the mbfDNA sequence was identical to lrp. Thus Lrp inhibits DNA methylation at specific GATC sites. We also show that Lrp positively regulates transcription of the fan operon, which encodes K99 pili of diarrheagenic E. coli. Purified Lrp was found to bind to DNA fragments encompassing the pap and fan promoters, which is consistent with previous results indicating that Lrp controls gene expression by binding to regulatory DNA sites. Exogenous leucine significantly reduced fan transcription and K99 pili expression, similar to results obtained with the ilvIH operon. However, pap gene expression was unresponsive to leucine, which distinguishes pap from other lrp-regulated genes whose expression is modulated by leucine.
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- 1992
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27. Age and serotype dependent binding of K88 fimbriae to porcine intestinal receptors
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P. T. J. Willemsen and F K de Graaf
- Subjects
Aging ,Glycoside Hydrolases ,Brush border ,Swine ,animal diseases ,Immunoblotting ,Fimbria ,medicine.disease_cause ,digestive system ,Microbiology ,Bacterial Adhesion ,Escherichia coli ,medicine ,Animals ,Intestinal Mucosa ,Receptor ,Binding Sites ,Microvilli ,biology ,Molecular mass ,Proteins ,Lectin ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Enterobacteriaceae ,Mucus ,Infectious Diseases ,Biochemistry ,Fimbriae, Bacterial ,biology.protein ,bacteria ,Protein Binding - Abstract
The porcine small intestine contains several polypeptides that could function as receptors for K88-positive Escherichia coli. The mucus fraction contained three proteins with molecular weights of 25, 35 and 60 kDa respectively, which showed a high affinity for K88-positive E. coli cells, whereas brush borders contained a 16 kDa protein and a set of proteins ranging from 40-70 kDa. Depending on the K88 serotype tested, differences in binding to these proteins were observed. In particular, E. coli cells carrying K88ad fimbriae exhibited only a rather weak binding to mucus proteins. The influence of age of the pig on the presence of K88 receptors was also investigated. One-week-old and 35-days-old post-weaning piglets were shown to contain K88 receptors in their mucus while these receptors were hardly detectable in the mucus of 6-month-old pigs. The presence of receptors in the brush border fraction was shown to be independent of age. The binding of K88 fimbriae to mucus proteins was blocked using a lectin of Euonymus europeaus which specifically recognizes the Gal alpha(1-3)Gal sequence, indicating that this disaccharide forms a significant part of the receptor structure.
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- 1992
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28. Characterization of the antigenic and adhesive properties of FaeG, the major subunit of K88 fimbriae
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F K de Graaf, F. G. van Zijderveld, D. Bakker, L. H. Simons, and P. T. J. Willemsen
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Antigenicity ,Protein subunit ,Molecular Sequence Data ,Fimbria ,Mutagenesis (molecular biology technique) ,Biology ,Microbiology ,Pilus ,Epitope ,Fimbriae Proteins ,Epitopes ,Escherichia coli ,Amino Acid Sequence ,Molecular Biology ,Peptide sequence ,Antigens, Bacterial ,Base Sequence ,Escherichia coli Proteins ,Hemagglutination ,Antibodies, Monoclonal ,Molecular biology ,Biochemistry ,Fimbriae, Bacterial ,Antigens, Surface ,Mutation - Abstract
The two K88 serotypes, K88ab and K88ac, differ in terms of antigenic and adhesive properties. The structural determinants of the serotype-specific epitopes and the identify of the amino acid residues involved in fimbriae-receptor interaction were studied by the construction and analysis of K88 hybrid proteins in which various parts of the K88ab and K88ac fimbrial subunit FaeG were exchanged, and by in vitro mutagenesis of non-conserved amino acid residues. Using a set of monoclonal antibodies, several regions or amino acid residues involved in the formation of serotype-specific antigenic determinants were located. The haemagglutinating activity of the hybrid and mutant proteins revealed several amino acid residues involved in the formation of the receptor binding site. A clear correlation was found between the receptor binding site and the serotype-specific antigenic determinants.
- Published
- 1992
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29. Localization and function of FanH and FanG, minor components of K99 fimbriae of enterotoxigenic Escherichia coli
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F K de Graaf, D. Bakker, L. H. Simons, Bauke Oudega, and P. T. J. Willemsen
- Subjects
Hemagglutination ,Recombinant Fusion Proteins ,animal diseases ,Fimbria ,Biology ,medicine.disease_cause ,Models, Biological ,Microbiology ,Bacterial Adhesion ,Glycolipid ,Bacterial Proteins ,Enterotoxigenic Escherichia coli ,Escherichia coli ,medicine ,Antiserum ,Adhesins, Escherichia coli ,Escherichia coli Proteins ,biology.organism_classification ,Enterobacteriaceae ,Molecular biology ,Bacterial adhesin ,Microscopy, Electron ,Infectious Diseases ,Fimbriae, Bacterial ,Antigens, Surface ,Mutation ,biology.protein ,Fimbriae Proteins ,Antibody ,Bacterial Outer Membrane Proteins - Abstract
Specific antisera against FanG and against FanH were prepared by immunization with hybrid Cro-LacZ-FanG and Cro-LacZ-FanH proteins, respectively. Immunoblotting with these antisera revealed the presence of FanG and FanH as minor components in purified K99 fimbriae. Mutations were constructed in fanG and fanH and cells defective in FanG or FanH were characterized by ELISA, immunoblotting, adhesion assays and electron microscopy. A minicell experiment showed that the mutations in fanG or fanH had no effect on the expression of the other K99-specific proteins. Cells defective in FanG produced no fimbriae and did not agglutinate horse erythrocytes, but cell-free heat-shock preparations of these cells still bound the K99 glycolipid receptor. Cells defective in FanH produced 1–2% of the K99 fimbriae as compared with wild-type K99 producing cells. These mutant fimbriae appeared to be shorter but were still capable of binding the K99 glycolipid receptor. Apparently, FanG and FanH are not required for binding the K99 receptor. These results and analysis of K99 mutants by immunoblotting using a specific antiserum against another K99 minor component, FanF, indicated that the combinations FanF FanG and FanF FanH are required for the initiation and elongation (length determination) of K99 fimbriae formation, respectively.
