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9. sPlotOpen:an environmentally balanced, open-access, global dataset of vegetation plots

Author

Sabatini, F. M. (Francesco Maria), Lenoir, J. (Jonathan), Hattab, T. (Tarek), Arnst, E. A. (Elise Aimee), Chytry, M. (Milan), Dengler, J. (Juergen), De Ruffray, P. (Patrice), Hennekens, S. M. (Stephan M.), Jandt, U. (Ute), Jansen, F. (Florian), Jimenez-Alfaro, B. (Borja), Kattge, J. (Jens), Levesley, A. (Aurora), Pillar, V. D. (Valerio D.), Purschke, O. (Oliver), Sandel, B. (Brody), Sultana, F. (Fahmida), Aavik, T. (Tsipe), Acic, S. (Svetlana), Acosta, A. T. (Alicia T. R.), Agrillo, E. (Emiliano), Alvarez, M. (Miguel), Apostolova, I. (Iva), Arfin Khan, M. A. (Mohammed A. S.), Arroyo, L. (Luzmila), Attorre, F. (Fabio), Aubin, I. (Isabelle), Banerjee, A. (Arindam), Bauters, M. (Marijn), Bergeron, Y. (Yves), Bergmeier, E. (Erwin), Biurrun, I. (Idoia), Bjorkman, A. D. (Anne D.), Bonari, G. (Gianmaria), Bondareva, V. (Viktoria), Brunet, J. (Jorg), Carni, A. (Andraz), Casella, L. (Laura), Cayuela, L. (Luis), Cerny, T. (Tomas), Chepinoga, V. (Victor), Csiky, J. (Janos), Custerevska, R. (Renata), De Bie, E. (Els), de Gasper, A. L. (Andre Luis), De Sanctis, M. (Michele), Dimopoulos, P. (Panayotis), Dolezal, J. (Jiri), Dziuba, T. (Tetiana), El-Sheikh, M. A. (Mohamed Abd El-Rouf Mousa), Enquist, B. (Brian), Ewald, J. (Joerg), Fazayeli, F. (Farideh), Field, R. (Richard), Finckh, M. (Manfred), Gachet, S. (Sophie), Galan-de-Mera, A. (Antonio), Garbolino, E. (Emmanuel), Gholizadeh, H. (Hamid), Giorgis, M. (Melisa), Golub, V. (Valentin), Alsos, I. G. (Inger Greve), Grytnes, J.-A. (John-Arvid), Guerin, G. R. (Gregory Richard), Gutierrez, A. G. (Alvaro G.), Haider, S. (Sylvia), Hatim, M. Z. (Mohamed Z.), Herault, B. (Bruno), Hinojos Mendoza, G. (Guillermo), Hoelzel, N. (Norbert), Homeier, J. (Juergen), Hubau, W. (Wannes), Indreica, A. (Adrian), Janssen, J. A. (John A. M.), Jedrzejek, B. (Birgit), Jentsch, A. (Anke), Juergens, N. (Norbert), Kacki, Z. (Zygmunt), Kapfer, J. (Jutta), Karger, D. N. (Dirk Nikolaus), Kavgaci, A. (Ali), Kearsley, E. (Elizabeth), Kessler, M. (Michael), Khanina, L. (Larisa), Killeen, T. (Timothy), Korolyuk, A. (Andrey), Kreft, H. (Holger), Kuehl, H. S. (Hjalmar S.), Kuzemko, A. (Anna), Landucci, F. (Flavia), Lengyel, A. (Attila), Lens, F. (Frederic), Lingner, D. V. (Debora Vanessa), Liu, H. (Hongyan), Lysenko, T. (Tatiana), Mahecha, M. D. (Miguel D.), Marceno, C. (Corrado), Martynenko, V. (Vasiliy), Moeslund, J. E. (Jesper Erenskjold), Monteagudo Mendoza, A. (Abel), Mucina, L. (Ladislav), Muller, J. V. (Jonas V.), Munzinger, J. (Jerome), Naqinezhad, A. (Alireza), Noroozi, J. (Jalil), Nowak, A. (Arkadiusz), Onyshchenko, V. (Viktor), Overbeck, G. E. (Gerhard E.), Partel, M. (Meelis), Pauchard, A. (Anibal), Peet, R. K. (Robert K.), Penuelas, J. (Josep), Perez-Haase, A. (Aaron), Peterka, T. (Tomas), Petrik, P. (Petr), Peyre, G. (Gwendolyn), Phillips, O. L. (Oliver L.), Prokhorov, V. (Vadim), Rasomavicius, V. (Valerijus), Revermann, R. (Rasmus), Rivas-Torres, G. (Gonzalo), Rodwell, J. S. (John S.), Ruprecht, E. (Eszter), Rusina, S. (Solvita), Samimi, C. (Cyrus), Schmidt, M. (Marco), Schrodt, F. (Franziska), Shan, H. (Hanhuai), Shirokikh, P. (Pavel), Sibik, J. (Jozef), Silc, U. (Urban), Sklenar, P. (Petr), Skvorc, Z. (Zeljko), Sparrow, B. (Ben), Sperandii, M. G. (Marta Gaia), Stancic, Z. (Zvjezdana), Svenning, J.-C. (Jens-Christian), Tang, Z. (Zhiyao), Tang, C. Q. (Cindy Q.), Tsiripidis, I. (Ioannis), Vanselow, K. A. (Kim Andre), Vasquez Martinez, R. (Rodolfo), Vassilev, K. (Kiril), Velez-Martin, E. (Eduardo), Venanzoni, R. (Roberto), Vibrans, A. C. (Alexander Christian), Violle, C. (Cyrille), Virtanen, R. (Risto), von Wehrden, H. (Henrik), Wagner, V. (Viktoria), Walker, D. A. (Donald A.), Waller, D. M. (Donald M.), Wang, H.-F. (Hua-Feng), Wesche, K. (Karsten), Whitfeld, T. J. (Timothy J. S.), Willner, W. (Wolfgang), Wiser, S. K. (Susan K.), Wohlgemuth, T. (Thomas), Yamalov, S. (Sergey), Zobel, M. (Martin), Bruelheide, H. (Helge), Sabatini, F. M. (Francesco Maria), Lenoir, J. (Jonathan), Hattab, T. (Tarek), Arnst, E. A. (Elise Aimee), Chytry, M. (Milan), Dengler, J. (Juergen), De Ruffray, P. (Patrice), Hennekens, S. M. (Stephan M.), Jandt, U. (Ute), Jansen, F. (Florian), Jimenez-Alfaro, B. (Borja), Kattge, J. (Jens), Levesley, A. (Aurora), Pillar, V. D. (Valerio D.), Purschke, O. (Oliver), Sandel, B. (Brody), Sultana, F. (Fahmida), Aavik, T. (Tsipe), Acic, S. (Svetlana), Acosta, A. T. (Alicia T. R.), Agrillo, E. (Emiliano), Alvarez, M. (Miguel), Apostolova, I. (Iva), Arfin Khan, M. A. (Mohammed A. S.), Arroyo, L. (Luzmila), Attorre, F. (Fabio), Aubin, I. (Isabelle), Banerjee, A. (Arindam), Bauters, M. (Marijn), Bergeron, Y. (Yves), Bergmeier, E. (Erwin), Biurrun, I. (Idoia), Bjorkman, A. D. (Anne D.), Bonari, G. (Gianmaria), Bondareva, V. (Viktoria), Brunet, J. (Jorg), Carni, A. (Andraz), Casella, L. (Laura), Cayuela, L. (Luis), Cerny, T. (Tomas), Chepinoga, V. (Victor), Csiky, J. (Janos), Custerevska, R. (Renata), De Bie, E. (Els), de Gasper, A. L. (Andre Luis), De Sanctis, M. (Michele), Dimopoulos, P. (Panayotis), Dolezal, J. (Jiri), Dziuba, T. (Tetiana), El-Sheikh, M. A. (Mohamed Abd El-Rouf Mousa), Enquist, B. (Brian), Ewald, J. (Joerg), Fazayeli, F. (Farideh), Field, R. (Richard), Finckh, M. (Manfred), Gachet, S. (Sophie), Galan-de-Mera, A. (Antonio), Garbolino, E. (Emmanuel), Gholizadeh, H. (Hamid), Giorgis, M. (Melisa), Golub, V. (Valentin), Alsos, I. G. (Inger Greve), Grytnes, J.-A. (John-Arvid), Guerin, G. R. (Gregory Richard), Gutierrez, A. G. (Alvaro G.), Haider, S. (Sylvia), Hatim, M. Z. (Mohamed Z.), Herault, B. (Bruno), Hinojos Mendoza, G. (Guillermo), Hoelzel, N. (Norbert), Homeier, J. (Juergen), Hubau, W. (Wannes), Indreica, A. (Adrian), Janssen, J. A. (John A. M.), Jedrzejek, B. (Birgit), Jentsch, A. (Anke), Juergens, N. (Norbert), Kacki, Z. (Zygmunt), Kapfer, J. (Jutta), Karger, D. N. (Dirk Nikolaus), Kavgaci, A. (Ali), Kearsley, E. (Elizabeth), Kessler, M. (Michael), Khanina, L. (Larisa), Killeen, T. (Timothy), Korolyuk, A. (Andrey), Kreft, H. (Holger), Kuehl, H. S. (Hjalmar S.), Kuzemko, A. (Anna), Landucci, F. (Flavia), Lengyel, A. (Attila), Lens, F. (Frederic), Lingner, D. V. (Debora Vanessa), Liu, H. (Hongyan), Lysenko, T. (Tatiana), Mahecha, M. D. (Miguel D.), Marceno, C. (Corrado), Martynenko, V. (Vasiliy), Moeslund, J. E. (Jesper Erenskjold), Monteagudo Mendoza, A. (Abel), Mucina, L. (Ladislav), Muller, J. V. (Jonas V.), Munzinger, J. (Jerome), Naqinezhad, A. (Alireza), Noroozi, J. (Jalil), Nowak, A. (Arkadiusz), Onyshchenko, V. (Viktor), Overbeck, G. E. (Gerhard E.), Partel, M. (Meelis), Pauchard, A. (Anibal), Peet, R. K. (Robert K.), Penuelas, J. (Josep), Perez-Haase, A. (Aaron), Peterka, T. (Tomas), Petrik, P. (Petr), Peyre, G. (Gwendolyn), Phillips, O. L. (Oliver L.), Prokhorov, V. (Vadim), Rasomavicius, V. (Valerijus), Revermann, R. (Rasmus), Rivas-Torres, G. (Gonzalo), Rodwell, J. S. (John S.), Ruprecht, E. (Eszter), Rusina, S. (Solvita), Samimi, C. (Cyrus), Schmidt, M. (Marco), Schrodt, F. (Franziska), Shan, H. (Hanhuai), Shirokikh, P. (Pavel), Sibik, J. (Jozef), Silc, U. (Urban), Sklenar, P. (Petr), Skvorc, Z. (Zeljko), Sparrow, B. (Ben), Sperandii, M. G. (Marta Gaia), Stancic, Z. (Zvjezdana), Svenning, J.-C. (Jens-Christian), Tang, Z. (Zhiyao), Tang, C. Q. (Cindy Q.), Tsiripidis, I. (Ioannis), Vanselow, K. A. (Kim Andre), Vasquez Martinez, R. (Rodolfo), Vassilev, K. (Kiril), Velez-Martin, E. (Eduardo), Venanzoni, R. (Roberto), Vibrans, A. C. (Alexander Christian), Violle, C. (Cyrille), Virtanen, R. (Risto), von Wehrden, H. (Henrik), Wagner, V. (Viktoria), Walker, D. A. (Donald A.), Waller, D. M. (Donald M.), Wang, H.-F. (Hua-Feng), Wesche, K. (Karsten), Whitfeld, T. J. (Timothy J. S.), Willner, W. (Wolfgang), Wiser, S. K. (Susan K.), Wohlgemuth, T. (Thomas), Yamalov, S. (Sergey), Zobel, M. (Martin), and Bruelheide, H. (Helge)

