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Abstract Background Freshwater mussels are important keystone and indicator species of aquatic ecosystems. Recent advances in sensor technology facilitate applications to individually track mussels and to record and monitor their behavior and physiology. These approaches require the attachment of sensor devices as “backpacks” to the outer shell surface. The interpretation of such data makes it necessary to understand the influence of these attachments on the horizontal and vertical movement behaviors of freshwater mussels. Over a series of mesocosm experiments, this study systematically investigated the effects of three size- and wiring-specific variants of artificially attached backpacks on the horizontal and vertical movement behavior of Anodonta anatina. Results Across all experiments, equipping mussels with backpacks did not result in a significant influence on horizontal movement for any of the backpack variants. In contrast to this finding, the big backpacks with a high ratio between backpack volume and mussel length resulted in a significantly negative effect on vertical movement, indicating a potential for adverse effects of such devices on mussels, especially in natural settings. Conclusions The findings of this study show that assessing the effects of attached devices on mussels requires a species-specific evaluation of potential impacts on the endpoints of interest. Especially for vertical movement patterns, selection of the smallest available devices appears mandatory.

Abstract Originating from the Black and Caspian seas, the Round Goby (Neogobius melanostomus) has become one of the most successful invaders of freshwater ecosystems. In this study, we provide a characterization of the reproductive strategy of an established population of Round Gobies in the Upper Danube river including sex ratio, fluctuations of gonadosomatic index (GSI), analysis of timing of spawning as well as of clutch and egg size. We compare these results to other studies from the native and invaded range. In the Danube, the Round Goby population was found to be female dominated, however fluctuations in magnitude of female bias were observed between months. Monitoring of the population across 1.5 years revealed that GSI was highest from April to June, while lowest values were observed in August and September. Using time‐series analysis, a delayed effect of temperature on GSI was found for females and males, while a quicker response of GSI levels to photoperiod and discharge was observed for females. GSI increased with body size for females and eggs were found to be significantly larger in May, however clutch sizes did not differ between months. Results of a literature review revealed great differences in timing and length of spawning season as well as sex ratio between populations throughout the distribution range, which can probably be explained by climatic and photoperiodic conditions together with the time since invasion and the high plasticity of Round Gobies.

Abstract Ecosystem services (ES) are essential to sustainable development at multiple spatial scales. Monitoring ES potential (ESP) at the metropolitan level is imperative to sustainable cities. We developed a procedure for long-term monitoring of metropolitan ESP dynamics, utilizing open-source land use land cover (LULC) data and the expert matrix method. We compared the ESP results of 38 European Capital Metropolitan Areas (ECMA) regarding biodiversity integrity, drinking water provision, flood protection, air quality, water purification, and recreation & tourism. Our results show significant declines in ESP across ECMA due to LULC alteration between 2006, 2012, and 2018. We found that ECMA in post-socialist European countries like Poland (Warszawa) have experienced high rates of land use transformation with a remarkable impact on ESP. Surprisingly, we found that Fennoscandinan ECMA, like Helsinki, Stockholm, and Oslo which lead the cumulative ESP ranking, faced the ESP reduction of the highest impact in recent years. The correlation analysis of ESP dynamics to urban expansion and population growth rates suggests that inattentive urbanization processes impact ESP more than population growth. We unveil the implications of our results to the EU and global level agendas like the European Nature Conservation Law and the Sustainable Development Goals.

Science education often aims to increase learners’ acquisition of fundamental principles, such as learning the basic steps of scientific methods. Worked examples (WE) have proven particularly useful for supporting the development of such cognitive schemas and successive actions in order to avoid using up more cognitive resources than are necessary. Therefore, we investigated the extent to which heuristic WE are beneficial for supporting the acquisition of a basic scientific methodological skill—conducting scientific observation. The current study has a one-factorial, quasi-experimental, comparative research design and was conducted as a field experiment. Sixty two students of a German University learned about scientific observation steps during a course on applying a fluvial audit, in which several sections of a river were classified based on specific morphological characteristics. In the two experimental groups scientific observation was supported either via faded WE or via non-faded WE both presented as short videos. The control group did not receive support via WE. We assessed factual and applied knowledge acquisition regarding scientific observation, motivational aspects and cognitive load. The results suggest that WE promoted knowledge application: Learners from both experimental groups were able to perform the individual steps of scientific observation more accurately. Fading of WE did not show any additional advantage compared to the non-faded version in this regard. Furthermore, the descriptive results reveal higher motivation and reduced extraneous cognitive load within the experimental groups, but none of these differences were statistically significant. Our findings add to existing evidence that WE may be useful to establish scientific competences.

Abstract The African Niger Delta is among the world’s most important wetlands in which the ecological effects of intensive oil exploitation and global change are not well documented. We characterized the seasonal dynamics and pollution with total-petroleum-hydrocarbons (TPHs), heavy-metals (HMs) and nutrient-loads in relation to climate-driven variables. High TPH concentrations up to 889 mg/L and HMs up to 13.119 mg/L were found in water samples, with pronounced spatio-temporal variation throughout the year. HM pollution index and contamination factor indicate serious ecological and human health hazards, especially for Cd, Cu, Hg, and Ni. Significant differences in TPHs/HMs were observed between sites and seasons, with correlations between TPHs-HMs, and climate-variables and TPHs-HMs. Nutrient levels, turbidity, salinity, temperature, and SO4 2- were high and interlinked with the variability of TPHs/HMs being greatest during wet season. These findings suggest an urgent need for improved pollution control in the Niger Delta taking into account the observed spatio-temporal variation and the exacerbation of effects in light of climate change. Given the high levels of contamination, further assessments of exposure effects and bioaccumulation in biota should include future climate change scenarios and effects on humans who intensively depend on the system for drinking water, food supply and livelihood.

Abstract Freshwater fish populations are in steep decline, prompting conservation measures and a need for their evaluation. Fish are increasingly monitored with passive integrated transponders (PIT), although the suitability of this tagging technique has not yet been validated for most European target species of conservation. Consequently, this study tested the effect of commonly used 12 mm full-duplex (FDX) PIT tags implanted into the abdominal cavity of common nase (Chondrostoma nasus L.) and European barbel (Barbus barbus L.). A controlled laboratory setup was used to compare survival, growth (both length and weight) and tag retention for two different size classes of sub-adults over 61 days. Survival in the treatment groups was high (96.7–100%) and not statistically different from the control groups (97.5–100%). Highest mortality occurred in small tagged barbel (n = 4; 96.7% survival), while no mortality occurred in large tagged nase. Mean growth rates for tagged fish (2.28 mm, 3.26 g) were similar to those of control fish (2.77 mm, 3.59 g). Overall tag retention rate was 99.0% and tag loss only occurred in nase. The results of this study demonstrate the suitability of PIT injection in the body cavity of nase and barbel > 100 mm TL, which is of high methodological importance given the increasing role these species play in PIT tag-based assessments of freshwater fish conservation in European rivers.

Water surface roughness (SR) is a highly relevant parameter governing data reliability in remote sensing applications, yet lacking appropriate methodology in riverine habitats. In order to assess thermal accuracy linked to SR of thermal imaging derived from an unmanned aerial vehicle (UAV), we developed the SR Measurement Device (SRMD). The SRMD uses the concept of in situ quantification of wave frequency and wave amplitude. Data of nine installed SRMDs in four different fluvial mesohabitat classes presented a range of 0 to 47 waves per 30 s and an amplitude range of 0 to 6 cm. Even subtle differences between mesohabitat classes run, riffle, and no-/low-flow still and pool areas could be detected with the SRMD. However, SR revealed no significant influence on the accuracy of thermal infrared (TIR) imagery data in our study case. Overall, the presented device expands existing methods of riverine habitat assessments and has the potential to produce highly relevant data of SR for various ecological and technical applications, ranging from remote sensing of surface water and habitat quality characterizations to bank stability and erosion risk assessments.

