34 results on '"Juanxu Liu"'
Search Results
2. Shikimate Kinase Plays Important Roles in Anthocyanin Synthesis in Petunia
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Junwei Yuan, Shiwei Zhong, Yu Long, Jingling Guo, Yixun Yu, and Juanxu Liu
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SK ,shikimate pathway ,anthocyanin ,metabolome ,petunia ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
In plants, the shikimate pathway is responsible for the production of aromatic amino acids L-tryptophan, L-phenylalanine, and L-tyrosine. L-Phenylalanine is the upstream substrate of flavonoid and anthocyanin synthesis. Shikimate kinase (SK) catalyzes the phosphorylation of the C3 hydroxyl group of shikimate to produce 3-phosphate shikimate (S3P), the fifth step of the shikimate pathway. However, whether SK participates in flavonoid and anthocyanin synthesis is unknown. This study characterized the single-copy PhSK gene in the petunia (Petunia hybrida) genome. PhSK was localized in chloroplasts. PhSK showed a high transcription level in corollas, especially in the coloring stage of flower buds. Suppression of PhSK changed flower color and shape, reduced the content of anthocyanins, and changed the flavonoid metabolome profile in petunia. Surprisingly, PhSK silencing caused a reduction in the shikimate, a substrate of PhSK. Further qPCR analysis showed that PhSK silencing resulted in a reduction in the mRNA level of PhDHQ/SDH, which encodes the protein catalyzing the third and fourth steps of the shikimate pathway, showing a feedback regulation mechanism of gene expression in the shikimate pathway.
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- 2022
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3. PhDHS Is Involved in Chloroplast Development in Petunia
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Juanxu Liu, Xinlei Chang, Beibei Ding, Shan Zhong, Li Peng, Qian Wei, Jie Meng, and Yixun Yu
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deoxyhypusine synthase ,chloroplast development ,sectored chlorotic leaf ,photosynthesis ,petunia ,Plant culture ,SB1-1110 - Abstract
Deoxyhypusine synthase (DHS) is encoded by a nuclear gene and is the key enzyme involved in the post-translational activation of the eukaryotic translation initiation factor eIF5A. DHS plays important roles in plant growth and development. To gain a better understanding of DHS, the petunia (Petunia hybrida) PhDHS gene was isolated, and the role of PhDHS in plant growth was analyzed. PhDHS protein was localized to the nucleus and cytoplasm. Virus-mediated PhDHS silencing caused a sectored chlorotic leaf phenotype. Chlorophyll levels and photosystem II activity were reduced, and chloroplast development was abnormal in PhDHS-silenced leaves. In addition, PhDHS silencing resulted in extended leaf longevity and thick leaves. A proteome assay revealed that 308 proteins are upregulated and 266 proteins are downregulated in PhDHS-silenced plants compared with control, among the latter, 21 proteins of photosystem I and photosystem II and 12 thylakoid (thylakoid lumen and thylakoid membrane) proteins. In addition, the mRNA level of PheIF5A-1 significantly decreased in PhDHS-silenced plants, while that of another three PheIF5As were not significantly affected in PhDHS-silenced plants. Thus, silencing of PhDHS affects photosynthesis presumably as an indirect effect due to reduced expression of PheIF5A-1 in petunia.Significance:PhDHS-silenced plants develop yellow leaves and exhibit a reduced level of photosynthetic pigment in mesophyll cells. In addition, arrested development of chloroplasts is observed in the yellow leaves.
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- 2019
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4. Molecular characterization and functional analysis of two petunia PhEILs
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Feng Liu, Li Hu, Yuanping Cai, Hong Lin, Juanxu Liu, and Yixun Yu
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Petunia ,VIGS ,ethylene signaling ,Flower senescence ,EIL ,Plant culture ,SB1-1110 - Abstract
Ethylene plays an important role in flower senescence of many plants. Arabidopsis ETHYLENE INSENSITIVE3 (EIN3) and its homolog EIL1 are the downstream component of ethylene signaling transduction. However, the function of EILs during flower senescence remains unknown. Here, a petunia EIL gene, PhEIL2, was isolated. Phylogenetic tree showed that PhEIL1, whose coding gene is previously isolated, and PhEIL2 are the homologs of Arabidopsis AtEIL3 and AtEIL1, respectively. The expression of both PhEIL1 and PhEIL2 is the highest in corollas and increased during corolla senescence. Ethylene treatment increased the mRNA level of PhEIL1 but reduced that of PhEIL2. VIGS-mediated both PhEIL1 and PhEIL2 silencing delayed flower senescence, and significantly reduced ethylene production and the expression of PhERF3 and PhCP2, two senescence-associated genes in petunia flowers. The PhEIL2 protein activating transcription domain is identified in the 353-612-amino acids at C-terminal of PhEIL2 and yeast two-hybrid and BiFC assays show that PhEIL2 interacts with PhEIL1, suggesting that PhEIL1 and PhEIL2 might form heterodimers to recognize their targets. These molecular characterizations of PhEIL1 and PhEIL2 in petunia are different with those of in Vigna radiata and Arabidopsis.
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- 2016
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5. <scp> PhAAT1 </scp> , encoding an anthocyanin acyltransferase, is transcriptionally regulated by <scp>PhAN2</scp> in petunia
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Zeyu Chen, Junwei Yuan, Yi Yao, Jiahao Cao, Wenjie Yang, Yu Long, Juanxu Liu, and Weiyuan Yang
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Physiology ,Genetics ,Cell Biology ,Plant Science ,General Medicine - Published
- 2023
6. Ph5GT silencing alters flower color and flavonoids metabolome profile in petunia
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Xin Li, Jiahao Cao, Huina Zhao, Guiyun Jiang, Juanxu Liu, and Yixun Yu
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Anthocyanins ,Petunia ,Flavonoids ,Physiology ,Genetics ,Metabolome ,Color ,Cell Biology ,Plant Science ,General Medicine ,Flowers ,Plants - Abstract
Anthocyanins are important pigments in plants and glycosylation plays an important role in the stability of anthocyanins. Anthocyanin 5-O-glucosyltransferase (5GT) can glycosylate anthocyanin at the 5-O-position. Till now, the enzymatic activity characteristics of 5GT had been studied in vitro in a variety of plants. However, the subcellular localization of 5GT protein still remained unclear, and little genetic evidence on the roles of 5GT in plants has been reported. The full-length Ph5GT gene from petunia (Petunia hybrida) was isolated in this study. Green fluorescent fusion protein assays revealed that Ph5GT protein was localized to the cytoplasm. Ph5GT was found to be highly expressed in flowers, with highest levels of expression occurring during the coloring stage of flower development. Furthermore, Ph5GT silencing led to the change in flower color from purple to light purple and a significant reduction in total anthocyanin content. The metabolome analysis revealed that the content of malvidins and petunidins modified by glycosylation at the 5-O-position was significantly reduced, while the content of their precursor without glycosylation was significantly increased, implying that Ph5GT could glycosylate malvidin and petunidin derivatives and that the substrate types of Ph5GT were expanded in comparison to previous studies.
