23 results on '"Juanjuan Lyu"'
Search Results
2. An Improved Model for Circular RNA Overexpression: Using the Actin Intron Reveals High Circularization Efficiency
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Feiya Li, Juanjuan Lyu, Yang Yang, Qiwei Yang, Cristian Santos, and Burton B. Yang
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actin intron ,circRNA ,circular RNA ,overexpression ,splicing factor ,T4 intron ,Genetics ,QH426-470 - Abstract
Abstract Traditionally, the group 1 intron of the T4 td gene is used to generate a foreign circular sequence. However, the T4 system has been shown to be fairly inefficient in expressing circular RNA (circRNA). Here, a new method is developed to express circular sequences with high circularization efficiency to strengthen the confidence for future circRNA functional studies. CircRNA expression plasmids, constructed with different lengths derived from the actin intron (15‐nt, 30‐nt, 60‐nt, 100‐nt, 180‐nt) and T4 intron, are introduced into human and mouse cell lines 293T and B16. Junction detection and sequencing are used to determine successful circularization of introns and their expression efficiencies. An actin intron with a medium length (60‐nt–100‐nt) shows significantly increased efficiency of circularization, whereas intron‐100‐nt shows the best efficiency in most conditions. RNA pull‐down assays are designed to precipitate the splicing factors that are bound to the introns and intron/exon junction. The precipitated proteins are analyzed by mass spectrometry (MS), aiming to identify the possible underlying mechanism behind the high circularization efficiency. This expression system has been validated using different circRNAs, and such method shows potential in contributing to the expanding field of circRNA studies.
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- 2023
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3. Erratum - Transcription factor nuclear factor erythroid 2 p45-related factor 2 (NRF2) ameliorates sepsis-associated acute kidney injury by maintaining mitochondrial homeostasis and improving the mitochondrial function
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Zhijiang Chen, Huili Wang, Bin Hu, Xinxin Chen, Meiyu Zheng, Lili Liang, Juanjuan Lyu, and Qiyi Zeng
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Sepsis ,acute kidney injury ,mitochondria ,NRF2 ,inflammation ,Biology (General) ,QH301-705.5 - Abstract
This corrects the article published in European Journal of Histochemistry 2022;66:3412. doi: 10.4081/ejh.2022.3412.
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- 2023
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4. Transcription factor nuclear factor erythroid 2 p45-related factor 2 (NRF2) ameliorates sepsis-associated acute kidney injury by maintaining mitochondrial homeostasis and improving the mitochondrial function
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Zhijiang Chen, Huili Wang, Bin Hu, Xinxin Chen, Meiyu Zheng, Lili Liang, Juanjuan Lyu, and Qiyi Zeng
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sepsis ,acute kidney injury ,NRF2 ,mitochondrial ,inflammation ,Biology (General) ,QH301-705.5 - Abstract
Mitochondrial dysfunction has a role in sepsis-associated acute kidney injury (S-AKI), so the restoration of normal mitochondrial homeostasis may be an effective treatment strategy. Transcription factor nuclear factor erythroid 2 p45-related factor 2 (NRF2) is a main regulator of cell-redox homeostasis, and recent studies reported that NRF2 activation helped to preserve mitochondrial morphology and function under conditions of stress. However, the role of NRF2 in the process of S-AKI is still not well understood. The present study investigated whether NRF2 regulates mitochondrial homeostasis and influences mitochondrial function in S-AKI. We demonstrated activation of NRF2 in an in vitro model: lipopolysaccharide (LPS) challenge of ductal epithelial cells of rat renal tubules (NRK-52e cells), and an in vivo model: cecal ligation and puncture (CLP) of rats. Over-expression of NRF2 attenuated oxidative stress, apoptosis, and the inflammatory response; enhanced mitophagy and mitochondrial biogenesis; and mitigated mitochondrial damage in the in vitro model. In vivo experiments showed that rats treated with an NRF2 agonist had higher adenosine triphosphate (ATP) levels, lower blood urea nitrogen and creatinine levels, fewer renal histopathological changes, and higher expression of mitophagy-related proteins [PTEN-induced putative kinase 1 (PINK1), parkin RBR E3 ubiquitin protein ligase (PRKN), microtubule-associated protein 1 light chain 3 II (LC3 II)] and mitochondrial biogenesis-related proteins [peroxisome proliferator-activated receptor γ coactivator-1 (PGC-1α) and mitochondrial transcription factor A (TFAM)]. Electron microscopy of kidney tissues showed that mitochondrial damage was alleviated by treatment with an NRF2 agonist, and the opposite response occurred upon treatment with an NRF2 antagonist. Overall, our findings suggest that mitochondria have an important role in the pathogenesis of S-AKI, and that NRF2 activation restored mitochondrial homeostasis and function in the presence of this disease. This mitochondrial pathway has the potential to be a novel therapeutic target for the treatment of S-AKI.
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- 2022
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5. The Changes in Bacterial Microbiome Associated with Immune Disorder in Allergic Respiratory Disease
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Juanjuan Lyu, Fangfang Kou, Xiangyu Men, Yinhui Liu, Li Tang, and Shu Wen
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allergic rhinitis ,asthma ,chronic rhinosinusitis ,immune disorder ,bacterial microbiome ,Biology (General) ,QH301-705.5 - Abstract
Allergic respiratory disease is a worldwide and increasingly prevalent health problem. Many researchers have identified complex changes in the microbiota of the respiratory and intestinal tracts in patients with allergic respiratory diseases. These affect immune response and influence the progression of disease. However, the diversity of bacterial changes in such cases make it difficult to identify a specific microorganism to target for adjustment. Recent research evidence suggests that common bacterial variations present in allergic respiratory disease are associated with immune disorders. This finding could lead to the discovery of potential therapeutic targets in cases of allergic respiratory disease. In this review, we summarize current knowledge of bacteria changes in cases of allergic respiratory disease, to identify changes commonly associated with immune disorders, and thus provide a theoretical basis for targeting therapies of allergic respiratory disease through effective modulation of key bacteria.