Abstract

Motivation: Assessing biodiversity status and trends in plant communities is critical for understanding, quantifying and predicting the effects of global change on ecosystems. Vegetation plots record the occurrence or abundance of all plant species co-occurring within delimited local areas. This allows species absences to be inferred, information seldom provided by existing global plant datasets. Although many vegetation plots have been recorded, most are not available to the global research community. A recent initiative, called ‘sPlot’, compiled the first global vegetation plot database, and continues to grow and curate it. The sPlot database, however, is extremely unbalanced spatially and environmentally, and is not open-access. Here, we address both these issues by (a) resampling the vegetation plots using several environmental variables as sampling strata and (b) securing permission from data holders of 105 local-to-regional datasets to openly release data. We thus present sPlotOpen, the largest open-access dataset of vegetation plots ever released. sPlotOpen can be used to explore global diversity at the plant community level, as ground truth data in remote sensing applications, or as a baseline for biodiversity monitoring. Main types of variable contained: Vegetation plots (n = 95,104) recording cover or abundance of naturally co-occurring vascular plant species within delimited areas. sPlotOpen contains three partially overlapping resampled datasets (c. 50,000 plots each), to be used as replicates in global analyses. Besides geographical location, date, plot size, biome, elevation, slope, aspect, vegetation type, naturalness, coverage of various vegetation layers, and source dataset, plot-level data also include community-weighted means and variances of 18 plant functional traits from the TRY Plant Trait Database. Spatial location and grain: Global, 0.01–40,000 m². Time period and grain: 1888–2015, recording dates. Major taxa and level of measuremen