Aquaculture mollusc production is predominantly from Asia, with more than 80% of the total biomass produced in China. Vietnam’s annual mollusc production is growing rapidly but is comparatively small given its coastal resources. A significant challenge for future mollusc production, and oysters in particular, is the supply of high-quality spat. Most mollusc spat in Vietnam comes from local wild sources or is imported from China. Particularly in the case of oysters, where wild collection is low and importation of oyster spat into Vietnam from other jurisdictions is not controlled, supply is unreliable and presents a biosecurity risk to the industry. Controlling the life cycle in hatcheries can increase the sustainability and reliability of spat supply with the advantages of genetic enhancement in the long term. Beyond well-established selection methods based on phenotypic data for pedigreed families, the rapid development of genomic technology has enabled innovation in hatchery production based on genetic programs. This technology allows greater insight into oyster genetics in intensive aquaculture production systems. Recent reviews of selection programs demonstrate that inbreeding control via mate selection is an effective strategy for oyster species. Genetic response through combinations of individual and family-based selection can enhance morphometric traits by 10% per generation and disease resistance by 15% per generation in many aquaculture species. Genomic techniques provide information for selecting candidates at an earlier stage and improve prediction accuracy. In this paper, we review the literature on popular genomic tools and breeding techniques used for molluscs, focusing on the Portuguese oyster, Crassostrea angulata. This is to better comprehend how modern quantitative and molecular genetic technologies are being applied in mollusc breeding programs. It considers opportunities for and the feasibility of using genomic-based selection as well as the challenges that are faced in breeding programs transitioning to these new methods.

Introduction: Hydropower plants are frequently equipped with physical and behavioral fish protection barriers to prevent downstream moving fish from harmful turbine passage and to guide them to alternative bypasses. As not only diadromous but also potamodromous fish species migrate and inevitably have to pass hydropower plants, knowledge on corridor usage for a wide range of species is important to identify potential deficits and to improve bypass efficiency.Methods: In this study, the corridor usage of downstream moving fish (6,646 individuals from 42 species) was investigated at four small-scale hydropower plants with different concepts to prevent turbine entrainment and to bypass fish.Results: Despite existing bypasses and fine screens with 15 mm and 20 mm bar spacing to prevent turbine entrainment, a large proportion of fish (35%–88%) still passed the turbines. The mainly poor efficiency of the investigated bypasses was probably due to low discharge and unfavorable bypass location or detectability. The various bypass types were used by a different range of fish species and sizes due to species-specific behavior and differing fish communities between sites. The effectiveness of the investigated downstream corridors was positively correlated with the share of discharge.Discussion: To reduce the negative ecological impacts of hydropower plants on downstream moving fish, well-performing bypasses are required that consider not only current requirements regarding design, dimensioning and location, but also the site-specific fish community. Thus, bypasses should function for the widest possible range of species, which can be achieved through less selective bypass types such as full-depth bypasses, or a combination of different bypass systems. Moreover, less harmful turbine technologies and more effective fish protection systems need to be implemented, since fine screens with 15 mm and 20 mm bar spacing cannot prevent small-bodied fish species and juvenile fish

Groundwater-influenced ditches, so called hinterland drainage systems (HDS), accompany many heavily modified water bodies (HMWBs). Herein, we evaluate the usefulness of including HDS as functional habitats in river restoration approaches by assessing their role as salmonid recruitment areas in HMWBs. We tested the functionality of spawning grounds in a groundwater-influenced HDS compared to the quality of those not influenced by groundwater (OHB 1 and OHB 2), based on bioindication using brown trout eggs. Eggs were placed in each compartment of a two-layered container of 20 cm diameter and 30 cm total depth (known as the HydroEcoSedimentary Tool or HEST) pre-filled with sediment, mimicking hyporheic conditions. A total of 81 HESTs were evenly distributed across the three sites to assess egg and larvae mortality whilst exposed at two substrate depths (5–10 cm and 17–22 cm). In addition, key physico-chemical variables such as dissolved oxygen, temperature, pH, turbidity, electric conductance and substratum composition were analyzed. Mean egg mortality in the HDS was 33% lower than in both non-groundwater-influenced spawning grounds, whereas mean larval mortality was highest in the HDS (95%) compared to 74% at OHB 1 and 66% at OHB 2. The exposure depth of eggs had a significant influence on mortality, with more dead eggs and larvae in the deeper substrate layers, most likely attributed to an increase of fine sediment and a decrease of oxygen availability over time. Particularly the HDS revealed high mortality rates of larvae since it had a 17% lower mean oxygen level compared to the other spawning grounds. These findings suggest that if additional measures such as substratum restoration were undertaken to increase oxygen availability within HDS, these groundwater-dominated ditches could be incorporated as part of an efficient river restoration strategy.

Cyanobacteria are favored by climate change and global warming; however, to date, most research and monitoring programs have focused on planktic cyanobacteria. Benthic cyanobacteria blooms also increase and pose a risk to animal and human health; however, there is limited knowledge of their occurrence, distribution and the toxins involved, especially in relation to their planktic conspecifics. Therefore, we analyzed the benthic and planktic life forms of cyanobacterial communities in 34 lakes in Germany, including a monitoring of cyanotoxins. Community analyses were based on microscopic examination and Illumina sequencing of the 16S rRNA gene. The analyses of cyanotoxins were carried out using LC-MS/MS and ELISA. Observed benthic mats containing cyanobacteria consisted mainly of Nostocales and Oscillatoriales, being present in 35% of the lakes. Anatoxin was the most abundant cyanotoxin in the benthic samples, reaching maximum concentrations of 45,000 µg/L, whereas microcystin was the predominate cyanotoxin in the open-water samples, reaching concentrations of up to 18,000 µg/L. Based on the results, specific lakes at risk of toxic cyanobacteria could be identified. Our findings suggest that monitoring of benthic cyanobacteria and their toxins should receive greater attention, ideally complementing existing open-water sampling programs with little additional effort.

Functional and oxygenated stream beds provide crucial habitat for multiple endangered stream taxa, including endangered freshwater mussels, fishes, and insect larvae. Stream bed restoration measures such as substrate raking are often applied to mitigate excess fine sediment introductions and stream bed colmation, yet such measures are controversial. In this study, we conducted a systematic experiment in which sites with stream bed raking and removal of macrophytes were monitored over two years and compared with before-treatment conditions and untreated reference sites in the Swedish Brånsån stream, which still contains a population of the endangered freshwater pearl mussel Margaritifera margaritifera. The stream bed restoration resulted in improved habitat quality, as evident from decreased substrate compaction, increased redox potential, and oxygen supply into the stream bed. In contrast to previous studies in Central European catchments with more intensive agricultural catchment uses, the effects of the restoration measure were much longer, extending over two years. Consequently, stream bed raking and macrophyte removal can be considered a useful and more long-lasting restoration measure than currently assumed, especially in streams where excess input of fine sediment has already been mitigated, where catchment land use is rather extensive, and where near-natural flow regimes still prevail.