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- 2022
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6. Experimental treatments for mitochondrial dysfunction in sepsis: A narrative review
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Guilang Zheng, Juanjuan Lyu, Jingda Huang, Dan Xiang, Meiyan Xie, and Qiyi Zeng
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Mitochondria ,mitochondrial dysfunction ,sepsis ,drug ,Medicine - Abstract
Sepsis is a systemic inflammatory response to infection. Sepsis, which can lead to severe sepsis, septic shock, and multiple organ dysfunction syndrome, is an important cause of mortality. Pathogenesis is extremely complex. In recent years, cell hypoxia caused by mitochondrial dysfunction has become a hot research field. Sepsis damages the structure and function of mitochondria, conversely, mitochondrial dysfunction aggravated sepsis. The treatment of sepsis lacks effective specific drugs. The aim of this paper is to undertake a narrative review of the current experimental treatment for mitochondrial dysfunction in sepsis. The search was conducted in PubMed databases and Web of Science databases from 1950 to January 2014. A total of 1,090 references were retrieved by the search, of which 121 researches met all the inclusion criteria were included. Articles on the relationship between sepsis and mitochondria, and drugs used for mitochondrial dysfunction in sepsis were reviewed retrospectively. The drugs were divided into four categories: (1) Drug related to mitochondrial matrix and respiratory chain, (2) drugs of mitochondrial antioxidant and free radical scavengers, (3) drugs related to mitochondrial membrane stability, (4) hormone therapy for septic mitochondria. In animal experiments, many drugs show good results. However, clinical research lacks. In future studies, the urgent need is to develop promising drugs in clinical trials.
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- 2015
7. Silencing mouse circular RNA circSlc8a1 by circular antisense cA-circSlc8a1 induces cardiac hepatopathy
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Nan Wu, Feiya Li, Weining Yang, William W. Du, Faryal Mehwish Awan, Chao Zhang, Juanjuan Lyu, Sema Misir, Kaixuan Zeng, Esra Eshaghi, and Burton B. Yang
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Pharmacology ,Drug Discovery ,Genetics ,Molecular Medicine ,Molecular Biology - Abstract
Circular RNAs (circRNAs) are a group of non-coding RNAs with a unique circular structure generated by back-splicing. It is acknowledged that circRNAs play critical roles in cardiovascular diseases. However, functional studies of circRNAs were impeded due to lack of effective in vivo silencing approaches. Since most circRNAs are produced by protein-coding transcripts, gene editing typically affects the coding activity of the parental genes. In this study, we developed a circular antisense RNA (cA-circSlc8a1) that could silence the highly expressed circRNA circSlc8a1 in the mouse heart but not its parental Slc8a1 linear mRNA. Transgenic cA-circSlc8a1 mice developed congestive heart failure resulting in a significant increase in the body weight secondary to peripheral edema and congestive hepatopathy. To further test the role of circSlc8a1, we generated transgenic mice overexpressing circSlc8a1 and observed a protective effect of circSlc8a1 in a pressure overload model. Mechanistically, we found that circSlc8a1 translocated into mitochondria to drive ATP synthesis. While establishing a transgenic murine model for antisense-mediated circRNA silencing without interfering with the parental linear RNA, our finding revealed the essential role of circSlc8a1 in maintaining heart function and may lay the groundwork of using the circular antisense RNA as a potential gene therapy approach for cardiovascular diseases.
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- 2022
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8. An antisense circular RNA circSCRIB enhances cancer progression by suppressing parental gene splicing and translation
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Nan Wu, Albert Yee, Ling Fang, Jian Ma, Burton B. Yang, Kaixuan Zeng, William W. Du, and Juanjuan Lyu
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SCRIB ,RNA Splicing ,Down-Regulation ,Breast Neoplasms ,Biology ,03 medical and health sciences ,Exon ,0302 clinical medicine ,Cell Movement ,Circular RNA ,Cell Line, Tumor ,Drug Discovery ,Genetics ,Humans ,RNA, Antisense ,Molecular Biology ,Cell Proliferation ,030304 developmental biology ,Pharmacology ,0303 health sciences ,Messenger RNA ,Sequence Analysis, RNA ,Gene Expression Profiling ,Tumor Suppressor Proteins ,Intron ,High-Throughput Nucleotide Sequencing ,Membrane Proteins ,RNA, Circular ,Cell biology ,Gene Expression Regulation, Neoplastic ,Antisense Orientation ,030220 oncology & carcinogenesis ,RNA splicing ,Molecular Medicine ,Original Article ,Female ,Precursor mRNA - Abstract
Circular RNAs (circRNAs) represent a large group of non-coding RNAs that are widely detected in mammalian cells. Although most circRNAs are generated in a sense orientation, there is a group of circRNAs that are synthesized in an antisense orientation. High-throughput analysis of breast cancer specimens revealed a significant enrichment of 209 antisense circRNAs. The tumor suppressor SCRIB was shown to potentially produce thirteen circRNAs, three of which are in an antisense orientation. Among these three circRNAs, circSCRIB (hsa_circ_0001831) was the most enriched in the breast cancer panel. This antisense SCRIB circRNA was shown to span one intron and two exons. We hypothesized that this circRNA could decrease pre-mRNA splicing and mRNA translation. To test this, we generated a hsa_circ_0001831 expression construct. We found that there was decreased SCRIB mRNA production but increased cancer cell proliferation, migration, and invasion. In comparison, an exonic sequence construct did not affect mRNA splicing but decreased protein translation, leading to increased E-cadherin expression and decreased expression of N-cadherin and vimentin. Thus, there was increased cell migration, invasion, proliferation, colony formation, and tumorigenesis. Our study suggests a novel modulatory role of antisense circRNAs on their parental transcripts. This may represent a promising approach for developing circRNA-directed therapy.
