69 results on '"Juni N"'
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2. An eye imaginal disc-specific transcriptional enhancer in the long terminal repeat of thetom retrotransposon is responsible for eye morphology mutations ofDrosophila ananassae
- Author
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Awasaki, T., Juni, N., and Yoshida, K. M.
- Published
- 1996
- Full Text
- View/download PDF
3. DeepSun: Klasifikasi Fase Cahaya Matahari Berdasarkan Warna Menggunakan CNN
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warnia nengsih, Juni Nurma Sari Juni Nurma Sari, Cici Angresta, and Hasna Fikriyah Dwinas
- Subjects
deep sun ,cnn ,Science ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Penelitian ini berbasis metode DeepSun, sebuah sistem yang menggunakan Jaringan Syaraf Tiruan Konvolusi (CNN) untuk mengklasifikasikan fase cahaya matahari berdasarkan warna. Fase cahaya seperti Golden Hour, Blue Hour, dan Pink Hour memiliki karakteristik visual yang khas, dan mengidentifikasi fase cahaya ini secara otomatis dapat memberikan pemahaman yang lebih baik tentang suasana dan estetika suatu gambar. Pendekatan yang diusulkan menggunakan dataset yang terdiri dari gambar-gambar yang dikumpulkan selama berbagai kondisi cahaya matahari. Data tersebut dianotasi dengan label fase cahaya yang sesuai. CNN digunakan untuk mengekstraksi fitur-fitur penting dari gambar-gambar ini. Kemudian, fitur-fitur tersebut digunakan sebagai input untuk pengklasifikasi yang dilatih menggunakan algoritma pembelajaran mesin. Eksperimen dilakukan untuk mengevaluasi kinerja sistem DeepSun. Hasil-hasil yang diperoleh menunjukkan bahwa sistem ini mampu mengklasifikasikan fase cahaya matahari dengan tingkat akurasi yang tinggi. Kesalahan klasifikasi terutama terjadi saat kondisi cahaya yang sangat mirip antara fase-fase tertentu. Namun, dengan meningkatkan jumlah data latih dan peningkatan arsitektur CNN, tingkat akurasi dapat ditingkatkan lebih lanjut. Dengan kemampuan untuk mengklasifikasikan fase cahaya matahari secara otomatis, DeepSun dapat membantu pengguna untuk memilih waktu yang tepat dalam mengambil gambar yang berkualitas. Selain itu, sistem ini juga dapat digunakan untuk meningkatkan pemrosesan gambar otomatis dan pengeditan yang berbasis pada fase cahaya yang diinginkan.
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- 2023
- Full Text
- View/download PDF
4. Effect of hydrogen on morphological changes in columnar structure of GaN grown by ECR–MBE
- Author
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Araki, T., Onogi, A., Juni, N., and Nanishi, Y.
- Published
- 2002
- Full Text
- View/download PDF
5. Efektivitas Sari Buah Lemon (Citrus limon (L.) Burm. f. sebagai Khelating Agent Logam Berat Tembaga
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Novena Yety Lindawati and Juni Nofitasari
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saribuah lemon ,nilai ec50 ,penurunan logam tembaga ,metode aas ,Pharmacy and materia medica ,RS1-441 - Abstract
Pendahuluan: Lemon (Citrus limon (L.) Burm. F merupakan salah satu buah yang mengandung asam sitrat. Asam Sitrat memiliki kemampuan mengikat logam berat, salah satunya logam berat tembaga. Tujuan: Tujuan dari penelitian ini adalah mengetahui efektivitas sari buah lemon dalam menurunkan logam berat tembaga. Uji Skrining fitokimia dilakukan untuk mengetahui kandungan metabolit sekunder yang terdapat dalam sari buah lemon. Metode: Penentuan penurunan kadar logam berat tembaga dilakukan dengan cara perasan buah lemon ditambahkan logam simulasi tembaga 10 ppm yang dibaca dengan metode Spektrofotometer Serapan Atom (AAS) dengan panjang gelombang 324,8 nm. Penentuan penurunan logam tembaga dilakukan dengan menggunakan seri konsentrasi sari buah lemon sebesar 10, 20, 30, 40, 50, 60 dan 70%. Hasil: Hasil penelitian menunjukkan bahwa sari buah lemon (Citrus limon (L.) Burm. f. mengandung metabolit berupa asam sitrat, alkaloid, saponin, dan steroid. Nilai rata-rata penurunan kadar logam tembaga setelah pemberian sari buah lemon kosentrasi 10% sebesar 0,69 (±0,42%), konsentrasi 20% sebesar 1,80 (± 0,42%), konsentrasi 30% sebesar 11,85 (± 1,28%), konsentrasi 40% sebesar 33,57 (± 0,33%), konsentrasi 50% sebesar 49,92 (± 0,86 %), konsentrasi 60% sebesar 54,14 (± 0,69%) dan konsentrasi 70% sebesar 64,89 (± 0,30%). Kesimpulan: Nilai efektivitas konsentrasi sari buah lemon yang mampu menurunkan kadar tembaga sebesar 50% (EC50) adalah 55,88%.
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- 2021
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6. Learning Strategy to Develop Critical Thinking, Creativity, and Problem-Solving Skills for Vocational School Students
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Muchlas Samani, Sunwinarti Sunwinarti, Bima A.W. Putra, Reza Rahmadian, and Juni Noor Rohman
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contextual project-based learning, creativity, critical thinking, problem-solving skills ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Critical thinking, creativity, and problem-solving skills are critical for vocational schools graduates to enter the workforce in the industrial era 4.0. This study aims to find a learning strategy that can develop these three skills. The study was carried out at SMK X Mojokerto in the Automotive Technology Program in the academic year of 2017/2018. Data were collected using an observation sheet validated by three experts and tested with inter-rater reliability. The data analysis method is t-test. The results of data analysis showed that the Contextual Project Based Learning (CPjBL) was generally effective to improve critical thinking, creativity, and problem-solving skills. Detailed observation included each of these aspects. The findings showed that the implementation of contextualized learning problems could improve the aspect of originality and problem understanding skills, which was usually difficult to improve. On the other hand, CPjBL was not effective in developing the ability of analysis in critical thinking and look-back in problem-solving skills.
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- 2019
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7. Retrotransposon-induced ectopic expression of cut causes the Om(1A) mutant in Drosophila ananassae.
- Author
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Awasaki, T, primary, Juni, N, additional, Hamabata, T, additional, Yoshida, K, additional, Matsuda, M, additional, Tobari, Y N, additional, and Hori, S H, additional
- Published
- 1994
- Full Text
- View/download PDF
8. An eye imaginal disc-specific transcriptional enhancer in the long terminal repeat of the tom retrotransposon is responsible for eye morphology mutations of Drosophila ananassae.
- Author
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Awasaki, T., Juni, N., and Yoshida, K.
- Published
- 1996
- Full Text
- View/download PDF
9. The Drosophila Bruton's tyrosine kinase (Btk) homolog is required for adult survival and male genital formation.
- Author
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Baba, K, Takeshita, A, Majima, K, Ueda, R, Kondo, S, Juni, N, and Yamamoto, D
- Abstract
We isolated a Drosophila fickleP (ficP) mutant with a shortened copulatory duration and reduced adult-stage life span. The reduced copulatory duration is ascribable to incomplete fusion of the left and right halves of the apodeme that holds the penis during copulation. ficP is an intronic mutation occurring in the Btk gene, a gene which encodes two forms (type 1 and type 2) of a Bruton's tyrosine kinase (Btk) family cytoplasmic tyrosine kinase as a result of alternative exon usage. The ficP mutation prevents the formation of the type 2 isoform but leaves expression of the type 1 transcript intact. Ubiquitous overexpression of the wild-type cDNA by using a heat shock 70 promoter during the late larval or pupal stages rescued the life span and genital defects in the mutant, respectively, establishing the causal relationship between the ficP phenotypes and the Btk gene mutation. The stage specificity of the rescuing ability suggests that the Btk gene is required for the development of male genitalia and substrates required for adult survival.
- Published
- 1999
10. Rancang Bangun Sistem Informasi Pengembangan Sumber Daya pada Level View Menggunakan Android (Studi Kasus : PT Chevron Pacific Indonesia)
- Author
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Putra Nugraha, Muhammad Arif F Ridha, and Juni Nurma Sari
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Science ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
PT Chevron Pacific Indonesia (CPI) memiliki sebuah program People Development yang terdiri dari training, mentoring, dan assignment. Pengelolaan data peserta (participant) dari program ini dilakukan oleh pihak Human Resources (HR) secara manual menggunakan aplikasi spreadsheet. Sistem informasi dibangun untuk memudahkan HR dari PT Chevron Pacific Indonesia dalam mengelola data participant dan membuat laporan (report) dari program People Development secara otomatis dan lebih cepat. Report yang dibangun tersedia dalam lima bentuk diantaranya, training graduation template, progress report, statistic report, scorecard, dan people metric. Sistem informasi ini dibangun dengan menggunakan arsitektur Model View Controller (MVC) dimana pada level view akan dibangun dalam dua bentuk tampilan, berupa aplikasi website dan aplikasi mobile dengan sistem operasi Android. Pada proyek akhir ini, dibangun aplikasi pada level view menggunakan smartphone dengan sistem operasi Android yang berintegrasi dengan controller berbasis Java. Aplikasi ini mengambil data JSON yang dikirim oleh controller dan mengirimkan data input dari smartphone dalam bentuk data JSON ke controller. Dengan adanya sistem informasi ini dapat meningkatkan kinerja dari pengelolaan data dan pembuatan report dari program People Development yang tersedia dalam aplikasi website juga dalam aplikasi smartphone dengan sistem operasi Android.
- Published
- 2015
11. Rancang Bangun Sistem Informasi Pengembangan Sumber Daya Manusia menggunakan Teknologi Java pada Level Control (Studi Kasus PT. Chevron Pacific Indonesia)
- Author
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Ogssa Sukardi, Juni Nurma Sari, and Ardianto Wibowo
- Subjects
Science ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
PT. Chevron Pacific Indonesia memiliki suatu program pelatihan untuk mengembangkan sumber daya manusia. Program pelatihan diadakan oleh pihak HR(Human Resource)dan ditujukan kepada pegawai yang baru bergabung atau memiliki pengalaman kerja kurang dari lima tahun di PT. Chevron Pacific Indonesia. Program ini membutuhkan sebuah sistem informasi berbasis web yang bisa diakses oleh peserta pelatihan . Sistem yang sudah ada masih menggunakan metode manual dalam mengolah data, sehingga membutuhkan waktu yang lama untuk memperoleh informasi dan menghasilkan laporan. Penelitian ini membahas bagaimana merancangan dan membangun sistem informasi yang dikembangkan menggunakan teknologi Java dengan menggunakan Spring Framework.Tujuan dari penelitian ini adalah merancang dan membangun sistem informasi berbasis web pada sisi controller yang dapat menghubungkan anatara sisi view dan sisi model. Sistem ini menerapkan konsep MVC, yaitu konsep yang memisahkan antara tiga lapisan diantaranya lapisan pemodelan data(Model), lapisan desain tampilan sistem(View), dan lapisan pengelola alur sistem(controller). Penelitian ini akan menitik beratkan pada pengembangan dan perancangan sistem dalam sisi controller yaitu membahas bagaimana alur sistem bekerja dan bagaimana peran controller dalam sistem ini. Hasil dari penelitian ini adalah sebuah sistem informasi Pengembangan Sumber Daya Manusia yang memepermudah pihak HR dalam memperoleh informasi atau laporan dan pembahasan bagaimana kinerja controller dalam menangani permintaan data dari level view.