Published
2021

10. sPlot:a new tool for global vegetation analyses

Author

Bruelheide, H. (Helge), Dengler, J. (Juergen), Jimenez-Alfaro, B. (Borja), Purschke, O. (Oliver), Hennekens, S. M. (Stephan M.), Chytry, M. (Milan), Pillar, V. D. (Valerio D.), Jansen, F. (Florian), Kattge, J. (Jens), Sandel, B. (Brody), Aubin, I. (Isabelle), Biurrun, I. (Idoia), Field, R. (Richard), Haider, S. (Sylvia), Jandt, U. (Ute), Lenoir, J. (Jonathan), Peet, R. K. (Robert K.), Peyre, G. (Gwendolyn), Sabatini, F. M. (Francesco Maria), Schmidt, M. (Marco), Schrodt, F. (Franziska), Winter, M. (Marten), Acic, S. (Svetlana), Agrillo, E. (Emiliano), Alvarez, M. (Miguel), Ambarli, D. (Didem), Angelini, P. (Pierangela), Apostolova, I. (Iva), Khan, M. A. (Mohammed A. S. Arfin), Arnst, E. (Elise), Attorre, F. (Fabio), Baraloto, C. (Christopher), Beckmann, M. (Michael), Berg, C. (Christian), Bergeron, Y. (Yves), Bergmeier, E. (Erwin), Bjorkman, A. D. (Anne D.), Bondareva, V. (Viktoria), Borchardt, P. (Peter), Botta-Dukat, Z. (Zoltan), Boyle, B. (Brad), Breen, A. (Amy), Brisse, H. (Henry), Byun, C. (Chaeho), Cabido, M. R. (Marcelo R.), Casella, L. (Laura), Cayuela, L. (Luis), Cerny, T. (Tomas), Chepinoga, V. (Victor), Csiky, J. (Janos), Curran, M. (Michael), Custerevska, R. (Renata), Stevanovic, Z. D. (Zora Dajic), De Bie, E. (Els), de Ruffray, P. (Patrice), De Sanctis, M. (Michele), Dimopoulos, P. (Panayotis), Dressler, S. (Stefan), Ejrnaes, R. (Rasmus), El-Sheikh, M. A. (Mohamed Abd El-Rouf Mousa), Enquist, B. (Brian), Ewald, J. (Joerg), Fagundez, J. (Jaime), Finckh, M. (Manfred), Font, X. (Xavier), Forey, E. (Estelle), Fotiadis, G. (Georgios), Garcia-Mijangos, I. (Itziar), de Gasper, A. L. (Andre Luis), Golub, V. (Valentin), Gutierrez, A. G. (Alvaro G.), Hatim, M. Z. (Mohamed Z.), He, T. (Tianhua), Higuchi, P. (Pedro), Holubova, D. (Dana), Hoelzel, N. (Norbert), Homeier, J. (Juergen), Indreica, A. (Adrian), Gursoy, D. I. (Deniz Isik), Jansen, S. (Steven), Janssen, J. (John), Jedrzejek, B. (Birgit), Jirousek, M. (Martin), Juergens, N. (Norbert), Kacki, Z. (Zygmunt), Kavgaci, A. (Ali), Kearsley, E. (Elizabeth), Kessler, M. (Michael), Knollova, I. (Ilona), Kolomiychuk, V. (Vitaliy), Korolyuk, A. (Andrey), Kozhevnikova, M. (Maria), Kozub, L. (Lukasz), Krstonosic, D. (Daniel), Kuehl, H. (Hjalmar), Kuehn, I. (Ingolf), Kuzemko, A. (Anna), Kuzmic, F. (Filip), Landucci, F. (Flavia), Lee, M. T. (Michael T.), Levesley, A. (Aurora), Li, C.-F. (Ching-Feng), Liu, H. (Hongyan), Lopez-Gonzalez, G. (Gabriela), Lysenko, T. (Tatiana), Macanovic, A. (Armin), Mahdavi, P. (Parastoo), Manning, P. (Peter), Marceno, C. (Corrado), Martynenko, V. (Vassiliy), Mencuccini, M. (Maurizio), Minden, V. (Vanessa), Moeslund, J. E. (Jesper Erenskjold), Moretti, M. (Marco), Mueller, J. V. (Jonas V.), Munzinger, J. (Jerome), Niinemets, U. (Ulo), Nobis, M. (Marcin), Noroozi, J. (Jalil), Nowak, A. (Arkadiusz), Onyshchenko, V. (Viktor), Overbeck, G. E. (Gerhard E.), Ozinga, W. A. (Wim A.), Pauchard, A. (Anibal), Pedashenko, H. (Hristo), Penuelas, J. (Josep), Perez-Haase, A. (Aaron), Peterka, T. (Tomas), Petrik, P. (Petr), Phillips, O. L. (Oliver L.), Prokhorov, V. (Vadim), Rasomavicius, V. (Valerijus), Revermann, R. (Rasmus), Rodwell, J. (John), Ruprecht, E. (Eszter), Rusina, S. (Solvita), Samimi, C. (Cyrus), Schaminee, J. H. (Joop H. J.), Schmiedel, U. (Ute), Sibik, J. (Jozef), Silc, U. (Urban), Skvorc, Z. (Zeljko), Smyth, A. (Anita), Sop, T. (Tenekwetche), Sopotlieva, D. (Desislava), Sparrow, B. (Ben), Stancic, Z. (Zvjezdana), Svenning, J.-C. (Jens-Christian), Swacha, G. (Grzegorz), Tang, Z. (Zhiyao), Tsiripidis, I. (Ioannis), Turtureanu, P. D. (Pavel Dan), Ugurlu, E. (Emin), Uogintas, D. (Domas), Valachovic, M. (Milan), Vanselow, K. A. (Kim Andre), Vashenyak, Y. (Yulia), Vassilev, K. (Kiril), Velez-Martin, E. (Eduardo), Venanzoni, R. (Roberto), Vibrans, A. C. (Alexander Christian), Violle, C. (Cyrille), Virtanen, R. (Risto), von Wehrden, H. (Henrik), Wagner, V. (Viktoria), Walker, D. A. (Donald A.), Wana, D. (Desalegn), Weiher, E. (Evan), Wesche, K. (Karsten), Whitfeld, T. (Timothy), Willner, W. (Wolfgang), Wiser, S. (Susan), Wohlgemuth, T. (Thomas), Yamalov, S. (Sergey), Zizka, G. (Georg), Zverev, A. (Andrei), Bruelheide, H. (Helge), Dengler, J. (Juergen), Jimenez-Alfaro, B. (Borja), Purschke, O. (Oliver), Hennekens, S. M. (Stephan M.), Chytry, M. (Milan), Pillar, V. D. (Valerio D.), Jansen, F. (Florian), Kattge, J. (Jens), Sandel, B. (Brody), Aubin, I. (Isabelle), Biurrun, I. (Idoia), Field, R. (Richard), Haider, S. (Sylvia), Jandt, U. (Ute), Lenoir, J. (Jonathan), Peet, R. K. (Robert K.), Peyre, G. (Gwendolyn), Sabatini, F. M. (Francesco Maria), Schmidt, M. (Marco), Schrodt, F. (Franziska), Winter, M. (Marten), Acic, S. (Svetlana), Agrillo, E. (Emiliano), Alvarez, M. (Miguel), Ambarli, D. (Didem), Angelini, P. (Pierangela), Apostolova, I. (Iva), Khan, M. A. (Mohammed A. S. Arfin), Arnst, E. (Elise), Attorre, F. (Fabio), Baraloto, C. (Christopher), Beckmann, M. (Michael), Berg, C. (Christian), Bergeron, Y. (Yves), Bergmeier, E. (Erwin), Bjorkman, A. D. (Anne D.), Bondareva, V. (Viktoria), Borchardt, P. (Peter), Botta-Dukat, Z. (Zoltan), Boyle, B. (Brad), Breen, A. (Amy), Brisse, H. (Henry), Byun, C. (Chaeho), Cabido, M. R. (Marcelo R.), Casella, L. (Laura), Cayuela, L. (Luis), Cerny, T. (Tomas), Chepinoga, V. (Victor), Csiky, J. (Janos), Curran, M. (Michael), Custerevska, R. (Renata), Stevanovic, Z. D. (Zora Dajic), De Bie, E. (Els), de Ruffray, P. (Patrice), De Sanctis, M. (Michele), Dimopoulos, P. (Panayotis), Dressler, S. (Stefan), Ejrnaes, R. (Rasmus), El-Sheikh, M. A. (Mohamed Abd El-Rouf Mousa), Enquist, B. (Brian), Ewald, J. (Joerg), Fagundez, J. (Jaime), Finckh, M. (Manfred), Font, X. (Xavier), Forey, E. (Estelle), Fotiadis, G. (Georgios), Garcia-Mijangos, I. (Itziar), de Gasper, A. L. (Andre Luis), Golub, V. (Valentin), Gutierrez, A. G. (Alvaro G.), Hatim, M. Z. (Mohamed Z.), He, T. (Tianhua), Higuchi, P. (Pedro), Holubova, D. (Dana), Hoelzel, N. (Norbert), Homeier, J. (Juergen), Indreica, A. (Adrian), Gursoy, D. I. (Deniz Isik), Jansen, S. (Steven), Janssen, J. (John), Jedrzejek, B. (Birgit), Jirousek, M. (Martin), Juergens, N. (Norbert), Kacki, Z. (Zygmunt), Kavgaci, A. (Ali), Kearsley, E. (Elizabeth), Kessler, M. (Michael), Knollova, I. (Ilona), Kolomiychuk, V. (Vitaliy), Korolyuk, A. (Andrey), Kozhevnikova, M. (Maria), Kozub, L. (Lukasz), Krstonosic, D. (Daniel), Kuehl, H. (Hjalmar), Kuehn, I. (Ingolf), Kuzemko, A. (Anna), Kuzmic, F. (Filip), Landucci, F. (Flavia), Lee, M. T. (Michael T.), Levesley, A. (Aurora), Li, C.-F. (Ching-Feng), Liu, H. (Hongyan), Lopez-Gonzalez, G. (Gabriela), Lysenko, T. (Tatiana), Macanovic, A. (Armin), Mahdavi, P. (Parastoo), Manning, P. (Peter), Marceno, C. (Corrado), Martynenko, V. (Vassiliy), Mencuccini, M. (Maurizio), Minden, V. (Vanessa), Moeslund, J. E. (Jesper Erenskjold), Moretti, M. (Marco), Mueller, J. V. (Jonas V.), Munzinger, J. (Jerome), Niinemets, U. (Ulo), Nobis, M. (Marcin), Noroozi, J. (Jalil), Nowak, A. (Arkadiusz), Onyshchenko, V. (Viktor), Overbeck, G. E. (Gerhard E.), Ozinga, W. A. (Wim A.), Pauchard, A. (Anibal), Pedashenko, H. (Hristo), Penuelas, J. (Josep), Perez-Haase, A. (Aaron), Peterka, T. (Tomas), Petrik, P. (Petr), Phillips, O. L. (Oliver L.), Prokhorov, V. (Vadim), Rasomavicius, V. (Valerijus), Revermann, R. (Rasmus), Rodwell, J. (John), Ruprecht, E. (Eszter), Rusina, S. (Solvita), Samimi, C. (Cyrus), Schaminee, J. H. (Joop H. J.), Schmiedel, U. (Ute), Sibik, J. (Jozef), Silc, U. (Urban), Skvorc, Z. (Zeljko), Smyth, A. (Anita), Sop, T. (Tenekwetche), Sopotlieva, D. (Desislava), Sparrow, B. (Ben), Stancic, Z. (Zvjezdana), Svenning, J.-C. (Jens-Christian), Swacha, G. (Grzegorz), Tang, Z. (Zhiyao), Tsiripidis, I. (Ioannis), Turtureanu, P. D. (Pavel Dan), Ugurlu, E. (Emin), Uogintas, D. (Domas), Valachovic, M. (Milan), Vanselow, K. A. (Kim Andre), Vashenyak, Y. (Yulia), Vassilev, K. (Kiril), Velez-Martin, E. (Eduardo), Venanzoni, R. (Roberto), Vibrans, A. C. (Alexander Christian), Violle, C. (Cyrille), Virtanen, R. (Risto), von Wehrden, H. (Henrik), Wagner, V. (Viktoria), Walker, D. A. (Donald A.), Wana, D. (Desalegn), Weiher, E. (Evan), Wesche, K. (Karsten), Whitfeld, T. (Timothy), Willner, W. (Wolfgang), Wiser, S. (Susan), Wohlgemuth, T. (Thomas), Yamalov, S. (Sergey), Zizka, G. (Georg), and Zverev, A. (Andrei)

