12 results on '"Julian Catmull"'
Search Results
2. Apparent Involvement of a β1 Type Integrin in Coral Fertilization
- Author
-
David J. Miller, Akira Iguchi, Julian Catmull, Luis Miguel Marquez, Madeleine J. H. van Oppen, Brent Knack, Kate Hardie, Bette L. Willis, and Chuya Shinzato
- Subjects
Integrin ,Gene Expression ,Biology ,Polymerase Chain Reaction ,Applied Microbiology and Biotechnology ,Antibodies ,Acropora millepora ,Anthozoa ,medicine ,Animals ,Acropora ,Cell adhesion ,DNA Primers ,Ovum ,Integrin alpha Chains ,Ecology ,Gene Expression Profiling ,Integrin beta1 ,biology.organism_classification ,Sperm ,Cell biology ,medicine.anatomical_structure ,Fertilization ,biology.protein ,Gamete ,Rabbits - Abstract
Integrins are involved in a wide variety of cell adhesion processes, and have roles in gamete binding and fusion in mammals. Integrins have been also discovered in the scleractinian coral Acropora millepora (Cnidaria: Anthozoa). As a first step toward understanding the molecular basis of fertilization in corals, we examined the effect of polyclonal antisera raised against recombinant coral integrins on gamete interactions in A. millepora. Antiserum raised against integrin betacn1 dramatically decreased the binding of Acropora sperm to eggs and significantly decreased fertilization rates relative to preimmune serum and seawater controls. However, the antiserum against AmIntegrin alpha1 did not affect significantly either sperm-egg binding or fertilization. One possible explanation for this is that AmIntegrin alpha1 may preferentially mediate interactions with RGD-containing ligands, whereas mammalian alpha6 integrin (which is most directly implicated in gamete interactions) preferentially interacts with laminin-related ligands. Our results suggest that beta1 type integrins are involved in the fertilization process in Acropora and that some functions of these molecules may have been conserved between corals and mammals.
- Published
- 2007
- Full Text
- View/download PDF
3. Reconstitution of the Peridinin–chlorophyll a Protein (PCP): Evidence for Functional Flexibility in Chlorophyll Binding
- Author
-
Roger G. Hiller, Julian Catmull, Frank P. Sharples, Robert Puskeiler, David J. Miller, and Helen Tweedale
- Subjects
Chlorophyll ,Circular dichroism ,Ion chromatography ,Protein reconstitution ,Protozoan Proteins ,macromolecular substances ,Plant Science ,Biochemistry ,Absorbance ,Pigment ,chemistry.chemical_compound ,polycyclic compounds ,Chlorophyll binding ,Chemistry ,Chlorophyll A ,Spectrum Analysis ,food and beverages ,Cell Biology ,General Medicine ,Fluorescence ,Carotenoids ,Protein Structure, Tertiary ,Peridinin ,visual_art ,visual_art.visual_art_medium ,Protein Binding - Abstract
The coding regions for the N-domain, and full length peridinin-chlorophyll a apoprotein (full length PCP), were expressed in Escherichia coli. The apoproteins formed inclusion bodies from which the peptides could be released by hot buffer. Both the above constructs were reconstituted by addition of a total pigment extract from native PCP. After purification by ion exchange chromatography, the absorbance, fluorescence excitation and CD spectra resembled those of the native PCP. Energy transfer from peridinin to Chl a was restored and a specific fluorescence activity calculated which was approximately 86% of that of native PCP. Size exclusion analysis and CD spectra showed that the N-domain PCP dimerized on reconstitution. Chl a could be replaced by Chl b, 3-acetyl Chl a, Chl d and Bchl using the N-domain apo protein. The specific fluorescence activity was the same for constructs with Chl a, 3-acetyl Chl a, and Chl d but significantly reduced for those made with Chl b. Reconstitutions with mixtures of chlorophylls were also made with eg Chl b and Chl d and energy transfer from the higher energy Qy band to the lower was demonstrated.