Abstract Securing genetic integrity is of key importance in conservation-oriented captive breeding programs releasing juveniles into the wild. This is particularly true for species such as the endangered freshwater pearl mussel (Margaritifera margaritifera) for which a number of captive breeding facilities has been established in Europe. The core objective of this study was to compare the genetic constitution of 29 cohorts of captive-bred freshwater pearl mussels from five different breeding facilities in Austria, France, Luxembourg and Germany, with their original 14 source populations from nine major European drainages, based on microsatellite markers. Captive-bred mussels represented 11 different genetic clusters, suggesting an important contribution of the breeding stations to securing the genetic diversity of the species. In almost all cases, the cultured offspring closely resembled the genetic constitution of the source mussels as revealed from the STRUCTURE analysis and the generally high assignment of offspring to the original source populations. The majority of captive-bred cohorts had an increased inbreeding coefficient and decreased genetic variability compared to their source populations as measured by AR and HO. Highest numbers of deformed juveniles coincided with very low levels of HO

Hydropower use of rivers can exert multiple effects on aquatic species and habitats. Due to limitations of conservation projects in the main channels of hydropower-affected rivers, there has been an increasing focus on tributaries, side channels, and fish passes as target areas for conservation and restoration. However, some of these side channels require frequent dewatering for their maintenance, and the ecological effects of such measures remain largely unknown. In this study, we used two dewatering events in a side channel of the River Inn as an opportunity to assess the effects of these common measures on fish. All stranded fish were collected after the two dewatering events in remaining puddles of formerly restored bank habitats, determined to species level, and measured. The fish community was compared by electrofishing before and seven weeks after the dewatering in a subset of the same habitats. The dewatering created one to three remaining puddles in the bank habitats, covering 3% of the assessed bank habitat area. In these remaining puddles, 184 stranded fish from 12 species were found, including species strictly protected under national and international law. In relation to their relative abundance, smaller and less mobile species such as Cottus gobio were mostly affected by stranding in contrast to larger and open-water-oriented species such as Chondrostoma nasus. The dewatering also caused drying out of important nursery zones, resulting in a distinctly lower recruitment success of endangered riverine fish species in the summer following the dewatering. The evidence about the negative ecological effects documented herein should be transferred into policy measures to reduce the impairment of dewatering to a minimum and to contribute to the fulfilment to national and international legal requirements. This can be achieved by reducing the extent and frequency of periodical dewatering to a minimum, by slowing down the dewatering speed, by selecting the least critical time of the year, as well as by compensation measures.

Invasive “game-changer” species cause severe ecological impacts such as “phase shifts” in recipient ecosystems all over the world. Since the early 1990s, the ongoing global spread of the small but highly invasive Ponto-Caspian round goby Neogobius melanostomus into diverse freshwater and marine ecosystems has been observed. We postulate that this species is an ideal model to better understand and mitigate aquatic invasions. Its wide invaded range, as well as its diverse impacts on native species, have triggered a large body of research worldwide concerning its spread, ecology, and traits facilitating invasion. Several hypotheses related to invasiveness have been tested for the round goby, which are also applicable to other invasive species and for understanding general principles in invasion biology. However, a common theory explaining invasion success, especially in round goby, is still lacking. Many case studies do not consider time since invasion and use different sampling protocols and methodologies, hampering the comparability of results and conclusions. We thus propose strengthening the network of goby researchers and establishing long-term databases based on continuous and harmonized monitoring covering all stages of the invasion process as crucial requirements to better understand and manage aquatic invasions. In many cases, such monitoring can easily be integrated into existing survey schemes.

An increase in river water temperatures is being detected worldwide, with some predictions of an up to 4°C rise by 2050. Such stream temperature increase is likely to affect aquatic communities, with predicted declines and range shifts of cold stenothermic species and a facilitated dispersal and population development in temperature-tolerant species, including invasive ones. This study analyzed how thermal changes affect macroinvertebrate community compositions in three differentiated thermal regions within a single stream system. In each thermal region, we used standard surber sampling in combination with in-stream cross-exposure experiments, comparing the thermal response of native vs. non-native gammarids (Gammarus roeselii and Dikerogammarus villosus). Macroinvertebrate species composition was highly dependent on temperature, with indigenous gammarids preferring colder sites and invasive ones such as D. villosus being dominant at higher temperatures. Species composition was also strongly affected by season, substratum and the presence of macrophytes. In light of climate change, consideration of shifts in community composition highly driven by temperature needs to become integrated with biological response patterns related to morphological and flow degradation, chemical pollution and fine sediment. Such an approach is crucial for the effective conservation and restoration of native biodiversity and for a realistic prediction of the ability to reach policy targets for aquatic ecosystems.

Conventional flood control has emphasized structural measures such as levees, reservoirs, and engineered channels—measures that typically simplify river channels and cut them off from their floodplain, both with adverse environmental consequences. Structural measures tend to be rigid and not easily adapted to increased flooding regimes resulting from environmental change. Such actions also limit the natural hydrologic benefits of floodplains such as storing floodwaters, improving water quality, providing habitat for invertebrates and fish during periods of inundation, and supporting a multitude of cultural services. As these benefits are more widely recognized, policies are being adopted to encourage projects that reduce flood risks and restore floodplain ecosystems, while acknowledging the social-ecological context. The number of such projects, however, remains small. We assessed four multi-benefit floodplain projects (two in California, United States, and two in Germany) and characterized their drivers, history, and measures implemented. In both United States cases, the dominant driver behind the project was flood risk reduction, and ecosystem restoration followed, in one case inadvertently, in the other as a requirement to receive a subsidy for a flood risk reduction project. One German case was motivated by ecosystem restoration, but it was more widely accepted because it also offered flood management benefits. The fourth case was conceived in terms of balanced goals of flood risk reduction, ecosystem restoration, and recreation. We conclude that projects that both reduce flood risk and restore ecosystems are clearly possible and often cost-effective, and that they could be more widely implemented. The principal barriers are often institutional and regulatory, rather than technical.

Abstract Freshwater mussels are in decline worldwide, with the depressed river mussel Pseudanodonta complanata being one of the rarest and most endangered species in Europe. Invasive mussels are suspected to be an important factor of decline, but there is little information on their interaction with native species. This study analyzed densities, depth distribution, and individual sizes and weights in one of the largest known populations of P. complanata in Europe in relation to the co‐occurring invasive zebra mussel Dreissena polymorpha and other mussel species, using a systematic transect analysis. Pseudanodonta complanata was the dominant unionid species in Lake Siecino reaching densities of up to 26 ind/m2, with half of the specimens found at a water depth of 2.0–4.0 m. Densities were highest on sandy substrates in areas of underwater currents. In contrast, 67% of native Unio tumidus were found at depths

Future water temperature changes may have a profound impact on fish-parasite interactions. However, while the effect of temperature on fish, and particularly salmonids, is well-understood, its combined effects with parasitic exposure are not. Here, we use a multi-stage experimental approach to explore the impact of increased water temperatures consistent with persistent climate change-induced warming and extreme thermal fluctuations from hydropower (thermopeaking) on brown trout alevins and fry before and during exposure to Saprolegnia parasitica. Parasite exposure had the strongest and most significant effect on survival of both host life stages. The combination of parasite exposure, thermal pre-conditioning and the ongoing thermal regime had a weak but significant influence on alevin mortality. Both parasite-exposed alevin and fry experienced increased mortality when a constant increase in temperature was combined with intermittent thermal increases. The outcomes of this experimental approach provide the basis for future studies scaling up the potential impacts of temperatures and parasite exposure that key fish species may face in the wild. They also highlight the effects of anthropogenic changes on brown trout populations, as pressures on aquatic organisms are likely to intensify in future climate scenarios with increased hydropower development and thermopeaking, particularly in the presence of pathogens.