Abstract

Aims: Vegetation‐plot records provide information on the presence and cover or abundance of plants co‐occurring in the same community. Vegetation‐plot data are spread across research groups, environmental agencies and biodiversity research centers and, thus, are rarely accessible at continental or global scales. Here we present the sPlot database, which collates vegetation plots worldwide to allow for the exploration of global patterns in taxonomic, functional and phylogenetic diversity at the plant community level. Results: sPlot version 2.1 contains records from 1,121,244 vegetation plots, which comprise 23,586,216 records of plant species and their relative cover or abundance in plots collected worldwide between 1885 and 2015. We complemented the information for each plot by retrieving climate and soil conditions and the biogeographic context (e.g., biomes) from external sources, and by calculating community‐weighted means and variances of traits using gap‐filled data from the global plant trait database TRY. Moreover, we created a phylogenetic tree for 50,167 out of the 54,519 species identified in the plots. We present the first maps of global patterns of community richness and community‐weighted means of key traits. Conclusions: The availability of vegetation plot data in sPlot offers new avenues for vegetation analysis at the global scale.

Published
2019

12. Global trait:environment relationships of plant communities

Author

Bruelheide, H. (Helge), Dengler, J. (Juergen), Purschke, O. (Oliver), Lenoir, J. (Jonathan), Jimenez-Alfaro, B. (Borja), Hennekens, S. M. (Stephan M.), Botta-Dukat, Z. (Zoltan), Chytry, M. (Milan), Field, R. (Richard), Jansen, F. (Florian), Kattge, J. (Jens), Pillar, V. D. (Valerio D.), Schrodt, F. (Franziska), Mahecha, M. D. (Miguel D.), Peet, R. K. (Robert K.), Sandel, B. (Brody), van Bodegom, P. (Peter), Altman, J. (Jan), Alvarez-Davila, E. (Esteban), Khan, M. A. (Mohammed A. S. Arfin), Attorre, F. (Fabio), Aubin, I. (Isabelle), Baraloto, C. (Christopher), Barroso, J. G. (Jorcely G.), Bauters, M. (Marijn), Bergmeier, E. (Erwin), Biurrun, I. (Idoia), Bjorkman, A. D. (Anne D.), Blonder, B. (Benjamin), Carni, A. (Andraz), Cayuela, L. (Luis), Cerny, T. (Tomas), Cornelissen, J. H. (J. Hans C.), Craven, D. (Dylan), Dainese, M. (Matteo), Derroire, G. (Geraldine), De Sanctis, M. (Michele), Diaz, S. (Sandra), Dolezal, J. (Jiri), Farfan-Rios, W. (William), Feldpausch, T. R. (Ted R.), Fenton, N. J. (Nicole J.), Garnier, E. (Eric), Guerin, G. R. (Greg R.), Gutierrez, A. G. (Alvaro G.), Haider, S. (Sylvia), Hattab, T. (Tarek), Henry, G. (Greg), Herault, B. (Bruno), Higuchi, P. (Pedro), Hoelzel, N. (Norbert), Homeier, J. (Juergen), Jentsch, A. (Anke), Juergens, N. (Norbert), Kacki, Z. (Zygmunt), Karger, D. N. (Dirk N.), Kessler, M. (Michael), Kleyer, M. (Michael), Knollova, I. (Ilona), Korolyuk, A. Y. (Andrey Y.), Kuehn, I. (Ingolf), Laughlin, D. C. (Daniel C.), Lens, F. (Frederic), Loos, J. (Jacqueline), Louault, F. (Frederique), Lyubenova, M. I. (Mariyana, I), Malhi, Y. (Yadvinder), Marceno, C. (Corrado), Mencuccini, M. (Maurizio), Mueller, J. V. (Jonas, V), Munzinger, J. (Jerome), Myers-Smith, I. H. (Isla H.), Neill, D. A. (David A.), Niinemets, U. (Ulo), Orwin, K. H. (Kate H.), Ozinga, W. A. (Wim A.), Penuelas, J. (Josep), Perez-Haase, A. (Aaron), Petrik, P. (Petr), Phillips, O. L. (Oliver L.), Partel, M. (Meelis), Reich, P. B. (Peter B.), Roemermann, C. (Christine), Rodrigues, A. V. (Arthur, V), Sabatini, F. M. (Francesco Maria), Sardans, J. (Jordi), Schmidt, M. (Marco), Seidler, G. (Gunnar), Silva Espejo, J. E. (Javier Eduardo), Silveira, M. (Marcos), Smyth, A. (Anita), Sporbert, M. (Maria), Svenning, J.-C. (Jens-Christian), Tang, Z. (Zhiyao), Thomas, R. (Raquel), Tsiripidis, I. (Ioannis), Vassilev, K. (Kiril), Violle, C. (Cyrille), Virtanen, R. (Risto), Weiher, E. (Evan), Welk, E. (Erik), Wesche, K. (Karsten), Winter, M. (Marten), Wirth, C. (Christian), Jandt, U. (Ute), Bruelheide, H. (Helge), Dengler, J. (Juergen), Purschke, O. (Oliver), Lenoir, J. (Jonathan), Jimenez-Alfaro, B. (Borja), Hennekens, S. M. (Stephan M.), Botta-Dukat, Z. (Zoltan), Chytry, M. (Milan), Field, R. (Richard), Jansen, F. (Florian), Kattge, J. (Jens), Pillar, V. D. (Valerio D.), Schrodt, F. (Franziska), Mahecha, M. D. (Miguel D.), Peet, R. K. (Robert K.), Sandel, B. (Brody), van Bodegom, P. (Peter), Altman, J. (Jan), Alvarez-Davila, E. (Esteban), Khan, M. A. (Mohammed A. S. Arfin), Attorre, F. (Fabio), Aubin, I. (Isabelle), Baraloto, C. (Christopher), Barroso, J. G. (Jorcely G.), Bauters, M. (Marijn), Bergmeier, E. (Erwin), Biurrun, I. (Idoia), Bjorkman, A. D. (Anne D.), Blonder, B. (Benjamin), Carni, A. (Andraz), Cayuela, L. (Luis), Cerny, T. (Tomas), Cornelissen, J. H. (J. Hans C.), Craven, D. (Dylan), Dainese, M. (Matteo), Derroire, G. (Geraldine), De Sanctis, M. (Michele), Diaz, S. (Sandra), Dolezal, J. (Jiri), Farfan-Rios, W. (William), Feldpausch, T. R. (Ted R.), Fenton, N. J. (Nicole J.), Garnier, E. (Eric), Guerin, G. R. (Greg R.), Gutierrez, A. G. (Alvaro G.), Haider, S. (Sylvia), Hattab, T. (Tarek), Henry, G. (Greg), Herault, B. (Bruno), Higuchi, P. (Pedro), Hoelzel, N. (Norbert), Homeier, J. (Juergen), Jentsch, A. (Anke), Juergens, N. (Norbert), Kacki, Z. (Zygmunt), Karger, D. N. (Dirk N.), Kessler, M. (Michael), Kleyer, M. (Michael), Knollova, I. (Ilona), Korolyuk, A. Y. (Andrey Y.), Kuehn, I. (Ingolf), Laughlin, D. C. (Daniel C.), Lens, F. (Frederic), Loos, J. (Jacqueline), Louault, F. (Frederique), Lyubenova, M. I. (Mariyana, I), Malhi, Y. (Yadvinder), Marceno, C. (Corrado), Mencuccini, M. (Maurizio), Mueller, J. V. (Jonas, V), Munzinger, J. (Jerome), Myers-Smith, I. H. (Isla H.), Neill, D. A. (David A.), Niinemets, U. (Ulo), Orwin, K. H. (Kate H.), Ozinga, W. A. (Wim A.), Penuelas, J. (Josep), Perez-Haase, A. (Aaron), Petrik, P. (Petr), Phillips, O. L. (Oliver L.), Partel, M. (Meelis), Reich, P. B. (Peter B.), Roemermann, C. (Christine), Rodrigues, A. V. (Arthur, V), Sabatini, F. M. (Francesco Maria), Sardans, J. (Jordi), Schmidt, M. (Marco), Seidler, G. (Gunnar), Silva Espejo, J. E. (Javier Eduardo), Silveira, M. (Marcos), Smyth, A. (Anita), Sporbert, M. (Maria), Svenning, J.-C. (Jens-Christian), Tang, Z. (Zhiyao), Thomas, R. (Raquel), Tsiripidis, I. (Ioannis), Vassilev, K. (Kiril), Violle, C. (Cyrille), Virtanen, R. (Risto), Weiher, E. (Evan), Welk, E. (Erik), Wesche, K. (Karsten), Winter, M. (Marten), Wirth, C. (Christian), and Jandt, U. (Ute)