- Published
- 1991
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30. Enzyme histochemical profiles of fish spinal motoneurons after cordotomy and axotomy of motor nerves
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M.J. Smit-Onel, B. Heuts, F. K. de Graaf, E. van Asselt, P.C. Diegenbach, and W. van Raamsdonk
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Time Factors ,medicine.medical_treatment ,Central nervous system ,Glucosephosphate Dehydrogenase ,Biology ,Lesion ,Reference Values ,medicine ,Animals ,Molecular Biology ,Zebrafish ,Dihydrolipoamide Dehydrogenase ,Motor Neurons ,Denervation ,Muscle Denervation ,Cordotomy ,Histocytochemistry ,Muscles ,musculoskeletal, neural, and ocular physiology ,General Neuroscience ,fungi ,Anatomy ,Motor neuron ,musculoskeletal system ,Spinal cord ,Succinate Dehydrogenase ,medicine.anatomical_structure ,Spinal Cord ,nervous system ,embryonic structures ,Neurology (clinical) ,medicine.symptom ,Axotomy ,Developmental Biology - Abstract
Histochemical profiles were made of identified spinal motoneurons from normal adult zebrafish and from animals subjected to cordotomy or unilateral axotomy of the motor nerves. The lesions caused an increase of the myotomal area with oxidative muscle fibers. We studied the question: do changes in the myotomal muscle configuration concur with changes in the enzyme histochemical profiles of innervating motoneurons? Based on the location and size of cell somata, two categories of motoneurons are distinguished: large white (W) motoneurons that innervate the deep fast, glycolytic muscle fibers, and smaller red and intermediate (RI) motoneurons that innervate the superficial slow oxidative and intermediate muscle fibers. In normal animals, glucose-6-phosphate dehydrogenase activity is high in the large W motoneurons and relatively low in the small RI motoneurons. The reverse holds for succinate dehydrogenase activity is high in the large W motoneurons and relatively low in the small RI motoneurons. The reverse holds for succinate dehydrogenase activity. W and RI motoneurons show similar nicotinamide adenine dinucleotide diaphorase activity. Short- (2 weeks) and long- (8 weeks) term effects of lesions were studied. The results show that: (1) the 3 types of lesions lead to prolonged changes in the enzyme histochemical profiles of spinal motoneurons. The type of change depends on the type of lesion and on the type of motoneuron; (2) unilateral axotomy of the motor nerves affects the histochemical characteristics of spinal motoneurons and the myotomal muscle fiber type configuration on the ipsi- and contralateral side. The contralateral effects are conceived as adaptations to maintain a left-right symmetry in the motor output.
- Published
- 1990
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31. K88 fimbriae as carriers of heterologous antigenic determinants
- Author
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Bauke Oudega, S. van der Veen, F K de Graaf, D. Bakker, and F. G. van Zijderveld
- Subjects
medicine.drug_class ,Immunoblotting ,Molecular Sequence Data ,Fimbria ,DNA, Recombinant ,Gene Expression ,Heterologous ,Enzyme-Linked Immunosorbent Assay ,Monoclonal antibody ,medicine.disease_cause ,Microbiology ,Epitope ,Epitopes ,Antigen ,Enterotoxigenic Escherichia coli ,Escherichia coli ,medicine ,Amino Acid Sequence ,Peptide sequence ,Antigens, Bacterial ,Base Sequence ,biology ,Escherichia coli Proteins ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Immunohistochemistry ,Enterobacteriaceae ,Molecular biology ,Microscopy, Electron ,Infectious Diseases ,Fimbriae, Bacterial ,Antigens, Surface ,Mutation ,bacteria ,Fimbriae Proteins - Abstract
The K88 fimbriae of enterotoxigenic Escherichia coli are strongly immunogenic antigens that can be used to evoke protective immunity. To find out whether these fimbriae can be used as carriers for foreign epitopes, a highly variable region present in the primary structure of the different K88 variants was replaced with five different heterologous epitopes to investigate to what extent these insertions affected the expression, assembly (biogenesis), stability and immunogenic properties of the resulting hybrid fimbriae. Amino acid residues 163–173, were replaced using site-directed in vitro mutagenesis and the hybrid fimbriae were tested for these aspects using ELISA, immunoelectronmicroscopy and immunoblotting. Replacement of this highly variable region did not affect the biosynthesis of fimbriae, although all mutations tested resulted in a reduced expression depending on the epitope inserted. Testing of the different hybrid fimbriae with a panel of monoclonal antibodies raised against the various K88 serotypes K88ab, K88ac and K88ad indicated that replacement of amino acid sequence 163–173 did not affect conserved or K88ab specific epitopes but the K88ac and K88ad specific conformation was lost. Immunization with hybrid fimbriae raises antibodies specific for the inserted heterologous epitopes.