- Published
- 2015
12. Rancang Bangun Sistem Informasi Pengembangan Sumber Daya Pada Level View Menggunakan Teknologi Java (Studi Kasus: PT Chevron Pacific Indonesia)
- Author
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Puja Hanifah, Juni Nurma Sari, and Yohana Dewi Lulu
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Science ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Pengembangan kinerja karyawan di suatu perusahaan sangat penting. Salah satu metode pengembangan karyawan dapat dilakukan dengan memberikan kelas-kelas training yang diberikan oleh Human Resource (HR). Selain kelas trainig, terdapat kelas mentoring dan assignment yang juga merupakan aspek penilaian terhadap pengembangan karyawan. Pengembangan karyawan yang ada di PT Chevron Pacific Indonesia masih manual menggunakan spreadsheet, sehingga membutuhkan waktu yang lama untuk menyelesaikan report.Oleh karena itu, untuk mempermudah kerja HR dibangun sebuah aplikasi pengembangan sumber daya menggunakan teknologi java. Aplikasi itu bernama People Development. Aplikasi ini dikembangkan dengan empat bagian yaitu model, control, view berupa aplikasi web, dan view pada aplikasi mobile. Pada proyek akhir ini difokuskan pada level view berupa aplikasi web. Aplikasi ini dibangun dengan menggunakan teknologi java yang dikembangkan menggunakan spring framework dan Bussiness Intelligence Reporting Tool (BIRT). BIRT adalah tool yang digunakan untuk memvisualisasikan data dan laporan. Pada sistem ini BIRT menghasilkan graduation report, statistic report, progress report, scorecard, dan people matric. Dengan adanya sistem ini memudahkan HR dalam pengolahan data dan memperoleh informasi.
- Published
- 2015
13. Immunometabolic Mechanisms of LANCL2 in CD4+ T Cells and Phagocytes Provide Protection from Systemic Lupus Erythematosus.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, Fitch SN, and Bassaganya-Riera J
- Subjects
- Animals, Mice, Humans, Disease Models, Animal, Mice, Inbred MRL lpr, Female, Mice, Inbred C57BL, Phosphate-Binding Proteins, Lupus Erythematosus, Systemic immunology, Membrane Proteins metabolism, Membrane Proteins genetics, CD4-Positive T-Lymphocytes immunology, Phagocytes immunology, Mice, Knockout
- Abstract
Lanthionine synthetase C-like 2 (LANCL2) is an immunoregulatory therapeutic target for autoimmune diseases. NIM-1324 is an investigational new drug aimed at addressing the unmet clinical needs of patients with systemic lupus erythematosus (SLE) by targeting the LANCL2 immunometabolic pathway. In R848 and bm12 adoptive transfer models of systemic inflammation that share pathologies with SLE, Lancl2-/- mice experienced greater mortality, increased spleen weight, and reduced CD25hi FOXP3+ CD4+ regulatory T cells compared with the wild type. Conversely, treatment with NIM-1324 in the wild type increased CD25hi FOXP3+ regulatory T cells while reducing inflammatory IL-17+ and IL-21+ CD4+ T cell subsets in the spleen. In traditional mouse models of SLE (NZB/W F1 and MRL/lpr), oral treatment with NIM-1324 protected against weight loss and proteinuria, decreased anti-dsDNA titers, and provided similar changes to the CD4+ T cell compartment in the spleen. The pharmacological activation of LANCL2 by NIM-1324 rescued hypocomplementemia, reduced kidney histopathological scores, and decreased blood IFN response genes and inflammatory cytokines. The loss of LANCL2 in phagocytes impairs phagosome processing, leading to increased uptake of material and inflammatory cytokine production, yet decreased markers of endosomal maturation, phagosome turnover, and lysozyme activity. Treatment with NIM-1324 increases metabolic and lysozyme activity in the phagosome, providing support for increased markers of early phagosome function. This efficacy translated to human PBMCs from patients with SLE, because ex vivo treatment with NIM-1324 resulted in reduced levels of IFN-α, IL-6, and IL-8. Consequently, the activation of LANCL2 effectively modulates CD4+ T cell differentiation and phagocyte activation, supporting immune tolerance in SLE., (Copyright © 2024 by The American Association of Immunologists, Inc.)
- Published
- 2024
- Full Text
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14. Treating Autoimmune Diseases With LANCL2 Therapeutics: A Novel Immunoregulatory Mechanism for Patients With Ulcerative Colitis and Crohn's Disease.
- Author
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Tubau-Juni N, Hontecillas R, Leber AJ, Alva SS, and Bassaganya-Riera J
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- Humans, Animals, Mice, T-Lymphocytes, Regulatory metabolism, Membrane Proteins metabolism, Phosphate-Binding Proteins, Colitis, Ulcerative drug therapy, Crohn Disease, Inflammatory Bowel Diseases drug therapy, Autoimmune Diseases
- Abstract
Lanthionine synthetase C-like 2 (LANCL2) therapeutics have gained increasing recognition as a novel treatment modality for a wide range of autoimmune diseases. Genetic ablation of LANCL2 in mice results in severe inflammatory phenotypes in inflammatory bowel disease (IBD) and lupus. Pharmacological activation of LANCL2 provides therapeutic efficacy in mouse models of intestinal inflammation, systemic lupus erythematosus, rheumatoid arthritis, multiple sclerosis, and psoriasis. Mechanistically, LANCL2 activation enhances regulatory CD4 + T cell (Treg) responses and downregulates effector responses in the gut. The stability and suppressive capacities of Treg cells are enhanced by LANCL2 activation through engagement of immunoregulatory mechanisms that favor mitochondrial metabolism and amplify IL-2/CD25 signaling. Omilancor, the most advanced LANCL2 immunoregulatory therapeutic in late-stage clinical development, is a phase 3 ready, first-in-class, gut-restricted, oral, once-daily, small-molecule therapeutic in clinical development for the treatment of UC and CD. In this review, we discuss this novel mechanism of mucosal immunoregulation and how LANCL2-targeting therapeutics could help address the unmet clinical needs of patients with autoimmune diseases, starting with IBD., (© The Author(s) 2023. Published by Oxford University Press on behalf of Crohn’s & Colitis Foundation. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2024
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- View/download PDF
15. Oral Omilancor Treatment Ameliorates Clostridioides difficile Infection During IBD Through Novel Immunoregulatory Mechanisms Mediated by LANCL2 Activation.
- Author
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Tubau-Juni N, Bassaganya-Riera J, Leber AJ, Alva SS, and Hontecillas R
- Subjects
- Humans, Animals, Mice, Anti-Bacterial Agents therapeutic use, Membrane Proteins, Phosphate-Binding Proteins, Clostridioides difficile, Inflammatory Bowel Diseases complications, Clostridium Infections microbiology, Crohn Disease drug therapy
- Abstract
Background: Clostridioides difficile infection (CDI) is an opportunistic infection of the gastrointestinal tract, commonly associated with antibiotic administration, that afflicts almost 500 000 people yearly only in the United States. CDI incidence and recurrence is increased in inflammatory bowel disease (IBD) patients. Omilancor is an oral, once daily, first-in-class, gut-restricted, immunoregulatory therapeutic in clinical development for the treatment of IBD., Methods: Acute and recurrent murine models of CDI and the dextran sulfate sodium-induced concomitant model of IBD and CDI were utilized to determine the therapeutic efficacy of oral omilancor. To evaluate the protective effects against C. difficile toxins, in vitro studies with T84 cells were also conducted. 16S sequencing was employed to characterize microbiome composition., Results: Activation of the LANCL2 pathway by oral omilancor and its downstream host immunoregulatory changes decreased disease severity and inflammation in the acute and recurrence models of CDI and the concomitant model of IBD/CDI. Immunologically, omilancor treatment increased mucosal regulatory T cell and decreased pathogenic T helper 17 cell responses. These immunological changes resulted in increased abundance and diversity of tolerogenic gut commensal bacterial strains in omilancor-treated mice. Oral omilancor also resulted in accelerated C. difficile clearance in an antimicrobial-free manner. Furthermore, omilancor provided protection from toxin damage, while preventing the metabolic burst observed in intoxicated epithelial cells., Conclusions: These data support the development of omilancor as a novel host-targeted, antimicrobial-free immunoregulatory therapeutic for the treatment of IBD patients with C. difficile-associated disease and pathology with the potential to address the unmet clinical needs of ulcerative colitis and Crohn's disease patients with concomitant CDI., (© The Author(s) 2023. Published by Oxford University Press on behalf of Crohn’s & Colitis Foundation. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2024
- Full Text
- View/download PDF
16. Modulation of colonic immunometabolic responses during Clostridioides difficile infection ameliorates disease severity and inflammation.
- Author
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Tubau-Juni N, Bassaganya-Riera J, Leber AJ, Alva SS, Baker R, and Hontecillas R
- Subjects
- Animals, Mice, Inflammation, Colon, Patient Acuity, Anti-Bacterial Agents, Clostridioides difficile, Clostridium Infections drug therapy
- Abstract
Clostridioides difficile infection (CDI) is the leading cause of antibiotic-associated diarrhea, and its clinical symptoms can span from asymptomatic colonization to pseudomembranous colitis and even death. The current standard of care for CDI is antibiotic treatment to achieve bacterial clearance; however, 15 to 35% of patients experience recurrence after initial response to antibiotics. We have conducted a comprehensive, global colonic transcriptomics analysis of a 10-day study in mice to provide new insights on the local host response during CDI and identify novel host metabolic mechanisms with therapeutic potential. The analysis indicates major alterations of colonic gene expression kinetics at the acute infection stage, that are restored during the recovery phase. At the metabolic level, we observe a biphasic response pattern characterized by upregulated glycolytic metabolism during the peak of inflammation, while mitochondrial metabolism predominates during the recovery/healing stage. Inhibition of glycolysis via 2-Deoxy-D-glucose (2-DG) administration during CDI decreases disease severity, protects from mortality, and ameliorates colitis in vivo. Additionally, 2-DG also protects intestinal epithelial cells from C. difficile toxin damage, preventing loss of barrier integrity and secretion of proinflammatory mediators. These data postulate the pharmacological targeting of host immunometabolic pathways as novel treatment modalities for CDI., (© 2023. Springer Nature Limited.)