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- 2021
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9. A Neuroligin Isoform Translated by circNlgn Contributes to Cardiac Remodeling
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Le Zhou, Nan Wu, Chi Zhou, Alina T He, Juanjuan Lyu, Xiangmin Li, Weining Yang, Kevin Y Du, Feiya Li, Jindong Xu, Sheng Wang, Katarina Maksimovic, Jian Ma, William W. Du, Chao Zhang, Burton B. Yang, and Kaixuan Zeng
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0301 basic medicine ,Gene isoform ,Physiology ,Cell Adhesion Molecules, Neuronal ,Neuroligin ,Protein Serine-Threonine Kinases ,030204 cardiovascular system & hematology ,Biology ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Ventricular Dysfunction ,medicine ,Animals ,Humans ,Protein Isoforms ,Myocytes, Cardiac ,Myofibroblasts ,Cells, Cultured ,Ventricular Remodeling ,Tumor Suppressor Proteins ,RNA, Circular ,medicine.disease ,Fibrosis ,Cell biology ,030104 developmental biology ,Heart failure ,Collagen ,Carrier Proteins ,Cardiology and Cardiovascular Medicine ,Protein Binding - Abstract
Background: Fibrotic cardiac remodeling is a maladaptive response to acute or chronic injury that leads to arrhythmia and progressive heart failure. The underlying mechanisms remain unclear. We performed high-throughput RNA sequencing to analyze circular RNA profile in human cardiac disease and developed transgenic mice to explore the roles of circNlgn. Methods and Results: Using RNA sequencing, we found that circular neuroligin RNA (circNlgn) was highly upregulated in myocardial tissues of patients with selected congenital heart defects with cardiac overload. Back-splicing of the neuroligin gene led to the translation of a circular RNA–derived peptide (Nlgn173) with a 9-amino-acid nuclear localization motif. Binding of this motif to the structural protein LaminB1 facilitated the nuclear localization of Nlgn173. CHIP analysis demonstrated subsequent binding of Nlgn173 to both ING4 (inhibitor of growth protein 4) and C8orf44-SGK3 (serum and glucocorticoid-inducible kinase-3) promoters, resulting in aberrant collagen deposition, cardiac fibroblast proliferation, and reduced cardiomyocyte viability. Three-dimensional ultrasound imaging of circNlgn-transgenic mice showed impaired left ventricular function, with further impairment when subjected to left ventricular pressure overload compared with WT (wild type) mice. Nuclear translocation of Nlgn173, dysregulated expression of ING4 and C8orf44-SGK3, and immunohistochemical markers of cardiac fibrosis were detected in a panel of 145 patient specimens. Phenotypic changes observed in left ventricular pressure overload and transgenic mice were abrogated with silencing of circNlgn or its targets ING4 and SGK3. Conclusions: We show that a circular RNA can be translated into a novel protein isoform. Dysregulation of this process contributes to fibrosis and heart failure in cardiac overload–induced remodeling. This mechanism may hold therapeutic implications for cardiac disease.
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- 2021
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10. Lack of Macrophage Migration Inhibitory Factor Reduces Susceptibility to Ventricular Arrhythmias During the Acute Phase of Myocardial Infarction
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Qian Lei, Jia Huang, Tao Yu, Jin Wu, Juanjuan Lyu, and Xin-Chuan Wei
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0301 basic medicine ,medicine.medical_specialty ,inflammatory mediators ,Immunology ,Connexin ,03 medical and health sciences ,0302 clinical medicine ,In vivo ,Internal medicine ,medicine ,Immunology and Allergy ,Macrophage ,Myocardial infarction ,sympathetic nerve ,Original Research ,business.industry ,ventricular arrhythmias ,medicine.disease ,030104 developmental biology ,Endocrinology ,myocardial infarction ,030220 oncology & carcinogenesis ,macrophage migration inhibitory factor ,Macrophage migration inhibitory factor ,Tumor necrosis factor alpha ,Myocardial fibrosis ,Journal of Inflammation Research ,business ,Ex vivo - Abstract
Juanjuan Lyu,1 Jia Huang,2,3 Jin Wu,1 Tao Yu,3,4 Xinchuan Wei,2,3 Qian Lei2,3 1Department of Pediatrics, West China Second University Hospital, Sichuan University, Chengdu, 610041, People’s Republic of China; 2Department of Anesthesiology, Sichuan Provincial People’s Hospital, University of Electronic Science and Technology of China, Chengdu, 610072, People’s Republic of China; 3Chinese Academy of Sciences Sichuan Translational Medicine Research Hospital, Chengdu, 610072, People’s Republic of China; 4Department of Cardiac Surgery, Sichuan Provincial People’s Hospital, University of Electronic Science and Technology of China, Chengdu, 610072, People’s Republic of ChinaCorrespondence: Qian Lei Email leiqianggh@163.comBackground: Macrophages are involved in inflammatory responses and play a crucial role in aggravating ventricular arrhythmias (VAs) after myocardial infarction (MI). Macrophage migration inhibitory factor (MIF) participates in inflammatory responses during acute MI. In the present study, we hypothesized that knockout (KO) of MIF may prevent VAs during the acute phase of MI by inhibiting macrophage-derived pro-inflammatory mediators.Methods and Results: We demonstrated that MIF-KO mice in a mouse model of MI exhibited a significant decrease in susceptibility to VAs both in vivo (84.6% vs 40.7%, P < 0.05) and ex vivo (86.7% vs 40.0%, P < 0.05) at day 3 after MI compared with that in wild-type (WT) mice. Both WT and MIF-KO mice presented similar left ventricular contractility, peri-infarct myocardial fibrosis and sympathetic reinnervation, and circulating and local norepinephrine levels during the acute phase of MI. Meanwhile, MIF-KO mice had inhibited macrophage aggregation, alleviated connexin 43 (Cx43) redistribution, and reduced level of pro-inflammatory mediators, including tumor necrosis factor-α and interleukin-1β (P < 0.05) at day 3 after MI. The differences in susceptibility to VAs, expression of pro-inflammatory mediators, and Cx43 redistribution after MI between WT and MIF-KO mice disappeared by macrophage depletion with clodronate liposomes in both groups. Furthermore, the pro-inflammatory activity of cultured peritoneal macrophages was inhibited by MIF deficiency and recovered with replenishment of exogenous MIF in vitro.Conclusion: In conclusion, we found that lack of MIF reduced the susceptibility to VAs in mouse heart during the acute phase of MI by inhibiting pro-inflammatory activity of macrophages and improving gap-junction and electrical remodeling.Keywords: myocardial infarction, ventricular arrhythmias, macrophage migration inhibitory factor, inflammatory mediators, sympathetic nerve