- Published
- 1990
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32. The 987P gene cluster in enterotoxigenic Escherichia coli contains an STpa transposon that activates 987P expression
- Author
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F. K. de Graaf, P Klaasen, M J Woodward, and F. G. van Zijderveld
- Subjects
DNA, Bacterial ,Transposable element ,Inverted repeat ,Molecular Sequence Data ,Immunology ,Biology ,Molecular cloning ,medicine.disease_cause ,Microbiology ,Enterotoxigenic Escherichia coli ,Gene cluster ,Escherichia coli ,medicine ,Insertion sequence ,Gene ,Genetics ,Base Sequence ,Chromosome Mapping ,Gene Expression Regulation, Bacterial ,Molecular biology ,Infectious Diseases ,Fimbriae, Bacterial ,Multigene Family ,DNA Transposable Elements ,Parasitology ,Research Article - Abstract
The genetic determinant for the production of 987P fimbriae has been cloned into pBR322. Analysis of frequently occurring deletions in the resultant recombinant plasmid, pPK180, revealed that the 987P gene cluster contains a transposon that encodes the synthesis of heat-stable enterotoxin STpa and is flanked by inverted repeats of IS1. Hybridization experiments with STpa- and 987P-specific probes demonstrated that a variety of STpa+ 987P+ wild-type Escherichia coli strains contained contiguous STpa-987P DNA, most likely on their chromosome. Transcription of the 987P gene cluster appeared to be activated by the adjacent IS1 element.
- Published
- 1990
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33. CONTROL OF TEMPERATURE-DEPENDENT SYNTHESIS OF K99 FIMBRIAE
- Author
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Martin Braster, Marjan W. van der Woude, Henk W. van Verseveld, Frits K. de Graaf, and Molecular Cell Physiology
- Subjects
Operon ,animal diseases ,Fimbria ,Temperature ,lac operon ,Biology ,Hydrogen-Ion Concentration ,medicine.disease_cause ,Molecular biology ,Microbiology ,trp operon ,Plasmid ,Fimbriae, Bacterial ,medicine ,Genetics ,Escherichia coli ,bacteria ,gal operon ,L-arabinose operon ,Molecular Biology ,Plasmids - Abstract
The influence of temperature on the production of K99 fimbriae by Escherichia coli was determined in cultures growing at constant specific growth rate in continuous cultures. In a wild type strain, in which the K99 operon is present on a low copy number plasmid, low cultivation temperature repressed the K99 production. This temperature-dependent production was not observed after introduction of multicopies of the regulatory region of the K99 operon into this strain, nor in E. coli K12 harbouring a recombinant, multicopy plasmid encoding the K99 operon. These results are in agreement with a regulation model in which a regulatory factor, most likely a repressor, inhibits expression of the K99 operon at low temperatures.
- Published
- 1990
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34. The penultimate tyrosine residue of the K99 fibrillar subunit is essential for stability of the protein and its interaction with the periplasmic carrier protein
- Author
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Bert Simons, Charles R. Malij, Bauke Oudega, Frits K. de Graaf, and Paul Rathman
- Subjects
chemistry.chemical_classification ,Protein subunit ,Periplasmic space ,Biology ,Microbiology ,Molecular biology ,Stop codon ,Amino acid ,Residue (chemistry) ,Protein structure ,chemistry ,Biochemistry ,Genetics ,Tyrosine ,Site-directed mutagenesis ,Molecular Biology - Abstract
The role of the penultimate and conserved tyrosine residue of the K99 major fibrillar subunit (FanC) in fibrillae biosynthesis and functioning was investigated. By using oligonucleotide-directed in vitro mutagenesis the TAT codon of tyrosine-158 of fanC was changed into a TAG stop codon. The mutant fanC gene encoded a truncated major subunit lacking the two carboxyl-terminal amino acid residues. Furthermore, the tyrosine residue (position 158) was replaced by a serine residue or by a glutamic acid residue. The effect of these mutations on the expression and binding capacity of K99 fibrillae was investigated by using an ELISA, an haemagglutination assay, Escherichia coli minicells and suppressor strains. All mutations completely blocked K99 fibrillae biosynthesis and haemagglutination activity. The mature form of the truncated mutant FacC polypeptide could not be detected in minicells, but its precursor was expressed at a normal level. The results showed that the penultimate tyrosine residue is essential for the expression of mature fibrillar subunits and suggested a function in the interaction with the periplasmic transport protein FanE.