- Published
- 2005
- Full Text
- View/download PDF
4. The Mitochondrial Genome of Acropora tenuis (Cnidaria; Scleractinia) Contains a Large Group I Intron and a Candidate Control Region
- Author
-
David J. Miller, Paul J. Hagerman, Madeleine J. H. van Oppen, Brenda J. McDonald, Nikki R. Hislop, and Julian Catmull
- Subjects
Mitochondrial DNA ,Molecular Sequence Data ,Restriction Mapping ,ved/biology.organism_classification_rank.species ,Codon, Initiator ,Biology ,DNA, Mitochondrial ,Conserved sequence ,Evolution, Molecular ,Intergenic region ,Sequence Homology, Nucleic Acid ,Genetics ,Animals ,Cloning, Molecular ,Molecular Biology ,Gene ,Acropora tenuis ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,DNA Primers ,mtDNA control region ,Base Sequence ,ved/biology ,Nucleic acid sequence ,Intron ,Anthozoa ,Introns ,Codon, Terminator ,Nucleic Acid Conformation ,Sequence Alignment - Abstract
The complete nucleotide sequence of the mitochondrial genome of the coral Acropora tenuis has been determined. The 18,338 bp A. tenuis mitochondrial genome contains the standard metazoan complement of 13 protein-coding and two rRNA genes, but only the same two tRNA genes (trnM and trnW) as are present in the mtDNA of the sea anemone, Metridium senile. The A. tenuis nad5 gene is interrupted by a large group I intron which contains ten protein-coding genes and rns; M. senile has an intron at the same position but this contains only two protein-coding genes. Despite the large distance (about 11.5 kb) between the 5?-exon and 3?-exon boundaries, the A. tenuis nad5 gene is functional, as we were able to RT-PCR across the predicted intron splice site using total RNA from A. tenuis. As in M. senile, all of the genes in the A. tenuis mt genome have the same orientation, but their organization is completely different in these two zoantharians: The only common gene boundaries are those at each end of the group I intron and between trnM and rnl. Finally, we provide evidence that the rns-cox3 intergenic region in A. tenuis may correspond to the mitochondrial control region of higher animals. This region contains repetitive elements, and has the potential to form secondary structures of the type characteristic of vertebrate D-loops. Comparisons between a wide range of Acropora species showed that a long hairpin predicted in rns-cox3 is phylogenetically conserved, and allowed the tentative identification of conserved sequence blocks.
- Published
- 2002
- Full Text
- View/download PDF
5. Pax gene diversity in the basal cnidarian Acropora millepora (Cnidaria, Anthozoa): Implications for the evolution of the Pax gene family
- Author
-
Julian Catmull, Ingo Scholten, Eldon E. Ball, John S. Reece-Hoyes, Jill E. Larsen, David C. Hayward, Walter J. Gehring, Patrick Callaerts, and David J. Miller
- Subjects
Male ,animal structures ,Embryo, Nonmammalian ,RNA Splicing ,Molecular Sequence Data ,Evolution, Molecular ,Cnidaria ,Acropora millepora ,Phylogenetics ,biology.animal ,Anthozoa ,Consensus Sequence ,Animals ,Acropora ,Amino Acid Sequence ,RNA, Messenger ,Gene ,reproductive and urinary physiology ,Phylogeny ,Ovum ,Multidisciplinary ,Sequence Homology, Amino Acid ,biology ,Pax genes ,Intron ,Genetic Variation ,Vertebrate ,Anatomy ,Biological Sciences ,biology.organism_classification ,Spermatozoa ,body regions ,Evolutionary biology ,Multigene Family ,embryonic structures ,Drosophila ,Female ,sense organs ,Sequence Alignment ,Transcription Factors - Abstract