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- 2022
7. Crotonylation versus acetylation in petunia corollas with reduced acetyl-CoA due to PaACL silencing
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Weiyuan Yang, Xin Li, Guiyun Jiang, Yu Long, Hui Li, Shujun Yu, Huina Zhao, and Juanxu Liu
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Petunia ,Proteome ,Physiology ,Acetyl Coenzyme A ,Lysine ,Genetics ,Acetylation ,Cell Biology ,Plant Science ,General Medicine ,Protein Processing, Post-Translational - Abstract
Protein acetylation and crotonylation are important posttranslational modifications of lysine. In animal cells, the correlation of acetylation and crotonylation has been well characterized and the lysines of some proteins are acetylated or crotonylated depending on the relative concentrations of acetyl-CoA and crotonyl-CoA. However, in plants, the correlation of acetylation and crotonylation and the effects of the relative intracellular concentrations of crotonyl-CoA and acetyl-CoA on protein crotonylation and acetylation are not well known. In our previous study, PaACL silencing changed the content of acetyl-CoA in petunia (Petunia hybrida) corollas, and the effect of PaACL silencing on the global acetylation proteome in petunia was analyzed. In the present study, we found that PaACL silencing did not significantly alter the content of crotonyl-CoA. We performed a global crotonylation proteome analysis of the corollas of PaACL-silenced and control petunia plants; we found that protein crotonylation was closely related to protein acetylation and that proteins with more crotonylation sites often had more acetylation sites. Crotonylated proteins and acetylated proteins were enriched in many common Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. However, PaACL silencing resulted in different KEGG pathway enrichments of proteins with different levels of crotonylation sites and acetylation sites. PaACLB1-B2 silencing did not led to changes in the opposite direction in crotonylation and acetylation levels at the same lysine site in cytoplasmic proteins, which indicated that cytoplasmic lysine acetylation and crotonylation might not depend on the relative concentrations of acetyl-CoA and crotonyl-CoA. Moreover, the global crotonylome and acetylome were weakly positively correlated in the corollas of PaACL-silenced and control plants.
- Published
- 2022
8. PhRHMs play important roles in leaf and flower development and anthocyanin synthesis in petunia
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Lina Sang, Guoju Chen, Jiahao Cao, Juanxu Liu, and Yixun Yu
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Flavonoids ,Physiology ,Nucleotides ,Green Fluorescent Proteins ,Racemases and Epimerases ,Cell Biology ,Plant Science ,General Medicine ,Flowers ,Rhamnose ,Arabinose ,Petunia ,Anthocyanins ,Plant Leaves ,Glucose ,Gene Expression Regulation, Plant ,Genetics ,Oxidoreductases - Abstract
Anthocyanins, vital metabolites in plants, are formed by anthocyanidins combined with various monosaccharides, including glucose, rhamnose, and arabinose. Rhamnose contributes greatly to the glycosylation of anthocyanidins. There are two kinds of rhamnose synthase (RS): rhamnose biosynthesis (RHM), and nucleotide-RS/epimerase-reductase (UER1). Nevertheless, no RS isoform was reported to be involved in anthocyanin synthesis. Here, three homologous PhRHM genes, namely PhRHM1, PhRHM2, and PhRHM3, and one PhUER1 gene from petunia were cloned and characterized. Green fluorescent protein fusion protein assays revealed that PhRHMs and PhUER1 are localized in the cytoplasm. We obtained PhRHM1 or/and PhRHM2 or PhUER1 silenced petunia plants and did not attempt to obtain PhRHM3 silenced plants since PhRHM3 mRNA was not detected in petunia organs examined. PhRHM1 and PhRHM2 (PhRHM1-2) silencing induced abnormal plant growth and decreased the contents of l-rhamnose, photosynthetic pigments and total anthocyanins, while PhUER1 silencing did not cause any visible phenotypic changes. Flavonoid metabolome analysis further revealed that PhRHM1-2 silencing reduced the contents of anthocyanins with rhamnose residue. These results revealed that PhRHMs contribute to the biosynthesis of rhamnose and that PhRHMs participate in the anthocyanin rhamnosylation in petunia, while PhUER1 does not.
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- 2022
9. PaACL silencing accelerates flower senescence and changes the proteome to maintain metabolic homeostasis in Petunia hybrida
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Lina Sang, Qian Wei’s, Yixun Yu, Guoju Chen, Shiwei Zhong, Xinyou Zhang, Zeyu Chen, Juanxu Liu, and Huina Zhao
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biology ,ATP citrate lyase ,acetylome ,Physiology ,AcademicSubjects/SCI01210 ,proteome ,Plant Science ,biology.organism_classification ,Petunia ,Research Papers ,Cell biology ,Petunia axillaris ,Transcriptome ,ATP-citrate lyase ,Acetylation ,Proteome ,Acetyl-CoA ,Metabolome ,Gene silencing ,petunia ,Growth and Development ,metabolic homeostasis - Abstract
Cytosolic acetyl-CoA is an intermediate of the synthesis of most secondary metabolites and the source of acetyl for protein acetylation. The formation of cytosolic acetyl-CoA from citrate is catalysed by ATP-citrate lyase (ACL). However, the function of ACL in global metabolite synthesis and global protein acetylation is not well known. Here, four genes, PaACLA1, PaACLA2, PaACLB1, and PaACLB2, which encode the ACLA and ACLB subunits of ACL in Petunia axillaris, were identified as the same sequences in Petunia hybrida ‘Ultra’. Silencing of PaACLA1-A2 and PaACLB1-B2 led to abnormal leaf and flower development, reduced total anthocyanin content, and accelerated flower senescence in petunia ‘Ultra’. Metabolome and acetylome analysis revealed that PaACLB1-B2 silencing increased the content of many downstream metabolites of acetyl-CoA metabolism and the levels of acetylation of many proteins in petunia corollas. Mechanistically, the metabolic stress induced by reduction of acetyl-CoA in PaACL-silenced petunia corollas caused global and specific changes in the transcriptome, the proteome, and the acetylome, with the effect of maintaining metabolic homeostasis. In addition, the global proteome and acetylome were negatively correlated under acetyl-CoA deficiency. Together, our results suggest that ACL acts as an important metabolic regulator that maintains metabolic homeostasis by promoting changes in the transcriptome, proteome. and acetylome., PaACL silencing reduced anthocyanin contents, accelerated flower senescence, and changed the proteome and acetylome to maintain metabolic homeostasis in petunia
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- 2020
10. Suppression of chorismate synthase, which is localized in chloroplasts and peroxisomes, results in abnormal flower development and anthocyanin reduction in petunia
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Juanxu Liu, Zeyu Chen, Huina Zhao, Jinyi Han, Shiwei Zhong, and Yixun Yu
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0106 biological sciences ,0301 basic medicine ,Chorismate synthase ,Chloroplasts ,Plant physiology ,lcsh:Medicine ,Flowers ,01 natural sciences ,Petunia ,Article ,Anthocyanins ,03 medical and health sciences ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Peroxisomes ,Aromatic amino acids ,Shikimate pathway ,Plastid ,lcsh:Science ,Peroxisomal targeting signal ,Plant Proteins ,Multidisciplinary ,biology ,Chemistry ,lcsh:R ,fungi ,food and beverages ,Peroxisome ,biology.organism_classification ,Chloroplast ,030104 developmental biology ,Biochemistry ,biology.protein ,lcsh:Q ,Phosphorus-Oxygen Lyases ,Plant sciences ,010606 plant biology & botany - Abstract
In plants, the shikimate pathway generally occurs in plastids and leads to the biosynthesis of aromatic amino acids. Chorismate synthase (CS) catalyses the last step of the conversion of 5-enolpyruvylshikimate 3-phosphate (EPSP) to chorismate, but the role of CS in the metabolism of higher plants has not been reported. In this study, we found that PhCS, which is encoded by a single-copy gene in petunia (Petunia hybrida), contains N-terminal plastidic transit peptides and peroxisomal targeting signals. Green fluorescent protein (GFP) fusion protein assays revealed that PhCS was localized in chloroplasts and, unexpectedly, in peroxisomes. Petunia plants with reduced PhCS activity were generated through virus-induced gene silencing and further characterized. PhCS silencing resulted in reduced CS activity, severe growth retardation, abnormal flower and leaf development and reduced levels of folate and pigments, including chlorophylls, carotenoids and anthocyanins. A widely targeted metabolomics analysis showed that most primary and secondary metabolites were significantly changed in pTRV2-PhCS-treated corollas. Overall, the results revealed a clear connection between primary and specialized metabolism related to the shikimate pathway in petunia.