- Published
- 1990
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35. The MNB/DYRK1A protein kinase: genetic and biochemical properties
- Author
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J, Galceran, K, de Graaf, F J, Tejedor, and W, Becker
- Subjects
Sequence Homology, Amino Acid ,Molecular Sequence Data ,Animals ,Humans ,Amino Acid Sequence ,Protein Serine-Threonine Kinases ,Protein-Tyrosine Kinases - Abstract
The "Down syndrome critical region" of human chromosome 21 has been defined based on the analysis of rare cases of partial trisomy 21. Evidence is accumulating that DYRK1A, one of the 20 genes located in this region, is an important candidate gene involved in the neurobiological alterations of Down syndrome. Both the structure of the DYRK1A gene and the sequence of the encoded protein kinase are highly conserved in evolution. The protein contains a unique assembly of structural motifs outside the catalytic domain, including a nuclear localization signal, a PEST region, and a repeat of 13 consecutive histidines. MNB/DYRK1A and related kinases are unique among serine/threonine-specific protein kinases in that their activity depends on tyrosine autophosphorylation in the catalytic domain. Also, evidence is accumulating that mRNA levels of MNB/DYRK1A are subject to tight regulation. A number of putative substrates of MNB/DYRK1A have emerged in the recent years, the majority of them being transcription factors. Although the function of MNB/DYRK1A in intracellular signalling and regulation of cell function is still poorly defined, current evidence suggests that the kinase may play a role in the regulation of gene expression.
- Published
- 2004
36. The MNB/DYRK1A protein kinase: Genetic and biochemical properties
- Author
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Juan Galceran, K. de Graaf, F. J. Tejedor, and Walter Becker
- Subjects
Regulation of gene expression ,DYRK1A ,Kinase ,Biology ,Chromosome 21 ,Protein kinase A ,Transcription factor ,Gene ,Cell biology ,DYRK1A Gene - Abstract
The “Down syndrome critical region” of human chromosome 21 has been defined based on the analysis of rare cases of partial trisomy 21. Evidence is accumulating that DYRK1A, one of the 20 genes located in this region, is an important candidate gene involved in the neurobiological alterations of Down syndrome. Both the structure of the DYRK1A gene and the sequence of the encoded protein kinase are highly conserved in evolution. The protein contains a unique assembly of structural motifs outside the catalytic domain, including a nuclear localization signal, a PEST region, and a repeat of 13 consecutive histidines. MNB/DYRK1A* and related kinases are unique among serine/threonine-specific protein kinases in that their activity depends on tyrosine autophosphorylation in the catalytic domain. Also, evidence is accumulating that mRNA levels of MNB/DYRK1A are subject to tight regulation. A number of putative substrates of MNB/DYRK1A have emerged in the recent years, the majority of them being transcription factors. Although the function of MNB/DYRK1A in intracellular signalling and regulation of cell function is still poorly defined, current evidence suggests that the kinase may play a role in the regulation of gene expression.
- Published
- 2003
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- View/download PDF
37. Safety and efficacy of an oil-adjuvant vaccine against haemorrhagic septicaemia in buffalo calves: cross-protection between the serotypes B:2,5 and E:2,5
- Author
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N. H. Shah, A.A. C. Jacobs, and E K. de Graaf
- Subjects
Serotype ,Veterinary medicine ,Pasteurella multocida ,Buffaloes ,Haemorrhagic Septicaemia ,animal diseases ,Injections, Intramuscular ,Adjuvants, Immunologic ,Immunity ,Injection site ,Medicine ,Animals ,Oil adjuvant ,Serotyping ,Hemorrhagic Septicemia ,Immunization Schedule ,General Veterinary ,business.industry ,Vaccination ,Rectal temperature ,General Medicine ,Systemic reaction ,Treatment Outcome ,Bacterial Vaccines ,business ,Oils - Abstract
The safety, efficacy and duration of immunity of an improved oil-adjuvant vaccine against haemorrhagic septicaemia, containing inactivated cells of Pasteurella multocida serotype B:2,5, were tested in young buffalo calves in Pakistan. For safety testing, five buffalo calves were vaccinated intramuscularly with twice the normal dose, and six weeks later with a normal dose. Except for a transient rise in rectal temperature at six hours after the vaccinations, no systemic reactions were observed. The buffaloes remained in good condition and had a normal appetite. No local reactions were observed at the injection site. For efficacy testing two trials were carried out. In the first, buffalo calves were vaccinated intramuscularly either with two doses two-and-a-half months apart, or with a single dose, or left unvaccinated. They were challenged subcutaneously with virulent P multocida after eight, 13 or 15 months. After challenge at eight months the four buffaloes given two doses and the buffalo given one dose were protected, whereas the control animal developed the typical signs of the disease. After the challenges at 13 and 15 months, the vaccinated animals were still protected whereas the control animals died. In the second trial, buffalo calves were vaccinated intramuscularly either with two doses two months apart, or with a single dose at two months or left unvaccinated. The buffaloes were challenged after eight or 14 months. After challenge at eight months the four control animals died, whereas three of the four buffaloes given a single dose were protected. After challenge at 14 months, the three control animals died, whereas four of the five buffaloes given two doses and both the buffaloes given a single dose were protected. To test for cross-protection against the heterologous serotypes E:2,5 and B:3,4, groups of mice were vaccinated once or left unvaccinated. Four weeks later, the vaccinated and control groups were challenged with a dilution series of the different challenge cultures. The vaccine appeared to induce protection against challenge with different strains of serotypes B:2,5 and E:2,5 but not against strains of serotype B:3,4.
