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Abstract Identifying genomic markers for phosphate-solubilizing bacteria (PSB) is vital for advancing agricultural sustainability. This study utilizes whole-genome sequencing and comprehensive bioinformatics analysis, examining the genomes of 76 PSB strains with the aid of specialized genomic databases and analytical tools. We have identified the pqq gene cluster, particularly the pqqC gene, as a key marker for (P) solubilization capabilities. The pqqC gene encodes an enzyme that catalyzes the conversion of precursors to 2-keto-d-gluconic acid, which significantly enhances P solubilization in soil. This gene’s importance lies not only in its biochemical function but also in its prevalence and effectiveness across various PSB strains, distinguishing it from other potential markers. Our study focuses on Burkholderia cepacia 51-Y1415, known for its potent solubilization activity, and demonstrates a direct correlation between the abundance of the pqqC gene, the quantitative release of P, and the production of 2-keto-d-gluconic acid over a standard 144-h cultivation period under standardized conditions. This research not only underscores the role of the pqqC gene as a universal marker for the rapid screening and functional annotation of PSB strains but also highlights its implications for enhancing soil fertility and crop yields, thereby contributing to more sustainable agricultural practices. Our findings provide a foundation for future research aimed at developing targeted strategies to optimize phosphate solubilization, suggesting areas for further investigation such as the integration of these genomic insights into practical agricultural applications to maximize the effectiveness of PSB strains in real-world soil environments.

Abstract Background Woody bamboos are the only diverse large perennial grasses in mesic-wet forests and are widely distributed in the understory and canopy. The functional trait variations and trade-offs in this taxon remain unclear due to woody bamboo syndromes (represented by lignified culm of composed internodes and nodes). Here, we examined the effects of heritable legacy and occurrence site climates on functional trait variations in leaf and culm across 77 woody bamboo species in a common garden. We explored the trade-offs among leaf functional traits, the connection between leaf nitrogen (N), phosphorus (P) concentrations and functional niche traits, and the correlation of functional traits between leaves and culms. Results The Bayesian mixed models reveal that the combined effects of heritable legacy (phylogenetic distances and other evolutionary processes) and occurrence site climates accounted for 55.10–90.89% of the total variation among species for each studied trait. The standardized major axis analysis identified trade-offs among leaf functional traits in woody bamboo consistent with the global leaf economics spectrum; however, compared to non-bamboo species, the woody bamboo exhibited lower leaf mass per area but higher N, P concentrations and assimilation, dark respiration rates. The canonical correlation analysis demonstrated a positive correlation (ρ = 0.57, P-value

The effect of evolutionary history on wood density variation may play an important role in shaping variation in wood density, but this has largely not been tested. Using a comprehensive global dataset including 27,297 measurements of wood density from 2621 tree species worldwide, we test the hypothesis that the legacy of evolutionary history plays an important role in driving the variation of wood density among tree species. We assessed phylogenetic signal in different taxonomic (e.g., angiosperms and gymnosperms) and ecological (e.g., tropical, temperate, and boreal) groups of tree species, explored the biogeographical and phylogenetic patterns of wood density, and quantified the relative importance of current environmental factors (e.g., climatic and soil variables) and evolutionary history (i.e., phylogenetic relatedness among species and lineages) in driving global wood density variation. We found that wood density displayed a significant phylogenetic signal. Wood density differed among different biomes and climatic zones, with higher mean values of wood density in relatively drier regions (highest in subtropical desert). Our study revealed that at a global scale, for angiosperms and gymnosperms combined, phylogeny and species (representing the variance explained by taxonomy and not direct explained by long-term evolution process) explained 84.3% and 7.7% of total wood density variation, respectively, whereas current environment explained 2.7% of total wood density variation when phylogeny and species were taken into account. When angiosperms and gymnosperms were considered separately, the three proportions of explained variation are, respectively, 84.2%, 7.5% and 6.7% for angiosperms, and 45.7%, 21.3% and 18.6% for gymnosperms. Our study shows that evolutionary history outpaced current environmental factors in shaping global variation in wood density.