Abstract

Plant functional traits directly affect ecosystem functions. At the species level, trait combinations depend on trade-offs representing different ecological strategies, but at the community level trait combinations are expected to be decoupled from these trade-offs because different strategies can facilitate co-existence within communities. A key question is to what extent community-level trait composition is globally filtered and how well it is related to global versus local environmental drivers. Here, we perform a global, plot-level analysis of trait–environment relationships, using a database with more than 1.1 million vegetation plots and 26,632 plant species with trait information. Although we found a strong filtering of 17 functional traits, similar climate and soil conditions support communities differing greatly in mean trait values. The two main community trait axes that capture half of the global trait variation (plant stature and resource acquisitiveness) reflect the trade-offs at the species level but are weakly associated with climate and soil conditions at the global scale. Similarly, within-plot trait variation does not vary systematically with macro-environment. Our results indicate that, at fine spatial grain, macro-environmental drivers are much less important for functional trait composition than has been assumed from floristic analyses restricted to co-occurrence in large grid cells. Instead, trait combinations seem to be predominantly filtered by local-scale factors such as disturbance, fine-scale soil conditions, niche partitioning and biotic interactions.

Published
2018

18. LOTVS: A global collection of permanent vegetation plots

Author

Marta Gaia Sperandii, Francesco de Bello, Enrique Valencia, Lars Götzenberger, Manuele Bazzichetto, Thomas Galland, Anna E‐Vojtkó, Luisa Conti, Peter B. Adler, Hannah Buckley, Jiří Danihelka, Nicola J. Day, Jürgen Dengler, David J. Eldridge, Marc Estiarte, Ricardo García‐González, Eric Garnier, Daniel Gómez‐García, Lauren Hallett, Susan Harrison, Tomas Herben, Ricardo Ibáñez, Anke Jentsch, Norbert Juergens, Miklós Kertész, Duncan M. Kimuyu, Katja Klumpp, Mike Le Duc, Frédérique Louault, Rob H. Marrs, Gábor Ónodi, Robin J. Pakeman, Meelis Pärtel, Begoña Peco, Josep Peñuelas, Marta Rueda, Wolfgang Schmidt, Ute Schmiedel, Martin Schuetz, Hana Skalova, Petr Šmilauer, Marie Šmilauerová, Christian Smit, Ming‐Hua Song, Martin Stock, James Val, Vigdis Vandvik, Karsten Wesche, Susan K. Wiser, Ben A. Woodcock, Truman P. Young, Fei‐Hai Yu, Amelia A. Wolf, Martin Zobel, Jan Lepš, Centro de Investigaciones sobre Desertificacion (CIDE), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), Universidad Rey Juan Carlos [Madrid] (URJC), Institute of Botany of the Czech Academy of Sciences (IB / CAS), Czech Academy of Sciences [Prague] (CAS), UNIVERSITY OF SOUTH BOHEMIA CESKE BUDEJOVICE CZE, Partenaires IRSTEA, Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA), Czech University of Life Sciences Prague (CZU), Utah State University (USU), Auckland University of Technology (AUT), Masaryk University [Brno] (MUNI), Victoria University of Wellington, Zürich University of Applied Sciences (ZHAW), University of New South Wales [Kensington], CREAF - Centre for Ecological Research and Applied Forestries, Instituto Pirenaico de Ecologìa = Pyrenean Institute of Ecology [Zaragoza] (IPE - CSIC), Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Université Paul-Valéry - Montpellier 3 (UPVM)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), University of Oregon, Eugene, OR 97403, United States, University of California (UC), Department of Zoology, Charles University in Prague, Faculty of Science, Viniicna 7, 128 43 Praha 2, Universidad Pública de Navarra [Espagne] = Public University of Navarra (UPNA), University of Hamburg, Hungarian Academy of Sciences (MTA), University of Liverpool, Unité Mixte de Recherche sur l'Ecosystème Prairial - UMR (UREP), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), The James Hutton Institute, University of Tartu, Autonomous University of Madrid, Faculty of Sciences, Department of Ecology, 28049 Madrid, Spain, Universidad de Sevilla / University of Sevilla, Centre for Biodiversity and Sustainable Land-use [University of Göttingen] (CBL), Georg-August-University = Georg-August-Universität Göttingen, Hamburg University of Applied Sciences [Hamburg], Swiss Federal Institute for Forest, Snow and Landscape Research WSL, University of South Bohemia, Groningen Institute for Evolutionary Life Sciences [Groningen] (GELIFES), University of Groningen [Groningen], Chinese Academy of Agricultural Sciences (CAAS), Wadden Sea National Park of Schleswig-Holstein, University of Bergen (UiB), Senckenberg Museum of Natural History Görlitz, Senckenberg – Leibniz Institution for Biodiversity and Earth System Research - Senckenberg Gesellschaft für Naturforschung, Leibniz Association-Leibniz Association, Manaaki Whenua – Landcare Research [Lincoln], Center for Ecology and Hydrology, Taizhou University, University of Texas-Pan, Smit group, Royal Society of New Zealand, Czech Science Foundation, Academy of Sciences of the Czech Republic, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Institut National de la Recherche Agronomique (France), Federal Ministry of Education and Research (Germany), Oberfranken Stiftung, Agence Nationale de la Recherche (France), Scottish Government's Rural and Environment Science and Analytical Services, Estonian Research Council, European Commission, Fundación Ramón Areces, Generalitat de Catalunya, European Research Council, Dresden University of Technology, Ministry of Business, Innovation, and Employment (New Zealand), Natural Environment Research Council (UK), Biotechnology and Biological Sciences Research Council (UK), Comunidad de Madrid, Universidad Rey Juan Carlos, National Science Foundation (US), South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses [University of South Bohemia] (CENAKVA), Faculty of Fisheries and Protection of Waters [University of South Bohemia], University of South Bohemia -University of South Bohemia, Desertification Research Centre (CIDE), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC)-Universitat de València (UV), University of Bayreuth, German Centre for Integrative Biodiversity Research (iDiv), University of New South Wales [Sydney] (UNSW), Centre for Ecological Research and Forestry Applications (CREAF), Unit CREAF-CSIC-UABB, Global Ecology Unit (CREAF-CSIC-UAB), Université de Montpellier (UM), Institut de Recherche pour le Développement (IRD), Department of Mathematics, University of Oregon [Eugene], University of Oregon [Eugene], Department of Computer Science [Univ California Davis] (CS - UC Davis), University of California [Davis] (UC Davis), University of California (UC)-University of California (UC), Charles University [Prague] (CU), Distributed Events Analysis Research Group (MTA SZTAKI Hungarian Academy of Sciences), Mpala Research Centre, Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS), Université Clermont Auvergne (UCA), Institute of Computer Science [University of Tartu, Estonie], Centre de Recerca Ecològica i Aplicacions Forestals - Centre for Ecological Research and Forestry Applications, Partenaires INRAE, University of Chinese Academy of Sciences [Beijing] (UCAS), Lake Ecosystems Group [Lancaster, U.K.] (Centre for Ecology & Hydrology), Lancaster Environment Centre [Lancaster, U.K.], Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China, Department of Electrical and Computer Engineering - University of Texas (ECE), University of Texas at Austin [Austin], ANR-11-INBS-0001,ANAEE-FR,ANAEE-Services(2011), Sperandii, M. G., de Bello, F., Valencia, E., Gotzenberger, L., Bazzichetto, M., Galland, T., E-Vojtko, A., Conti, L., Adler, P. B., Buckley, H., Danihelka, J., Day, N. J., Dengler, J., Eldridge, D. J., Estiarte, M., Garcia-Gonzalez, R., Garnier, E., Gomez-Garcia, D., Hallett, L., Harrison, S., Herben, T., Ibanez, R., Jentsch, A., Juergens, N., Kertesz, M., Kimuyu, D. M., Klumpp, K., Le Duc, M., Louault, F., Marrs, R. H., Onodi, G., Pakeman, R. J., Partel, M., Peco, B., Penuelas, J., Rueda, M., Schmidt, W., Schmiedel, U., Schuetz, M., Skalova, H., Smilauer, P., Smilauerova, M., Smit, C., Song, M. -H., Stock, M., Val, J., Vandvik, V., Wesche, K., Wiser, S. K., Woodcock, B. A., Young, T. P., Yu, F. -H., Wolf, A. A., Zobel, M., and Leps, J.