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- 2020
11. The N
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Weiyuan, Yang, Jie, Meng, Juanxu, Liu, Beibei, Ding, Tao, Tan, Qian, Wei, and Yixun, Yu
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Petunia ,Epigenome ,Adenosine ,Gene Expression Regulation, Plant ,High-Throughput Nucleotide Sequencing ,RNA, Messenger ,Ethylenes ,News and Views - Abstract
N
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- 2020
12. PhERF6, interacting with EOBI, negatively regulates fragrance biosynthesis in petunia flowers
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Lu Shao, Yixun Yu, Qian Chen, Li Yang, Juanxu Liu, Fei Liu, and Zhina Xiao
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0106 biological sciences ,0301 basic medicine ,Propanols ,Physiology ,Down-Regulation ,Electrophoretic Mobility Shift Assay ,Flowers ,Plant Science ,Biology ,Genes, Plant ,01 natural sciences ,Petunia ,Fluorescence ,03 medical and health sciences ,Bimolecular fluorescence complementation ,Protein Domains ,Gene Expression Regulation, Plant ,RNA interference ,Gene expression ,Gene silencing ,MYB ,Gene Silencing ,RNA, Messenger ,Promoter Regions, Genetic ,Gene ,Plant Proteins ,Cell Nucleus ,fungi ,food and beverages ,Promoter ,Ethylenes ,biology.organism_classification ,Up-Regulation ,030104 developmental biology ,Biochemistry ,Odorants ,Volatilization ,Protein Binding ,Subcellular Fractions ,Transcription Factors ,010606 plant biology & botany - Abstract
In petunia, the production of volatile benzenoids/phenylpropanoids determines floral aroma, highly regulated by development, rhythm and ethylene. Previous studies identified several R2R3-type MYB trans-factors as positive regulators of scent biosynthesis in petunia flowers. Ethylene response factors (ERFs) have been shown to take part in the signal transduction of hormones, and regulation of metabolism and development processes in various plant species. Using virus-induced gene silencing technology, a negative regulator of volatile benzenoid biosynthesis, PhERF6, was identified by a screen for regulators of the expression of genes related to scent production. PhERF6 expression was temporally and spatially connected with scent production and was upregulated by exogenous ethylene. Up-/downregulation of the mRNA level of PhERF6 affected the expression of ODO1 and several floral scent-related genes. PhERF6 silencing led to a significant increase in the concentrations of volatiles emitted by flowers. Yeast two-hybrid, bimolecular fluorescence complementation and co-immunoprecipitation assays indicated that PhERF6 interacted with the N-terminus of EOBI, which includes two DNA binding domains. Our results show that PhERF6 negatively regulates volatile production in petunia flowers by competing for the binding of the c-myb domains of the EOBI protein with the promoters of genes related to floral scent.
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- 2017
13. Mitochondrial citrate synthase plays important roles in anthocyanin synthesis in petunia
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Lili Gao, Yixun Yu, Lina Sang, Juanxu Liu, Huina Zhao, Ying Deng, and Guoju Chen
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0106 biological sciences ,0301 basic medicine ,Flavonoid ,Citrate (si)-Synthase ,Flowers ,Plant Science ,Mitochondrion ,01 natural sciences ,Petunia ,Anthocyanins ,03 medical and health sciences ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Genetics ,Citrate synthase ,Microbody ,chemistry.chemical_classification ,biology ,fungi ,food and beverages ,General Medicine ,Tricarboxylic acid ,biology.organism_classification ,Genes, Mitochondrial ,030104 developmental biology ,Enzyme ,Malonyl-CoA ,chemistry ,Biochemistry ,biology.protein ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
Anthocyanins are important flavonoid pigments in plants. Malonyl CoA is an important intermediate in anthocyanin synthesis, and citrate, formed by citrate synthase (CS) catalysing oxaloacetate, is the precursor for the formation of malonyl-CoA. CS is composed of two isoforms, mitochondrial citrate synthase (mCS), a key enzyme of the tricarboxylic acid (TCA) cycle, and citrate synthase (CSY) localizated in microbodies in plants. However, no CS isoform involvement in anthocyanin synthesis has been reported. In this study, we identified the entire CS family in petunia (Petunia hybrida): PhmCS, PhCSY1 and PhCSY2. We obtained petunia plants silenced for the three genes. PhmCS silencing resulted in abnormal development of leaves and flowers. The contents of citrate and anthocyanins were significantly reduced in flowers in PhmCS-silenced plants. However, silencing of PhCSY1 and/or PhCSY2 did not cause a visible phenotype change in petunia. These results showed that PhmCS is involved in anthocyanin synthesis and the development of leaves and flowers, and that the citrate involved in anthocyanin synthesis mainly derived from mitochondria rather than microbodies in petunia.
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- 2021
14. Proteomes and Ubiquitylomes Analysis Reveals the Involvement of Ubiquitination in Protein Degradation in Petunias
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Rongmin Wang, Guoju Chen, Yueyue Ma, Jianhang Guo, Weiyuan Yang, Juanxu Liu, Qian Wei, and yuyixun Yu
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0301 basic medicine ,Senescence ,Proteome ,Physiology ,Plant Science ,Endoplasmic-reticulum-associated protein degradation ,Protein degradation ,Real-Time Polymerase Chain Reaction ,Petunia ,Transcriptome ,03 medical and health sciences ,Plant Growth Regulators ,Ubiquitin ,Gene Expression Regulation, Plant ,Genetics ,Amino Acids ,Plant Proteins ,Volatile Organic Compounds ,biology ,Gene Expression Profiling ,Ubiquitination ,Endoplasmic Reticulum-Associated Degradation ,Articles ,Ethylenes ,biology.organism_classification ,Molecular biology ,Cell biology ,030104 developmental biology ,biology.protein ,Plant hormone - Abstract
Petal senescence is a complex programmed process. It has been demonstrated previously that treatment with ethylene, a plant hormone involved in senescence, can extensively alter transcriptome and proteome profiles in plants. However, little is known regarding the impact of ethylene on posttranslational modification (PTM) or the association between PTM and the proteome. Protein degradation is one of the hallmarks of senescence, and ubiquitination, a major PTM in eukaryotes, plays important roles in protein degradation. In this study, we first obtained reference petunia (Petunia hybrida) transcriptome data via RNA sequencing. Next, we quantitatively investigated the petunia proteome and ubiquitylome and the association between them in petunia corollas following ethylene treatment. In total, 51,799 unigenes, 3,606 proteins, and 2,270 ubiquitination sites were quantified 16 h after ethylene treatment. Treatment with ethylene resulted in 14,448 down-regulated and 6,303 up-regulated unigenes (absolute log2 fold change > 1 and false discovery rate < 0.001), 284 down-regulated and 233 up-regulated proteins, and 320 up-regulated and 127 down-regulated ubiquitination sites using a 1.5-fold threshold (P < 0.05), indicating that global ubiquitination levels increase during ethylene-mediated corolla senescence in petunia. Several putative ubiquitin ligases were up-regulated at the protein and transcription levels. Our results showed that the global proteome and ubiquitylome were negatively correlated and that ubiquitination could be involved in the degradation of proteins during ethylene-mediated corolla senescence in petunia. Ethylene regulates hormone signaling transduction pathways at both the protein and ubiquitination levels in petunia corollas. In addition, our results revealed that ethylene increases the ubiquitination levels of proteins involved in endoplasmic reticulum-associated degradation.