Pax genes encode a family of transcription factors, many of which play key roles in animal embryonic development but whose evolutionary relationships and ancestral functions are unclear. To address these issues, we are characterizing the Pax gene complement of the coral Acropora millepora , an anthozoan cnidarian. As the simplest animals at the tissue level of organization, cnidarians occupy a key position in animal evolution, and the Anthozoa are the basal class within this diverse phylum. We have identified four Pax genes in Acropora : two ( Pax-Aam and Pax-Bam ) are orthologs of genes identified in other cnidarians; the others ( Pax-Cam and Pax-Dam ) are unique to Acropora. Pax-Aam may be orthologous with Drosophila Pox neuro , and Pax-Bam clearly belongs to the Pax-2 / 5 / 8 class. The Pax-Bam Paired domain binds specifically and preferentially to Pax-2/5/8 binding sites. The recently identified Acropora gene Pax-Dam belongs to the Pax-3 / 7 class. Clearly, substantial diversification of the Pax family occurred before the Cnidaria/higher Metazoa split. The fourth Acropora Pax gene, Pax-Cam , may correspond to the ancestral vertebrate Pax gene and most closely resembles Pax-6 . The expression pattern of Pax-Cam , in putative neurons, is consistent with an ancestral role of the Pax family in neural differentiation and patterning. We have determined the genomic structure of each Acropora Pax gene and show that some splice sites are shared both between the coral genes and between these and Pax genes in triploblastic metazoans. Together, these data support the monophyly of the Pax family and indicate ancient origins of several introns.
- Published
- 2000
- Full Text
- View/download PDF
6. Pax-6 origins - implications from the structure of two coral Pax genes
- Author
-
Patrick Callaerts, John S. Reece-Hoyes, Eldon E. Ball, Rebecca Mastro, David J. Miller, Julian Catmull, Naomi E. McIntyre, and David C. Hayward
- Subjects
congenital, hereditary, and neonatal diseases and abnormalities ,DNA, Complementary ,animal structures ,PAX6 Transcription Factor ,Molecular Sequence Data ,Locus (genetics) ,Cnidaria ,Acropora millepora ,Genetics ,Animals ,Paired Box Transcription Factors ,Amino Acid Sequence ,Eye Proteins ,Gene ,Caenorhabditis elegans ,Genomic organization ,Homeodomain Proteins ,Sequence Homology, Amino Acid ,biology ,Pax genes ,Intron ,biology.organism_classification ,DNA-Binding Proteins ,Repressor Proteins ,body regions ,embryonic structures ,Homeobox ,sense organs ,Developmental Biology - Abstract
Vertebrate Pax-6 and its Drosophila homolog eyeless play central roles in eye specification, although it is not clear if this represents the ancestral role of this gene class. As the most "primitive" animals with true nervous systems, the Cnidaria may be informative in terms of the evolution of the Pax gene family. For this reason we surveyed the Pax gene complement of a representative of the basal cnidarian class (the Anthozoa), the coral Acropora millepora. cDNAs encoding two coral Pax proteins were isolated. Pax-Aam encoded a protein containing only a paired domain, whereas Pax-Cam also contained a homeodomain clearly related to those in the Pax-6 family. The paired domains in both proteins most resembled the vertebrate Pax-2/5/8 class, but shared several distinctive substitutions. As in most Pax-6 homologs and orthologs, an intron was present in the Pax-Cam locus at a position corresponding to residues 46/47 in the homeodomain. We propose a model for evolution of the Pax family, in which the ancestor of all of the vertebrate Pax genes most resembled Pax-6, and arose via fusion of a Pax-Aam-like gene (encoding only a paired domain) with an anteriorly-expressed homeobox gene resembling the paired-like class.