Abstract A central role for nature-based solution is to identify optimal management practices to address environmental challenges, including carbon sequestration and biodiversity conservation. Inorganic fertilization increases plant aboveground biomass but often causes a tradeoff with plant diversity loss. It remains unclear, however, whether organic fertilization, as a potential nature-based solution, could alter this tradeoff by increasing aboveground biomass without plant diversity loss. Here we compile data from 537 experiments on organic and inorganic fertilization across grasslands and croplands worldwide to evaluate the responses of aboveground biomass, plant diversity, and soil organic carbon (SOC). Both organic and inorganic fertilization increase aboveground biomass by 56% and 42% relative to ambient, respectively. However, only inorganic fertilization decreases plant diversity, while organic fertilization increases plant diversity in grasslands with greater soil water content. Moreover, organic fertilization increases SOC in grasslands by 19% and 15% relative to ambient and inorganic fertilization, respectively. The positive effect of organic fertilization on SOC increases with increasing mean annual temperature in grasslands, a pattern not observed in croplands. Collectively, our findings highlight organic fertilization as a potential nature-based solution that can increase two ecosystem services of grasslands, forage production, and soil carbon storage, without a tradeoff in plant diversity loss.

Abstract Background The availability of soil phosphorus (P) often limits the productivities of wet tropical lowland forests. Little is known, however, about the metabolomic profile of different chemical P compounds with potentially different uses and about the cycling of P and their variability across space under different tree species in highly diverse tropical rainforests. Results We hypothesised that the different strategies of the competing tree species to retranslocate, mineralise, mobilise, and take up P from the soil would promote distinct soil 31P profiles. We tested this hypothesis by performing a metabolomic analysis of the soils in two rainforests in French Guiana using 31P nuclear magnetic resonance (NMR). We analysed 31P NMR chemical shifts in soil solutions of model P compounds, including inorganic phosphates, orthophosphate mono- and diesters, phosphonates, and organic polyphosphates. The identity of the tree species (growing above the soil samples) explained > 53% of the total variance of the 31P NMR metabolomic profiles of the soils, suggesting species-specific ecological niches and/or species-specific interactions with the soil microbiome and soil trophic web structure and functionality determining the use and production of P compounds. Differences at regional and topographic levels also explained some part of the the total variance of the 31P NMR profiles, although less than the influence of the tree species. Multivariate analyses of soil 31P NMR metabolomics data indicated higher soil concentrations of P biomolecules involved in the active use of P (nucleic acids and molecules involved with energy and anabolism) in soils with lower concentrations of total soil P and higher concentrations of P-storing biomolecules in soils with higher concentrations of total P. Conclusions The results strongly suggest “niches” of soil P profiles associated with physical gradients, mostly topographic position, and with the specific distribution of species along this gradient, which is associated with species-specific strategies of soil P mineralisation, mobilisation, use, and uptake.

Understanding the invasion of moso bamboo (Phyllostachys edulis) into adjacent evergreen broadleaf forest based on functional traits is crucial due to its significant influence on ecosystem processes. However, existing research has primarily focused on above- or below-ground traits in isolation, lacking a comprehensive integration of both. In this study, we conducted a trait-based analysis including 23 leaf traits and 11 root traits in three forest types - bamboo forest, mixed bamboo and broadleaf forest, and evergreen broadleaf forest - to investigate trait differences, phenotypic integration, and above- and below-ground resource strategies in bamboo and broadleaf species. Our findings demonstrated significant differences in leaf and root key traits between bamboo and broadleaf species, strongly supporting the “phenotypic divergence hypothesis”. Bamboo exhibited stronger trait correlations compared to broadleaf species, indicating higher phenotypic integration. Above- and below-ground strategies were characterized by trade-offs rather than coordination, resulting in a multi-dimensional trait syndrome. Specifically, a unidimensional leaf economics spectrum revealed that bamboo with higher leaf N concentrations (LNC), P concentrations (LPC), and specific leaf area (SLA) adopted a “fast acquisitive” above-ground strategy, while broadleaf species with thicker leaves employed a “slow conservative” above-ground strategy. A two-dimensional root trait syndrome indicated a “conservation” gradient with bamboo adopting a “slow conservative” below-ground strategy associated with higher root tissue density (RTD), and broadleaf species exhibiting a “fast acquisitive” below-ground strategy linked to higher root N concentrations (RNC) and P concentrations (RPC), and a “collaboration” gradient probably ranging from broadleaf species with a “do-it-yourself” strategy characterized by high specific root length (SRL), to bamboo adopting an “outsourcing” strategy with thicker roots. In conclusion, key trait divergence from coexisting broadleaf species, higher phenotypic integration, and multi-dimensional opposite above- and below-ground resource strategies confer competitive advantages to moso bamboo, shedding light on the mechanistic understanding of its invasion into subtropical evergreen broadleaf forest and providing theoretical guidance for maintaining the stability of subtropical forest ecosystem.