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- 2016
15. Corrigendum: PaACL silencing accelerates flower senescence and changes proteome to maintain metabolic homeostasis in Petunia hybrida
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Yixun Yu, Lina Sang, Huina Zhao, Xinyou Zhang, Shiwei Zhong, Zeyu Chen, Guoju Chen, Juanxu Liu, and Qian Wei
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Senescence ,Proteome ,Physiology ,Metabolic homeostasis ,Flowers ,Plant Science ,Biology ,Petunia hybrida ,Cell biology ,Petunia ,Acetyl Coenzyme A ,ATP Citrate (pro-S)-Lyase ,Homeostasis ,Gene silencing ,Corrigendum - Abstract
Cytosolic acetyl-CoA is an intermediate of the synthesis of most secondary metabolites and the source of acetyl for protein acetylation. The formation of cytosolic acetyl-CoA from citrate is catalysed by ATP-citrate lyase (ACL). However, the function of ACL in global metabolite synthesis and global protein acetylation is not well known. Here, four genes, PaACLA1, PaACLA2, PaACLB1, and PaACLB2, which encode the ACLA and ACLB subunits of ACL in Petunia axillaris, were identified as the same sequences in Petunia hybrida 'Ultra'. Silencing of PaACLA1-A2 and PaACLB1-B2 led to abnormal leaf and flower development, reduced total anthocyanin content, and accelerated flower senescence in petunia 'Ultra'. Metabolome and acetylome analysis revealed that PaACLB1-B2 silencing increased the content of many downstream metabolites of acetyl-CoA metabolism and the levels of acetylation of many proteins in petunia corollas. Mechanistically, the metabolic stress induced by reduction of acetyl-CoA in PaACL-silenced petunia corollas caused global and specific changes in the transcriptome, the proteome, and the acetylome, with the effect of maintaining metabolic homeostasis. In addition, the global proteome and acetylome were negatively correlated under acetyl-CoA deficiency. Together, our results suggest that ACL acts as an important metabolic regulator that maintains metabolic homeostasis by promoting changes in the transcriptome, proteome. and acetylome.
- Published
- 2020
16. PhCESA3 silencing inhibits elongation and stimulates radial expansion in petunia
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Mei Bai, Weiyuan Yang, Guoju Chen, Qian Wei, Li Hu, Juanxu Liu, Hong Wu, Yixun Yu, and Yuanping Cai
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0106 biological sciences ,0301 basic medicine ,DNA, Complementary ,Mutant ,Flowers ,Plant disease resistance ,Genes, Plant ,01 natural sciences ,Petunia ,Article ,03 medical and health sciences ,Cell Wall ,Gene Expression Regulation, Plant ,Botany ,Arabidopsis thaliana ,Gene silencing ,Gene Silencing ,RNA, Messenger ,Cellulose ,Phylogeny ,Cell Size ,Plant Proteins ,Regulation of gene expression ,Multidisciplinary ,ATP synthase ,biology ,fungi ,food and beverages ,biology.organism_classification ,Cell biology ,Dwarfing ,Fertility ,Phenotype ,030104 developmental biology ,Glucosyltransferases ,biology.protein ,010606 plant biology & botany - Abstract
Cellulose synthase catalytic subunits (CESAs) play important roles in plant growth, development and disease resistance. Previous studies have shown an essential role of Arabidopsis thaliana CESA3 in plant growth. However, little is known about the role of CESA3 in species other than A. thaliana. To gain a better understanding of CESA3, the petunia (Petunia hybrida) PhCESA3 gene was isolated, and the role of PhCESA3 in plant growth was analyzed in a wide range of plants. PhCESA3 mRNA was present at varying levels in tissues examined. VIGS-mediated PhCESA3 silencing resulted in dwarfing of plant height, which was consistent with the phenotype of the A. thaliana rsw1 mutant (a temperature-sensitive allele of AtCESA1), the A. thaliana cev1 mutant (the AtCESA3 mild mutant), and the antisense AtCESA3 line. However, PhCESA3 silencing led to swollen stems, pedicels, filaments, styles and epidermal hairs as well as thickened leaves and corollas, which were not observed in the A. thaliana cev1 mutant, the rsw1 mutant and the antisense AtCESA3 line. Further micrographs showed that PhCESA3 silencing reduced the length and increased the width of cells, suggesting that PhCESA3 silencing inhibits elongation and stimulates radial expansion in petunia.
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- 2017
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17. PhGRL2 Protein, Interacting with PhACO1, Is Involved in Flower Senescence in the Petunia
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Weiyuan Yang, Juanxu Liu, Ji Zhao, Shan Zhong, Fang Huang, Yinyan Tan, Na Tang, Yixun Yu, and Jiefu Guan
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Regulation of gene expression ,Senescence ,Flowers ,Plant Science ,Plasma protein binding ,Biology ,biology.organism_classification ,Petunia ,Cell biology ,Gene Expression Regulation, Plant ,Molecular Biology ,Plant Proteins ,Protein Binding - Published
- 2014
18. The N¹-Methyladenosine Methylome of Petunia mRNA.
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Weiyuan Yang, Jie Meng, Juanxu Liu, Beibei Ding, Tao Tan, Qian Wei, and Yixun Yu
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- 2020
- Full Text
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19. Direct somatic embryogenesis from leaf and petiole explants of Spathiphyllum ‘Supreme’ and analysis of regenerants using flow cytometry
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Jianjun Chen, Jietang Zhao, Jin Cui, Juanxu Liu, Feixiong Liao, and Richard J. Henny
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Somatic embryogenesis ,biology ,Somatic cell ,Spathiphyllum ,Botany ,Embryo ,Transplanting ,Horticulture ,Ploidy ,biology.organism_classification ,Petiole (botany) ,Explant culture - Abstract
This study established a method of regenerating Spathiphyllum ‘Supreme’ through direct somatic embryogenesis. Somatic embryos occurred in leaf and petiole explants cultured in the dark on a Murashige and Skoog basal medium supplemented with 2.27, 4.54, or 9.08 μM N-phenyl-N′-1,2,3-thiadiazol-5-ylurea (TDZ) in combination with 1.08 μM α-naphthalene acetic acid or 2.26 μM 2,4-dichlorophenoxyacetic acid (2,4-D). Explants with somatic embryos were transferred to fresh medium containing the same concentrations of growth regulators under lighted conditions for embryo conversion. The highest frequencies of leaf explants with somatic embryos and embryo conversion were both 84.4 %, which were induced by 9.08 μM TDZ with 2.26 μM 2,4-D. The frequencies for somatic embryo induction and embryo conversion were both 100 % when petiole explants were induced by 4.54 μM TDZ with 2.26 μM 2,4-D. The number of plantlets produced per leaf explant and petiole explant were as high as 67.4 and 74.4, respectively. Plantlets after transplanting to a soilless substrate grew vigorously in a shaded greenhouse. Liners were stable without phenotypic variation. Flow cytometry analysis of randomly selected plants showed that they all had a single identical peak. The mean nuclear DNA index for ‘Supreme’ was 1.568, and the nuclear DNA content was 14.222 pg 2C−1. The estimated genome size for ‘Supreme’ was 6,954.5 Mbp 1C−1 with a CV at 4.008 %. The results suggest that the regenerated plants have a stable ploidy level and this established regeneration method can be used for highly effective propagation of uniform Spathiphyllum ‘Supreme’.