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- 2021
11. Graves’ Disease in Children Presenting With Fragility Fracture: A Case Report.
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Chuanjie Yuan, JuanJuan Lyu, Yin Liu, Xiaomei Sun, and Jin Wu
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HYPERTHYROIDISM , *BONE density , *BONE metabolism , *FRAGILITY (Psychology) , *OSTEOPOROSIS - Abstract
Background • Adults with hyperthyroidism have been found to have decreased bone mineral density (BMD) and higher fracture risk. The most typical cause of hyperthyroidism is Graves’ disease. However, there are limited studies on how hyperthyroidism affects bone metabolism and fractures in children. We describe a unique instance of a patient who initially displayed a fragility fracture and was ultimately identified with Graves’ disease after biochemical evaluations. Case Summary • A 2-year-8-month-old female presented with fragility fractures three times in only 7 months. A series of examinations were performed to evaluate any possible malformations or abnormalities of bone metabolism. Graves’ disease was found, and drug therapies were employed (methimazole, propranolol, calcium carbonate, vitamin D). Since children with Graves’ disease and fragility fractures have been uncommonly described in the past, a stringent and thorough long-term follow-up was initiated. Conclusions • Children with undiagnosed Graves’ disease had a higher risk of fractures and osteoporosis. This case suggests that BMD measurement may be necessary for the initial evaluation of Graves’ disease in children. [ABSTRACT FROM AUTHOR]
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- 2023
12. An Improved Model for Circular RNA Overexpression: Using the Actin Intron Reveals High Circularization Efficiency
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Feiya Li, Juanjuan Lyu, Yang Yang, Qiwei Yang, Cristian Santos, and Burton B. Yang
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Genetics ,Molecular Biology ,Biochemistry - Published
- 2022
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13. Translation of yes-associated protein (YAP) was antagonized by its circular RNA via suppressing the assembly of the translation initiation machinery
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Alina He, Kevin Y Du, Kaixuan Zeng, Esra Eshaghi, William W. Du, Chao Zhang, Burton B. Yang, Ling Fang, Nan Wu, Juanjuan Lyu, Zhidong Yuan, and Jian Ma
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Melanoma, Experimental ,Breast Neoplasms ,Cell Cycle Proteins ,Transfection ,Translocation, Genetic ,Article ,Mice ,chemistry.chemical_compound ,Eukaryotic translation ,Circular RNA ,Cell Line, Tumor ,Protein biosynthesis ,Animals ,Humans ,Molecular Biology ,Adaptor Proteins, Signal Transducing ,Messenger RNA ,Hippo signaling pathway ,EIF4G ,RNA ,YAP-Signaling Proteins ,Translation (biology) ,Hep G2 Cells ,RNA, Circular ,Cell Biology ,Cell biology ,chemistry ,Protein Biosynthesis ,Gene expression ,Eukaryotic Initiation Factor-4G ,Transcription Factors - Abstract
Yap is the key component of Hippo pathway which plays crucial roles in tumorigenesis. Inhibition of Yap activity could promote apoptosis, suppress proliferation, and restrain metastasis of cancer cells. However, how Yap is regulated is not fully understood. Here, we reported Yap being negatively regulated by its circular RNA (circYap) through the suppression of the assembly of Yap translation initiation machinery. Overexpression of circYap in cancer cells significantly decreased Yap protein but did not affect its mRNA levels. As a consequence, it remarkably suppressed proliferation, migration and colony formation of the cells. We found that circYap could bind with Yap mRNA and the translation initiation associated proteins, eIF4G and PABP. The complex containing overexpressed circYap abolished the interaction of PABP on the poly(A) tail with eIF4G on the 5′-cap of the Yap mRNA, which functionally led to the suppression of Yap translation initiation. Individually blocking the binding sites of circYap on Yap mRNA or respectively mutating the binding sites for PABP and eIF4G derepressed Yap translation. Significantly, breast cancer tissue from patients in the study manifested dysregulation of circYap expression. Collectively, our study uncovered a novel molecular mechanism in the regulation of Yap and implicated a new function of circular RNA, supporting the pursuit of circYap as a potential tool for future cancer intervention.