- Published
- 2023
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17. Correction to: Efficacy, Safety, and Tolerability of Omilancor in a Phase 2 Randomized, Double-Blind, Placebo-Controlled Trial of Patients With Ulcerative Colitis.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, Lichtiger S, and Bassaganya-Riera J
- Published
- 2022
- Full Text
- View/download PDF
18. Computational modeling of complex bioenergetic mechanisms that modulate CD4+ T cell effector and regulatory functions.
- Author
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Baker R, Hontecillas R, Tubau-Juni N, Leber AJ, Kale S, and Bassaganya-Riera J
- Subjects
- Computer Simulation, Energy Metabolism, CD4-Positive T-Lymphocytes, T-Lymphocytes, Regulatory metabolism
- Abstract
We built a computational model of complex mechanisms at the intersection of immunity and metabolism that regulate CD4+ T cell effector and regulatory functions by using coupled ordinary differential equations. The model provides an improved understanding of how CD4+ T cells are shaping the immune response during Clostridioides difficile infection (CDI), and how they may be targeted pharmacologically to produce a more robust regulatory (Treg) response, which is associated with improved disease outcomes during CDI and other diseases. LANCL2 activation during CDI decreased the effector response, increased regulatory response, and elicited metabolic changes that favored Treg. Interestingly, LANCL2 activation provided greater immune and metabolic modulation compared to the addition of exogenous IL-2. Additionally, we identified gluconeogenesis via PEPCK-M as potentially responsible for increased immunosuppressive behavior in Treg cells. The model can perturb immune signaling and metabolism within a CD4+ T cell and obtain clinically relevant outcomes that help identify novel drug targets for infectious, autoimmune, metabolic, and neurodegenerative diseases., (© 2022. The Author(s).)
- Published
- 2022
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19. Regulation of thermoregulatory behavior by commensal bacteria in Drosophila.
- Author
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Suito T, Nagao K, Juni N, Hara Y, Sokabe T, Atomi H, and Umeda M
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- Animals, Bacteria, Body Temperature Regulation, Larva physiology, Symbiosis, Drosophila, Drosophila melanogaster microbiology, Drosophila melanogaster physiology
- Abstract
Commensal bacteria affect many aspects of host physiology. In this study, we focused on the role of commensal bacteria in the thermoregulatory behavior of Drosophila melanogaster. We demonstrated that the elimination of commensal bacteria caused an increase in the preferred temperature of Drosophila third-instar larvae without affecting the activity of transient receptor potential ankyrin 1 (TRPA1)-expressing thermosensitive neurons. We isolated eight bacterial strains from the gut and culture medium of conventionally reared larvae and found that the preferred temperature of the larvae was decreased by mono-association with Lactobacillus plantarum or Corynebacterium nuruki. Mono-association with these bacteria did not affect the indices of energy metabolism such as ATP and glucose levels of larvae, which are closely linked to thermoregulation in animals. Thus, we show a novel role for commensal bacteria in host thermoregulation and identify two bacterial species that affect thermoregulatory behavior in Drosophila., (© The Author(s) 2022. Published by Oxford University Press on behalf of Japan Society for Bioscience, Biotechnology, and Agrochemistry.)
- Published
- 2022
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- View/download PDF
20. WITHDRAWN: EFFICACY, SAFETY, AND TOLERABILITY OF OMILANCOR IN A PHASE 2 RANDOMIZED, DOUBLE-BLIND, PLACEBO-CONTROLLED TRIAL OF PATIENTS WITH ULCERATIVE COLITIS.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, Lichtiger S, and Bassaganya-Riera J
- Abstract
Background: Omilancor is an oral, once-daily, gut-restricted, small molecule, first-in-class therapeutic for Crohn's disease (CD) and ulcerative colitis (UC) that targets the novel LANCL2 pathway. Through LANCL2 activation, omilancor increases the suppressive capacity of regulatory immune cells, including regulatory CD4+ T cells (Tregs), locally within the intestinal mucosa. In a Phase I study in normal healthy volunteers no changes in AEs or trends in safety laboratory trends were observed up to daily oral doses of 7500 mg/day., Methods: In a Phase 2, proof of concept, double blind, parallel-group study, adult patients with Mayo Clinic scores (MCS) of 4 - 10 and endoscopic subscores of 2 or more were randomly assigned to groups given omilancor 440 mg QD (n=66), omilancor 880 mg QD (n=66) or placebo (n=66) for 12 weeks. The primary endpoint was clinical remission after 12 weeks as defined by rectal bleeding (RB) equal to 0, stool frequency (SF) equal to 0 or 1 and endoscopic appearance (MES) equal to 0 or 1. A modified intent to treat (mITT) population was defined by patients with RB > 0, histological activity and elevated fecal calprotectin (FCP) at baseline. Secondary endpoints included histological remission as defined by a Geboes score < 3.1 with absence of neutrophils in the lamina propria, endoscopic remission as defined by a MES < 2, normalization of FCP and pharmacokinetics (PK) of omilancor in stool, tissue and plasma., Results: Oral omilancor was well tolerated with no trends in AE profile observed and most AEs of mild severity and no dose-limiting toxicities. In the mITT population, clinical remission was induced in 30.4% of omilancor treated patients relative to 3.7% of patients given placebo (Δ = 26.7, p = 0.01), thereby meeting the primary endpoint. Endoscopic remission was induced in 41.7% of patients treated with omilancor relative to 18.6% of patients given placebo (Δ = 23.1, p = 0.07). Histological remission was induced in 41.7% of patients treated with omilancor relative to 22.2% of patients given placebo (Δ = 19.5, p = 0.14). In patients with elevated baseline FCP, normalization occurred in 43.8% of the omilancor 880 mg group and 40.6% of the omilancor 440 mg group relative to 21.4% of the placebo group after 2 weeks (p = 0.048). PK analysis validated a gut-restricted profile with stable drug levels in stool over the 12-week treatment period and penetration into colonic biopsy tissue with limited systemic exposure. Reduction of patient reported outcomes occurred during the OLE with nearly 90% of patients reaching SF ≤ 1 and RB = 0 after 36 weeks of open-label treatment., Conclusions: Once a day oral dosing with omilancor was well-tolerated and induced clinical remission in a Phase II mild to moderate UC population. A Phase II study in CD and a Phase III program in UC (PACIFY) were initiated in 2021 and are currently recruiting., (© 2022 by the Crohn’s & Colitis Foundation and the AGA Institute. This article is being published jointly in Inflammatory Bowel Diseases and Gastroenterology.)
- Published
- 2022
- Full Text
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21. Nlrx1-Regulated Defense and Metabolic Responses to Aspergillus fumigatus Are Morphotype and Cell Type Specific.
- Author
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Kastelberg B, Ayubi T, Tubau-Juni N, Leber A, Hontecillas R, Bassaganya-Riera J, and Kale SD
- Subjects
- Animals, Aspergillosis, Cell Line, Epithelial Cells metabolism, Epithelial Cells microbiology, Glycolysis, Humans, Hyphae, Macrophages metabolism, Macrophages microbiology, Male, Mice, Knockout, Mitochondria metabolism, Mitochondrial Proteins genetics, Neutrophils metabolism, Neutrophils microbiology, Oxidative Stress, Reactive Oxygen Species metabolism, Spores, Fungal, Mice, Aspergillus fumigatus, Mitochondrial Proteins metabolism
- Abstract
The Nlr family member X1 (Nlrx1) is an immuno-metabolic hub involved in mediating effective responses to virus, bacteria, fungi, cancer, and auto-immune diseases. We have previously shown that Nlrx1 is a critical regulator of immune signaling and mortality in several models of pulmonary fungal infection using the clinically relevant fungus Aspergillus fumigatus . In the absence of Nlrx1, hosts produce an enhanced Th2 response primarily by CD103+ dendritic cell populations resulting in enhanced mortality via immunopathogenesis as well as enhanced fungal burden. Here, we present our subsequent efforts showcasing loss of Nlrx1 resulting in a decreased ability of host cells to process A. fumigatus conidia in a cell-type-specific manner by BEAS-2B airway epithelial cells, alveolar macrophages, bone marrow-derived macrophages, but not bone marrow-derived neutrophils. Furthermore, loss of Nlrx1 results in a diminished ability to generate superoxide and/or generic reactive oxygen species during specific responses to fungal PAMPs, conidia, and hyphae. Analysis of glycolysis and mitochondrial function suggests that Nlrx1 is needed to appropriately shut down glycolysis in response to A. fumigatus conidia and increase glycolysis in response to hyphae in BEAS-2B cells. Blocking glycolysis and pentose phosphate pathway (PPP) via 2-DG and NADPH production through glucose-6-phosphate dehydrogenase inhibitor resulted in significantly diminished conidial processing in wild-type BEAS-2B cells to the levels of Nlrx1-deficient BEAS-2B cells. Our findings suggest a need for airway epithelial cells to generate NADPH for reactive oxygen species production in response to conidia via PPP. In context to fungal pulmonary infections, our results show that Nlrx1 plays significant roles in host defense via PPP modulation of several aspects of metabolism, particularly glycolysis, to facilitate conidia processing in addition to its critical role in regulating immune signaling., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Kastelberg, Ayubi, Tubau-Juni, Leber, Hontecillas, Bassaganya-Riera and Kale.)
- Published
- 2021
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22. First-in-class topical therapeutic omilancor ameliorates disease severity and inflammation through activation of LANCL2 pathway in psoriasis.
- Author
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Tubau-Juni N, Hontecillas R, Leber A, Maturavongsadit P, Chauhan J, and Bassaganya-Riera J
- Subjects
- Administration, Topical, Animals, Anti-Inflammatory Agents administration & dosage, Cytokines metabolism, Disease Models, Animal, Disease Susceptibility, Imiquimod adverse effects, Immunosuppressive Agents administration & dosage, Inflammation Mediators, Keratinocytes drug effects, Keratinocytes immunology, Keratinocytes metabolism, Membrane Proteins agonists, Mice, Mice, Knockout, Phosphate-Binding Proteins agonists, Psoriasis drug therapy, Psoriasis etiology, Psoriasis pathology, T-Lymphocyte Subsets drug effects, T-Lymphocyte Subsets immunology, T-Lymphocyte Subsets metabolism, Anti-Inflammatory Agents pharmacology, Immunosuppressive Agents pharmacology, Membrane Proteins metabolism, Phosphate-Binding Proteins metabolism, Psoriasis metabolism, Signal Transduction drug effects
- Abstract
Psoriasis (PsO) is a complex immune-mediated disease that afflicts 100 million people. Omilancor is a locally-acting, small molecule that selectively activates the Lanthionine Synthetase C-like 2 (LANCL2) pathway, resulting in immunoregulatory effects at the intersection of immunity and metabolism. Topical omilancor treatment in an imiquimod-induced mouse model of PsO ameliorates disease severity, epidermal hyperplasia and acanthosis. Further, pharmacological activation of LANCL2 results in significant downregulation of proinflammatory markers including local reduction of IL17, and infiltration of proinflammatory cell subsets. These therapeutic effects were further validated in an IL-23 PsO model. This model reported increased preservation of homeostatic skin structure, accompanied by a decreased infiltration of proinflammatory T cell subsets. In CD4+ T cells and Th17 cells, the LANCL2 pathway regulates proinflammatory cytokine production, proliferation and glucose metabolism. Metabolically, the loss of Lancl2 resulted in increased glycolytic rates, lactate production and upregulated enzymatic activity of hexokinase and lactate dehydrogenase (LDH). Inhibition of LDH activity abrogated the increased proliferation rate in Lancl2
-/- CD4+ T cells. Additionally, topical omilancor treatment decreased the metabolic upregulation in keratinocytes, keratinocyte hyperproliferation and expression of inflammatory markers. Omilancor is a promising topical, LANCL2-targeting therapeutic candidate for the treatment of PsO and other dermatology indications., (© 2021. The Author(s).)- Published
- 2021
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23. Extreme deformability of insect cell membranes is governed by phospholipid scrambling.