- Published
- 2012
20. Regeneration of Chlorophytum amaniense ‘Fire Flash’ Through Indirect Shoot Organogenesis
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Jin Cui, Juanxu Liu, Jianjun Chen, and Richard J. Henny
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Horticulture ,Lilium ,biology ,Callus formation ,Callus ,Shoot ,Botany ,Organogenesis ,Transplanting ,biology.organism_classification ,Explant culture ,Sierra leone - Abstract
Chlorophytum amaniense Engl. ‘Fire Flash’ is a popular exotic ornamental foliage plant as a result of its unique coral-colored midribs and petioles and tolerance to interior low light levels. Currently, demand for propagative materials exceeds the availability of seeds. This study was intended to develop an in vitro culture method for rapid propagation of this cultivar. Leaf and sprouted seed explants were cultured on a Murashige and Skoog basal medium supplemented with different cytokinins with 1.1 μM α-naphthalene acetic acid (NAA) or 2.3 μM 2,4-dichlorophenoxyacetic acid (2,4-D). Leaf explants showed poor responses in callus production and no adventitious shoots were obtained. Callus formation frequencies from sprouted seeds were 71% and 85% when induced by 9.8 μM N6-(2-isopentyl) adenine (2iP) with 1.1 μM NAA and 9.1 μM N-phenyl-N′-1,2,3-thiadiazol-5-ylurea (TDZ) with 1.1 μM NAA, respectively. Adventitious shoots occurred after the induced calluses were subcultured on the same concentrations of TDZ or 2iP with NAA. Shoot formation frequencies from calluses cultured on TDZ with NAA and 2iP with NAA were 92% and 85%, and the corresponding mean shoot numbers were 37 and 31 per piece of callus (1 cm3), respectively. Adventitious shoots rooted at 100% after transferring to the basal medium containing 4.4 μM 6-benzylaminopurine (BA) with 2.7 μM NAA. Plantlets, after transplanting to a soilless substrate were easily acclimatized in a shaded greenhouse under a photosynthetic photon flux (PPF) density of 200 μmol·m−2·s−1. Regenerated plants grew vigorously without undesirable basal branching or distorted leaves. This newly established regeneration method can provide the foliage plant industry with a means for rapidly propagating ‘Fire Flash’ liners in a year-round fashion.
- Published
- 2011
21. Cloning and characterization of a DCEIN2 gene responsive to ethylene and sucrose in cut flower carnation
- Author
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Jing Wang, Huinan Wang, Juan Liu, Zhaoqi Zhang, Juanxu Liu, Zhaodi Fu, and Yixun Yu
- Subjects
Ethylene ,biology ,Dianthus ,Caryophyllaceae ,Carnation ,Horticulture ,biology.organism_classification ,Molecular biology ,chemistry.chemical_compound ,chemistry ,Rapid amplification of cDNA ends ,Complementary DNA ,Gene expression ,Petal - Abstract
Carnation (Dianthus caryophyllus L.) is an important ornamental crop and serves as a model system for investigating ethylene-sensitive flower senescence. EIN2 (ethylene insensitive 2) is a central component of the ethylene signal transduction pathway in plants, but the transcriptional regulation of the EIN2 gene in response to ethylene has not yet been elucidated. We identified a cDNA clone encoding a putative EIN2-like protein (DCEIN2) from total RNA isolated from senescing carnation petals using reverse transcription-PCR and rapid amplification of cDNA ends procedures. The cDNA contained an open reading frame of 3828 bp corresponding to 1275 amino acids. The northern blot results indicated that DCEIN2 expression in both the petals and ovaries was enhanced by treatment with exogenous ethylene and sugar, respectively, and was inhibited by silver thiosulfate. In the carnation vegetative tissues, mRNAs for DCEIN2 were present in the leaves and stems, but they were not detected in the roots.
- Published
- 2010
22. Identification and expression analysis of ERF transcription factor genes in petunia during flower senescence and in response to hormone treatments
- Author
-
Yixun Yu, Juan Liu, Zhaodi Fu, Jingyu Li, Huinan Wang, and Juanxu Liu
- Subjects
Physiology ,Molecular Sequence Data ,Flowers ,Plant Science ,Petunia ,chemistry.chemical_compound ,Plant Growth Regulators ,Gene Expression Regulation, Plant ,Arabidopsis ,Gene expression ,ethylene ,Amino Acid Sequence ,flower senescence ,Abscisic acid ,Gene ,Plant Proteins ,Genetics ,Methyl jasmonate ,biology ,fungi ,food and beverages ,Ethylenes ,biology.organism_classification ,Research Papers ,Protein Structure, Tertiary ,DNA-Binding Proteins ,chemistry ,ERF ,gene expression ,Petal ,Transcription Factor Gene ,Sequence Alignment - Abstract
Ethylene-responsive element-binding factor (ERF) genes constitute one of the largest transcription factor gene families in plants. In Arabidopsis and rice, only a few ERF genes have been characterized so far. Flower senescence is associated with increased ethylene production in many flowers. However, the characterization of ERF genes in flower senescence has not been reported. In this study, 13 ERF cDNAs were cloned from petunia. Based on the sequence characterization, these PhERFs could be classified into four of the 12 known ERF families. Their predicted amino acid sequences exhibited similarities to ERFs from other plant species. Expression analyses of PhERF mRNAs were performed in corollas and gynoecia of petunia flower. The 13 PhERF genes displayed differential expression patterns and levels during natural flower senescence. Exogenous ethylene accelerates the transcription of the various PhERF genes, and silver thiosulphate (STS) decreased the transcription of several PhERF genes in corollas and gynoecia. PhERF genes of group VII showed a strong association with the rise in ethylene production in both petals and gynoecia, and might be associated particularly with flower senescence in petunia. The effect of sugar, methyl jasmonate, and the plant hormones abscisic acid, salicylic acid, and 6-benzyladenine in regulating the different PhERF transcripts was investigated. Functional nuclear localization signal analyses of two PhERF proteins (PhERF2 and PhERF3) were carried out using fluorescence microscopy. These results supported a role for petunia PhERF genes in transcriptional regulation of petunia flower senescence processes.
- Published
- 2010
23. Regeneration of Dracaena surculosa Through Indirect Shoot Organogenesis
- Author
-
Richard J. Henny, Jiahua Xie, Jianjun Chen, Min Deng, and Juanxu Liu
- Subjects
education.field_of_study ,fungi ,Population ,food and beverages ,Organogenesis ,Horticulture ,Biology ,Transplantation ,Cutting ,Micropropagation ,Callus ,Botany ,Shoot ,education ,Explant culture - Abstract
This study established a method of regenerating Dracaena surculosa Lindl. ‘Florida Beauty’ through indirect shoot organogenesis. Bud, leaf, and stem explants were cultured on a Murashige and Skoog basal medium supplemented with N6-(2-isopentyl) adenine (2iP) at 12.3 and 24.6 μM with 3-indoleacetic acid (IAA) at 0, 1.1, and 2.3 μM, respectively, and 2iP at 36.9, 49.2, 61.5, and 73.8 μM with IAA at 1.1 and 2.3 μM, respectively. Calluses were induced from leaf explants but failed to produce adventitious shoots. Calluses were also induced from stem and bud explants cultured on the basal medium containing 12.3 μM 2iP and 2.3 μM IAA, 24.6 μM 2iP or higher with either 1.1 or 2.3 μM IAA. The highest callus induction frequency was 63.2% from stem explants and 69.6% from bud explants when they were cultured on the basal medium supplemented with 49.2 μM 2iP and 2.3 μM IAA. The highest shoot formation frequency was 65.7% from stem-derived callus cultured on the basal medium containing 61.5 μM 2iP and 1.1 μM IAA and 88% from bud-derived callus cultured with 49.2 μM 2iP and 1.1 μM IAA. The highest number of shoots per piece of stem- and bud-derived calluses was 3.8 and 6.7, respectively. Adventitious shoots developed better root systems in the basal medium supplemented with 2.0 μM IAA. Plantlets after transplantation into a soilless substrate grew vigorously in a shaded greenhouse under a maximum photosynthetic photon flux density of 300 μmol·m−2·s−1. Neither disease incidence nor somaclonal variants were observed in the regenerated population. This established method could be used for efficient micropropagation of D. surculosa, and the availability of tissue-cultured liners could reduce the dependency on imported cuttings, which often bring new or invasive pests into the United States.