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- 2019
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14. Segmental maternal uniparental disomy of chromosome 7q in a patient with congenital chloride diarrhea
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Li Ye, Xiaomei Sun, Ying Liu, Juanjuan Lyu, Zhuo Huang, Dan Yu, Chuanjie Yuan, Jin Wu, and Hongbo Chen
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Diarrhea ,Male ,0301 basic medicine ,Microbiology (medical) ,Proband ,mUPD ,Pediatrics ,medicine.medical_specialty ,Congenital chloride diarrhea ,Clinical Biochemistry ,Hypochloremia ,SLC26A3 ,Silver–Russell syndrome ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,medicine ,Humans ,Immunology and Allergy ,Chloride-Bicarbonate Antiporters ,Allele ,Imprinting (psychology) ,Research Articles ,Sanger sequencing ,Base Sequence ,biology ,business.industry ,Biochemistry (medical) ,Infant, Newborn ,Public Health, Environmental and Occupational Health ,Hematology ,Uniparental Disomy ,medicine.disease ,Pedigree ,Silver-Russell Syndrome ,Medical Laboratory Technology ,030104 developmental biology ,Sulfate Transporters ,030220 oncology & carcinogenesis ,symbols ,biology.protein ,Female ,business ,Chromosomes, Human, Pair 7 ,Metabolism, Inborn Errors ,Research Article - Abstract
Background The main symptoms of congenital chloride diarrhea (CCD) main symptoms are watery diarrhea, hypochloremia, and hypokalemic metabolic alkalosis. Silver–Russell syndrome (SRS) is a heterogeneous imprinting disorder characterized by severe intrauterine retardation, poor postnatal growth, and facial dysmorphism. Methods Parent‐offspring trio whole‐exome sequencing was used to identify the causal variants. Sequencing reads were mapped to the reference of human genome version hg19. Sanger sequencing was performed as a confirmatory experiment. Results The proband was a patient with SRS caused by maternal uniparental disomy 7. The CCD of the proband was caused by homozygous variant c.1515–1 (IVS13) G>A; both mutated alleles were inherited from her mother. Conclusion We report the first clinical case of CCD and SRS occurring together. Patients with milder phenotypes may be difficult to diagnose in early stage, but close monitoring of potential complications is important for identification., We report the first case of a female child presenting with CCD accompanied by maternal segmental UPD of chromosome 7 confirmed by molecular diagnosis. The proband was the only patient in the family and harbored a SLC26A3 variant (NM_000111.3:c.1515‐1G>A). The mother of the patient was heterozygous, whereas the father was wild‐type. After treatment of CCD, the patient still failed to thrive and had a typical dysmorphic feature. In the second genetic analysis, we found that at least 86.51 Mb of genome 7q11q36 (chr7: 65446986–151960086) was maternal uniparental disomy. We revised the diagnosis to CCD combined with SRS.
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- 2021
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15. Enhanced breast cancer progression by mutant p53 is inhibited by the circular RNA circ-Ccnb1
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Chun Peng, Bing L. Yang, Albert Yee, Feiya Li, Faryal Mehwish Awan, Jian Ma, Chengyan He, Nan Wu, Weining Yang, William W. Du, Ling Fang, Chao Zhang, Alina He, Yat Sze Sheila Kwok, Juanjuan Lyu, Jun Dong, Helen Mackay, and Burton B. Yang
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Proteomics ,0301 basic medicine ,Programmed cell death ,Cell Survival ,Mutant ,Mice, Nude ,Breast Neoplasms ,medicine.disease_cause ,Article ,Mice ,03 medical and health sciences ,Circular RNA ,medicine ,Animals ,Humans ,Molecular Biology ,Cell Proliferation ,Mutation ,Binding Sites ,Microarray analysis techniques ,Chemistry ,HEK 293 cells ,Mammary Neoplasms, Experimental ,Cell Biology ,3. Good health ,Cell biology ,Molecular Docking Simulation ,HEK293 Cells ,030104 developmental biology ,Disease Progression ,Nucleic Acid Conformation ,RNA ,Female ,Tumor Suppressor Protein p53 ,Injections, Intraperitoneal ,Function (biology) - Abstract
TP53 mutations occur in many different types of cancers that produce mutant p53 proteins. The mutant p53 proteins have lost wild-type p53 activity and gained new functions that contribute to malignant tumor progression. Different p53 mutations create distinct profiles in loss of wild-type p53 activity and gain of functions. Targeting the consequences generated by the great number of p53 mutations would be extremely complex. Therefore, in this study we used a workaround and took advantage of the fact that mutant p53 cannot bind H2AX. Using this, we developed a new approach to repress the acquisition of mutant p53 functions. We show here that the delivery of a circular RNA circ-Ccnb1 inhibited the function of three p53 mutations. By microarray analysis and real-time PCR, we detected decreased circ-Ccnb1 expression levels in patients bearing breast carcinoma. Ectopic delivery of circ-Ccnb1 inhibited tumor growth and extended mouse viability. Using proteomics, we found that circ-Ccnb1 precipitated p53 in p53 wild-type cells, but instead precipitated Bclaf1 in p53 mutant cells. Further experiments showed that H2AX serves as a bridge, linking the interaction of circ-Ccnb1 and wild-type p53, thus allowing Bclaf1 to bind Bcl2 resulting in cell survival. In the p53 mutant cells, circ-Ccnb1 formed a complex with H2AX and Bclaf1, resulting in the induction of cell death. We found that this occurred in three p53 mutations. These results shed light on the possible development of new approaches to inhibit the malignancy of p53 mutations.