- Author
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Shiomi A, Nagao K, Yokota N, Tsuchiya M, Kato U, Juni N, Hara Y, Mori MX, Mori Y, Ui-Tei K, Murate M, Kobayashi T, Nishino Y, Miyazawa A, Yamamoto A, Suzuki R, Kaufmann S, Tanaka M, Tatsumi K, Nakabe K, Shintaku H, Yesylevsky S, Bogdanov M, and Umeda M
- Subjects
- Animals, Drosophila, Insecta, Cell Membrane metabolism, Phospholipid Transfer Proteins metabolism
- Abstract
Organization of dynamic cellular structure is crucial for a variety of cellular functions. In this study, we report that Drosophila and Aedes have highly elastic cell membranes with extremely low membrane tension and high resistance to mechanical stress. In contrast to other eukaryotic cells, phospholipids are symmetrically distributed between the bilayer leaflets of the insect plasma membrane, where phospholipid scramblase (XKR) that disrupts the lipid asymmetry is constitutively active. We also demonstrate that XKR-facilitated phospholipid scrambling promotes the deformability of cell membranes by regulating both actin cortex dynamics and mechanical properties of the phospholipid bilayer. Moreover, XKR-mediated construction of elastic cell membranes is essential for hemocyte circulation in the Drosophila cardiovascular system. Deformation of mammalian cells is also enhanced by the expression of Aedes XKR, and thus phospholipid scrambling may contribute to formation of highly deformable cell membranes in a variety of living eukaryotic cells., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2021
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24. NLRX1 is a key regulator of immune signaling during invasive pulmonary aspergillosis.
- Author
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Kastelberg B, Tubau-Juni N, Ayubi T, Leung A, Leber A, Hontecillas R, Bassaganya-Riera J, and Kale SD
- Subjects
- Animals, Cell Line, Cytokines genetics, Cytokines immunology, MAP Kinase Kinase 4 genetics, MAP Kinase Kinase 4 immunology, MAP Kinase Signaling System genetics, Mice, Mice, Knockout, Mitochondrial Proteins genetics, Neutrophils immunology, Neutrophils pathology, Pulmonary Aspergillosis genetics, Pulmonary Aspergillosis pathology, Th2 Cells pathology, Transcription Factors genetics, Transcription Factors immunology, p38 Mitogen-Activated Protein Kinases genetics, p38 Mitogen-Activated Protein Kinases immunology, Aspergillus fumigatus immunology, Dendritic Cells immunology, MAP Kinase Signaling System immunology, Mitochondrial Proteins immunology, Pulmonary Aspergillosis immunology, Th2 Cells immunology
- Abstract
Aspergillus fumigatus is an opportunistic fungal pathogen of immunocompromised patient populations. Mortality is thought to be context-specific and occurs via both enhanced fungal growth and immunopathogenesis. NLRX1 is a negative regulator of immune signaling and metabolic pathways implicated in host responses to microbes, cancers, and autoimmune diseases. Our study indicates loss of Nlrx1 results in enhanced fungal burden, pulmonary inflammation, immune cell recruitment, and mortality across immuno-suppressed and immuno-competent models of IPA using two clinically derived isolates (AF293, CEA10). We observed that the heightened mortality is due to enhanced recruitment of CD103+ dendritic cells (DCs) that produce elevated amounts of IL-4 resulting in a detrimental Th2-mediated immune response. Adoptive transfer of Nlrx1-/- CD103+ DCs in neutropenic NRG mice results in enhanced mortality that can be ablated using IL-4 neutralizing antibodies. In vitro analysis of CD103+ DCs indicates loss of Nlrx1 results in enhanced IL-4 production via elevated activation of the JNK/JunB pathways. Interestingly, loss of Nlrx1 also results in enhanced recruitment of monocytes and neutrophils. Chimeras of irradiated Nlrx1-/- mice reconstituted with wild type bone marrow have enhanced neutrophil recruitment and survival during models of IPA. This enhanced immune cell recruitment in the absence of Nlrx1 is mediated by excessive production of CXCL8/IL-8 family of chemokines and IL-6 via early and enhanced activation of P38 in response to A. fumigatus conidia as shown in BEAS-2B airway epithelial cells. In summary, our results point strongly towards the cell-specific and contextual function of Nlrx1 during invasive pulmonary aspergillosis and may lead to novel therapeutics to reduce Th2 responses by CD103+ DCs or heightened recruitment of neutrophils., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2020
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25. Functional expression of Δ12 fatty acid desaturase modulates thermoregulatory behaviour in Drosophila.
- Author
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Suito T, Nagao K, Takeuchi K, Juni N, Hara Y, and Umeda M
- Subjects
- Acclimatization, Animals, Animals, Genetically Modified, Fatty Acid Desaturases metabolism, Fatty Acids metabolism, Neurons metabolism, Phospholipids, TRPA1 Cation Channel genetics, TRPA1 Cation Channel metabolism, Body Temperature Regulation, Caenorhabditis elegans Proteins genetics, Drosophila physiology, Fatty Acid Desaturases genetics, Gene Expression, Sequence Deletion
- Abstract
Polyunsaturated fatty acids (PUFAs) play crucial roles in adaptation to cold environments in a wide variety of animals and plants. However, the mechanisms by which PUFAs affect thermoregulatory behaviour remain elusive. Thus, we investigated the roles of PUFAs in thermoregulatory behaviour of Drosophila melanogaster. To this end, we generated transgenic flies expressing Caenorhabditis elegans Δ12 fatty acid desaturase (FAT-2), which converts mono-unsaturated fatty acids to PUFAs such as linoleic acid [C18:2 (n-6)] and linolenic acid [C18:3 (n-3)]. Neuron-specific expression of FAT-2 using the GAL4/UAS expression system led to increased contents of C18:2 (n-6)-containing phospholipids in central nerve system (CNS) and caused significant decreases in preferred temperature of third instar larvae. In genetic screening and calcium imaging analyses of thermoreceptor-expressing neurons, we demonstrated that ectopic expression of FAT-2 in TRPA1-expressing neurons led to decreases in preferred temperature by modulating neuronal activity. We conclude that functional expression of FAT-2 in a subset of neurons changes the thermoregulatory behaviour of D. melanogaster, likely by modulating quantities of PUFA-containing phospholipids in neuronal cell membranes.
- Published
- 2020
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26. Identification of new regulatory genes through expression pattern analysis of a global RNA-seq dataset from a Helicobacter pylori co-culture system.
- Author
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Tubau-Juni N, Bassaganya-Riera J, Leber A, Zoccoli-Rodriguez V, Kronsteiner B, Viladomiu M, Abedi V, Philipson CW, and Hontecillas R
- Subjects
- Animals, Coculture Techniques, Computer Simulation, Gastric Mucosa microbiology, Gastric Mucosa pathology, Helicobacter Infections microbiology, Helicobacter Infections pathology, Helicobacter pylori pathogenicity, Humans, Macrophages microbiology, Mice, RNA-Seq, Receptors, Cell Surface genetics, Genes, Regulator genetics, Helicobacter Infections genetics, Helicobacter pylori genetics, Macrophages metabolism
- Abstract
Helicobacter pylori is a gram-negative bacterium that persistently colonizes the human stomach by inducing immunoregulatory responses. We have used a novel platform that integrates a bone marrow-derived macrophage and live H. pylori co-culture with global time-course transcriptomics analysis to identify new regulatory genes based on expression patterns resembling those of genes with known regulatory function. We have used filtering criteria based on cellular location and novelty parameters to select 5 top lead candidate targets. Of these, Plexin domain containing 2 (Plxdc2) was selected as the top lead immunoregulatory target. Loss of function studies with in vivo models of H. pylori infection as well as a chemically-induced model of colitis, confirmed its predicted regulatory function and significant impact on modulation of the host immune response. Our integrated bioinformatics analyses and experimental validation platform has enabled the discovery of new immunoregulatory genes. This pipeline can be used for the identification of genes with therapeutic applications for treating infectious, inflammatory, and autoimmune diseases.
- Published
- 2020
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27. Abscisic acid enriched fig extract promotes insulin sensitivity by decreasing systemic inflammation and activating LANCL2 in skeletal muscle.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, Zoccoli-Rodriguez V, Goodpaster B, and Bassaganya-Riera J
- Subjects
- Animals, Blood Glucose drug effects, Blood Glucose metabolism, Diabetes Mellitus, Type 2 metabolism, Disease Models, Animal, Glucose metabolism, Humans, Inflammation metabolism, Insulin metabolism, Mice, Mice, Inbred NOD, Mitochondria drug effects, Mitochondria metabolism, Muscle Cells drug effects, Muscle Cells metabolism, Muscle, Skeletal metabolism, Obesity metabolism, Abscisic Acid pharmacology, Ficus chemistry, Inflammation drug therapy, Insulin Resistance physiology, Membrane Proteins metabolism, Muscle, Skeletal drug effects, Phosphate-Binding Proteins metabolism, Plant Extracts pharmacology
- Abstract
Abscisic acid is a phytohormone found in fruits and vegetables and is endogenously produced in mammals. In humans and mice, lanthionine synthetase C-like 2 (LANCL2) has been characterized as the natural receptor for ABA. Herein, we characterize the efficacy of a fig fruit extract of ABA in promoting glycemic control. This ABA-enriched extract, at 0.125 µg ABA/kg body weight, improves glucose tolerance, insulin sensitivity and fasting blood glucose in diet-induced obesity (DIO) and db/db mouse models. In addition to decreasing systemic inflammation and providing glycemic control without increasing insulin, ABA extract modulates the metabolic activity of muscle. ABA increases expression of important glycogen synthase, glucose, fatty acid and mitochondrial metabolism genes and increases direct measures of fatty acid oxidation, glucose oxidation and metabolic flexibility in soleus muscle cells from ABA-treated mice with DIO. Glycolytic and mitochondrial ATP production were increased in ABA-treated human myotubes. Further, ABA synergized with insulin to dramatically increase the rate of glycogen synthesis. The loss of LANCL2 in skeletal muscle abrogated the effect of ABA extract in the DIO model and increased fasting blood glucose levels. This data further supports the clinical development of ABA in the treatment of pre-diabetes, type 2 diabetes and metabolic syndrome.