The fish community of Lake Constance, a large, deep, oligotrophic lake has undergone drastic changes in recent years, with the sudden rise to dominance of invasive three-spined stickleback (Gasterosteus aculeatus) in the pelagic zone, a rather atypical habitat for this species in Central Europe. The core objective of this study was to compare the feeding ecology of stickleback and young Eurasian perch (Perca fluviatilis) in this unique situation to identify reasons for this unexpected dominance, a possible food niche and feeding time overlap, and to discuss consequences for the reshaped pelagic fish community. The diel feeding patterns and prey compositions of pelagic sticklebacks and juvenile (0+) perch sampled in October 2018 and March 2019 were studied analyzing stomach contents. The diets of both species mostly comprised zooplankton, with copepods appearing in the greatest numbers. Benthic and airborne insects were consumed occasionally, mostly by sticklebacks. Both species exhibited peaks of feeding activity early in the morning, afternoon and dusk, and in both species, stomachs were fullest at dusk. Stickleback stomachs contained about 20% more prey at night than perch, and mean estimated nocturnal stomach fullness values were almost 50% greater. Night feeding in sticklebacks was confirmed by digestive states, pointing to a possible competitive advantage over perch. Dietary composition varied over a 24-h cycle and the pattern of consumption of different prey varied between the species. Perch consumed more comparatively small cladocerans (Bosmina spp.), while larger Daphnia appeared more often in stickleback stomachs. In both species, seasonal variation in diet mirrored food availability, indicating some degree of opportunism. A Morisita-Horn index value of 0.95 confirmed dietary niche overlap between species, suggesting the large population of sticklebacks may exert a competitive effect on juvenile perch when resources are limited. Both the longer feeding periods and greater intake of nutritive high quality prey like daphnids can contribute to the rapid success of stickleback in dominating the pelagic zone of Lake Constance.

Predator-prey interactions play a key life history role, as animals cope with changing predation risk and opportunities to hunt prey. It has recently been shown that the hunting success of sticklebacks (Gasterosteus aculeatus) targeting fish larvae is dependent on both the size of the prey and the prior exposure of its species to stickleback predation. The purpose of the current study was to identify the behavioural predator-prey interactions explaining the success or failure of sticklebacks hunting larvae of three potential prey species [roach (Rutilus rutilus), perch (Perca fluviatilis) and whitefish (Coregonus wartmannii)] in a 3D environment. Trials were carried out for each prey species at four different size classes in a standardised laboratory setup and were recorded using a slow motion, stereo camera setup. 75 predator-prey interactions including both failed and successful hunts were subject to the analysis. 3D track analysis indicated that sticklebacks applied different strategies. Prey with less complex predator escape responses, i.e. whitefish larvae, were hunted using a direct but stealthy approach ending in a lunge, while the behaviourally more complex roach and perch larvae were hunted with a faster approach. A multivariate logistic regression identified that slow average speed and acceleration of the prey in the initial stages of the hunt increased the probability of stickleback success. Furthermore, predators adjusted their swimming direction more often when hunting larger whitefish compared to smaller whitefish. The results suggest that appropriate and adequately timed avoidance behaviours, which vary between prey species and ontogenetic stages, significantly increase the chances of outmanoeuvring and escaping stickleback predation. Small whitefish larvae can reach similar levels of swimming performance compared to older conspecifics, but display ineffective anti-predator behaviours, resulting in higher hunting success for sticklebacks. Thus, the development of appropriate anti-predator behaviours depending on size appears to be the crucial factor to escaping predation.

Incidents with toxic benthic cyanobacteria blooms have been increasing recently. In 2019, several dogs were poisoned in the river Lech (Germany) by the benthic anatoxin-a-producing genus Tychonema. To characterize spatial and temporal distribution of potentially toxic Tychonema in this river, a systematic monitoring was carried out in 2020, focusing on the occurrence of the genus, its toxin production and habitat requirements. Tychonema and cyanobacterial community composition in benthic mats and pelagic samples were identified using a combined approach of microscopy and DNA sequencing of the 16S rRNA gene. In addition, anatoxin-a concentrations of selected samples were measured using the ELISA method. The habitat was characterized to assess the ecological requirements and growth conditions of Tychonema. Tychonema mats and anatoxin-a were detected at several sampling sites throughout the entire study period. Toxin concentrations increased with the progression of the vegetation period and with flow direction, reaching values between 0 and 220.5 µg/L. Community composition differed among pelagic and benthic samples, with life zone and substrate condition being the most important factors. The results of this study highlight the importance of monitoring and understanding the factors determining occurrence and toxin production of both pelagic and benthic cyanobacteria due to their relevance for the health of humans and aquatic ecosystems.

Mountain lakes are unique and often isolated freshwater habitats that harbour a rich biotic diversity. This high conservation value may be reflected by diatoms, a group of algae that is known for its reliability as a bioindicator, but which has not been studied extensively in mountain lakes of the northern European Alps. In this study, the conservation value of these lakes was assessed by characterizing the number, share, and abundance of diatom Red List (RL) taxa and their relationship with environmental variables, diatom α and β diversity (assemblage uniqueness). For this purpose, linear regression models, generalized linear models, and generalized additive models were fitted and spatial descriptors were included when relevant. Of the 560 diatom taxa identified, 64% were on the RL and half of these were assigned a threat status. As hypothesized, a decreasing share of RL species in sediment and littoral samples at higher trophic levels was reflected by higher total phosphorous content and lower Secchi depth, respectively. Species-rich lakes contained a high number of RL taxa, contrasting our hypothesis of a logarithmic relationship. In turn, RL abundance increased with uniqueness, confirming our initial hypothesis. However, some of the most unique sites were degraded by fish stocking and contained low abundances of RL species. The results demonstrate the importance of oligotrophic mountain lakes as habitats for rare freshwater biota and their vulnerability in light of human impact through cattle herding, tourism, damming, and fish stocking. Additional conservation efforts are urgently needed for mountain lakes that are still underrepresented within legal conservation frameworks. Species richness and uniqueness reflect complementary aspects of RL status and thus should be applied jointly. Uniqueness can indicate both pristine and degraded habitats, so that including information on human impacts facilitates its interpretation.

Mussels have been used as animal models for studying ecotoxicology, biomineralization, and bio-adhesion for many years. Despite a wealth of studies on their shell matrix and byssus proteins, few studies have focused on the extracellular matrix molecules in mussel soft tissues. Extracellular matrix molecules may play important roles in biomineralization, immune reaction, and tissue homeostasis. In the present study, extracellular matrix and mineralization-related molecules in zebra mussel soft tissue were immunolocalized using well-characterized monoclonal antibodies. Our results demonstrate specific immunolocalization for collagen IV, fibronectin, and keratan sulfate in hemocytes; collagen IV in peripheral nerves; and aggrecan, link protein, and collagen XVIII in foot tissue. Laminin, decorin, and osteonectin were also broadly immunolocalized in mussel soft tissues. The distributions of these extracellular matrix molecules in mussel tissues are in line with the cell-mediated shell mineralization hypothesis, providing evidence for the molecules involved in the peripheral nervous system and byssus formation, and explaining the conservation of extracellular matrix molecules during evolution. These results further contribute to establishing zebra mussels as an attractive animal model in biomedical research.