- Published
- 2001
38. A family therapeutic approach to transgenerational traumatization
- Author
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Theo K. de Graaf
- Subjects
Adult ,Male ,Psychotherapist ,Social Psychology ,Military service ,Martyr ,Developmental psychology ,Therapeutic approach ,Transgenerational epigenetics ,The Holocaust ,Phenomenon ,Anxiety, Separation ,Humans ,Identification, Psychological ,Marriage ,Parent-Child Relations ,Child ,Child neglect ,Holocaust ,Parental deprivation ,Clinical Psychology ,Child, Preschool ,Intergenerational Relations ,Jews ,Family Therapy ,Female ,Family Relations ,Psychology ,Social Sciences (miscellaneous) ,Stress, Psychological - Abstract
The phenomenon of transgenerational traumatization has currently become widely recognized and described, although the task of disentangling the underlying interactional mechanisms remains a difficult one. These transgenerational mechanisms were first detected in families of the survivors of the Holocaust, but they may be equally prominent in families of parents who have been traumatized in other ways, for example, as victims of child neglect and abuse, as orphaned children, or during military service. In cases in which parents have themselves been subjected to early parental deprivation, one or more children may become projectively identified with a parent's (posttraumatic) “bad child”-self, whereas the parent him/herself has identified with — enacts the role of — the idealized internal “martyr” parent. A case study is presented describing the individual and family therapeutic treatment of a woman who, as a child, had been traumatically separated from her parents.
- Published
- 1998
39. Diet-induced thermogenesis and satiety in humans after full-fat and reduced-fat meals
- Author
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W. P. H. G. Verboeket-Van De Venne, K.H. van het Hof, N. E. G. Wijckmans-Duijsens, K. De Graaf, Margriet S. Westerterp-Plantenga, and Jan A. Weststrate
- Subjects
Adult ,Male ,Hunger ,education ,Experimental and Cognitive Psychology ,Biology ,Diet induced thermogenesis ,Diet-induced thermogenesis ,Satiety Response ,Body Mass Index ,Behavioral Neuroscience ,Animal science ,Energy intake reduction ,Reduced fat ,Humans ,Food science ,Diet, Fat-Restricted ,VLAG ,Human Nutrition & Health ,Meal ,digestive, oral, and skin physiology ,Humane Voeding & Gezondheid ,food and beverages ,Middle Aged ,Dietary Fats ,Satiety ,Fat intake reduction ,Metabolic rate ,Energy density ,Female ,Body mass index ,Thermogenesis ,Body Temperature Regulation ,Human - Abstract
Diet-induced thermogenesis was measured during and after a full-fat lunch, an identical but reduced-fat, reduced-energy lunch, and an iso-energetic reduced-fat lunch in 32 normal-weight men and women, age 35-55. Hunger and satiety were scored during and after the lunches, and their relationship to diet-induced thermogenesis was assessed. Diet-induced thermogenesis was relatively higher after the reduced-fat, reduced-energy lunch compared to the full-fat lunch (6.7% vs. 5.2%; p < 0.05). The respiratory quotients were significantly lower after the full-fat lunch than after the 2 reduced-fat lunches (p < 0.05). After the iso-energetic reduced-fat lunch, hunger scores were significantly reduced and satiety scores significantly increased (p < 0.05) until 1800 h. compared to the other 2 lunches. Satiety scores were positively related to the magnitude of diet-induced thermogenesis expressed as an absolute increase in metabolic rate during and after the meal. We conclude that hunger and satiety scores, substrate utilization, and diet-induced thermogenesis showed clear and different short-term responses to diets that differed with respect to the percentage energy from fat and/or the energy content of the meal.
- Published
- 1997
40. Repeated exposure more effective than flavour flavour learning as mechanism to increase vegetable consumption in pre-school children
- Author
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K. De Graaf, V. De Wild, and Gerry Jager
- Subjects
Nutrition and Dietetics ,Animal science ,business.industry ,Flavour ,Outcome measures ,Conditioning ,Medicine ,Pre school ,business ,General Psychology - Abstract
Children’s habitual diets contain too much high-energy-dense food like lipids and carbohydrates, but little low-energy foods like vegetables. Promoting vegetable intake in children serves better nutritional standards and energy balance. However, since most children dislike vegetables, increasing their intake is a challenge. We investigated the relative effectiveness of repeated exposure (RE) and Flavour-Flavour-Learning (FFL) in increasing vegetable intake and acceptance in pre-schoolers (n = 39). During an intervention period of seven weeks, toddlers consumed vegetable crisps (freeze-dried red beet and parsnip) twice per week. Half of the group received red beet crisps with a dip of tomato-ketchup (C+), and parsnip with a neutral white-sauce (C−), whereas for the other half the order was reversed (red beet C−, parsnip C+). Outcome measures were preference and ad libitum consumption of both crisp flavours (without dip-sauces), measured before, shortly after the intervention, and two and six months following conditioning to assess longer-term effects. Intake increased significantly after the intervention for both vegetables (on average with 8g; an increase of approx. 300%), and this effect was persistent even six months afterwards. The increase was irrespective of crisps being offered with C+ or C− dip sauce. No changes in initial preference for either red beet or parsnip were found. This suggests a robust and persistent effect of RE but no effect of FFL. In conclusion, simply offering pure vegetable tastes repeatedly is sufficient to increase intake over time, rather than adding flavour to the food.