- Published
- 2020
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28. Different mechanisms for selective transport of fatty acids using a single class of lipoprotein in Drosophila .
- Author
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Matsuo N, Nagao K, Suito T, Juni N, Kato U, Hara Y, and Umeda M
- Subjects
- Animals, Drosophila, Fatty Acids metabolism, Fatty Acids, Omega-3 metabolism, Fatty Acids, Unsaturated metabolism, Lipoproteins metabolism, Phospholipids metabolism, Diglycerides metabolism, Drosophila Proteins metabolism, Receptors, Lipoprotein metabolism
- Abstract
In mammals, lipids are selectively transported to specific sites using multiple classes of lipoproteins. However, in Drosophila , a single class of lipoproteins, lipophorin, carries more than 95% of the lipids in the hemolymph. Although a unique ability of the insect lipoprotein system for cargo transport has been demonstrated, it remains unclear how this single class of lipoproteins selectively transports lipids. In this study, we carried out a comparative analysis of the fatty-acid composition among lipophorin, the CNS, and CNS-derived cell lines and investigated the transport mechanism of fatty acids, particularly focusing on the transport of PUFAs in Drosophila We showed that PUFAs are selectively incorporated into the acyl chains of lipophorin phospholipids and effectively transported to CNS through lipophorin receptor-mediated endocytosis of lipophorin. In addition, we demonstrated that C14 fatty acids are selectively incorporated into the diacylglycerols (DAGs) of lipophorin and that C14 fatty-acid-containing DAGs are spontaneously transferred from lipophorin to the phospholipid bilayer. These results suggest that PUFA-containing phospholipids and C14 fatty-acid-containing DAGs in lipophorin could be transferred to different sites by different mechanisms to selectively transport fatty acids using a single class of lipoproteins., (Copyright © 2019 Matsuo et al.)
- Published
- 2019
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29. High-resolution computational modeling of immune responses in the gut.
- Author
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Verma M, Bassaganya-Riera J, Leber A, Tubau-Juni N, Hoops S, Abedi V, Chen X, and Hontecillas R
- Subjects
- Animals, Cell Proliferation, Gastrointestinal Tract physiology, Helicobacter pylori, Mice, Computer Simulation, Epithelial Cells physiology, Gastrointestinal Tract immunology, Helicobacter Infections immunology, Immune System immunology, Models, Biological
- Abstract
Background: Helicobacter pylori causes gastric cancer in 1-2% of cases but is also beneficial for protection against allergies and gastroesophageal diseases. An estimated 85% of H. pylori-colonized individuals experience no detrimental effects. To study the mechanisms promoting host tolerance to the bacterium in the gastrointestinal mucosa and systemic regulatory effects, we investigated the dynamics of immunoregulatory mechanisms triggered by H. pylori using a high-performance computing-driven ENteric Immunity SImulator multiscale model. Immune responses were simulated by integrating an agent-based model, ordinary, and partial differential equations., Results: The outputs were analyzed using 2 sequential stages: the first used a partial rank correlation coefficient regression-based and the second a metamodel-based global sensitivity analysis. The influential parameters screened from the first stage were selected to be varied for the second stage. The outputs from both stages were combined as a training dataset to build a spatiotemporal metamodel. The Sobol indices measured time-varying impact of input parameters during initiation, peak, and chronic phases of infection. The study identified epithelial cell proliferation and epithelial cell death as key parameters that control infection outcomes. In silico validation showed that colonization with H. pylori decreased with a decrease in epithelial cell proliferation, which was linked to regulatory macrophages and tolerogenic dendritic cells., Conclusions: The hybrid model of H. pylori infection identified epithelial cell proliferation as a key factor for successful colonization of the gastric niche and highlighted the role of tolerogenic dendritic cells and regulatory macrophages in modulating the host responses and shaping infection outcomes., (© The Author(s) 2019. Published by Oxford University Press.)
- Published
- 2019
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30. Challenges in Personalized Nutrition and Health.
- Author
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Verma M, Hontecillas R, Tubau-Juni N, Abedi V, and Bassaganya-Riera J
- Published
- 2018
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31. NLRX1 Modulates Immunometabolic Mechanisms Controlling the Host-Gut Microbiota Interactions during Inflammatory Bowel Disease.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, Zoccoli-Rodriguez V, Abedi V, and Bassaganya-Riera J
- Subjects
- Animals, Cells, Cultured, Colitis chemically induced, Colitis immunology, Dextran Sulfate, Dietary Supplements, Disease Models, Animal, Glutamine administration & dosage, Humans, Immunity, Innate, Inflammatory Bowel Diseases immunology, Mice, Mice, Inbred C57BL, Mice, Knockout, Mitochondrial Proteins genetics, Clostridiales physiology, Colitis metabolism, Epithelial Cells physiology, Gastrointestinal Microbiome immunology, Inflammation immunology, Inflammatory Bowel Diseases metabolism, Mitochondrial Proteins metabolism, Veillonella physiology
- Abstract
Interactions among the gut microbiome, dysregulated immune responses, and genetic factors contribute to the pathogenesis of inflammatory bowel disease (IBD). Nlrx1
-/- mice have exacerbated disease severity, colonic lesions, and increased inflammatory markers. Global transcriptomic analyses demonstrate enhanced mucosal antimicrobial defense response, chemokine and cytokine expression, and epithelial cell metabolism in colitic Nlrx1-/- mice compared to wild-type (WT) mice. Cell-specificity studies using cre-lox mice demonstrate that the loss of NLRX1 in intestinal epithelial cells (IEC) recapitulate the increased sensitivity to DSS colitis observed in whole body Nlrx1-/- mice. Further, organoid cultures of Nlrx1-/- and WT epithelial cells confirm the altered patterns of proliferation, amino acid metabolism, and tight junction expression. These differences in IEC behavior can impact the composition of the microbiome. Microbiome analyses demonstrate that colitogenic bacterial taxa such as Veillonella and Clostridiales are increased in abundance in Nlrx1-/- mice and in WT mice co-housed with Nlrx1-/- mice. The transfer of an Nlrx1-/- -associated gut microbiome through co-housing worsens disease in WT mice confirming the contributions of the microbiome to the Nlrx1-/- phenotype. To validate NLRX1 effects on IEC metabolism mediate gut-microbiome interactions, restoration of WT glutamine metabolic profiles through either exogenous glutamine supplementation or administration of 6-diazo-5-oxo-l-norleucine abrogates differences in inflammation, microbiome, and overall disease severity in Nlrx1-/- mice. The influence NLRX1 deficiency on SIRT1-mediated effects is identified to be an upstream controller of the Nlrx1-/- phenotype in intestinal epithelial cell function and metabolism. The altered IEC function and metabolisms leads to changes in barrier permeability and microbiome interactions, in turn, promoting greater translocation and inflammation and resulting in an increased disease severity. In conclusion, NLRX1 is an immunoregulatory molecule and a candidate modulator of the interplay between mucosal inflammation, metabolism, and the gut microbiome during IBD.- Published
- 2018
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32. Severe Fertility Effects of sheepish Sperm Caused by Failure To Enter Female Sperm Storage Organs in Drosophila melanogaster .
- Author
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Tomaru M, Ohsako T, Watanabe M, Juni N, Matsubayashi H, Sato H, Takahashi A, and Yamamoto MT
- Subjects
- Animal Structures cytology, Animal Structures metabolism, Animals, Clutch Size, Copulation, Drosophila Proteins deficiency, Drosophila melanogaster growth & development, Female, Fertility, Gene Expression, Genetic Complementation Test, Male, Oxidoreductases Acting on CH-NH Group Donors deficiency, Sperm Count, Sperm Motility, Spermatozoa pathology, Drosophila Proteins genetics, Drosophila melanogaster genetics, Fertilization genetics, Oxidoreductases Acting on CH-NH Group Donors genetics, Spermatozoa metabolism
- Abstract
In Drosophila , mature sperm are transferred from males to females during copulation, stored in the sperm storage organs of females, and then utilized for fertilization. Here, we report a gene named sheepish ( shps ) of Drosophila melanogaster that is essential for sperm storage in females. shps mutant males, although producing morphologically normal and motile sperm that are effectively transferred to females, produce very few offspring. Direct counts of sperm indicated that the primary defect was correlated to failure of shps sperm to migrate into the female sperm storage organs. Increased sperm motion parameters were seen in the control after transfer to females, whereas sperm from shps males have characteristics of the motion parameters different from the control. The few sperm that occasionally entered the female sperm storage organs showed no obvious defects in fertilization and early embryo development. The female postmating responses after copulation with shps males appeared normal, at least with respect to conformational changes of uterus, mating plug formation, and female remating rates. The shps gene encodes a protein with homology to amine oxidases, including as observed in mammals, with a transmembrane region at the C-terminal end. The shps mutation was characterized by a nonsense replacement in the third exon of CG13611 , and shps was rescued by transformants of the wild-type copy of CG13611 Thus, shps may define a new class of gene responsible for sperm storage., (Copyright © 2018 Tomaru et al.)
- Published
- 2018
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33. An N-terminal di-proline motif is essential for fatty acid-dependent degradation of Δ9-desaturase in Drosophila .
- Author
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Murakami A, Nagao K, Juni N, Hara Y, and Umeda M
- Subjects
- Animals, Gene Expression Regulation, Enzymologic, Mice, Amino Acid Motifs physiology, Drosophila Proteins metabolism, Drosophila melanogaster enzymology, Fatty Acid Desaturases metabolism, Fatty Acids, Unsaturated metabolism, Proline chemistry, Proteolysis
- Abstract
The Δ9-fatty acid desaturase introduces a double bond at the Δ9 position of the acyl moiety of acyl-CoA and regulates the cellular levels of unsaturated fatty acids. However, it is unclear how Δ9-desaturase expression is regulated in response to changes in the levels of fatty acid desaturation. In this study, we found that the degradation of DESAT1, the sole Δ9-desaturase in the Drosophila cell line S2, was significantly enhanced when the amounts of unsaturated acyl chains of membrane phospholipids were increased by supplementation with unsaturated fatty acids, such as oleic and linoleic acids. In contrast, inhibition of DESAT1 activity remarkably suppressed its degradation. Of note, removal of the DESAT1 N-terminal domain abolished the responsiveness of DESAT1 degradation to the level of fatty acid unsaturation. Further truncation and amino acid replacement analyses revealed that two sequential prolines, the second and third residues of DESAT1, were responsible for the unsaturated fatty acid-dependent degradation. Although degradation of mouse stearoyl-CoA desaturase 1 (SCD1) was unaffected by changes in fatty acid unsaturation, introduction of the N-terminal sequential proline residues into SCD1 conferred responsiveness to unsaturated fatty acid-dependent degradation. Furthermore, we also found that the Ca
2+ -dependent cysteine protease calpain is involved in the sequential proline-dependent degradation of DESAT1. In light of these findings, we designated the sequential prolines at the second and third positions of DESAT1 as a "di-proline motif," which plays a crucial role in the regulation of Δ9-desaturase expression in response to changes in the level of cellular unsaturated fatty acids., (© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.)- Published
- 2017
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34. Modulation of Immune Signaling and Metabolism Highlights Host and Fungal Transcriptional Responses in Mouse Models of Invasive Pulmonary Aspergillosis.