Knowledge on the extent and mechanisms of fish damage caused by hydropower facilities is important for the conservation of fish populations. Herein, we assessed the effects of hydropower turbine passage on internal fish injuries using X-ray technology. A total of 902 specimens from seven native European fish species were screened for 36 types of internal injuries and 86 external injuries evaluated with a previously published protocol. The applied systematic visual evaluation of X-ray images successfully detected skeletal injuries, swim bladder anomalies, emphysema, free intraperitoneal gas and hemorrhages. Injuries related to handling and to impacts of different parts of the hydropower structure could be clearly distinguished applying multivariate statistics and the data often explained delayed mortality within 96 h after turbine passage. The internal injuries could clearly be assigned to specific physical impacts resulting from turbine passage such as swim bladder rupture due to abrupt pressure change or fractures of skeletal parts due to blade-strike, fluid shear or severe turbulence. Generally, internal injuries were rarely depicted by external evaluation. For example, 29% of individuals with vertebral fractures did not present externally visible signs of severe injury. A combination of the external and internal injury evaluation allows quantifying and comparing fish injuries across sites, and can help to identify the technologies and operational procedures which minimize harm to fish in the context of assessing hydropower-related fish injuries as well as in assessing fish welfare.

The forecast of warmer weather, and reduced precipitation and streamflow under climate change makes freshwater biota particularly vulnerable to being exposed to temperature extremes. Given the importance of temperature to regulate vital physiological processes, the availability of discrete cold-water patches (CWPs) in rivers to act as potential thermal refugia is critical to support freshwater ecosystem function. Being able to predict their spatial distribution at riverscape scales is the first step to understanding the capacity to maintain thermal refuges and to inform future river management strategies. Novel Unmanned Aerial Vehicle (UAV)-based Thermal Infra-Red (TIR) imagery technologies provide an opportunity to assess riverscape stream temperature. On the example of a 50 km linear length of the groundwater-dominated Upper Ovens River (Australia), this study presents a methodology addressing critical challenges in UAV-based TIR and optical data acquisition, processing, and interpretation. Our methodological approach generated 49 georeferenced high-resolution TIR and optical orthomosaicked imagery sets. The imagery sets allowed us to identify river-length longitudinal patterns of temperature and to detect, characterize, and classify 260 CWPs. Both stream and CWPs temperatures increased but presented considerable variability with downstream distance. CWPs were non-uniformly distributed along the riverscape, with emergent hyporheic water types dominating, followed by deep pools, shading, side channels, and tributaries. We found associations between CWPs and key physical controls including land use, riparian vegetation, longitudinal and lateral CWP location, and CWP area size, illustrating processes acting at multiple spatial scales. This study provides a basis for future works on the thermal associations with physical controls over a riverscape, and it highlights the major challenges and limitations of the use of UAV-based TIR and optical imagery to be used in future applications. In conjunction with studies of thermally linked ecological processes, the predictions of CWPs can help prioritize river restoration measures as effective climate adaptation tools.

Autochthonous calcite precipitation is an important process for C-fixation in hard-water lakes, which is mainly induced by the photosynthesis of planktonic microorganisms. Among these, the widespread calcifying green alga Phacotus lenticularis (Ehrenberg) Diesing contributes to biogenic calcite precipitation in temperate regions. Its role in carbonate precipitation needs to be investigated, because there are no studies dedicated to the quantitative contribution of Phacotus shells to long term carbonate sequestration in hard-water lake sediments. In order to fill this gap, the Phacotus shell content in the sediments of four German hard-water lakes was determined and compared to the fraction of Phacotus shells in the total suspended autochthonous calcite of the euphotic zone. It was found that the Phacotus shells contributed at least 10% to the autochthonous carbonate precipitation in the upper water column in three investigated lakes. During a Phacotus mass occurrence with a cell density of 1.8 × 106 Ind L-1 in Lake Hopfensee, even 59% of the 3.6 mg L-1 total carbonate concentration consisted of Phacotus shells. In contrast to this high amount, the topmost basinal sediment contained a Phacotus shell content between 80 and 36,252 individuals per mg dry sediment, representing only 0.02% to 2.28% of the total carbonate sediment content. In a gravity core from Lake Grosser Ostersee, dating back ~150 years, the Phacotus shell content was continuously below 0.24% whereas the shell diameters remained equal to those of living individuals found in the water column proving that Phacotus shells are capable to persist in the sediment after deposition. A main reason for the large discrepancy between Phacotus shell abundance in the euphotic zone and in sediment was found to be the gross authigenic carbonate precipitation, which dilutes the sedimenting Phacotus shells that accumulate exclusively during short and intensive population peaks in summer. Additionally, dissolution of the carbonate shells during sedimentation was proven to be a relevant factor in Lake Igelsbachsee by means of reducing the number of Phacotus shells reaching the lake bottom. These facts explain that short-term high Phacotus carbonate contents of the total suspended carbonate in the water column do not mirror the contribution of Phacotus shells in the sedimentary record.

The biogenic carbonate precipitation by the freshwater alga Phacotus lenticularis may play a role in long-term carbon (C) fixation that has not yet been quantified. This is partly due to the absence of a standardised methodology to representatively sample and assess the cell density and sedimentation of P. lenticularis in lakes. The objective of the present study was to define an adequate sampling methodology taking into account the spatiotemporal variation of P. lenticularis as well as the sedimentation and dissolution of calcite shells. Simultaneous measurements in three different lake sub-basins of Lake Grosser Ostersee, Germany, showed that the spatial cell density of P. lenticularis was similar in each sub-basin. At all sites, the vertical P. lenticularis cell density maxima corresponded with the slowly downshifting thermocline from depths of 2 to 6 m. During the entire growth period, composite samples from 0 to 7 m included 89% of the total P. lenticularis population. Lake bathymetry, as well as external factors like wind exposure, did not appear to affect the abundance of these calcifying algae. Sediment traps at a depth below the thermocline (at 7 m) and 1 m above the lake bottom recorded sedimentation rates of P. lenticularis shell halves (sh) between 1.1×106 and 1.1×108 sh m−2 d−1, while mean cell concentrations in the water column were between 1.1×108 and 1.7×109 shells per m². Sinking velocity ranged between 3 and 4 m d−1. Sediment from traps installed at a depth of 7 m did not reflect mean shell concentrations in the water column above. Dissolution of carbonates reduced the number of shells in sediment traps at the lake bottom and during the storage of samples. A laboratory experiment showed that even distilled water used for dilution during microscopic analysis led to dissolution of P. lenticularis shells. In conclusion, combined sampling of P. lenticularis from open water and sediment traps close to the lake bottom delivers a most representative assessment of biogenic carbonate precipitation. Due to dissolution effects, high temporal resolution along with appropriate sample preservation are crucial, whereas spatial representativeness was already achieved with low number of sampling sites per lake.