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- 2018
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16. The Circular RNA Interacts with STAT3, Increasing Its Nuclear Translocation and Wound Repair by Modulating Dnmt3a and miR-17 Function
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Faryal Mehwish Awan, Zhenguo Yang, De Wu, Shaan Gupta, Burton B. Yang, Weining Yang, Juanjuan Lyu, Yan Zeng, and William W. Du
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Models, Molecular ,STAT3 Transcription Factor ,0301 basic medicine ,Molecular Conformation ,Biology ,Transfection ,RNA Transport ,DNA Methyltransferase 3A ,Mice ,03 medical and health sciences ,Cell Movement ,Circular RNA ,Transcription (biology) ,Drug Discovery ,microRNA ,Genetics ,medicine ,Animals ,DNA (Cytosine-5-)-Methyltransferases ,Cell adhesion ,STAT3 ,Angiopoietin-Like Protein 1 ,Molecular Biology ,Cell Proliferation ,Pharmacology ,Wound Healing ,Binding Sites ,Membrane Proteins ,RNA, Circular ,Fibroblasts ,3. Good health ,Fibronectin ,MicroRNAs ,030104 developmental biology ,medicine.anatomical_structure ,Gene Expression Regulation ,embryonic structures ,Cancer research ,biology.protein ,RNA ,Molecular Medicine ,Original Article ,Wound healing ,Nucleus ,Protein Binding - Abstract
Delayed or impaired wound healing is a major health issue worldwide, especially in patients with diabetes and atherosclerosis. Here we show that expression of the circular RNA circ-Amotl1 accelerated healing process in a mouse excisional wound model. Further studies showed that ectopic circ-Amotl1 increased protein levels of Stat3 and Dnmt3a. The increased Dnmt3a then methylated the promoter of microRNA miR-17, decreasing miR-17-5p levels but increasing fibronectin expression. We found that Stat3, similar to Dnmt3a and fibronectin, was a target of miR-17-5p. Decreased miR-17-5p levels would increase expression of fibronectin, Dnmt3a, and Stat3. All of these led to increased cell adhesion, migration, proliferation, survival, and wound repair. Furthermore, we found that circ-Amotl1 not only increased Stat3 expression but also facilitated Stat3 nuclear translocation. Thus, the ectopic expressed circ-Amotl1 and Stat3 were mainly translocated to nucleus. In the presence of circ-Amotl1, Stat3 interacted with Dnmt3a promoter with increased affinity, facilitating Dnmt3a transcription. Ectopic application of circ-Amotl1 accelerating wound repair may shed light on skin wound healing clinically.
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- 2017
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17. UCP2 silencing aggravates mitochondrial dysfunction in astrocytes under septic conditions
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Yijun Zheng, Juanjuan Lyu, Wanwan Peng, Qiyi Zeng, Jinda Huang, Sitao Li, Junliang Zhang, and Yue Ding
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UCP2 ,Lipopolysaccharides ,0301 basic medicine ,Cancer Research ,Mitochondrion ,Biochemistry ,Neuroprotection ,Rats, Sprague-Dawley ,Sepsis ,03 medical and health sciences ,0302 clinical medicine ,mitochondrial dysfunction ,Genetics ,medicine ,Animals ,Uncoupling Protein 2 ,Gene Silencing ,RNA, Messenger ,Molecular Biology ,sepsis-associated encephalopathy ,reactive oxygen species ,Gene knockdown ,Chemistry ,Interleukin ,Articles ,medicine.disease ,Mitochondria ,Rats ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Oncology ,Apoptosis ,Astrocytes ,Gene Knockdown Techniques ,030220 oncology & carcinogenesis ,Cytokines ,Molecular Medicine ,Tumor necrosis factor alpha ,Astrocyte - Abstract
Uncoupling protein 2 (UCP2) plays a positive role in sepsis. However, the role of UCP2 in experimental sepsis in astrocytes remains unknown. The present study was designed to determine whether UCP2 has a protective effect in an experimental sepsis model in astrocytes asnd to clarify the mechanisms responsible for its neuroprotective effects after sepsis. An experimental astrocyte model mimicking sepsis-induced brain injury was established using lipopolysaccharide (LPS) and interferon (IFN)-γ. Additionally, UCP2 knockdown in astrocytes was achieved by adenovirus transfection. Tumor necrosis factor (TNF)-α and interleukin (IL)-1β activity, mitochondrial membrane potential (MMP) and reactive oxygen species (ROS), and adenosine triphosphate (ATP) levels were assessed. The mitochondrial ultrastructure was evaluated, and the expression of UCP2 was determined by western blotting. LPS with IFN-γ co-stimulation increased the mRNA and protein expression levels of UCP2 in astrocytes, damaged the mitochondrial structure, and accelerated the release of TNF-α and IL-1β, resulting in a decrease in the MMP, and the excessive generation of ROS. Moreover, sepsis also caused a reduction in ATP production. The knockdown of UCP2 exacerbated astrocyte injury and mitochondrial impairment. In conclusion, both the function and morphology of mitochondria were damaged in an experimental model of sepsis in astrocytes, and knockdown of UCP2 using shRNA exacerbated this impairment, suggesting that UCP2 has a positive effect on astrocytes as determined in an experimental sepsis model.