- Published
- 2010
24. Plant Regeneration through Protocorm-like Bodies Induced from Nodal Explants of Syngonium podophyllum ‘White Butterfly’
- Author
-
Min Deng, Juanxu Liu, Jin Cui, Jianjun Chen, and Richard J. Henny
- Subjects
Horticulture ,biology ,Micropropagation ,Shoot ,Botany ,Transplanting ,Myrothecium roridum ,Organogenesis ,Syngonium podophyllum ,biology.organism_classification ,Petiole (botany) ,Explant culture - Abstract
Syngonium podophyllum ‘White Butterfly’, one of the most popular ornamental foliage plants, is propagated almost exclusively through in vitro shoot culture. Ex vitro rooting, however, has been associated with severe Myrothecium leaf spot (Myrothecium roridum Tode ex Fr.). The objective of this study was to establish a method for regenerating well-rooted plantlets before ex vitro transplanting. Leaf and petiole explants were cultured on a Murashige and Skoog (MS) basal medium supplemented with N-(2-chloro-4-pyridyl)-N′-phenylurea (CPPU), N-phenyl-N′-1,2,3-thiadiazol-5-ylurea (TDZ), 6-benzyladenine (BA), or N-isopentenylaminopurine (2iP) with α-naphthalene acetic acid (NAA) and 2,4-dichlorophenoxyacetic acid (2,4-D), respectively. Calli formed from leaf explants cultured on the basal medium supplemented with CPPU or TDZ with 2,4-D or with NAA as well as from petiole explants cultured on the medium supplemented with BA, CPPU, or TDZ with 2,4-D or NAA. The calli, however, failed to differentiate, and shoot organogenesis did not occur. Culture of nodal explants on the MS basal medium supplemented with 9.84 μm 2iP, 8.88 μm BA, 8.07 μm CPPU, or 9.08 μm TDZ with 2.26 μm 2,4-D resulted in the formation of protocorm-like bodies, adventitious shoots, and subsequently well-rooted plantlets. MS basal medium supplemented with 19.68 μm 2iP and 1.07 μm NAA resulted in the highest percentage (92.9%) of nodal explants producing protocorm-like bodies and an average of 16.9 well-rooted plantlets per nodal explant. Adventitious shoots were able to root in the initial induction medium, but better root development occurred after shoots with protocorm-like bodies were transferred onto MS basal medium supplemented with 9.84 μm 2iP and 2.69 μm NAA. Regenerated plantlets were stable and grew vigorously with 100% survival rates after ex vitro transplanting to a container substrate in a shaded greenhouse.
- Published
- 2008
25. Functional characterization of PhGR and PhGRL1 during flower senescence in the petunia
- Author
-
Yixun Yu, Weiyuan Yang, Na Tang, Yinyan Tan, Guoju Chen, Juanxu Liu, and Shan Zhong
- Subjects
Senescence ,Ethylene ,Molecular Sequence Data ,Reversion ,Plant Science ,Flowers ,Genes, Plant ,Real-Time Polymerase Chain Reaction ,Petunia ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Arabidopsis ,Botany ,Gene silencing ,Amino Acid Sequence ,Gene Silencing ,RNA, Messenger ,Gene ,Phylogeny ,Plant Proteins ,biology ,fungi ,food and beverages ,General Medicine ,Ethylenes ,biology.organism_classification ,Cell biology ,chemistry ,Organ Specificity ,Plant biochemistry ,Agronomy and Crop Science ,Sequence Alignment ,Signal Transduction - Abstract
Petunia PhGRL1 suppression accelerated flower senescence and increased the expression of the genes downstream of ethylene signaling, whereas PhGR suppression did not. Ethylene plays an important role in flowers senescence. Homologous proteins Green-Ripe and Reversion to Ethylene sensitivity1 are positive regulators of ethylene responses in tomato and Arabidopsis, respectively. The petunia flower has served as a model for the study of ethylene response during senescence. In this study, petunia PhGR and PhGRL1 expression was analyzed in different organs, throughout floral senescence, and after exogenous ethylene treatment; and the roles of PhGR and PhGRL1 during petunia flower senescence were investigated. PhGRL1 suppression mediated by virus-induced gene silencing accelerated flower senescence and increased ethylene production; however, the suppression of PhGR did not. Taken together, these data suggest that PhGRL1 is involved in negative regulation of flower senescence, possibly via ethylene production inhibition and consequently reduced ethylene signaling activation.
- Published
- 2015
26. The acyl-activating enzyme PhAAE13 is an alternative enzymatic source of precursors for anthocyanin biosynthesis in petunia flowers
- Author
-
Huina Zhao, Heping Liu, Qian Wei, Yixun Yu, Guoju Chen, and Juanxu Liu
- Subjects
0106 biological sciences ,0301 basic medicine ,Ethylene ,Ultraviolet Rays ,Physiology ,petunia ,Gene Expression ,Flowers ,Plant Science ,Malonic acid ,01 natural sciences ,Petunia ,Anthocyanins ,03 medical and health sciences ,chemistry.chemical_compound ,malonyl-CoA ,Complementary DNA ,Botany ,Amino Acid Sequence ,Gene Silencing ,Phylogeny ,Plant Proteins ,malonic acid ,chemistry.chemical_classification ,biology ,fungi ,food and beverages ,Fatty acid ,Ethylenes ,biology.organism_classification ,Malonates ,Pyruvate carboxylase ,carbohydrates (lipids) ,030104 developmental biology ,Malonyl-CoA ,Biochemistry ,chemistry ,Anthocyanin ,anthocyanin synthesis ,Sequence Alignment ,AAE13 ,Research Paper ,010606 plant biology & botany - Abstract
Highlight The silencing of petunia PhAAE13, encoding malonyl-CoA synthetase, significantly reduced anthocyanin accumulation and increased the malonic acid content in flowers, suggesting the involvement of PhAAE13 in anthocyanin biosynthesis in petunia., Anthocyanins, a class of flavonoids, are responsible for the orange to blue coloration of flowers and act as visual attractors to aid pollination and seed dispersal. Malonyl-CoA is the precursor for the formation of flavonoids and anthocyanins. Previous studies have suggested that malonyl-CoA is formed almost exclusively by acetyl-CoA carboxylase, which catalyzes the ATP-dependent formation of malonyl-CoA from acetyl-CoA and bicarbonate. In the present study, the full-length cDNA of Petunia hybrida acyl-activating enzyme 13 (PhAAE13), a member of clade VII of the AAE superfamily that encodes malonyl-CoA synthetase, was isolated. The expression of PhAAE13 was highest in corollas and was down-regulated by ethylene. Virus-induced gene silencing of petunia PhAAE13 significantly reduced anthocyanin accumulation, fatty acid content, and cuticular wax components content, and increased malonic acid content in flowers. The silencing of PhAAE3 and PhAAE14, the other two genes in clade VII of the AAE superfamily, did not change the anthocyanin content in petunia flowers. This study provides strong evidence indicating that PhAAE13, among clade VII of the AAE superfamily, is specifically involved in anthocyanin biosynthesis in petunia flowers.