Aquatic reed beds provide important ecological functions, yet their monitoring by remote sensing methods remains challenging. In this study, we propose an approach of assessing aquatic reed stand status indicators based on data from the airborne photogrammetric 3K-system of the German Aerospace Center (DLR). By a Structure from Motion (SfM) approach, we computed stand surface models of aquatic reeds for each of the 14 areas of interest (AOI) investigated at Lake Chiemsee in Bavaria, Germany. Based on reed heights, we subsequently calculated the reed area, surface structure homogeneity and shape of the frontline. For verification, we compared 3K aquatic reed heights against reed stem metrics obtained from ground-based infield data collected at each AOI. The root mean square error (RMSE) for 1358 reference points from the 3K digital surface model and the field-measured data ranged between 39 cm and 104 cm depending on the AOI. Considering strong object movements due to wind and waves, superimposed by water surface effects such as sun glint altering 3K data, the results of the aquatic reed surface reconstruction were promising. Combining the parameter height, area, density and frontline shape, we finally calculated an indicator for status determination: the aquatic reed status index (aRSI), which is based on metrics, and thus is repeatable and transferable in space and time. The findings of our study illustrate that, even under the adverse conditions given by the environment of the aquatic reed, aerial photogrammetry can deliver appropriate results for deriving objective and reconstructable parameters for aquatic reed status (Phragmites australis) assessment.

Abstract Propagating and releasing freshwater mussels (Unionida) into the wild can contribute substantially to conservation and perhaps ecosystem restoration, but poorly conceived projects can waste money and public good will, and harm mussel populations and ecosystems. Moving from vague, emotional reactions about mussel restoration to more rigorous discussions and analyses can help focus efforts to where they do the most good. We suggest that: (i) projects to restore mussels for conservation goals to sites where known environmental problems have been eliminated or mitigated have good prospects for success; (ii) projects to restore mussels for conservation goals to sites where known environmental problems have not been eliminated or mitigated have poor prospects for success; (iii) projects to restore mussels for conservation goals to sites in the common situation in which the status of environmental problems is unknown have unknown prospects for success, but may be valuable as scientific experiments, if project performance is monitored properly; (iv) the value of population augmentation as a conservation tool is uncertain, and needs better theoretical and empirical analysis; (v) assisted migration of mussels as a conservation tool is controversial, and should be discussed thoroughly before we reach crises in which it is rejected or carried out carelessly; (vi) projects to restore ecosystem services face more stringent criteria for success than conservation projects, and some such projects being discussed seem unlikely to succeed. Monitoring data on how restoration projects perform typically are inadequately collected, reported, disseminated, and used to improve practice. This could be improved by setting up a clearinghouse to collect, hold, and disseminate data; providing training to restorationists; and opening conversations between restorationists and data managers and statisticians.

Submerged aquatic vegetation (SAV) plays an important role in freshwater lake ecosystems. Due to its sensitivity to environmental changes, several SAV species serve as bioindicators for the trophic state of freshwater lakes. Variations in water temperature, light availability and nutrient concentration affect SAV growth and species composition. To monitor the trophic state as required by the European Water Framework Directive (WFD), SAV needs to be monitored regularly. This study analyses the development of macrophyte patches at Lake Starnberg, Germany, by exploring four Sentinel-2A acquired within the main growing season in August and September 2015. Two different methods of littoral bottom coverage assessment are compared, i.e. a semi-empirical method using depth-invariant indices and a physically based, bio-optical method using WASI-2D (Water Colour Simulator). For a precise Sentinel-2 imaging by date and hour, satellite measurements were supported by lake bottom spectra delivered by in situ data based reflectance models. Both methods identified vegetated and non-vegetated patches in shallow water areas. Furthermore, tall- and meadow-growing SAV growth classes could be differentiated. Both methods revealed similar results when focusing on the identification of sediment and SAV patches (R² from 0.56 to 0.81), but not for a differentiation on SAV class growth level (R²

Understanding stream thermal heterogeneity patterns is crucial to assess and manage river resilience in light of climate change. The dual acquisition of high-resolution thermal infrared (TIR) and red–green–blue-band (RGB) imagery from unmanned aerial vehicles (UAVs) allows for the identification and characterization of thermally differentiated patches (e.g., cold-water patches—CWPs). However, a lack of harmonized CWP classification metrics (patch size and temperature thresholds) makes comparisons across studies almost impossible. Based on an existing dual UAV imagery dataset (River Ovens, Australia), we present a semi-automatic supervised approach to classify key riverscape habitats and associated thermal properties at a pixel-scale accuracy, based on spectral properties. We selected five morphologically representative reaches to (i) illustrate and test our combined classification and thermal heterogeneity assessment method, (ii) assess the changes in CWP numbers and distribution with different metric definitions, and (iii) model how climatic predictions will affect thermal habitat suitability and connectivity of a cold-adapted fish species. Our method was successfully tested, showing mean thermal differences between shaded and sun-exposed fluvial mesohabitats of up to 0.62 °C. CWP metric definitions substantially changed the number and distance between identified CWPs, and they were strongly dependent on reach morphology. Warmer scenarios illustrated a decrease in suitable fish habitats, but reach-scale morphological complexity helped sustain such habitats. Overall, this study demonstrates the importance of method and metric definitions to enable spatio-temporal comparisons between stream thermal heterogeneity studies.

The success rate of extracorporeal shock wave therapy (ESWT) for fracture nonunions in human medicine (i.e. radiographic union at 6 months after ESWT) is only approximately 75%. Detailed knowledge regarding the underlying mechanisms that induce bio-calcification after ESWT is limited. We analyzed the biological response within mineralized tissue of a new invertebrate model organism, the zebra mussel Dreissena polymorpha, after exposure with extracorporeal shock waves (ESWs). Mussels were exposed to ESWs with positive energy density of 0.4 mJ/mm2 (A) or were sham exposed (B). Detection of newly calcified tissue was performed by exposing the mussels to fluorescent markers. Two weeks later, the A-mussels showed a higher mean fluorescence signal intensity within the shell zone than the B-mussels (P

Few studies have systematically investigated mid- or long-term temporal changes of biological characteristics in invasive alien species considering the different phases of an invasion. We studied the invasion performance of one of the most invasive species worldwide, the round goby Neogobius melanostomus, from total absence over first occurrence until establishment from 2010 to 2015 in the upper Danube River. After an upstream movement of the invasion front of about 30 river km within four years, the pattern that round goby pioneering populations significantly differ from longer established ones has been confirmed: Pioneering populations at the invasion front comprised more females than males, and adult specimens with a larger body size compared to those at longer inhabited areas. On the population-level, the proportion of juveniles increased with time since invasion. The results of this study provide support for the previously postulated ´bigger is better´ and ´individual trait utility´ hypotheses explaining invasion success in round goby. Pioneering invaders with their greater exploratory behavior, highly adaptive phenotypic plasticity and increased competitive ability seem to act as prime emperors of new habitats, strongly following and benefiting from man-made river-bank structures.

The proliferative darkening syndrome (PDS) is an annually recurring disease that causes species-specific die-off of brown trout (Salmo trutta fario) with a mortality rate of near 100% in pre-alpine rivers of central Europe. So far the etiology and causation of this disease is still unclear. The objective of this study was to identify the cause of PDS using a next-generation technology detection pipeline. Following the hypothesis that PDS is caused by an infectious agent, brown trout specimens were exposed to water from a heavily affected pre-alpine river with annual occurrence of the disease. Specimens were sampled over the entire time period from potential infection through death. Transcriptomic analysis (microarray) and RT-qPCR of brown trout liver tissue evidenced strong gene expression response of immune-associated genes. Messenger RNA of specimens with synchronous immune expression profiles were ultra-deep sequenced using next-generation sequencing technology (NGS). Bioinformatic processing of generated reads and gap-filling Sanger re-sequencing of the identified pathogen genome revealed strong evidence that a piscine-related reovirus is the causative organism of PDS. The identified pathogen is phylogenetically closely related to the family of piscine reoviruses (PRV) which are considered as the causation of different fish diseases in Atlantic and Pacific salmonid species such as Salmo salar and Onchorhynchus kisutch. This study also highlights that the approach of first screening immune responses along a timeline in order to identify synchronously affected stages in different specimens which subsequently were ultra-deep sequenced is an effective approach in pathogen detection. In particular, the identification of specimens with synchronous molecular immune response patterns combined with NGS sequencing and gap-filling re-sequencing resulted in the successful pathogen detection of PDS.