- Published
- 2013
- Full Text
- View/download PDF
41. Short term effect of chicory root fibre on appetite ratings and energy intake
- Author
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D.B. Dull, Anne G. M. Wijlens, Monica Mars, and K. De Graaf
- Subjects
Chicory root ,Food intake ,Nutrition and Dietetics ,business.industry ,media_common.quotation_subject ,digestive, oral, and skin physiology ,Inulin ,Dietary fibre ,Appetite ,Crossover study ,Lower energy ,chemistry.chemical_compound ,chemistry ,Medicine ,Term effect ,Food science ,business ,General Psychology ,media_common - Abstract
It has been shown that certain fibres can enhance satiety and lower energy intake. This effect largely depends on food matrix, degree of hydration and dosage. Dried chicory root pulp (CRP) is a good fibre-source. After inulin is extracted from chicory roots, the remaining CRP still contains much dietary fibre. We hypothesized that adding CRP to foods may enhance satiety and lower food intake. Moreover, we expected a larger effect when CRP is in a hydrated food (semi-liquid) than in a solid food (granola-bar). We performed a randomized crossover trial with five treatments: a high fibre semi-liquid (14 g CRP), a low fibre semi-liquid (7 g CRP), a control semi-liquid (no CRP), a high fibre bar (14 g CRP), and a control bar (no CRP). Data of 15 lean men (20 ± 3 years) and 15 lean women (21 ± 3 years) were included. Satiety feelings were rated before and multiple times after consumption of the foods. Ninety minutes after consumption, ad libitum energy intake was measured at lunch. High fibre foods enhanced satiety feelings more than their controls (p-values
- Published
- 2013
- Full Text
- View/download PDF
42. Temporal dominance of sensory and emotional sensations for chocolate
- Author
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Gerry Jager, K. De Graaf, Markus Stieger, Pascal Schlich, and Irene Tijssen
- Subjects
Nutrition and Dietetics ,food ,Sensory system ,Wine tasting ,Time moment ,Dark chocolate ,Psychology ,Social psychology ,General Psychology ,food.food ,Cognitive psychology - Abstract
Mapping food-evoked emotions in addition to sensory profiling is topical. For sensory profiling, Temporal Dominance of Sensations (TDS) method focus on temporal evolution of sensory attributes over time. It seems plausible that food-evoked emotions show similar temporal dynamics that could be related to sensory dynamics. This study assessed temporal dynamics of sensory and emotional attributes during chocolate tasting. We used the TDS method for dynamic information on a list of 10 sensory attributes. Comparably, Temporal Dominance of Emotions (TDE) was assessed, by replacing the sensory list with emotional attributes. Sixty-two participants assessed TDS and TDE for five samples of different flavoured dark chocolate (i.e. Blueberry, Orange, Mint, and plain dark with 70% vs. 90% cacao). Multivariate comparisons (Hotelling- T 2 -test) using dominance durations showed significant differences between products based on sensory ( p 0.05 ) and emotional attributes ( p 0.05 ). TDS band plots revealed products to differ based on their dominant sensory attributes, with different attributes peaking at different time moments for various flavours. In line with our expectation, TDE band plots showed that products also differed in the temporal distribution of dominant emotional attributes. Comparison of TDS and TDE band plots suggested that, compared to the plain chocolates, the flavoured chocolates were characterized by more complex sensory profiles with stronger dynamics over time. Interestingly, this was associated with more positive/active emotional attributes gaining dominance over time, e.g. ‘interested’, ‘energetic’, and ‘happy’. These findings suggest TDE to be a promising new venue in characterising food-evoked emotions in relation to sensory profiling.
- Published
- 2013
- Full Text
- View/download PDF
43. Binding of host iron-binding proteins and expression of iron-regulated membrane proteins by different serotypes of Pasteurella multocida causing haemorrhagic septicaemia
- Author
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José W. Veken, P Klaasen, Najmul H. Shah, Frits K. de Graaf, and Bauke Oudega
- Subjects
Serotype ,Pasteurella multocida ,Iron ,Microbiology ,Hemoglobins ,Mice ,Animals ,Hemorrhagic Septicemia ,chemistry.chemical_classification ,biology ,Lactoferrin ,Binding protein ,Transferrin ,Membrane Proteins ,Iron-binding proteins ,biology.organism_classification ,In vitro ,Infectious Diseases ,chemistry ,Membrane protein ,biology.protein ,Protein Binding - Abstract
Pasteurella multocida strains of serotype B: 2,5, B: 3,4 and E: 2,5 are associated with haemorrhagic septicaemia in domestic and feral ruminants. These strains were investigated for their ability to bind transferrin, lactoferrin and haemoglobin and for their ability to use these host iron-binding proteins as a source of iron. All strains bound haemoglobin, none of the strains bound lactoferrin, whereas transferrin binding was restricted to serotype B: 2,5 strains. Growth experiments indicated that transferrin (serotype B: 2,5) and haemoglobin could restore bacterial growth under iron-depleted conditions. Two distinct serotype-independent profiles of iron-regulated membrane proteins were expressed in vitro as well as in vivo .