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- 2019
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18. Upregulation of UCP2 Expression Protects against LPS-Induced Oxidative Stress and Apoptosis in Cardiomyocytes
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Junliang Zhang, Qiyi Zeng, Yu Yao, Hu Hao, Yijun Zheng, Sitao Li, Juanjuan Lyu, Jinda Huang, Yue Ding, and Wanwan Peng
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Lipopolysaccharides ,0301 basic medicine ,Aging ,Article Subject ,p38 mitogen-activated protein kinases ,Blotting, Western ,Apoptosis ,medicine.disease_cause ,Biochemistry ,Superoxide dismutase ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Microscopy, Electron, Transmission ,Downregulation and upregulation ,Malondialdehyde ,medicine ,Animals ,Myocytes, Cardiac ,Uncoupling Protein 2 ,lcsh:QH573-671 ,Protein kinase A ,Cells, Cultured ,Membrane Potential, Mitochondrial ,chemistry.chemical_classification ,Reactive oxygen species ,L-Lactate Dehydrogenase ,biology ,Caspase 3 ,Superoxide Dismutase ,lcsh:Cytology ,Cell Biology ,General Medicine ,Rats ,Up-Regulation ,Cell biology ,Oxidative Stress ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,biology.protein ,Reactive Oxygen Species ,Oxidative stress ,Research Article ,Signal Transduction - Abstract
Uncoupling protein 2 (UCP2) has a cardioprotective role under septic conditions, but the underlying mechanism remains unclear. This study aimed at investigating the effects of UCP2 on the oxidative stress and apoptosis of cardiomyocytes induced by lipopolysaccharide (LPS). First, LPS increased UCP2 expression in cardiomyocytes in a time-dependent manner. LPS increased the production of lactate dehydrogenase (LDH), reactive oxygen species (ROS), and malondialdehyde (MDA) and decreased the level of superoxide dismutase (SOD). However, UCP2 knockdown increased the LPS-induced cardiac injury and oxidative stress. In addition, LPS damaged the mitochondrial ultrastructure and led to the disruption of mitochondrial membrane potential (MMP), as well as the release of mitochondrial cytochrome c. UCP2 knockdown aggravated mitochondrial injury and the release of mitochondrial cytochrome c. LPS increased the protein levels of Bax and cleaved-caspase-3, decreased the protein level of Bcl-2, and upregulated the protein level of mitogen-activated protein kinase. However, upon UCP2 knockdown, the protein levels of Bax and cleaved-caspase-3 increased even further, and the protein level of Bcl-2 was further decreased. The protein level of phosphorylated p38 was also further enhanced. Thus, UCP2 protects against LPS-induced oxidative stress and apoptosis in cardiomyocytes.
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- 2019
19. A Neuroligin Isoform Translated by circNlgn Contributes to Cardiac Remodeling.
- Author
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Du, William W., Jindong Xu, Weining Yang, Nan Wu, Feiya Li, Le Zhou, Sheng Wang, Xiangmin Li, He, Alina T., Du, Kevin Y., Kaixuan Zeng, Jian Ma, Juanjuan Lyu, Chao Zhang, Chi Zhou, Maksimovic, Katarina, and Yang, Burton B.
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- 2021
- Full Text
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20. A circular RNA circ-DNMT1 enhances breast cancer progression by activating autophagy
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Faryal Mehwish Awan, Jian Ma, Sergey N. Krylov, Chunqi Gao, Nan Wu, Chengyan He, Yaou Zhang, Chun Peng, Steven Hibberd, Xiangmin Li, Jun Dong, Weining Yang, Chao Zhang, Juanjuan Lyu, Ling Fang, Mouna Sdiri, Burton B. Yang, Yizhen Xie, Feiya Li, Zhenguo Yang, and William W. Du
- Subjects
0301 basic medicine ,DNA (Cytosine-5-)-Methyltransferase 1 ,Cancer Research ,Active Transport, Cell Nucleus ,Mice, Nude ,Breast Neoplasms ,Biology ,environment and public health ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Transcription (biology) ,Circular RNA ,Cell Line, Tumor ,Genetics ,medicine ,Autophagy ,Gene silencing ,Animals ,Humans ,Heterogeneous Nuclear Ribonucleoprotein D0 ,Heterogeneous-Nuclear Ribonucleoprotein D ,Molecular Biology ,Cellular Senescence ,urogenital system ,Cell growth ,RNA ,RNA, Circular ,Xenograft Model Antitumor Assays ,Cell biology ,Cell nucleus ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,embryonic structures ,DNMT1 ,Disease Progression ,Female ,Tumor Suppressor Protein p53 - Abstract
Circular RNAs are a large group of noncoding RNAs that are widely expressed in mammalian cells. Genome-wide analyses have revealed abundant and evolutionarily conserved circular RNAs across species, which suggest specific physiological roles of these species. Using a microarray approach, we detected increased expression of a circular RNA circ-Dnmt1 in eight breast cancer cell lines and in patients with breast carcinoma. Silencing circ-Dnmt1 inhibited cell proliferation and survival. Ectopic circ-Dnmt1 increased the proliferative and survival capacities of breast cancer cells by stimulating cellular autophagy. We found that circ-Dnmt1-mediated autophagy was essential in inhibiting cellular senescence and increasing tumor xenograft growth. We further found that ectopically expressed circ-Dnmt1 could interact with both p53 and AUF1, promoting the nuclear translocation of both proteins. Nuclear translocation of p53 induced cellular autophagy while AUF1 nuclear translocation reduced Dnmt1 mRNA instability, resulting in increased Dnmt1 translation. From here, functional Dnmt1 could then translocate into the nucleus, inhibiting p53 transcription. Computational algorithms revealed that both p53 and AUF1 could bind to different regions of circ-Dnmt1 RNA. Our results showed that the highly expressed circular RNA circ-Dnmt1 could bind to and regulate oncogenic proteins in breast cancer cells. Thus circ-Dnmt1 appears to be an oncogenic circular RNA with potential for further preclinical research.