The importance of carbonate precipitation by phytoplankton in fresh water lakes has not been sufficiently considered in global carbon cycles and climate change scenarios. The objective of this study was to determine the influence of the calcifying bivalved phytoflagellate Phacotus lenticularis (Ehrenberg) Deising 1866 on the total calcite precipitation in five European hard-water lakes. For this purpose, an accurate mass determination of single Phacotus lenticularis shells was required. We developed a novel methodological approach to precisely determine the volume and mass of the calcified shells. Focused ion beam (FIB) techniques were employed to investigate internal structural features. Thin layer cross-sections of the shell profiles were reproduced and perforation as well as the crystalline structure of the calcite plates were monitored. 3D-shell models were computed by 360° rotation of the shell cross-sections using a CAD 3D imaging software to calculate precise volumes and estimate realistic masses. In contrast to previous estimates, we determined a 2.8-fold higher shell mass of 0.86 ng CaCO3 (standard deviation SD = 0.18) for the highly massive shells at a mean volume per individual of 334.1 µm³ (SD = 70). An initial shell porosity of less than 5% was derived from thin layer cross-section images, resulting in a presumed mean shell density of 0.0026 ng µm−3. The shell diameter was significantly influenced by the lake’s origin. The shells from each lake displayed substantial variations in diameter and shape. The pores in the shells showed two variations. Wider pore canals penetrated the whole shell wall, whereas small, elongated pores were located along the interspaces between calcite crystals with tabular habit. The approximate average dimensions of these calcite plates were 1.0 × 1.6 × 0.2 µm. The mean lateral wall thickness at the rim and centre of the shell were 1.98 µm (SD = 0.42) and 0.79 µm (SD = 0.17), respectively. The average carbonate precipitation by Phacotus lenticularis in relation to the total epilimnetic suspended calcite precipitation was 6.0% in the oligotrophic lake Großer Ostersee (Bavaria, Germany). During the growing season, Phacotus lenticularis contributed up to 21% of the particulate calcium carbonate in the epilimnion. These findings suggest that Phacotus lenticularis should be considered in the assessment of hard-water lake carbon cycling.

Bacterioplankton plays an essential role in aquatic ecosystems, and cyanobacteria are an influential part of the microbiome in many water bodies. In freshwaters used for recreational activities or drinking water, toxic cyanobacteria cause concerns due to the risk of intoxication with cyanotoxins, such as microcystins. In this study, we aimed to unmask relationships between toxicity, cyanobacterial community composition, and environmental factors. At the same time, we assessed the correlation of a genetic marker with microcystin concentration and aimed to identify the main microcystin producer. We used Illumina MiSeq sequencing to study the bacterioplankton in two recreational lakes in South Germany. We quantified a microcystin biosynthesis gene (mcyB) using qPCR and linked this information with microcystin concentration to assess toxicity. Microcystin biosynthesis gene (mcyE)-clone libraries were used to determine the origin of microcystin biosynthesis genes. Bloom toxicity did not alter the bacterial community composition, which was highly dynamic at the lowest taxonomic level for some phyla such as Cyanobacteria. At the OTU level, we found distinctly different degrees of temporal variation between major bacteria phyla. Cyanobacteria and Bacteroidetes showed drastic temporal changes in their community compositions, while the composition of Actinobacteria remained rather stable in both lakes. The bacterial community composition of Alpha- and Beta-proteobacteria remained stable over time in Lake Klostersee, but it showed temporal variations in Lake Bergknappweiher. The presence of potential microcystin degraders and potential algicidal bacteria amongst prevalent Bacteroidetes and Alphaproteobacteria implied a role of those co-occurring heterotrophic bacteria in cyanobacterial bloom dynamics. Comparison of both lakes studied revealed a large shared microbiome, which was shaped toward the lake specific community composition by environmental factors. Microcystin variants detected were microcystin-LR, -RR, and -YR. The maximum microcystin concentrations measured was 6.7 μg/L, a value still acceptable for recreational waters but not drinking water. Microcystin concentration correlated positively with total phosphorus and mcyB copy number. We identified low abundant Microcystis sp. as the only microcystin producer in both lakes. Therefore, risk assessment efforts need to take into account the fact that non-dominant species may cause toxicity of the blooms observed.

The mechanistic target of rapamycin (mTOR) and ryanodine receptor (RyR) signaling pathways regulate fundamental processes of neurodevelopment, and genetic mutations within these pathways have been linked to neurodevelopmental disorders. While previous studies have established that these signaling molecules are expressed in developing zebrafish, a detailed characterization of the ontogenetic profile of these signaling molecules is lacking. Thus, we evaluated the spatiotemporal expression of key transcripts in mTOR and RyR signaling pathways in wildtype zebrafish at 24, 72 and 120 hours post fertilization (hpf). We further determined whether transcriptional profiles of a subset of genes in both pathways were altered by exposure to PCB 95 (2,2′,3,5′,6-pentachlorobiphenyl), a pervasive environmental contaminant known to cause developmental neurotoxicity in mammalian systems via RyR-dependent mechanisms. Quantitative PCR revealed that transcription generally increased across development. Genes in the signaling pathway upstream of the mTORC1 complex, and the RyR-paralogs, ryr2a and ryr3, were robustly upregulated, and in situ hybridization of ryr3 coincided with a transcriptional shift from muscle to neuronal tissue after 24 hpf. Static waterborne exposure to PCB 95 beginning at 6 hpf significantly altered transcription of genes in both pathways. These changes were concentration- and time-dependent, and included downregulation of rptor, a member of the mTORC1 complex, at both 72 and 120 hpf, and increased transcript levels of the RyR paralog ryr2b and downstream target of RyR signaling, Wingless-type 2ba (wnt2ba) at 72 hpf. The detailed transcriptomic profiling of key genes within these two signaling pathways provides a baseline for identifying other environmental factors that modify normal spatiotemporal expression patterns of mTOR and RyR signaling pathways in the developing zebrafish, as illustrated here for PCB 95.

The use of environmental DNA (eDNA) to determine the presence and distribution of aquatic organisms has become an important tool to monitor and investigate freshwater communities. The successful application of this method in the field, however, is dependent on the effectiveness of positive DNA verification, which is influenced by site-specific environmental parameters. Factors affecting eDNA concentrations in aquatic ecosystems include flow conditions, and the presence of substances that possess DNA-binding properties or inhibitory effects. In this study we investigated the influence of different environmental parameters on the detection success of eDNA using the invasive goby Neogobius melanostomus. In a standardized laboratory setup, different conditions of flow, sediment-properties, and fish density were compared, as well as different potential natural inhibitors such as algae, humic substances, and suspended sediment particles. The presence of sediment was mainly responsible for lower eDNA detection in the water samples, regardless of flow-through or standing water conditions and a delayed release of eDNA was detected in the presence of sediment. Humic substances had the highest inhibitory effect on eDNA detection followed by algae and siliceous sediment particles. The results of our study highlight that a successful application of eDNA methods in field surveys strongly depends on site-specific conditions, such as water flow conditions, sediment composition, and suspended particles. All these factors should be carefully considered when sampling, analyzing, and interpreting eDNA detection results.