- Published
- 2016
27. Relationship between Rh-RTH1 and ethylene receptor gene expression in response to ethylene in cut rose
- Author
-
Yixun Yu, Jing Wang, Zhaoqi Zhang, Juanxu Liu, and Huinan Wang
- Subjects
Sucrose ,Ethylene ,Molecular Sequence Data ,Receptors, Cell Surface ,Plant Science ,Flowers ,Biology ,1-Methylcyclopropene ,Rosa ,chemistry.chemical_compound ,Plant Growth Regulators ,Gene Expression Regulation, Plant ,Complementary DNA ,Gene expression ,Amino Acid Sequence ,Cloning, Molecular ,Gene ,Plant Proteins ,chemistry.chemical_classification ,Messenger RNA ,General Medicine ,Sequence Analysis, DNA ,Ethylenes ,Amino acid ,Biochemistry ,chemistry ,RNA, Plant ,Petal ,Agronomy and Crop Science - Abstract
A cDNA clone encoding a putative RTE1-like protein (Rh-RTH1) was obtained from total RNA isolated from senescing rose (Rosa hybrida cv. Tineke) petals using RT-PCR and RACE techniques. The cDNA (1,061 bp) contained an open reading frame of 684 bp corresponding to 227 amino acids. The amino acid sequence had 60.0, 49.6, 61.2, 42.5 and 39.8% identity with that of Arabidopsis RTH, RTE1, tomato GRL2, GRL1 and GR, respectively. Northern hybridization indicated that Rh-RTH1 expression is enhanced by endogenous and exogenous ethylene and inhibited by 1-MCP in petals and gynoecia. Rh-RTH1 expression partly correlated with sites of the ethylene receptor gene Rh-ETR1 and Rh-ETR3 expression, such as the petals, gynoecia, roots, and buds. The induction of Rh-RTH1 and Rh-ETR3 expression was substantially suppressed by 1-MCP treatment, while Rh-ETR1 expression was not reduced by 1-MCP treatment. Following treatment of flowers with sucrose, the level of Rh-RTH1 and Rh-ETR3 mRNA was only slightly decreased in petals and gynoecia. Upon wounding treatment, Rh-RTH1, Rh-ETR1 and Rh-ETR3 showed a quick increase in mRNA accumulation which was positively correlated with the increase in ethylene production. The expression of Rh-RTH1 showed partial correlation with that of Rh-ETR1 and Rh-ETR3.
- Published
- 2010
28. The acyl-activating enzyme PhAAE13 is an alternative enzymatic source of precursors for anthocyanin biosynthesis in petunia flowers.
- Author
-
Guoju Chen, Heping Liu, Qian Wei, Huina Zhao, Juanxu Liu, and Yixun Yu
- Subjects
PETUNIAS ,BUTYRATE-CoA ligase ,ANTHOCYANINS ,BIOSYNTHESIS ,MALONIC acid ,SEED dispersal - Abstract
Anthocyanins, a class of flavonoids, are responsible for the orange to blue coloration of flowers and act as visual attractors to aid pollination and seed dispersal. Malonyl-CoA is the precursor for the formation of flavonoids and anthocyanins. Previous studies have suggested that malonyl-CoA is formed almost exclusively by acetyl-CoA carboxylase, which catalyzes the ATP-dependent formation of malonyl-CoA from acetyl-CoA and bicarbonate. In the present study, the full-length cDNA of Petunia hybrida acyl-activating enzyme 13 (PhAAE13), a member of clade VII of the AAE superfamily that encodes malonyl-CoA synthetase, was isolated. The expression of PhAAE13 was highest in corollas and was down-regulated by ethylene. Virus-induced gene silencing of petunia PhAAE13 significantly reduced anthocyanin accumulation, fatty acid content, and cuticular wax components content, and increased malonic acid content in flowers. The silencing of PhAAE3 and PhAAE14, the other two genes in clade VII of the AAE superfamily, did not change the anthocyanin content in petunia flowers. This study provides strong evidence indicating that PhAAE13, among clade VII of the AAE superfamily, is specifically involved in anthocyanin biosynthesis in petunia flowers. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
29. Proteomes and Ubiquitylomes Analysis Reveals the Involvement of Ubiquitination in Protein Degradation in Petunias.
- Author
-
Jianhang Guo, Juanxu Liu, Qian Wei, Rongmin Wang, Weiyuan Yang, Yueyue Ma, Guoju Chen, and Yixun Yu
- Abstract
Petal senescence is a complex programmed process. It has been demonstrated previously that treatment with ethylene, a plant hormone involved in senescence, can extensively alter transcriptome and proteome profiles in plants. However, little is known regarding the impact of ethylene on posttranslational modification (PTM) or the association between PTM and the proteome. Protein degradation is one of the hallmarks of senescence, and ubiquitination, a major PTM in eukaryotes, plays important roles in protein degradation. In this study, we first obtained reference petunia (Petunia hybrida) transcriptome data via RNA sequencing. Next, we quantitatively investigated the petunia proteome and ubiquitylome and the association between them in petunia corollas following ethylene treatment. In total, 51,799 unigenes, 3,606 proteins, and 2,270 ubiquitination sites were quantified 16 h after ethylene treatment. Treatment with ethylene resulted in 14,448 down-regulated and 6,303 up-regulated unigenes (absolute log2 fold change > 1 and false discovery rate < 0.001), 284 down-regulated and 233 up-regulated proteins, and 320 up-regulated and 127 down-regulated ubiquitination sites using a 1.5-fold threshold (P < 0.05), indicating that global ubiquitination levels increase during ethylene-mediated corolla senescence in petunia. Several putative ubiquitin ligases were up-regulated at the protein and transcription levels. Our results showed that the global proteome and ubiquitylome were negatively correlated and that ubiquitination could be involved in the degradation of proteins during ethylene-mediated corolla senescence in petunia. Ethylene regulates hormone signaling transduction pathways at both the protein and ubiquitination levels in petunia corollas. In addition, our results revealed that ethylene increases the ubiquitination levels of proteins involved in endoplasmic reticulum-associated degradation. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
30. Expression and functional analysis of PhEOL1 and PhEOL2 during flower senescence in petunia.
- Author
-
Juanxu Liu, Ji Zhao, Zhina Xiao, Xinlei Chang, Guoju Chen, and Yixun Yu
- Subjects
- *
ETHYLENE derivatives , *ARABIDOPSIS , *BIOSYNTHESIS , *GENE expression , *ENZYME analysis - Abstract
The ethylene biosynthesis pathway controls flower senescence. Previous studies have shown that Arabidopsis ETHYLENE-OVERPRODUCER1 (ETO1) interacts specifically with and negatively regulates type 2 1-aminocyclopropane-1-carboxylate synthases (ACSs), the rate-limiting enzymes of ethylene biosynthesis. The ethylene biosynthesis pathway controls flower senescence in petunias (Petunia hybrida Juss.). However, the role of ETO1-like genes (EOLs) during flower senescence has not been investigated. Here, two full-length petunia EOL cDNAs, PhEOL1 and PhEOL2, were isolated. RT-PCR assays indicated that the expression of PhEOL1 and PhEOL2 increased after exogenous ethylene treatment. The VIGS-mediated silencing of PhEOL1 accelerated flower senescence and produced more ethylene than the control condition, whereas the silencing of PhEOL2 did not. Notably, the effects caused by PhEOL1 suppression were not enhanced by PhEOL2 suppression in corollas. In addition, the expression of two petunia type 2 PhACS genes increased during flower senescence and after ethylene treatment. A yeast two-hybrid assay showed that PhEOL1 interacts with both PhACS2 and PhACS3. It is possible that PhEOL1 is involved in flower senescence by interacting with type 2 PhACSs in petunias. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
31. Cloning and characterization of a DCEIN2 gene responsive to ethylene and sucrose in cut flower carnation.
- Author
-
Zhaodi Fu, Huinan Wang, Juan Liu, Juanxu Liu, Jing Wang, Zhaoqi Zhang, and Yixun Yu
- Abstract
Carnation ( Dianthus caryophyllus L.) is an important ornamental crop and serves as a model system for investigating ethylene-sensitive flower senescence. EIN2 (ethylene insensitive 2) is a central component of the ethylene signal transduction pathway in plants, but the transcriptional regulation of the EIN2 gene in response to ethylene has not yet been elucidated. We identified a cDNA clone encoding a putative EIN2-like protein (DCEIN2) from total RNA isolated from senescing carnation petals using reverse transcription-PCR and rapid amplification of cDNA ends procedures. The cDNA contained an open reading frame of 3828 bp corresponding to 1275 amino acids. The northern blot results indicated that DCEIN2 expression in both the petals and ovaries was enhanced by treatment with exogenous ethylene and sugar, respectively, and was inhibited by silver thiosulfate. In the carnation vegetative tissues, mRNAs for DCEIN2 were present in the leaves and stems, but they were not detected in the roots. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
32. Identification and expression analysis of ERF transcription factor genes in petunia during flower senescence and in response to hormone treatments.