- Published
- 1998
- Full Text
- View/download PDF
7. Localized expression of a dpp/BMP2/4 ortholog in a coral embryo
- Author
-
Patricia C. Pontynen, David J. Miller, Eldon E. Ball, David C. Hayward, Julian Catmull, Robert Saint, and Gabrielle Samuel
- Subjects
Subfamily ,animal structures ,Embryo, Nonmammalian ,Molecular Sequence Data ,Bone Morphogenetic Protein 2 ,Ectoderm ,Bone Morphogenetic Protein 4 ,Biology ,Cnidaria ,Acropora millepora ,Transforming Growth Factor beta ,medicine ,Animals ,Drosophila Proteins ,Amino Acid Sequence ,Bilateria ,Phylogeny ,Genetics ,Multidisciplinary ,Decapentaplegic ,Sequence Homology, Amino Acid ,fungi ,Inversion (evolutionary biology) ,Gene Expression Regulation, Developmental ,Biological Sciences ,biology.organism_classification ,Cell biology ,medicine.anatomical_structure ,Bone morphogenetic protein 4 ,embryonic structures ,Bone Morphogenetic Proteins ,Sequence Alignment ,Drosophila Protein - Abstract
As the closest outgroup to the Bilateria, the Phylum Cnidaria is likely to be critical to understanding the origins and evolution of body axes. Proteins of the decapentaplegic (DPP)/bone morphogenetic protein (BMP) 2/4 subfamily are central to the specification of the dorsoventral (D/V) axis in bilateral animals, albeit with an axis inversion between arthropods and chordates. We show that a dpp / BMP2 / 4 ortholog ( bmp2 / 4-Am ) is present in the reef-building scleractinian coral, Acropora millepora (Class Anthozoa) and that it is capable of causing phenotypic effects in Drosophila that mimic those of the endogenous dpp gene. We also show that, during coral embryonic development, bmp2 / 4-Am expression is localized in an ectodermal region adjacent to the blastopore. Thus, a representative of the DPP/BMP2/4 subfamily of ligands was present in the common ancestor of diploblastic and triploblastic animals where it was probably expressed in a localized fashion during development. A localized source of DPP/BMP2/4 may have already been used in axis formation in this ancestor, or it may have provided a means by which an axis could evolve in triploblastic animals.
- Published
- 2002
8. Nucleotide sequence of a cDNA from Onchocerca gibsoni encoding a novel repetitive antigen
- Author
-
Zhang Dan, Julian Catmull, and David J. Miller
- Subjects
Molecular Sequence Data ,Biology ,Genome ,Antigen ,Complementary DNA ,parasitic diseases ,Animals ,Humans ,Parasite hosting ,Amino Acid Sequence ,Repeated sequence ,Microfilariae ,Base Sequence ,integumentary system ,cDNA library ,Uterus ,Nucleic acid sequence ,DNA ,Virology ,Molecular biology ,Infectious Diseases ,Parasitology ,Antigens, Helminth ,Cattle ,Female ,Onchocerca - Abstract
Catmull J. , Dan Z. and Miller D. J. 1992. Nucleotide sequence of a cDNA from Onchocerca gibsoni encoding a novel repetitive antigen. International Journal for Parasitology 22 : 685–687. mRNA from uterine microfilariae of the cattle parasite Onchocerca gibsoni was used for the construction of cDNA libraries. A cDNA clone encoding an antigen recognized by serum from human individuals infected with O.volvulus was found to contain five copies of an 87 bp unit. These 87 bp units were present in the genome in high copy number as long tandem arrays. These are the first cDNA sequence data obtained directly from larvae of any Onchocerca species.