Abstract The theoretical concept of the ecosystem approach (EA) aims at assessing ecosystem function based on integrative assessments of multiple levels of biological organization. Since the United Nations Convention on Biological Diversity in 1992, the EA has been increasingly integrated into environmental policy and legislation, but to date, its practical implementation remains vague with a lack of universal guidelines and concrete recommendations for its use across ecosystem boundaries. On the basis of a review of scientific literature, worldwide environmental legislation and existing monitoring approaches, we identified the most important factors which hamper the feasibility of the EA. We propose a generally applicable methodology for implementing the EA in ecological and environmental monitoring across different ecosystems and habitat types. Successful application of the EA largely depends on adequately standardized and synchronized sampling designs for all abiotic and biotic components, appropriate depth of taxonomic identification, and sufficient spatial and temporal replication. The proposed step‐by‐step guidelines for using the EA are valid across ecosystem types, geographic regions, and for a variety of data types, making them promising tools for ecological monitoring.

Ecotoxicology faces the challenge of assessing and predicting the effects of an increasing number of chemical stressors on aquatic species and ecosystems. Herein we review currently applied tools in ecological risk assessment, combining information on exposure with expected biological effects or environmental water quality standards; currently applied effect-based tools are presented based on whether exposure occurs in a controlled laboratory environment or in the field. With increasing ecological relevance the reproducibility, specificity and thus suitability for standardisation of methods tends to diminish. We discuss the use of biomarkers in ecotoxicology including ecotoxicogenomics-based endpoints, which are becoming increasingly important for the detection of sublethal effects. Carefully selected sets of biomarkers allow an assessment of exposure to and effects of toxic chemicals, as well as the health status of organisms and, when combined with chemical analysis, identification of toxicant(s). The promising concept of “adverse outcome pathways (AOP)” links mechanistic responses on the cellular level with whole organism, population, community and potentially ecosystem effects and services. For most toxic mechanisms, however, practical application of AOPs will require more information and the identification of key links between responses, as well as key indicators, at different levels of biological organization, ecosystem functioning and ecosystem services.

Quantification of reed coverage and vegetation status is fundamental for monitoring and developing lake conservation strategies. The applicability of Unmanned Aerial Vehicles (UAV) three-dimensional data (point clouds) for status evaluation was investigated. This study focused on mapping extent, density, and vegetation status of aquatic reed beds. Point clouds were calculated with Structure from Motion (SfM) algorithms in aerial imagery recorded with Rotary Wing (RW) and Fixed Wing (FW) UAV. Extent was quantified by measuring the surface between frontline and shoreline. Density classification was based on point geometry (height and height variance) in point clouds. Spectral information per point was used for calculating a vegetation index and was used as indicator for vegetation vitality. Status was achieved by combining data on density, vitality, and frontline shape outputs. Field observations in areas of interest (AOI) and optical imagery were used for reference and validation purposes. A root mean square error (RMSE) of 1.58 m to 3.62 m for cross sections from field measurements and classification was achieved for extent map. The overall accuracy (OA) acquired for density classification was 88.6% (Kappa = 0.8). The OA for status classification of 83.3% (Kappa = 0.7) was reached by comparison with field measurements complemented by secondary Red, Green, Blue (RGB) data visual assessments. The research shows that complex transitional zones (water⁻vegetation⁻land) can be assessed and support the suitability of the applied method providing new strategies for monitoring aquatic reed bed using low-cost UAV imagery.

Aquatic reed is an important indicator for the ecological assessment of freshwater lakes. Monitoring is essential to document its expansion or deterioration and decline. The applicability of Green-LiDAR data for the status assessment of aquatic reed beds of Bavarian freshwater lakes was investigated. The study focused on mapping diagnostic structural parameters of aquatic reed beds by exploring 3D data provided by the Green-LiDAR system. Field observations were conducted over 14 different areas of interest along 152 cross-sections. The data indicated the morphologic and phenologic traits of aquatic reed, which were used for validation purposes. For the automatic classification of aquatic reed bed spatial extent, density and height, a rule-based algorithm was developed. LiDAR data allowed for the delimitating of the aquatic reed frontline, as well as shoreline, and therefore an accurate quantification of extents (Hausdorff distance = 5.74 m and RMSE of cross-sections length 0.69 m). The overall accuracy measured for aquatic reed bed density compared to the simultaneously recorded aerial imagery was 96% with a Kappa coefficient of 0.91 and 72% (Kappa = 0.5) compared to field measurements. Digital Surface Models (DSM), calculated from point clouds, similarly showed a high level of agreement in derived heights of flat surfaces (RMSE = 0.1 m) and showed an adequate agreement of aquatic reed heights with evenly distributed errors (RMSE = 0.8 m). Compared to field measurements, aerial laser scanning delivered valuable information with no disturbance of the habitat. Analysing data with our classification procedure improved the efficiency, reproducibility, and accuracy of the quantification and monitoring of aquatic reed beds.

Few studies have systematically investigated differences in performance, morphology and parasitic load of invaders at different stages of an invasion. This study analyzed phenotype-environment correlations in a fish invasion from initial absence until establishment in the headwater reach of the second largest European river, the Danube. Here, the round goby (Neogobius melanostomus) formed 73% of the fish abundance and 58% of the fish biomass in rip-rap bank habitats after establishment. The time from invasion until establishment was only about two years, indicating rapid expansion. Founder populations from the invasion front were different from longer established round goby populations in demography, morphology, feeding behaviour, sex ratio and parasitic load, indicating that plasticity in these traits determines invasion success. Competitive ability was mostly dependent on growth/size-related traits rather than on fecundity. As revealed by stable isotope analyses, specimens at the invasion front had a higher trophic position in the food web and seem to benefit from lower food competition. Somatic performance seems to be more important than investment in reproduction during the early stages of the invasion process and upstream-directed range expansion is not caused by out-migrating weak or juvenile individuals that were forced to leave high density areas due to high competition. This mechanism might be true for downstream introductions via drift. Greater abundance and densities of acanthocephalan endoparasites were observed at the invasion front, which contradicts the expectation that invasion success is determined by lower parasitic pressure in newly invaded areas. Overall, the pronounced changes in fish and invertebrate communities with a dominance of alien species suggest invasional meltdown and a shift of the upper Danube River towards a novel ecosystem with species that have greater resistance to goby predation. This seems to contribute to overcoming biological resistance and improve rapidity of dispersal.

The hyporheic zone in stream ecosystems is a heterogeneous key habitat for species across many taxa. Consequently, it attracts high attention among freshwater scientists, but generally applicable guidelines on sampling strategies are lacking. Thus, the objective of this study was to develop and validate such sampling guidelines. Applying geostatistical analysis, we quantified the spatio-temporal variability of parameters, which characterize the physico-chemical substratum conditions in the hyporheic zone. We investigated eight stream reaches in six small streams that are typical for the majority of temperate areas. Data was collected on two occasions in six stream reaches (development data), and once in two additional reaches, after one year (validation data). In this study, the term spatial variability refers to patch contrast (patch to patch variance) and patch size (spatial extent of a patch). Patch contrast of hyporheic parameters (specific conductance, pH and dissolved oxygen) increased with macrophyte cover (r(2)=0.95, p