- Author
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Kale SD, Ayubi T, Chung D, Tubau-Juni N, Leber A, Dang HX, Karyala S, Hontecillas R, Lawrence CB, Cramer RA, and Bassaganya-Riera J
- Subjects
- Animals, Anti-Inflammatory Agents therapeutic use, Aspergillosis drug therapy, Aspergillosis immunology, Aspergillosis metabolism, Aspergillus fumigatus genetics, Aspergillus fumigatus metabolism, Aspergillus fumigatus pathogenicity, CD4-Positive T-Lymphocytes cytology, CD4-Positive T-Lymphocytes immunology, CD4-Positive T-Lymphocytes metabolism, Cell Differentiation, Cytokines metabolism, Disease Models, Animal, Fungal Proteins genetics, Gene Expression Regulation, Lung microbiology, Mice, Principal Component Analysis, Signal Transduction, Steroids therapeutic use, Triamcinolone therapeutic use, Aspergillosis pathology, Fungal Proteins metabolism, Host-Pathogen Interactions genetics, Lung metabolism
- Abstract
Incidences of invasive pulmonary aspergillosis, an infection caused predominantly by Aspergillus fumigatus, have increased due to the growing number of immunocompromised individuals. While A. fumigatus is reliant upon deficiencies in the host to facilitate invasive disease, the distinct mechanisms that govern the host-pathogen interaction remain enigmatic, particularly in the context of distinct immune modulating therapies. To gain insights into these mechanisms, RNA-Seq technology was utilized to sequence RNA derived from lungs of 2 clinically relevant, but immunologically distinct murine models of IPA on days 2 and 3 post inoculation when infection is established and active disease present. Our findings identify notable differences in host gene expression between the chemotherapeutic and steroid models at the interface of immunity and metabolism. RT-qPCR verified model specific and nonspecific expression of 23 immune-associated genes. Deep sequencing facilitated identification of highly expressed fungal genes. We utilized sequence similarity and gene expression to categorize the A. fumigatus putative in vivo secretome. RT-qPCR suggests model specific gene expression for nine putative fungal secreted proteins. Our analysis identifies contrasting responses by the host and fungus from day 2 to 3 between the two models. These differences may help tailor the identification, development, and deployment of host- and/or fungal-targeted therapeutics.
- Published
- 2017
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35. Abscisic Acid: A Novel Nutraceutical for Glycemic Control.
- Author
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Zocchi E, Hontecillas R, Leber A, Einerhand A, Carbo A, Bruzzone S, Tubau-Juni N, Philipson N, Zoccoli-Rodriguez V, Sturla L, and Bassaganya-Riera J
- Abstract
Abscisic acid is naturally present in fruits and vegetables, and it plays an important role in managing glucose homeostasis in humans. According to the latest U.S. dietary survey, about 92% of the population might have a deficient intake of ABA due to their deficient intake of fruits and vegetables. This review summarizes the in vitro , preclinical, mechanistic, and human translational findings obtained over the past 15 years in the study of the role of ABA in glycemic control. In 2007, dietary ABA was first reported to ameliorate glucose tolerance and obesity-related inflammation in mice. The most recent findings regarding the topic of ABA and its proposed receptor lanthionine synthetase C-like 2 in glycemic control and their interplay with insulin and glucagon-like peptide-1 suggest a major role for ABA in the physiological response to a glucose load in humans. Moreover, emerging evidence suggests that the ABA response might be dysfunctional in diabetic subjects. Follow on intervention studies in healthy individuals show that low-dose dietary ABA administration exerts a beneficial effect on the glycemia and insulinemia profiles after oral glucose load. These recent findings showing benefits in humans, together with extensive efficacy data in mouse models of diabetes and inflammatory disease, suggest the need for reference ABA values and its possible exploitation of the glycemia-lowering effects of ABA for preventative purposes. Larger clinical studies on healthy, prediabetic, and diabetic subjects are needed to determine whether addressing the widespread dietary ABA deficiency improves glucose control in humans.
- Published
- 2017
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36. Modeling new immunoregulatory therapeutics as antimicrobial alternatives for treating Clostridium difficile infection.
- Author
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Leber A, Hontecillas R, Abedi V, Tubau-Juni N, Zoccoli-Rodriguez V, Stewart C, and Bassaganya-Riera J
- Subjects
- Animals, Anti-Bacterial Agents therapeutic use, Anti-Infective Agents, Computer Simulation, Microbiota, Clostridioides difficile, Clostridium Infections therapy, Fecal Microbiota Transplantation
- Abstract
The current treatment paradigm in Clostridium difficile infection is the administration of antibiotics contributing to the high rates of recurrent infections. Recent alternative strategies, such as fecal microbiome transplantation and anti-toxin antibodies, have shown similar efficacy in the treatment of C. difficile associated disease (CDAD). However, barriers exist for either treatment or other novel treatments to displace antibiotics as the standard of care. To aid in the comparison of these and future treatments in CDAD, we developed an in silico pipeline to predict clinical efficacy with nonclinical results. The pipeline combines an ordinary differential equation (ODE)-based model, describing the immunological and microbial interactions in the gastrointestinal (GI) mucosa, with machine learning algorithms to translate simulated output quantities (i.e. time of clearance, quantity of commensal bacteria, T cell ratios) into clinical predictions based on prior preclinical, translational and clinical trial data. As a use case, we compare the efficacy of lanthionine synthetase C-like 2 (LANCL2), a novel immunoregulatory target with promising efficacy in inflammatory bowel disease (IBD), activation with antibiotics, fecal microbiome transplantation and anti-toxin antibodies in the treatment of CDAD. We further validate the potential of LANCL2 pathway activation, in a mouse model of C. difficile infection in which it displays an ability to decrease weight loss and inflammatory cell types while protecting against mortality. The computational pipeline can serve as an important resource in the development of new treatment modalities., (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Published
- 2017
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37. Cooperation of Gastric Mononuclear Phagocytes with Helicobacter pylori during Colonization.
- Author
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Viladomiu M, Bassaganya-Riera J, Tubau-Juni N, Kronsteiner B, Leber A, Philipson CW, Zoccoli-Rodriguez V, and Hontecillas R
- Subjects
- Animals, Disease Models, Animal, Flow Cytometry, Helicobacter pylori, Mice, Mice, Inbred C57BL, Gastric Mucosa immunology, Gastric Mucosa microbiology, Helicobacter Infections immunology, Macrophages immunology
- Abstract
Helicobacter pylori , the dominant member of the human gastric microbiota, elicits immunoregulatory responses implicated in protective versus pathological outcomes. To evaluate the role of macrophages during infection, we employed a system with a shifted proinflammatory macrophage phenotype by deleting PPARγ in myeloid cells and found a 5- to 10-fold decrease in gastric bacterial loads. Higher levels of colonization in wild-type mice were associated with increased presence of mononuclear phagocytes and in particular with the accumulation of CD11b
+ F4/80hi CD64+ CX3 CR1+ macrophages in the gastric lamina propria. Depletion of phagocytic cells by clodronate liposomes in wild-type mice resulted in a reduction of gastric H. pylori colonization compared with nontreated mice. PPARγ-deficient and macrophage-depleted mice presented decreased IL-10-mediated myeloid and T cell regulatory responses soon after infection. IL-10 neutralization during H. pylori infection led to increased IL-17-mediated responses and increased neutrophil accumulation at the gastric mucosa. In conclusion, we report the induction of IL-10-driven regulatory responses mediated by CD11b+ F4/80hi CD64+ CX3 CR1+ mononuclear phagocytes that contribute to maintaining high levels of H. pylori loads in the stomach by modulating effector T cell responses at the gastric mucosa., (Copyright © 2017 by The American Association of Immunologists, Inc.)- Published
- 2017
- Full Text
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38. NLRX1 Regulates Effector and Metabolic Functions of CD4 + T Cells.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, Zoccoli-Rodriguez V, Hulver M, McMillan R, Eden K, Allen IC, and Bassaganya-Riera J
- Subjects
- Adoptive Transfer, Animals, Cell Proliferation genetics, Cells, Cultured, Colitis chemically induced, Dextran Sulfate, Disease Models, Animal, Humans, Interferon-gamma metabolism, Interleukin-17 metabolism, Mice, Mice, Inbred C57BL, Mice, Knockout, Mitochondrial Proteins genetics, Tumor Necrosis Factor-alpha metabolism, Citrobacter rodentium immunology, Colitis immunology, Enterobacteriaceae Infections immunology, Inflammatory Bowel Diseases immunology, Mitochondrial Proteins metabolism, T-Lymphocytes, Regulatory immunology, Th1 Cells immunology, Th2 Cells immunology
- Abstract
Nucleotide oligomerization domain-like receptor X1 (NLRX1) has been implicated in viral response, cancer progression, and inflammatory disorders; however, its role as a dual modulator of CD4
+ T cell function and metabolism has not been defined. The loss of NLRX1 results in increased disease severity, populations of Th1 and Th17 cells, and inflammatory markers (IFN-γ, TNF-α, and IL-17) in mice with dextran sodium sulfate-induced colitis. To further characterize this phenotype, we used in vitro CD4+ T cell-differentiation assays and show that NLRX1-deficient T cells have a greater ability to differentiate into an inflammatory phenotype and possess greater proliferation rates. Further, NLRX1-/- cells have a decreased responsiveness to immune checkpoint pathways and greater rates of lactate dehydrogenase activity. When metabolic effects of the knockout are impaired, NLRX1-deficient cells do not display significant differences in differentiation or proliferation. To confirm the role of NLRX1 specifically in T cells, we used an adoptive-transfer model of colitis. Rag2-/- mice receiving NLRX1-/- naive or effector T cells experienced increased disease activity and effector T cell populations, whereas no differences were observed between groups receiving wild-type or NLRX1-/- regulatory T cells. Metabolic effects of NLRX1 deficiency are observed in a CD4-specific knockout of NLRX1 within a Citrobacter rodentium model of colitis. The aerobic glycolytic preference in NLRX1-/- effector T cells is combined with a decreased sensitivity to immunosuppressive checkpoint pathways to provide greater proliferative capabilities and an inflammatory phenotype bias leading to increased disease severity., (Copyright © 2017 by The American Association of Immunologists, Inc.)- Published
- 2017
- Full Text
- View/download PDF
39. Lanthionine Synthetase C-Like 2 Modulates Immune Responses to Influenza Virus Infection.
- Author
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Leber A, Bassaganya-Riera J, Tubau-Juni N, Zoccoli-Rodriguez V, Lu P, Godfrey V, Kale S, and Hontecillas R
- Abstract
Broad-based, host-targeted therapeutics have the potential to ameliorate viral infections without inducing antiviral resistance. We identified lanthionine synthetase C-like 2 (LANCL2) as a new therapeutic target for immunoinflammatory diseases. To examine the therapeutic efficacy of oral NSC61610 administration on influenza, we infected C57BL/6 mice with influenza A H1N1pdm virus and evaluated influenza-related mortality, lung inflammatory profiles, and pulmonary histopathology. Oral treatment with NSC61610 ameliorates influenza virus infection by down-modulating pulmonary inflammation through the downregulation of TNF-α and MCP-1 and reduction in the infiltration of neutrophils. NSC61610 treatment increases IL10-producing CD8+ T cells and macrophages in the lungs during the resolution phase of disease. The loss of LANCL2 or neutralization of IL-10 in mice infected with influenza virus abrogates the ability of NSC61610 to accelerate recovery and induce IL-10-mediated regulatory responses. These studies validate that oral treatment with NSC61610 ameliorates morbidity and mortality and accelerates recovery during influenza virus infection through a mechanism mediated by activation of LANCL2 and subsequent induction of IL-10 responses by CD8+ T cells and macrophages in the lungs.