- Published
- 1992
- Full Text
- View/download PDF
9. Induction of specific cell-mediated immunity in mice by oral immunization with Salmonella expressing Onchocerca volvulus glutathione S-transferase
- Author
-
Julian Catmull, Mary E. Wilson, Louis V. Kirchhoff, Ahmed Metwali, and John E. Donelson
- Subjects
Salmonella typhimurium ,medicine.medical_treatment ,T-Lymphocytes ,Freund's Adjuvant ,Immunoblotting ,Antibodies, Helminth ,Administration, Oral ,Epitopes, T-Lymphocyte ,Lymphocyte Activation ,Onchocerciasis ,Vaccines, Attenuated ,Microbiology ,Mice ,Immune system ,Antigen ,Immunity ,medicine ,Animals ,Glutathione Transferase ,Immunity, Cellular ,Mice, Inbred BALB C ,Vaccines, Synthetic ,General Veterinary ,General Immunology and Microbiology ,biology ,Immunogenicity ,Public Health, Environmental and Occupational Health ,biology.organism_classification ,Onchocerca volvulus ,Antibodies, Bacterial ,Infectious Diseases ,Freund's adjuvant ,Immunology ,Antibody Formation ,biology.protein ,Molecular Medicine ,Cytokines ,Female ,Lymph Nodes ,Antibody ,Adjuvant ,Spleen - Abstract
Cellular and humoral immune responses of mice to Onchocerca volvulus glutathione S-transferase (OvGST) presented via in vivo expression in attenuated Salmonella typhimurium were examined and compared with the same antigen administered by subcutaneous injection with Freund's adjuvant. After infection with recombinant S. typhimurium, maximal numbers of bacteria were recovered from the mesenteric lymph nodes and spleens during the second week postinfection. By weeks 3-4, bacteria were absent from these tissues. Splenocytes from mice infected with S. typhimurium expressing OvGST showed significant and specific proliferative responses to OvGST, whereas the non-recombinant S. typhimurium controls and those which received the antigen by subcutaneous injection with Freund's adjuvant did not. Mice infected with recombinant S. typhimurium had elevated IFN-gamma levels over non-recombinant S. typhimurium and placebo controls. but IL-4 and IL-5 levels were low and did not differ significantly between these groups. Antibody responses to OvGST antigen expressed by a recombinant Salmonella vaccine or delivered in a purified form with Freund's adjuvant were moderate to high. These data suggest that Salmonella can be used as a vaccine delivery vector that induces specific cellular and humoral immune responses to Onchocerca volvulus antigens. This is the first report to describe the successful application of a filarial antigen in a live-vector delivery system as well as the first recombinant based filarial vaccine to elicit a cellular immune response similar to that described for putative immune endemics.
- Published
- 1999
10. Dinoflagellate Light-Harvesting Proteins: Genes, Structure and Reconstitution
- Author
-
MJ Broughton, Pamela M. Wrench, Roger G. Hiller, David J. Miller, Frank P. Sharples, and Julian Catmull
- Subjects
chemistry.chemical_classification ,ved/biology ,ved/biology.organism_classification_rank.species ,Intron ,food and beverages ,Biology ,Amino acid ,Cell biology ,Chloroplast ,chemistry ,Transit Peptide ,Amphidinium carterae ,Heterologous expression ,Gene ,Peptide sequence - Abstract
Background information on both the intrinsic light-harvesting complex (LHC) and peridinin-chlorophyll a-protein (PCP) is given. Amino acid sequences and introns of both the mature proteins and the chloroplast transit peptides have been analysed and a different route to the chloroplast is postulated. Two distinct forms of PCP are sufficiently dissimilar that they may not be homologous and no ancestor for either can be deduced. Heterologous expression of apoPCP and its reconstitution to functional PCP is reported.