Subjects
Plant communities, temporal analysis, Plant community, Plant Science, ecological succession, Permanent plot, ecoinformatic, plant communitie, Ecology and Environment, ecoinformatics, vegetation, Ecological succession, Ecoinformatics, Global scale, 577: Ökologie, time-serie, Vegetation, ecosystem stability, Ecology, time-series, Temporal analysis, permanent plot, plant diversity, plant communities, temporal analysi, 580: Pflanzen (Botanik), Plant diversity, global scale, Ecosystem stability, Permanent plots, Time-series, permanent plots, [SDE.BE]Environmental Sciences/Biodiversity and Ecology
Abstract

Analysing temporal patterns in plant communities is extremely important to quantify the extent and the consequences of ecological changes, especially considering the current biodiversity crisis. Long-term data collected through the regular sampling of permanent plots represent the most accurate resource to study ecological succession, analyse the stability of a community over time and understand the mechanisms driving vegetation change. We hereby present the LOng-Term Vegetation Sampling (LOTVS) initiative, a global collection of vegetation time-series derived from the regular monitoring of plant species in permanent plots. With 79 data sets from five continents and 7,789 vegetation time-series monitored for at least 6 years and mostly on an annual basis, LOTVS possibly represents the largest collection of temporally fine-grained vegetation time-series derived from permanent plots and made accessible to the research community. As such, it has an outstanding potential to support innovative research in the fields of vegetation science, plant ecology and temporal ecology., The authors acknowledge institutional support as follows. Nicola J. Day: Te Apārangi Royal Society of New Zealand (Rutherford Postdoctoral Fellowship). Jiří Danihelka: Czech Science Foundation (project no. 19-28491X) and Czech Academy of Sciences (project no. RVO 67985939). Francesco de Bello: Spanish Plan Nacional de I+D+i (project PGC2018-099027-B-I00). Eric Garnier: La Fage INRA experimental station. Tomáš Herben: GAČR grant 20-02901S. Anke Jentsch: German Federal Ministry of Education and Research (grant 031B0516C - SUSALPS) and Oberfrankenstiftung (grant OFS FP00237). Norbert Juergens: German Federal Ministry of Education and Research (grant 01LG1201N - SASSCAL ABC). Frédérique Louault and Katja Klumpp: AnaEE-France (ANR-11-INBS-0001). Robin J. Pakeman: Strategic Research Programme of the Scottish Government's Rural and Environment Science and Analytical Services Division. Meelis Pärtel: Estonian Research Council (PRG609) and European Regional Development Fund (Centre of Excellence EcolChange). Josep Peñuelas: Spanish Government (grant PID2019-110521GB-I00), Fundación Ramon Areces (grant ELEMENTAL-CLIMATE), Catalan Government (grant SGR 2017-1005), and European Research Council (Synergy grant ERC-SyG-2013-610028, IMBALANCE-P). Ute Schmiedel: German Federal Ministry of Education and Research (Promotion numbers 01LC0024, 01LC0024A, 01LC0624A2, 01LG1201A, 01LG1201N). Hana Skálová: GAČR grant 20-02901S. Karsten Wesche: International Institute Zittau, Technische Universität Dresden. Susan K. Wiser: New Zealand Ministry for Business, Innovation and Employment’s Strategic Science Investment Fund. Ben A. Woodcock: NERC and BBSRC (NE/N018125/1 LTS-M ASSIST - Achieving Sustainable Agricultural Systems). Enrique Valencia: Program for attracting and retaining talent of Comunidad de Madrid (no. 2017-T2/AMB-5406) and Community of Madrid and Rey Juan Carlos University (Young Researchers R&D Project. Ref. M2165 – INTRANESTI). Truman P. Young: National Science Foundation (LTREB DEB 19-31224).

Published
2022
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19. Inpatients' understanding of the hospitalist role and common medical terminology.

Author

Curatola N, Juergens N, Atkinson MK, Schnipper JL, Weiss R, Cohen EY, Cimino J, To C, Bambury EA, Barkoudah E, Mani S, Khalil H, Mora R, Maru J, and Harrison JD

Subjects
Humans, Cross-Sectional Studies, Male, Female, Middle Aged, Aged, Adult, Comprehension, Physician's Role, Surveys and Questionnaires, Hospitalists, Terminology as Topic, Inpatients
Abstract

Many patients are unable to identify members of their hospital care team and experience confusion regarding some medical terminology used during hospitalization, including descriptions of the structure of their inpatient care team. This cross-sectional study sought to (1) examine inpatients' understanding of the role of a hospitalist and (2) assess inpatients' familiarity with other medical terminology commonly used in the hospital. We surveyed 172 patients admitted to the hospital medicine service at two academic medical centers. We found that almost half (47%) of respondents were unfamiliar with the term and/or role of a hospitalist, while the remaining patients had varied understanding of the role. Several other medical terms were frequently misunderstood (such as "NPO," "PA," and "Attending"). Ongoing efforts are needed to improve communication to ensure that hospitalized patients understand the hospitalist's role and the medical terms shared with them., (© 2024 Society of Hospital Medicine.)

Published
2025
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20. A global biodiversity observing system to unite monitoring and guide action.

Author

Gonzalez A, Vihervaara P, Balvanera P, Bates AE, Bayraktarov E, Bellingham PJ, Bruder A, Campbell J, Catchen MD, Cavender-Bares J, Chase J, Coops N, Costello MJ, Czúcz B, Delavaud A, Dornelas M, Dubois G, Duffy EJ, Eggermont H, Fernandez M, Fernandez N, Ferrier S, Geller GN, Gill M, Gravel D, Guerra CA, Guralnick R, Harfoot M, Hirsch T, Hoban S, Hughes AC, Hugo W, Hunter ME, Isbell F, Jetz W, Juergens N, Kissling WD, Krug CB, Kullberg P, Le Bras Y, Leung B, Londoño-Murcia MC, Lord JM, Loreau M, Luers A, Ma K, MacDonald AJ, Maes J, McGeoch M, Mihoub JB, Millette KL, Molnar Z, Montes E, Mori AS, Muller-Karger FE, Muraoka H, Nakaoka M, Navarro L, Newbold T, Niamir A, Obura D, O'Connor M, Paganini M, Pelletier D, Pereira H, Poisot T, Pollock LJ, Purvis A, Radulovici A, Rocchini D, Roeoesli C, Schaepman M, Schaepman-Strub G, Schmeller DS, Schmiedel U, Schneider FD, Shakya MM, Skidmore A, Skowno AL, Takeuchi Y, Tuanmu MN, Turak E, Turner W, Urban MC, Urbina-Cardona N, Valbuena R, Van de Putte A, van Havre B, Wingate VR, Wright E, and Torrelio CZ

Subjects
Biodiversity, Ecosystem
Published
2023
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21. Author Correction: A global biodiversity observing system to unite monitoring and guide action.

Author

Gonzalez A, Vihervaara P, Balvanera P, Bates AE, Bayraktarov E, Bellingham PJ, Bruder A, Campbell J, Catchen MD, Cavender-Bares J, Chase J, Coops N, Costello MJ, Czúcz B, Delavaud A, Dornelas M, Dubois G, Duffy EJ, Eggermont H, Fernandez M, Fernandez N, Ferrier S, Geller GN, Gill M, Gravel D, Guerra CA, Guralnick R, Harfoot M, Hirsch T, Hoban S, Hughes AC, Hugo W, Hunter ME, Isbell F, Jetz W, Juergens N, Kissling WD, Krug CB, Kullberg P, Le Bras Y, Leung B, Londoño-Murcia MC, Lord JM, Loreau M, Luers A, Ma K, MacDonald AJ, Maes J, McGeoch M, Mihoub JB, Millette KL, Molnar Z, Montes E, Mori AS, Muller-Karger FE, Muraoka H, Nakaoka M, Navarro L, Newbold T, Niamir A, Obura D, O'Connor M, Paganini M, Pelletier D, Pereira H, Poisot T, Pollock LJ, Purvis A, Radulovici A, Rocchini D, Roeoesli C, Schaepman M, Schaepman-Strub G, Schmeller DS, Schmiedel U, Schneider FD, Shakya MM, Skidmore A, Skowno AL, Takeuchi Y, Tuanmu MN, Turak E, Turner W, Urban MC, Urbina-Cardona N, Valbuena R, Van de Putte A, van Havre B, Wingate VR, Wright E, and Torrelio CZ

Published
2023
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22. Inpatient Understanding of Their Care Team and Receipt of Mixed Messages: a Two-Site Cross-Sectional Study.