- Published
- 2017
- Full Text
- View/download PDF
40. Modeling the Role of Lanthionine Synthetase C-Like 2 (LANCL2) in the Modulation of Immune Responses to Helicobacter pylori Infection.
- Author
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Leber A, Bassaganya-Riera J, Tubau-Juni N, Zoccoli-Rodriguez V, Viladomiu M, Abedi V, Lu P, and Hontecillas R
- Subjects
- Animals, Computer Simulation, Interleukin-10 immunology, Macrophages microbiology, Membrane Proteins, Mice, Mice, Inbred C57BL, Mice, Knockout, Models, Immunological, Phosphate-Binding Proteins, Receptors, Cell Surface genetics, T-Lymphocytes, Regulatory immunology, T-Lymphocytes, Regulatory microbiology, Helicobacter Infections immunology, Helicobacter pylori immunology, Macrophages immunology, Receptors, Cell Surface immunology
- Abstract
Immune responses to Helicobacter pylori are orchestrated through complex balances of host-bacterial interactions, including inflammatory and regulatory immune responses across scales that can lead to the development of the gastric disease or the promotion of beneficial systemic effects. While inflammation in response to the bacterium has been reasonably characterized, the regulatory pathways that contribute to preventing inflammatory events during H. pylori infection are incompletely understood. To aid in this effort, we have generated a computational model incorporating recent developments in the understanding of H. pylori-host interactions. Sensitivity analysis of this model reveals that a regulatory macrophage population is critical in maintaining high H. pylori colonization without the generation of an inflammatory response. To address how this myeloid cell subset arises, we developed a second model describing an intracellular signaling network for the differentiation of macrophages. Modeling studies predicted that LANCL2 is a central regulator of inflammatory and effector pathways and its activation promotes regulatory responses characterized by IL-10 production while suppressing effector responses. The predicted impairment of regulatory macrophage differentiation by the loss of LANCL2 was simulated based on multiscale linkages between the tissue-level gastric mucosa and the intracellular models. The simulated deletion of LANCL2 resulted in a greater clearance of H. pylori, but also greater IFNγ responses and damage to the epithelium. The model predictions were validated within a mouse model of H. pylori colonization in wild-type (WT), LANCL2 whole body KO and myeloid-specific LANCL2-/- (LANCL2Myeloid) mice, which displayed similar decreases in H. pylori burden, CX3CR1+ IL-10-producing macrophages, and type 1 regulatory (Tr1) T cells. This study shows the importance of LANCL2 in the induction of regulatory responses in macrophages and T cells during H. pylori infection., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2016
- Full Text
- View/download PDF
41. Translating nutritional immunology into drug development for inflammatory bowel disease.
- Author
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Leber A, Hontecillas R, Tubau-Juni N, and Bassaganya-Riera J
- Subjects
- Gastrointestinal Agents therapeutic use, Gastrointestinal Microbiome, Humans, Inflammatory Bowel Diseases microbiology, Molecular Targeted Therapy methods, Translational Research, Biomedical methods, Drug Discovery methods, Inflammatory Bowel Diseases drug therapy, Inflammatory Bowel Diseases immunology, Nutritional Physiological Phenomena immunology
- Abstract
Purpose of Review: To highlight recent advances in the understanding of nutritional immunology and in the development of novel therapeutics for inflammatory bowel disease (IBD)., Recent Findings: We highlight the variety of factors that contribute to the interaction of the immune system and nutrition including the microbiome and the nervous system stimulation of the gut. We describe the potential for therapeutic development in IBD. Further, we review the cellular metabolic effects on immune activation and promising therapeutic targets. Finally, we show how the progression of understanding the role of lanthionine synthetase C-like 2 has encompassed both nutritional and therapeutic advances and led to the development of novel oral small molecule therapeutics for IBD., Summary: Nutritional immunology and drug development research centered around immunoregulatory pathways can provide safer and more effective drugs while accelerating the path to cures.
- Published
- 2016
- Full Text
- View/download PDF
42. Modeling-Enabled Systems Nutritional Immunology.
- Author
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Verma M, Hontecillas R, Abedi V, Leber A, Tubau-Juni N, Philipson C, Carbo A, and Bassaganya-Riera J
- Abstract
This review highlights the fundamental role of nutrition in the maintenance of health, the immune response, and disease prevention. Emerging global mechanistic insights in the field of nutritional immunology cannot be gained through reductionist methods alone or by analyzing a single nutrient at a time. We propose to investigate nutritional immunology as a massively interacting system of interconnected multistage and multiscale networks that encompass hidden mechanisms by which nutrition, microbiome, metabolism, genetic predisposition, and the immune system interact to delineate health and disease. The review sets an unconventional path to apply complex science methodologies to nutritional immunology research, discovery, and development through "use cases" centered around the impact of nutrition on the gut microbiome and immune responses. Our systems nutritional immunology analyses, which include modeling and informatics methodologies in combination with pre-clinical and clinical studies, have the potential to discover emerging systems-wide properties at the interface of the immune system, nutrition, microbiome, and metabolism.
- Published
- 2016
- Full Text
- View/download PDF
43. Modeling-Enabled Characterization of Novel NLRX1 Ligands.
- Author
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Lu P, Hontecillas R, Abedi V, Kale S, Leber A, Heltzel C, Langowski M, Godfrey V, Philipson C, Tubau-Juni N, Carbo A, Girardin S, Uren A, and Bassaganya-Riera J
- Subjects
- Animals, Anti-Inflammatory Agents pharmacology, Anti-Inflammatory Agents therapeutic use, Colitis drug therapy, Drug Evaluation, Preclinical, Fatty Acids metabolism, Gene Expression Regulation drug effects, Humans, Ligands, Linolenic Acids metabolism, Linolenic Acids pharmacology, Linolenic Acids therapeutic use, Mice, Mitochondrial Proteins genetics, Mutation, NF-kappa B metabolism, Peptide Fragments chemistry, Peptide Fragments metabolism, Protein Structure, Tertiary, Anti-Inflammatory Agents metabolism, Mitochondrial Proteins chemistry, Mitochondrial Proteins metabolism, Molecular Docking Simulation
- Abstract
Nucleotide-binding domain and leucine-rich repeat containing (NLR) family are intracellular sentinels of cytosolic homeostasis that orchestrate immune and inflammatory responses in infectious and immune-mediated diseases. NLRX1 is a mitochondrial-associated NOD-like receptor involved in the modulation of immune and metabolic responses. This study utilizes molecular docking approaches to investigate the structure of NLRX1 and experimentally assesses binding to naturally occurring compounds from several natural product and lipid databases. Screening of compound libraries predicts targeting of NLRX1 by conjugated trienes, polyketides, prenol lipids, sterol lipids, and coenzyme A-containing fatty acids for activating the NLRX1 pathway. The ligands of NLRX1 were identified by docking punicic acid (PUA), eleostearic acid (ESA), and docosahexaenoic acid (DHA) to the C-terminal fragment of the human NLRX1 (cNLRX1). Their binding and that of positive control RNA to cNLRX1 were experimentally determined by surface plasmon resonance (SPR) spectroscopy. In addition, the ligand binding sites of cNLRX1 were predicted in silico and validated experimentally. Target mutagenesis studies demonstrate that mutation of 4 critical residues ASP677, PHE680, PHE681, and GLU684 to alanine resulted in diminished affinity of PUA, ESA, and DHA to NLRX1. Consistent with the regulatory actions of NLRX1 on the NF-κB pathway, treatment of bone marrow derived macrophages (BMDM)s with PUA and DHA suppressed NF-κB activity in a NLRX1 dependent mechanism. In addition, a series of pre-clinical efficacy studies were performed using a mouse model of dextran sodium sulfate (DSS)-induced colitis. Our findings showed that the regulatory function of PUA on colitis is NLRX1 dependent. Thus, we identified novel small molecules that bind to NLRX1 and exert anti-inflammatory actions.
- Published
- 2015
- Full Text
- View/download PDF
44. Evaluation of aegerolysins as novel tools to detect and visualize ceramide phosphoethanolamine, a major sphingolipid in invertebrates.
- Author
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Bhat HB, Ishitsuka R, Inaba T, Murate M, Abe M, Makino A, Kohyama-Koganeya A, Nagao K, Kurahashi A, Kishimoto T, Tahara M, Yamano A, Nagamune K, Hirabayashi Y, Juni N, Umeda M, Fujimori F, Nishibori K, Yamaji-Hasegawa A, Greimel P, and Kobayashi T
- Subjects
- Animals, Drosophila melanogaster, Larva chemistry, Larva metabolism, Fungal Proteins chemistry, Hemolysin Proteins chemistry, Sphingomyelins chemistry, Sphingomyelins metabolism
- Abstract
Ceramide phosphoethanolamine (CPE), a sphingomyelin analog, is a major sphingolipid in invertebrates and parasites, whereas only trace amounts are present in mammalian cells. In this study, mushroom-derived proteins of the aegerolysin family—pleurotolysin A2 (PlyA2; K(D) = 12 nM), ostreolysin (Oly; K(D) = 1.3 nM), and erylysin A (EryA; K(D) = 1.3 nM)—strongly associated with CPE/cholesterol (Chol)-containing membranes, whereas their low affinity to sphingomyelin/Chol precluded establishment of the binding kinetics. Binding specificity was determined by multilamellar liposome binding assays, supported bilayer assays, and solid-phase studies against a series of neutral and negatively charged lipid classes mixed 1:1 with Chol or phosphatidylcholine. No cross-reactivity was detected with phosphatidylethanolamine. Only PlyA2 also associated with CPE, independent of Chol content (K(D) = 41 μM), rendering it a suitable tool for visualizing CPE in lipid-blotting experiments and biologic samples from sterol auxotrophic organisms. Visualization of CPE enrichment in the CNS of Drosophila larvae (by PlyA2) and in the bloodstream form of the parasite Trypanosoma brucei (by EryA) by fluorescence imaging demonstrated the versatility of aegerolysin family proteins as efficient tools for detecting and visualizing CPE., (© FASEB.)