- Author
-
Juanxu Liu, Jingyu Li, Huinan Wang, Zhaodi Fu, Juan Liu, and Yixun Yu
- Subjects
- *
PETUNIAS , *TRANSCRIPTION factors , *GENE expression in plants , *EFFECT of ethylene on plants , *ETHYLENE - Abstract
Ethylene-responsive element-binding factor (ERF) genes constitute one of the largest transcription factor gene families in plants. In Arabidopsis and rice, only a few ERF genes have been characterized so far. Flower senescence is associated with increased ethylene production in many flowers. However, the characterization of ERF genes in flower senescence has not been reported. In this study, 13 ERF cDNAs were cloned from petunia. Based on the sequence characterization, these PhERFs could be classified into four of the 12 known ERF families. Their predicted amino acid sequences exhibited similarities to ERFs from other plant species. Expression analyses of PhERF mRNAs were performed in corollas and gynoecia of petunia flower. The 13 PhERF genes displayed differential expression patterns and levels during natural flower senescence. Exogenous ethylene accelerates the transcription of the various PhERF genes, and silver thiosulphate (STS) decreased the transcription of several PhERF genes in corollas and gynoecia. PhERF genes of group VII showed a strong association with the rise in ethylene production in both petals and gynoecia, and might be associated particularly with flower senescence in petunia. The effect of sugar, methyl jasmonate, and the plant hormones abscisic acid, salicylic acid, and 6-benzyladenine in regulating the different PhERF transcripts was investigated. Functional nuclear localization signal analyses of two PhERF proteins (PhERF2 and PhERF3) were carried out using fluorescence microscopy. These results supported a role for petunia PhERF genes in transcriptional regulation of petunia flower senescence processes. [ABSTRACT FROM PUBLISHER]
- Published
- 2011
- Full Text
- View/download PDF
33. Regeneration of Dracaena surculosa Through Indirect Shoot Organogenesis.
- Author
-
Juanxu Liu, Min Deng, Jiahua Xie, Henny, Richard J., and Jianjun Chen
- Subjects
- *
DRACAENA , *PLANT shoots , *PLANT morphogenesis , *ADENINE , *PLANT stems - Abstract
This study established a method of regenerating Dracaena surculosa Lindl. 'Florida Beauty' through indirect shoot organogenesis. Bud, leaf, and stem explants were cultured on a Murashige and Skoog basal medium supplemented with N6-(2-isopentyl) adenine (2iP) at 12.3 and 24.6 µM with 3-indoleacetic acid (IAA) at 0, 1.1, and 2.3 µM, respectively, and 2iP at 36.9, 49.2, 61.5, and 73.8 µM with IAA at 1.1 and 2.3 µM, respectively. Calluses were induced from leaf explants but failed to produce adventitious shoots. Calluses were also induced from stem and bud explants cultured on the basal medium containing 12.3 µM 2iP and 2.3 µM IAA, 24.6 µM 2iP or higher with either 1.1 or 2.3 µM IAA. The highest callus induction frequency was 63.2% from stem explants and 69.6% from bud explants when they were cultured on the basal medium supplemented with 49.2 µM 2iP and 2.3 µM IAA. The highest shoot formation frequency was 65.7% from stem-derived callus cultured on the basal medium containing 61.5 µM 2iP and 1.1 µM IAA and 88% from bud-derived callus cultured with 49.2 µM 2iP and 1.1 µM IAA. The highest number of shoots per piece of stem- and bud-derived calluses was 3.8 and 6.7, respectively. Adventitious shoots developed better root systems in the basal medium supplemented with 2.0 µM IAA. Plantlets after transplantation into a soilless substrate grew vigorously in a shaded greenhouse under a maximum photosynthetic photon flux density of 300 µmol.m-2.s-1. Neither disease incidence nor somaclonal variants were observed in the regenerated population. This established method could be used for efficient micropropagation of D. surculosa, and the availability of tissue-cultured liners could reduce the dependency on imported cuttings, which often bring new or invasive pests into the United States. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
34. Plant Regeneration through Protocorm-like Bodies Induced from Nodal Explants of Syngonium podophyllum 'White Butterfly.'.
- Author
-
Jin Cui, Juanxu Liu, Min Deng, Jianjun Chen, and Henny, Richard J.
- Subjects
- *
PODOPHYLLUM , *REGENERATION (Botany) , *MYROTHECIUM , *BENZYLAMINOPURINE , *FOLIAGE plants , *ARACEAE , *NAPHTHALENE , *ACETIC acid - Abstract
Syngonium podophyllum 'White Butterfly', one of the most popular ornamental foliage plants, is propagated almost exclusively through in vitro shoot culture. Ex vitro rooting, however, has been associated with severe Myrothecium leaf spot (Myrothecium roridum Tode ex Fr.). The objective of this study was to establish a method for regenerating well-rooted plantlets before ex vitro transplanting. Leaf and petiole explants were cultured on a Murashige and Skoog (MS) basal medium supplemented with N-(2-chloro-4-pyridyl)-N'-phenylurea (CPPU), N-phenyl-N'-1,2, 3-thiadiazoi-5-ylurea (TDZ), 6-benzyladenine (BA), or N-isopentenylaminopurine (2iP) with α-naphthalene acetic acid (NAA) and 2,4-dichlorophenoxyacetic acid (2,4-D), respectively. Calli formed from leaf explants cultured on the basal medium supplemented with CPPU or TDZ with 2,4-D or with NAA as well as from petiole explants cultured on the medium supplemented with BA, CPPU, or TDZ with 2,4-D or NAA. The calli, however, failed to differentiate, and shoot organogenesis did not occur. Culture of nodal explants on the MS basal medium supplemented with 9.84 µM 2iP, 8.88 µM BA, 8.07 µM CPPU, or 9.08 µM TDZ with 2.26 µM 2,4-D resulted in the formation of protocorm-like bodies, adventitious shoots, and subsequently well-rooted plantlets. MS basal medium supplemented with 19.68 µM 2iP and 1.07 µM NAA resulted in the highest percentage (92.9%) of nodal explants producing protocorm-like bodies and an average of 16.9 well-rooted plantlets per nodal explant. Adventitious shoots were able to root in the initial induction medium, but better root development occurred after shoots with protocorm-like bodies were transferred onto MS basal medium supplemented with 9.84 µM 2iP and 2.69 µM NAA. Regenerated plantlets were stable and grew vigorously with 100% survival rates after ex vitro transplanting to a container substrate in a shaded greenhouse. [ABSTRACT FROM AUTHOR]
- Published
- 2008
- Full Text
- View/download PDF
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