- Published
- 1999
- Full Text
- View/download PDF
11. Identification and characterisation of a novel repetitive antigen from Onchocerca spp
- Author
-
Florence Ruggiero, David B. Copeman, Dan Zhang, Julian Catmull, David J. Miller, Deleage, Gilbert, Institut de biologie et chimie des protéines [Lyon] (IBCP), Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Male ,DNA, Complementary ,030231 tropical medicine ,Molecular Sequence Data ,Antibodies, Helminth ,Cross Reactions ,Onchocerciasis ,Brugia malayi ,03 medical and health sciences ,0302 clinical medicine ,Elephantiasis, Filarial ,Antigen ,Complementary DNA ,parasitic diseases ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Parasite hosting ,Animals ,Humans ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Wuchereria bancrofti ,Onchocerca ,Amino Acid Sequence ,Molecular Biology ,Microfilariae ,030304 developmental biology ,Repetitive Sequences, Nucleic Acid ,0303 health sciences ,biology ,Sequence Homology, Amino Acid ,cDNA library ,Helminth Proteins ,biology.organism_classification ,Onchocerca volvulus ,Virology ,Immunohistochemistry ,Recombinant Proteins ,Filariasis ,Antigens, Helminth ,biology.protein ,Parasitology ,Female ,Antibody - Abstract
International audience; A novel repetitive antigen from the cattle parasite Onchocerca gibsoni was shown to be recognised by sera from humans infected with Onchocerca volvulus, Wuchereria bancroftii or Brugia malayi. The O. gibsoni protein was produced in a recombinant form, and antibodies raised to this protein used to screen cDNA libraries for O. volvulus. A series of clones were isolated which encoded repetitive regions very similar to those in O. gibsoni, but interspersed between these were longer repeating units which we have not so far found in O. gibsoni. The repetitive antigen was shown to be of high molecular weight and present only in the insoluble (membrane) fraction of O. gibsoni microfilariae. Immunofluorescence techniques demonstrated that the antigen was associated both with muscle and with specific membrane layers, including a peripheral layer which corresponds to either the outer hypodermis or an inner region of the cuticle in adult female O. gibsoni. In many respects, the proteins encoded by the O. gibsoni and O. volvulus cDNA clones resembled repetitive antigens from several distantly related eukaryotic parasites, and a possible common role in immune evasion is discussed.A novel repetitive antigen from the cattle parasite Onchocerca gibsoni was shown to be recognised by sera from humans infected with Onchocerca volvulus, Wuchereria bancroftii or Brugia malayi. The O. gibsoni protein was produced in a recombinant form, and antibodies raised to this protein used to screen cDNA libraries for O. volvulus. A series of clones were isolated which encoded repetitive regions very similar to those in O. gibsoni, but interspersed between these were longer repeating units which we have not so far found in O. gibsoni. The repetitive antigen was shown to be of high molecular weight and present only in the insoluble (membrane) fraction of O. gibsoni microfilariae. Immunofluorescence techniques demonstrated that the antigen was associated both with muscle and with specific membrane layers, including a peripheral layer which corresponds to either the outer hypodermis or an inner region of the cuticle in adult female O. gibsoni. In many respects, the proteins encoded by the O. gibsoni and O. volvulus cDNA clones resembled repetitive antigens from several distantly related eukaryotic parasites, and a possible common role in immune evasion is discussed.
- Published
- 1994
12. Reconstitution of the Peridinin–chlorophyll a Protein (PCP): Evidence for Functional Flexibility in Chlorophyll Binding.
- Author
-
David Miller, Julian Catmull, Robert Puskeiler, Helen Tweedale, Frank Sharples, and Roger Hiller
- Abstract
Abstract The coding regions for the N-domain, and full length peridinin–chlorophyll a apoprotein (full length PCP), were expressed in Escherichia coli. The apoproteins formed inclusion bodies from which the peptides could be released by hot buffer. Both the above constructs were reconstituted by addition of a total pigment extract from native PCP. After purification by ion exchange chromatography, the absorbance, fluorescence excitation and CD spectra resembled those of the native PCP. Energy transfer from peridinin to Chl a was restored and a specific fluorescence activity calculated which was ~86% of that of native PCP. Size exclusion analysis and CD spectra showed that the N-domain PCP dimerized on reconstitution. Chl a could be replaced by Chl b, 3-acetyl Chl a, Chl d and Bchl using the N-domain apo protein. The specific fluorescence activity was the same for constructs with Chl a, 3-acetyl Chl a, and Chl d but significantly reduced for those made with Chl b. Reconstitutions with mixtures of chlorophylls were also made with eg Chl b and Chl d and energy transfer from the higher energy Qy band to the lower was demonstrated. [ABSTRACT FROM AUTHOR]
- Published
- 2005
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.