Author

Atkinson MK, Wazir M, Barkoudah E, Khalil H, Mani S, Harrison JD, Yao-Cohen E, Weiss R, To C, Bambury EA, Cimino J, Mora R, Maru J, Curatola N, Juergens N, and Schnipper JL

Subjects
Humans, Cross-Sectional Studies, Hospitalization, Patient Care Team, Inpatients, Physicians
Abstract

Background: Patient understanding of their care, supported by physician involvement and consistent communication, is key to positive health outcomes. However, patient and care team characteristics can hinder this understanding., Objective: We aimed to assess inpatients' understanding of their care and their perceived receipt of mixed messages, as well as the associated patient, care team, and hospitalization characteristics., Design: We administered a 30-item survey to inpatients between February 2020 and November 2021 and incorporated other hospitalization data from patients' health records., Participants: Randomly selected inpatients at two urban academic hospitals in the USA who were (1) admitted to general medicine services and (2) on or past the third day of their hospitalization., Main Measures: Outcome measures include (1) knowledge of main doctor and (2) frequency of mixed messages. Potential predictors included mean notes per day, number of consultants involved in the patient's care, number of unit transfers, number of attending physicians, length of stay, age, sex, insurance type, and primary race., Key Results: A total of 172 patients participated in our survey. Most patients were unaware of their main doctor, an issue related to more daily interactions with care team members. Twenty-three percent of patients reported receiving mixed messages at least sometimes, most often between doctors on the primary team and consulting doctors. However, the likelihood of receiving mixed messages decreased with more daily interactions with care team members., Conclusions: Patients were often unaware of their main doctor, and almost a quarter perceived receiving mixed messages about their care. Future research should examine patients' understanding of different aspects of their care, and the nature of interactions that might improve clarity around who's in charge while simultaneously reducing the receipt of mixed messages., (© 2023. The Author(s), under exclusive licence to Society of General Internal Medicine.)

Published
2023
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23. Evolution at the arid extreme: the influence of climate on sand termite colonies and fairy circles of the Namib Desert.

Author

Juergens N, Groengroeft A, and Gunter F

Subjects
Animals, Sand, Soil chemistry, Desert Climate, Water, Ecosystem, Isoptera
Abstract

In the hyperarid Namib Desert, the sand termite Psammotermes allocerus Silvestri, 1908 (Isoptera: Rhinotermitidae) establishes colonies that create conspicuous, barren patches known as 'fairy circles' on permeable, sandy soils. The central bare areas of fairy circles serve the key function of storing moisture received from sparse rainfall. The sandy soil texture allows rapid infiltration and percolation of precipitation, while localized herbivory by the termites creates the bare patch, thereby reducing the rapid loss of soil moisture by the uptake and transpiration of water by plants. The resulting storage of rain water even during prolonged periods of drought enables perennial life in hyperarid desert environments and forms a globally unique example of ecosystem engineering by social insects. During the past decade, most publications primarily debated the origin of fairy circles. Here, we contribute to the special issue with a focus on the functional and evolutionary dimension of the structure of the Psammotermes colony with two differing nest types and two spatially separated key resources, as a successful adaptation to extreme desert environment. The paper is primarily a review and a synthesis of previous work, with the inclusion of new, relevant findings. This article is part of the theme issue 'The evolutionary ecology of nests: a cross-taxon approach'.

Published
2023
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24. Functional trait trade-offs define plant population stability across different biomes.

Author

Conti L, Valencia E, Galland T, Götzenberger L, Lepš J, E-Vojtkó A, Carmona CP, Májeková M, Danihelka J, Dengler J, Eldridge DJ, Estiarte M, García-González R, Garnier E, Gómez D, Hadincová V, Harrison SP, Herben T, Ibáñez R, Jentsch A, Juergens N, Kertész M, Klumpp K, Krahulec F, Louault F, Marrs RH, Ónodi G, Pakeman RJ, Pärtel M, Peco B, Peñuelas J, Rueda M, Schmidt W, Schmiedel U, Schuetz M, Skalova H, Šmilauer P, Šmilauerová M, Smit C, Song M, Stock M, Val J, Vandvik V, Ward D, Wesche K, Wiser SK, Woodcock BA, Young TP, Yu FH, Zobel M, and de Bello F

Subjects
Phylogeny, Seeds, Phenotype, Plant Leaves, Ecosystem, Plants
Abstract

Ecological theory posits that temporal stability patterns in plant populations are associated with differences in species' ecological strategies. However, empirical evidence is lacking about which traits, or trade-offs, underlie species stability, especially across different biomes. We compiled a worldwide collection of long-term permanent vegetation records (greater than 7000 plots from 78 datasets) from a large range of habitats which we combined with existing trait databases. We tested whether the observed inter-annual variability in species abundance (coefficient of variation) was related to multiple individual traits. We found that populations with greater leaf dry matter content and seed mass were more stable over time. Despite the variability explained by these traits being low, their effect was consistent across different datasets. Other traits played a significant, albeit weaker, role in species stability, and the inclusion of multi-variate axes or phylogeny did not substantially modify nor improve predictions. These results provide empirical evidence and highlight the relevance of specific ecological trade-offs, i.e. in different resource-use and dispersal strategies, for plant populations stability across multiple biomes. Further research is, however, necessary to integrate and evaluate the role of other specific traits, often not available in databases, and intraspecific trait variability in modulating species stability.

Published
2023
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25. The association between video or telephone telemedicine visit type and orders in primary care.

Author

Juergens N, Huang J, Gopalan A, Muelly E, and Reed M

Subjects
Humans, Delivery of Health Care methods, Telephone, Primary Health Care, COVID-19, Telemedicine
Abstract

Introduction: Telemedicine is increasingly relied upon for care delivery in primary care, but the impact of visit type on clinical ordering behavior is uncertain., Methods: Within Kaiser Permanente Northern California, we identified patients who self-scheduled and completed telemedicine encounters with their personal primary care provider or another available primary care provider in the same medical group, between April 1st, 2020, and October 31st, 2020, while physical distancing restrictions for COVID-19 were in place. We collected patient sociodemographic and clinical characteristics, measures of technology access, and categorized the most common primary encounter diagnoses. We measured proportions of patient-scheduled video versus telephone visits for each of eight diagnosis groups (Skin & Soft Tissue, Musculoskeletal Pain, Back Pain, General Gastrointestinal, Hypertension & Diabetes, Mental Health, Upper Respiratory, and Abdominal Pain), and compared physician orders for medications, antibiotics, lab and imaging studies by visit type within each diagnosis group., Results: There were 273,301 included encounters, with 86,676 (41.5%) video visits and 122,051 (58.5%) telephone visits. Of the diagnosis groups, Skin & Soft Tissue conditions had the highest proportion of video visits (59.7%), while Mental Health conditions had the highest proportion of telephone visits (71.1%). After adjusting for covariates, the overall rates of medication orders (46.6% vs. 44.5%), imaging orders (17.3% vs. 14.9%), lab orders (19.5% vs. 17.2%), and antibiotic orders (7.5% vs. 5.2%) were higher during video visits as compared to telephone visits (p < 0.05). The largest difference within diagnosis groups was for Skin & Soft Tissue conditions, where the rate of medication orders was 9.1% higher than during video visits than telephone visits (45.5% vs. 36.5%, p < 0.05)., Conclusions: We observed statistically significant differences in clinician orders by visit type during telemedicine encounters for common primary care conditions. Our findings suggest that, for certain conditions, visual information conveyed during video visits may promote clinical work-up and treatment., (© 2022. The Author(s).)

Published
2022
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26. Downstream Acute Care Utilization Following Initial Prescription of an Opioid Pain Reliever Among Emergency Department Patients With Low-Severity Conditions.