- Published
- 2015
- Full Text
- View/download PDF
45. Genetic analysis of chaste, a new mutation of Drosophila melanogaster characterized by extremely low female sexual receptivity.
- Author
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Juni N and Yamamoto D
- Subjects
- Age Factors, Alleles, Animals, Animals, Genetically Modified, Chromosome Mapping, Copulation physiology, Drosophila Proteins metabolism, Drosophila melanogaster genetics, Exons genetics, Female, Genetic Testing, Male, Mutagenesis genetics, Nuclear Proteins genetics, Nuclear Proteins metabolism, Phenotype, RNA, Messenger metabolism, Sulfotransferases genetics, Sulfotransferases metabolism, Carbohydrate Sulfotransferases, Drosophila Proteins genetics, Drosophila melanogaster physiology, Gene Deletion, Sexual Behavior, Animal physiology
- Abstract
By screening about 2,000 P-element-insertion lines of Drosophila melanogaster, we isolated a new behavioral mutant line, chaste (chst), the females of which display extraordinarily strong rejection behavior against courting males. The chst mutation is mapped to the muscleblind (mbl) locus at 54B on the right arm of chromosome 2. The reduced sexual receptivity in chst mutant females is reversed to the wild-type level by introducing a transgene, which expresses either the mblB (+) or mblC (+) isoform, demonstrating that chst is an allele of mbl. Among the P-elements inserted upstream of the mbl gene, those inserted in the same orientation as that of mbl express the chst phenotype, whereas a P-element inserted in the opposite orientation does not. This finding implies that the former P-elements induce the mutant phenotype by a mechanism that is sensitive to the direction of transcription (e.g., transcriptional interference). The mbl alleles, with deletions near the transcription start site and/or in part of the exons, complement the chst mutation in the sexual receptivity phenotype, but not in the lethality phenotype of mbl mutations. Such interallelic complementation of the sexual receptivity phenotype in the mbl locus disappears in the presence of a mutant copy of zeste (z), a gene encoding a protein that mediates transvection. We suggest that the mbl gene function is required for the normal development of neural substrates that regulate female sexual receptivity.
- Published
- 2009
- Full Text
- View/download PDF
46. Inhibition of angiotensin converting enzyme (ACE) activity by flavan-3-ols and procyanidins.
- Author
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Actis-Goretta L, Ottaviani JI, Keen CL, and Fraga CG
- Subjects
- Animals, Binding Sites, Binding, Competitive, Catechin chemistry, Inhibitory Concentration 50, Kinetics, Lung enzymology, Rabbits, Substrate Specificity, Thermodynamics, Angiotensin-Converting Enzyme Inhibitors pharmacology, Biflavonoids, Catechin pharmacology, Flavonoids pharmacology, Peptidyl-Dipeptidase A metabolism, Proanthocyanidins
- Abstract
It was determined that flavan-3-ols and procyanidins have an inhibitory effect on angiotensin I converting enzyme (ACE) activity, and the effect was dependent on the number of epicatechin units forming the procyanidin. The inhibition by flavan-3-ols and procyanidins was competitive with the two substrates assayed: N-hippuryl-L-histidyl-L-leucine (HHL) and N-[3-(2-furyl)acryloyl]-L-phenylalanylglycylglycine (FAPGG). Tetramer and hexamer fractions were the more potent inhibitors, showing Ki of 5.6 and 4.7 microM, respectively. As ACE is a membrane protein, the interaction of flavanols and procyanidins with the enzyme could be related to the number of hydroxyl groups on the procyanidins, which determine their capacity to be adsorbed on the membrane surface.
- Published
- 2003
- Full Text
- View/download PDF
47. NPR-C receptors are involved in C-type natriuretic peptide response on bile secretion.
- Author
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Sabbatini ME, Vatta MS, Vescina C, Gonzales S, Fernandez B, and Bianciotti LG
- Subjects
- Animals, Atrial Natriuretic Factor metabolism, Atrial Natriuretic Factor pharmacology, Blood Pressure drug effects, Dose-Response Relationship, Drug, Natriuretic Peptide, C-Type metabolism, Rats, Rats, Sprague-Dawley, Bile metabolism, Guanylate Cyclase metabolism, Natriuretic Peptide, C-Type pharmacology, Receptors, Atrial Natriuretic Factor metabolism
- Abstract
C-type natriuretic peptide (CNP) is a member of the natriuretic peptide family. Previous studies reported the presence of natriuretic peptide receptors and mRNA CNP in the liver. In the present work, we sought to establish the role of CNP in the regulation of bile secretion in the rat and the possible pathways involved.CNP diminished basal as well as bile salt-evoked bile flow and bile acid output in a dose-dependent manner. It also reduced the excretion of sodium, chloride, and potassium but did not modify bile pH or the excretion of phospholipids, total proteins, and glutathione. Neither parasympathetic nor sympathetic blockade abolished CNP inhibitory response on bile secretion. The selective NPR-C agonist, C-ANP-(4-23) amide, diminished bile flow and the co-administration of both peptides did not further decrease it. CNP did not alter mean arterial pressure or portal venous pressure at any given doses.CNP decreased bile acid-dependent flow without affecting bile acid-independent flow. The inhibitory effect of CNP did not involve the participation of the autonomic nervous system or hemodynamic changes. The participation of NPR-C receptors in CNP response is strongly supported by present findings. The present study shows that CNP modulates bile secretion in the rat, suggesting that CNP may be part of the large family of peptides involved in the regulation of gastrointestinal physiology.
- Published
- 2003
- Full Text
- View/download PDF
48. The ken and barbie gene encoding a putative transcription factor with a BTB domain and three zinc finger motifs functions in terminalia development of Drosophila.
- Author
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Lukacsovich T, Yuge K, Awano W, Asztalos Z, Kondo S, Juni N, and Yamamoto D
- Subjects
- Acetyl-CoA C-Acetyltransferase biosynthesis, Acetyl-CoA C-Acetyltransferase genetics, Amino Acid Sequence, Animals, Base Sequence, DNA-Binding Proteins chemistry, Drosophila anatomy & histology, Drosophila embryology, Female, Gene Expression Regulation, Developmental genetics, Genes genetics, Male, Molecular Sequence Data, RNA, Messenger analysis, RNA, Messenger biosynthesis, Sequence Homology, Amino Acid, Sex Differentiation genetics, Transcription Factors chemistry, beta-Galactosidase biosynthesis, DNA-Binding Proteins genetics, Drosophila genetics, Drosophila growth & development, Genitalia growth & development, Transcription Factors genetics, Zinc Fingers genetics
- Abstract
Mutations in the ken and barbie locus are accompanied by the malformation of terminalia in adult Drosophila. Male and female genitalia often remain inside the body, and the same portions of genitalia and analia are missing in a fraction of homozygous flies. Rotated and/or duplicated terminalia are also observed. Terminalia phenotypes are enhanced by mutations in the gap gene tailless, the homeobox gene caudal, and the decapentaplegic gene that encodes a TGFbeta-like morphogen. The ken and barbie gene encodes a protein with three CCHH-type zinc finger motifs that are conserved in several transcription factors such as Krüppel and BCL-6. All defects in ken and barbie mutants are fully rescued by the expression of a wild-type genomic construct, which establishes the causality between phenotypes and the gene., (Copyright 2003 Wiley-Liss, Inc.)
- Published
- 2003
- Full Text
- View/download PDF
49. Enhanced phosphorylation and enzymatic activity of phosphoglucomutase by the Btk29A tyrosine kinase in Drosophila.
- Author
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Inoue H, Kondo S, Hinohara Y, Juni N, and Yamamoto D
- Subjects
- Animals, Calcium metabolism, Catalysis, Drosophila metabolism, Hydrogen-Ion Concentration, Immunoblotting, Microscopy, Electron, Scanning, Phenotype, Phosphoglucomutase metabolism, Phosphorylation, Drosophila enzymology, Photoreceptor Cells, Invertebrate enzymology, Protein-Tyrosine Kinases chemistry, Protein-Tyrosine Kinases metabolism
- Abstract
The Drosophila Btk29A tyrosine kinase is suggested to be involved in diverse processes, although its target proteins are unknown. In the present study, we investigated substrates of Btk29A tyrosine kinase by expressing a catalytically activated form of Btk29A-P1 (Btk-EG) in Drosophila compound eyes. Expression in eye disks led to the development of the rough-eye phenotype and increased tyrosine phosphorylation of a 65-kDa protein. Partial amino acid sequence analysis of this protein showed that it was phosphoglucomutase. Phosphoglucomutase activity in heads from Btk-EG-expressing flies was higher than that in controls, suggesting that the levels of tyrosine phosphorylation and activity of the enzyme are associated with Btk29A tyrosine kinase activity.
- Published
- 2003
- Full Text
- View/download PDF
50. Expression analysis of the lingerer gene in the larval central nervous system of Drosophila melanogaster.
- Author
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Kuniyoshi H, Usui-Aoki K, Juni N, and Yamamoto D
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Central Nervous System ultrastructure, Female, Gene Expression, Green Fluorescent Proteins, Larva, Luminescent Proteins genetics, Male, Microscopy, Confocal, Molecular Sequence Data, Motor Neurons metabolism, Motor Neurons ultrastructure, Promoter Regions, Genetic, Sequence Analysis, DNA, Central Nervous System metabolism, Drosophila Proteins genetics, Drosophila melanogaster physiology, Genes, Insect, Sexual Behavior, Animal physiology
- Abstract
The lingerer (lig) gene is necessary for initiation and termination of copulatory behavior in Drosophila melanogaster. The lig gene encodes cytoplasmic proteins, and is expressed in the central nervous system (CNS) during the late third-instar larval stage when the lig function is required for normal copulation to occur after adult eclosion. To characterize the lig-expressing cells in the late third-instar larval CNS, we have isolated a genomic fragment containing the promoter/enhancer region of the lig gene, and established transgenic lines in which expression of reporter genes is controlled by the lig promoter/enhancer. In the larval brain, reporter genes were expressed in all of the glial cells and in clusters of neurons that projected contralaterally. In the larval ventral ganglion, reporter genes were expressed in subperineurial glia, peripheral exit glia, and a number of interneurons, but not in motor neurons. In the cloned promoter/enhancer region, we have found the sequence motif for binding of the REPO protein, a transcription factor essential for the differentiation and maintenance of glial cells. The lig gene is thus one of the candidate target genes for the REPO transcription factor.
- Published
- 2003
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