- Published
- 1996
44. Toll-Like Receptor 4 (TLR4) Participates in the Immune Response to Pancreatic Islets: Implications for Human Islet Transplantation
- Author
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Ph Morel, Laurianne Santa Giovannoni, Th Berney, Greg Elson, K. De Graaf, Bruno Daubeuf, Domenico Bosco, Stéphanie Lacotte, Yannick D. Muller, and Marie Kosco-Vilbois
- Subjects
Transplantation ,Toll-like receptor ,geography ,geography.geographical_feature_category ,medicine.anatomical_structure ,Immune system ,Pancreatic islets ,Cancer research ,medicine ,TLR4 ,Biology ,Islet - Published
- 2012
- Full Text
- View/download PDF
45. Characterization of gangliosides of epithelial cells of calf small intestine, with special reference to receptor-active sequences for enteropathogenic Escherichia coli K99
- Author
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S, Teneberg, P T, Willemsen, F K, de Graaf, G, Stenhagen, W, Pimlott, P A, Jovall, J, Angström, and K A, Karlsson
- Subjects
Magnetic Resonance Spectroscopy ,Molecular Sequence Data ,Epithelial Cells ,Receptors, Cell Surface ,Epithelium ,Mass Spectrometry ,Epitopes ,Carbohydrate Sequence ,Reference Values ,Gangliosides ,Intestine, Small ,Escherichia coli ,Animals ,Cattle ,Chromatography, Thin Layer ,Intestinal Mucosa ,Protons - Abstract
Glycolipids were prepared from epithelial cells of the small intestine of a newborn calf and assayed for Escherichia coli K99 binding activity on thin-layer chromatograms and in microtiter wells. The bacteria did not bind to any of the non-acid glycolipids, while in the acid fraction several binding-positive glycolipids were detected. The acid glycolipids were isolated and characterized by mass spectrometry, proton NMR spectroscopy and other methods. The following gangliosides were identified, mainly from the epithelial cells from the upper part of the small intestine: NeuAc alpha 2-3Gal beta 1-4Glc beta 1-Cer (NeuAc-GM3), NeuGc alpha 2-3Gal beta 1-4Glc beta 1-Cer (NeuGc-GM3), GalNAc beta 1-4(NeuGc alpha 2-3)Gal beta 1-4Glc beta 1-Cer (NeuGc-GM2), Gal beta 1-3GalNAc beta 1-4(NeuGc alpha 2-3)Gal beta 1-4Glc beta 1-Cer (NeuGc-GM1), and NeuGc alpha 2-3Gal beta 1-3GalNAc beta 1-4(NeuGc alpha 2-3)Gal beta 1-4Glc beta 1-Cer (NeuGc-GD1a). A positive binding was demonstrated to NeuGc-GM3, NeuGc-GM2, and NeuGc-GD1a, while NeuAc-GM3 and NeuGc-GM1 were negative. The binding pattern differed somewhat for total acid glycolipids of epithelial cells from three different parts of the small intestine. Based on binding preferences of E. coli K99 to a number of glycolipids of various origins, in comparison with calculated minimum energy conformations, a binding epitope was delineated.
- Published
- 1994
46. Stability and function of the signal peptide of the pCloDF13-derived bacteriocin release protein
- Author
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Quido A. Valent, F. J. van der Wal, C M ten Hagen-Jongman, F K de Graaf, Bauke Oudega, and Joen Luirink
- Subjects
Signal peptide ,Alanine ,Isopropyl Thiogalactoside ,Escherichia coli Proteins ,Recombinant Fusion Proteins ,Mutant ,Molecular Sequence Data ,Biology ,Protein Sorting Signals ,Microbiology ,Cell biology ,Bacteriocin ,Biochemistry ,Bacterial Proteins ,Cytoplasm ,Genes, Bacterial ,Escherichia coli ,Mutagenesis, Site-Directed ,Viability assay ,Amino Acid Sequence ,Peptide sequence ,Protein Processing, Post-Translational ,Function (biology) - Abstract
Summary: The pCloDF13-derived bacteriocin release protein (BRP) is synthesized as a prelipoprotein with a signal peptide which remains stable after processing. This signal peptide accumulates in the cytoplasmic membrane and is, together with the mature BRP, required for efficient release of cloacin DF13. We investigated the structural requirements for stability of the BRP signal peptide by constructing hybrid signal peptides consisting of parts of the BRP and Lpp signal peptides. Signal peptide stability was investigated by pulse-labelling and pulse-chase experiments. To study the functioning of the BRP signal peptide, the hybrid constructs were tested for their ability to promote BRP-mediated cloacin DF13-release and their ability to affect the viability of the host cells. The results obtained suggest that the N-terminal part of the BRP signal peptide together with the C-terminal alanine residue are important for stability. When expressed as a separate entity, all mutant signal peptides that contain a part of the BRP signal peptide are capable of affecting cell viability. The results indicated a possible correlation between stability of the BRP signal peptide and cloacin DF13-release.