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- 2018
21. Sepsis-induced brain mitochondrial dysfunction is associated with altered mitochondrial Src and PTP1B levels
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Bin Wang, Juanjuan Lyu, Cui Liu, Dan Xiang, Shaohua Tao, Guilang Zheng, Zhijiang Chen, Jinda Huang, Meiyan Xie, and Qiyi Zeng
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Lipopolysaccharides ,Male ,medicine.medical_specialty ,Lipopolysaccharide ,Oxidative phosphorylation ,Biology ,Pathogenesis ,Sepsis ,chemistry.chemical_compound ,Internal medicine ,medicine ,Animals ,RNA, Messenger ,Phosphorylation ,Rats, Wistar ,Molecular Biology ,Membrane Potential, Mitochondrial ,Protein Tyrosine Phosphatase, Non-Receptor Type 1 ,chemistry.chemical_classification ,Reactive oxygen species ,General Neuroscience ,Brain ,Tyrosine phosphorylation ,medicine.disease ,Mitochondria ,Disease Models, Animal ,src-Family Kinases ,Endocrinology ,chemistry ,Sepsis-Associated Encephalopathy ,Neurology (clinical) ,Reactive Oxygen Species ,Tyrosine kinase ,hormones, hormone substitutes, and hormone antagonists ,Developmental Biology ,Proto-oncogene tyrosine-protein kinase Src - Abstract
Sepsis-induced brain dysfunction (SIBD) is often the first manifestation of sepsis, and its pathogenesis is associated with mitochondrial dysfunction. In this study, we investigated the roles of the tyrosine kinase Src and protein tyrosine phosphatase 1B (PTP1B) in brain mitochondrial dysfunction using a rat model of lipopolysaccharide (LPS)-induced sepsis. We found that there was a gradual and significant increase of PTP1B levels in the rat brain after sepsis induction. In contrast, brain Src levels were reduced in parallel with the PTP1B increase. Sepsis led to significantly reduced tyrosine phosphorylation of mitochondrial oxidative phosphorylation (OXPHOS) complexes I, II and III. Pretreatment of mitochondrial proteins with active PTP1B significantly inhibited complexes I and III activities in vitro, whereas Src enhanced complexes I, II, and III activities. PTP1B and Src were each co-immunoprecipitated with OXPHOS complexes I and III, suggesting direct interactions between both proteins and complexes I and III. Src also directly interacted with complex II. Furthermore, pretreatment of mitochondrial proteins with active PTP1B resulted in overproduction of reactive oxygen species and decreased mitochondrial membrane potential. Pretreatment with active Src produced the opposite effect. These results suggest that brain mitochondrial dysfunction following LPS-induced sepsis in rats is partly attributed to PTP1B and Src mediated decrease in mitochondrial protein tyrosine phosphorylation.
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- 2015
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22. Silencing of uncoupling protein 2 by small interfering RNA aggravates mitochondrial dysfunction in cardiomyocytes under septic conditions
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Juanjuan Lyu, Dan Xiang, Guilang Zheng, Shu Liu, Jinda Huang, Qiyi Zeng, Cui Liu, and Meiyan Xie
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Lipopolysaccharides ,Mitochondrial DNA ,Small interfering RNA ,uncoupling protein 2 ,Lipopolysaccharide ,mito chondrial function ,Muscle Proteins ,mitochondrial DNA ,Mitochondrion ,Biology ,Ion Channels ,Mitochondria, Heart ,Cell Line ,Mitochondrial Proteins ,sepsis ,chemistry.chemical_compound ,mitochondrial membrane potential ,Genetics ,medicine ,Animals ,Myocytes, Cardiac ,RNA, Messenger ,RNA, Small Interfering ,Cell damage ,Membrane Potential, Mitochondrial ,reactive oxygen species ,Messenger RNA ,Articles ,General Medicine ,medicine.disease ,small interfering RNA ,Molecular biology ,Rats ,Cell biology ,chemistry ,Apoptosis ,Mitochondrial Membranes ,Tumor necrosis factor alpha ,H9C2 - Abstract
Uncoupling protein 2 (UCP2) regulates the production of mitochondrial reactive oxygen species (ROS) and cellular energy transduction under physiological or pathological conditions. In this study, we aimed to determine whether mitochondrial UCP2 plays a protective role in cardiomyocytes under septic conditions. In order to mimic the septic condition, rat embryonic cardiomyoblast-derived H9C2 cells were cultured in the presence of lipopolysaccharide (LPS) plus peptidoglycan G (PepG) and small interfering RNA (siRNA) against UCP2 (siUCP2) was used to suppress UCP2 expression. Reverse transcription quantitative-polymerase chain reaction (RT-qPCR), western blot analysis, transmission electron microscopy (TEM), confocal microscopy and flow cytometry (FCM) were used to detect the mRNA levels, protein levels, mitochondrial morphology and mitochondrial membrane potential (MMP or ΔΨm) in qualitative and quantitative analyses, respectively. Indicators of cell damage [lactate dehydrogenase (LDH), creatine kinase (CK), interleukin (IL)-6 and tumor necrosis factor (TNF)-α in the culture supernatant] and mitochondrial function [ROS, adenosine triphosphate (ATP) and mitochondrial DNA (mtDNA)] were detected. Sepsis enhanced the mRNA and protein expression of UCP2 in the H9C2 cells, damaged the mitochondrial ultrastructure, increased the forward scatter (FSC)/side scatter (SSC) ratio, increased the CK, LDH, TNF-α and IL-6 levels, and lead to the dissipation of MMP, as well as the overproduction of ROS; in addition, the induction of sepsis led to a decrease in ATP levels and the deletion of mtDNA. The silencing of UCP2 aggravated H9C2 cell damage and mitochondrial dysfunction. In conclusion, our data demonstrate that mitochondrial morphology and funtion are damaged in cardiomyocytes under septic conditions, while the silencing of UCP2 using siRNA aggravated this process, indicating that UCP2 may play a protective role in cardiomyocytes under septic conditions.
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- 2015
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23. Silencing of uncoupling protein 2 by small interfering RNA aggravates mitochondrial dysfunction in cardiomyocytes under septic conditions.
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GUILANG ZHENG, JUANJUAN LYU, SHU LIU, JINDA HUANG, CUI LIU, DAN XIANG, MEIYAN XIE, and QIYI ZENG
- Published
- 2015
- Full Text
- View/download PDF
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