Author

Juergens N, Wei J, Cullen E, Graubard M, Gupta VK, Weintraub MR, and Sax D

Subjects
Adolescent, Adult, Female, Humans, Male, Middle Aged, Pain drug therapy, Prescriptions, Retrospective Studies, Young Adult, Analgesics, Opioid therapeutic use, Emergency Service, Hospital
Abstract

Introduction: We sought to investigate the association between receipt of an opioid pain reliever (OPR) in the emergency department (ED) and downstream acute health care utilization., Methods: Within Kaiser Permanente Northern California, we identified opioid-naïve patients, ages 18-64, who were treated and discharged from the ED for a painful, low-severity condition between January 1, 2017, and December 31, 2017. We also identified patients who received an OPR, either administered in the ED or obtained at a Kaiser Permanente Northern California pharmacy within 7 days of ED arrival, and investigated subsequent acute care utilization in cases with at least 1 ED, urgent care, or inpatient visit within 1 month or 3 months of the index encounter or 2 visits within 12 months., Results: Of the 39,468 adults included in our study, 50.7% were female, 55.0% were non-White, and 25.2% received an OPR in association with their index ED encounter. After adjustment, we found that patients who received an OPR had greater odds of downstream acute care utilization than those who did not, with odds ratios of 1.68, 1.53, and 1.50 at 1, 3, and 12 months, respectively (all p < 0.05)., Conclusion: Patients who received an OPR at their index encounter had substantially increased odds of a subsequent ED, urgent care, or inpatient visit. This effect was most pronounced early in follow-up and persisted for the duration of the study period. Receipt of an OPR among opioid-naïve adults for a painful, low-severity condition is associated with increased downstream acute care utilization.

Published
2022
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27. Synchrony matters more than species richness in plant community stability at a global scale.

Author

Valencia E, de Bello F, Galland T, Adler PB, Lepš J, E-Vojtkó A, van Klink R, Carmona CP, Danihelka J, Dengler J, Eldridge DJ, Estiarte M, García-González R, Garnier E, Gómez-García D, Harrison SP, Herben T, Ibáñez R, Jentsch A, Juergens N, Kertész M, Klumpp K, Louault F, Marrs RH, Ogaya R, Ónodi G, Pakeman RJ, Pardo I, Pärtel M, Peco B, Peñuelas J, Pywell RF, Rueda M, Schmidt W, Schmiedel U, Schuetz M, Skálová H, Šmilauer P, Šmilauerová M, Smit C, Song M, Stock M, Val J, Vandvik V, Ward D, Wesche K, Wiser SK, Woodcock BA, Young TP, Yu FH, Zobel M, and Götzenberger L

Subjects
Carbon Sequestration, Climate Change, Ecosystem, Plant Development, Plants metabolism, Soil chemistry, Plants classification
Abstract

The stability of ecological communities is critical for the stable provisioning of ecosystem services, such as food and forage production, carbon sequestration, and soil fertility. Greater biodiversity is expected to enhance stability across years by decreasing synchrony among species, but the drivers of stability in nature remain poorly resolved. Our analysis of time series from 79 datasets across the world showed that stability was associated more strongly with the degree of synchrony among dominant species than with species richness. The relatively weak influence of species richness is consistent with theory predicting that the effect of richness on stability weakens when synchrony is higher than expected under random fluctuations, which was the case in most communities. Land management, nutrient addition, and climate change treatments had relatively weak and varying effects on stability, modifying how species richness, synchrony, and stability interact. Our results demonstrate the prevalence of biotic drivers on ecosystem stability, with the potential for environmental drivers to alter the intricate relationship among richness, synchrony, and stability., Competing Interests: The authors declare no competing interest.

Published
2020
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28. Secular Trends in Long-Term Oral Bisphosphonate Use.

Author

Juergens N, Ettinger B, Hui R, Chandra M, and Lo JC

Subjects
Administration, Oral, Aged, Drug Administration Schedule, Female, Humans, Middle Aged, Osteoporosis epidemiology, Osteoporosis prevention & control, Bone Density Conservation Agents administration & dosage, Diphosphonates administration & dosage, Medication Adherence
Published
2019
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29. DNA methylation in the medial prefrontal cortex regulates alcohol-induced behavior and plasticity.

Author

Barbier E, Tapocik JD, Juergens N, Pitcairn C, Borich A, Schank JR, Sun H, Schuebel K, Zhou Z, Yuan Q, Vendruscolo LF, Goldman D, and Heilig M

Subjects
Animals, Choice Behavior, Conditioning, Operant, DNA Methylation drug effects, Disease Models, Animal, Enzyme Inhibitors pharmacology, Ethanol administration & dosage, Gene Expression Profiling, Male, Methyltransferases metabolism, Nerve Tissue Proteins metabolism, Phthalimides pharmacology, Rats, Rats, Wistar, Self Administration, Statistics, Nonparametric, Synaptotagmin II genetics, Synaptotagmin II metabolism, Transduction, Genetic, Tryptophan analogs & derivatives, Tryptophan pharmacology, Alcoholism pathology, Alcoholism physiopathology, DNA Methylation physiology, Neuronal Plasticity physiology, Prefrontal Cortex metabolism, Prefrontal Cortex pathology
Abstract

Recent studies have suggested an association between alcoholism and DNA methylation, a mechanism that can mediate long-lasting changes in gene transcription. Here, we examined the contribution of DNA methylation to the long-term behavioral and molecular changes induced by a history of alcohol dependence. In search of mechanisms underlying persistent rather than acute dependence-induced neuroadaptations, we studied the role of DNA methylation regulating medial prefrontal cortex (mPFC) gene expression and alcohol-related behaviors in rats 3 weeks into abstinence following alcohol dependence. Postdependent rats showed escalated alcohol intake, which was associated with increased DNA methylation as well as decreased expression of genes encoding synaptic proteins involved in neurotransmitter release in the mPFC. Infusion of the DNA methyltransferase inhibitor RG108 prevented both escalation of alcohol consumption and dependence-induced downregulation of 4 of the 7 transcripts modified in postdependent rats. Specifically, RG108 treatment directly reversed both downregulation of synaptotagmin 2 (Syt2) gene expression and hypermethylation on CpG#5 of its first exon. Lentiviral inhibition of Syt2 expression in the mPFC increased aversion-resistant alcohol drinking, supporting a mechanistic role of Syt2 in compulsive-like behavior. Our findings identified a functional role of DNA methylation in alcohol dependence-like behavioral phenotypes and a candidate gene network that may mediate its effects. Together, these data provide novel evidence for DNA methyltransferases as potential therapeutic targets in alcoholism., (Copyright © 2015 the authors 0270-6474/15/356153-12$15.00/0.)

Published
2015
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30. The NK1 receptor antagonist L822429 reduces heroin reinforcement.

Author

Barbier E, Vendruscolo LF, Schlosburg JE, Edwards S, Juergens N, Park PE, Misra KK, Cheng K, Rice KC, Schank J, Schulteis G, Koob GF, and Heilig M

Subjects
Animals, Heroin antagonists & inhibitors, Male, Motivation drug effects, Motivation physiology, Piperidines pharmacology, Rats, Rats, Wistar, Receptors, Neurokinin-1 physiology, Self Administration, Behavior, Addictive prevention & control, Behavior, Addictive psychology, Heroin administration & dosage, Piperidines therapeutic use, Receptors, Neurokinin-1 metabolism, Reinforcement, Psychology
Abstract

Genetic deletion of the neurokinin 1 receptor (NK1R) has been shown to decrease the reinforcing properties of opioids, but it is unknown whether pharmacological NK1R blockade has the same effect. Here, we examined the effect of L822429, a rat-specific NK1R antagonist, on the reinforcing properties of heroin in rats on short (1 h: ShA) or long (12 h: LgA) access to intravenous heroin self-administration. ShA produces heroin self-administration rates that are stable over time, whereas LgA leads to an escalation of heroin intake thought to model important dependence-related aspects of addiction. L822429 reduced heroin self-administration and the motivation to consume heroin, measured using a progressive-ratio schedule, in both ShA and LgA rats. L822429 also decreased anxiety-like behavior in both groups, measured on the elevated plus maze, but did not affect mechanical hypersensitivity observed in LgA rats. Expression of TacR1 (the gene encoding NK1R) was decreased in reward- and stress-related brain areas both in ShA and LgA rats compared with heroin-naïve rats, but did not differ between the two heroin-experienced groups. In contrast, passive exposure to heroin produced increases in TacR1 expression in the prefrontal cortex and nucleus accumbens. Taken together, these results show that pharmacological NK1R blockade attenuates heroin reinforcement. The observation that animals with ShA and LgA to heroin were similarly affected by L822429 indicates that the SP/NK1R system is not specifically involved in neuroadaptations that underlie escalation resulting from LgA self-administration. Instead, the NK1R antagonist appears to attenuate acute, positively reinforcing properties of heroin and may be useful as an adjunct to relapse prevention in detoxified opioid-dependent subjects.

Published
2013
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