- Published
- 1994
47. Leucine-responsive regulatory protein, IS1 insertions, and the negative regulator FaeA control the expression of the fae (K88) operon in Escherichia coli
- Author
-
F K de Graaf, T T Huisman, P Klaasen, and D. Bakker
- Subjects
DNA, Bacterial ,Operon ,Fimbria ,Molecular Sequence Data ,Biology ,Microbiology ,Fimbriae Proteins ,Bacterial Proteins ,Sequence Homology, Nucleic Acid ,Genes, Regulator ,Leucine-responsive regulatory protein ,Escherichia coli ,Amino Acid Sequence ,Cloning, Molecular ,Promoter Regions, Genetic ,Molecular Biology ,Peptide sequence ,Regulator gene ,Genetics ,Regulation of gene expression ,Antigens, Bacterial ,Base Sequence ,Sequence Homology, Amino Acid ,Escherichia coli Proteins ,Gene Expression Regulation, Bacterial ,biochemical phenomena, metabolism, and nutrition ,Leucine-Responsive Regulatory Protein ,female genital diseases and pregnancy complications ,DNA-Binding Proteins ,Repressor Proteins ,Regulatory sequence ,Antigens, Surface ,biology.protein ,DNA Transposable Elements ,bacteria ,Transcription Factors - Abstract
Nucleotide sequence analysis of the fae operon encoding the biosynthesis of K88 fimbriae revealed the presence of two divergently transcribed regulatory genes, faeA and faeB, separated by two inverted IS1 insertions. The amino acid sequences of the regulatory proteins FaeA and FaeB show similarity to the primary structure of corresponding regulatory proteins involved in the biosynthesis of Pap and S fimbriae. Expression of faeA is positively controlled by the FaeA protein, whereas K88 fimbriae production is negatively controlled by the co-operative activity of FaeA and the leucine-responsive regulatory protein (Lrp). Exchange of FaeA for Papl, a positive regulator of Pap fimbriae expression, also represses K88 production indicating that the combination Papl/Lrp has opposite effects on fae and pap expression. Mutations in faeB had no effect on the biosynthesis of K88 fimbriae. The presence of the two IS1 insertions is hypothesized to neutralize part of the repression of K88 biosynthesis by FaeA/Lrp. Like pap, the fae operon does not respond to exogenous leucine.
- Published
- 1994
48. Binding of bovine transferrin by Pasteurella multocida serotype B:2,5, a strain which causes haemorrhagic septicaemia in buffalo and cattle
- Author
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F K de Graaf, Joen Luirink, Bauke Oudega, and J.W. Veken
- Subjects
Serotype ,Pasteurella multocida ,Buffaloes ,animal diseases ,Virulence ,Cattle Diseases ,Transferrin receptor ,Hemorrhagic septicemia ,Microbiology ,Species Specificity ,Receptors, Transferrin ,otorhinolaryngologic diseases ,Genetics ,medicine ,Animals ,Serotyping ,Molecular Biology ,Hemorrhagic Septicemia ,chemistry.chemical_classification ,biology ,Pasteurellaceae ,Transferrin ,bacterial infections and mycoses ,biology.organism_classification ,medicine.disease ,Virology ,chemistry ,Cattle ,Pasteurellosis ,Bacterial Outer Membrane Proteins - Abstract
Pasteurella multocida serotype B:2,5, which causes haemorrhagic septicaemia in buffalo and cattle, was examined for the presence of transferrin-binding proteins. An 82-kDa iron-regulated outer membrane protein was found which specifically binds bovine transferrin. In contrast, P. multocida serotype B:3,4, associated with haemorrhagic septicaemia in feral ruminants, did not express transferrin-binding proteins. These results might indicate a role for transferrin binding in the pathogenesis of haemorrhagic septicaemia in cattle and buffalo.
- Published
- 1994
49. Escherichia coli periplasmic chaperone FaeE is a homodimer and the chaperone-K88 subunit complex is a heterotrimer
- Author
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Frits K. de Graaf, Bauke Oudega, R.W. Visschers, and Olaf Mol
- Subjects
Macromolecular Substances ,Protein subunit ,Molecular Sequence Data ,Enzyme-Linked Immunosorbent Assay ,Biology ,medicine.disease_cause ,Microbiology ,Bacterial Proteins ,medicine ,Escherichia coli ,Cloning, Molecular ,Molecular Biology ,chemistry.chemical_classification ,Antigens, Bacterial ,Expression vector ,Base Sequence ,Isoelectric focusing ,Escherichia coli Proteins ,Periplasmic space ,Chromatography, Ion Exchange ,Recombinant Proteins ,Amino acid ,Biochemistry ,chemistry ,Oligodeoxyribonucleotides ,Genes, Bacterial ,Chaperone (protein) ,Multigene Family ,Antigens, Surface ,biology.protein ,Chromatography, Gel ,Protein quaternary structure ,Electrophoresis, Polyacrylamide Gel ,Fimbriae Proteins ,Isoelectric Focusing ,Molecular Chaperones - Abstract
Summary The interaction of FaeE, a periplasmic chaperone involved in K8B biosynthesis, and the major fimbrial subunit FaeG was Investigated. The genes encoding the two proteins were subcloned together in the expression vector pINIIIA1, Cells expressing the sub-cloned genes accumulated in their periplasm a complex of FaeE and FaeG. This complex was purified by isoelectric focusing and anion-exchange fast-protein liquid chromatography. SOS-PAGE, native gel etectrophoresis, immunoblotting and determination of the N-terminal amino acid sequences and the molar ratio of the W-terminal amino acid residues revealed that the complex is a heterotrimer consisting of two molecules of FaeE and one molecule of FaeG. The periplasmic chaperone FaeE was purified from the periplasm of cells expressing only the subcloned faeE gene. Gel filtration, protein cross-linking analysis and a biophysical approach in which the rotation diffusion coefficient of the purified FaeE was determined led to the conclusion that the native FaeE chaperone is a homodimer.
- Published
- 1994
50. Effects of repeated exposure to either fruits or vegetables during the first 18 days of weaning on infant's fruit and vegetable acceptance
- Author
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J.W. de Vries, K. De Graaf, Jos Mojet, and C. Barends
- Subjects
Nutrition and Dietetics ,Animal science ,business.industry ,Weaning ,Medicine ,business ,General Psychology - Published
- 2011
- Full Text
- View/download PDF
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