We investigated the potential of ferric iron-modified biochar to lessen autotrophic nitrification and lower nitrous oxide (N2O) emissions in paddy soils. A 15N tracing incubation was conducted to investigate the changes in soil gross nitrogen (N) transformations under various biochar amendments (control, unmodified biochar, and Fe-modified biochar). Acetylene and 1-octyne were used to assess the relative contributions of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) to N2O emission from paddy soil. The Fe-modified biochar increased the rate of NH4+ immobilization by 26 % and 383 % compared to the control and unmodified biochar treatments, respectively. The gross rate of autotrophic nitrification was reduced to 5.43 μg N g−1 d−1 in the Fe-modified biochar treatment, compared to 6.74 μg N g−1 d−1 in the control treatment and 9.38 μg N g−1 d−1 in the unmodified biochar treatment. Soil pH had varying effects on N2O emissions involving AOB and AOA. The N2O yields of AOA were more sensitive to Fe-modified biochar applications. AOB, specifically the Nitrosopira-AOB genus, dominated N2O production in all treatments. Overall, this study suggests that Fe-modified biochar holds greater potential than unmodified biochar in reducing N2O emissions from paddy soils by stimulating NH4+ adsorption, restraining autotrophic nitrification rates, and AOB-dominant N2O production pathways.

Abstract The role of diverse soil microbiota in restoring erosion‐induced degraded lands is well recognized. Yet, the facilitative interactions among symbiotic arbuscular mycorrhizal (AM) fungi, rhizobia, and heterotrophic bacteria, which underpin multiple functions in eroded ecosystems, remain unclear. Here, we utilized quantitative microbiota profiling and ecological network analyses to explore the interplay between the diversity and biotic associations of root‐associated microbiota and multifunctionality across an eroded slope of a Robinia pseudoacacia plantation on the Loess Plateau. We found explicit variations in slope multifunctionality across different slope positions, associated with shifts in limiting resources, including soil phosphorus (P) and moisture. To cope with P limitation, AM fungi were recruited by R. pseudoacacia, assuming pivotal roles as keystones and connectors within cross‐kingdom networks. Furthermore, AM fungi facilitated the assembly and composition of bacterial and rhizobial communities, collectively driving slope multifunctionality. The symbiotic association among R. pseudoacacia, AM fungi, and rhizobia promoted slope multifunctionality through enhanced decomposition of recalcitrant compounds, improved P mineralization potential, and optimized microbial metabolism. Overall, our findings highlight the crucial role of AM fungal‐centered microbiota associated with R. pseudoacacia in functional delivery within eroded landscapes, providing valuable insights for the sustainable restoration of degraded ecosystems in erosion‐prone regions.

Perennial trees are often stressed by drought more than once during their life cycle. Our study exposed three-month-old Alhagisparsifolia, with (drought-primed) or without (nonprimed) prior drought stress to subsequent drought for two months, aiming to reveal whether pre-exposure to drought could enhance seedling resistance to subsequent drought and investigated possible underlying mechanisms. Root biomass, leaf relative water content, chlorophyll a, and carotenoids were significantly higher in drought-primed than nonprimed seedlings. They also had reduced concentrations of malondialdehyde, hydrogen peroxide (H2O2), and superoxide anions (O2•−), indicating relief from oxidative stress. This relief was associated with a coordinated upregulation of enzymes scavenging O2•−and H2O2, particularly superoxide dismutase (SOD) and catalase (CAT), and the maintenance of the ascorbate-glutathione (AsA-GSH) redox pool and enzymatic activities (ascorbate peroxidase, mono- and dehydroascorbate reductase, and glutathione reductase), leading to the better regulation of reactive oxygen species. The failure of nonprimed seedlings to upregulate the SOD, CAT, and AsA-GSH cycles nevertheless made the seedlings susceptible to oxidative stress. The increased levels of strigolactones, jasmonic acid, and abscisic acid in drought-primed seedlings reveal their roles in subsequent stress. They also displayed higher gibberellic acid and indole acetic acid. A principal component analysis showed that the seedlings responded differently to drought if they had previously suffered a drought, mainly due to a higher capacity for pigment protection, oxidative scavenging, osmolytes, and anti-stress hormones. Our study provides insights into the benefits of stress memory induced in seedlings by early drought priming as a strategy for overcoming subsequent stress.

Human-induced inputs of nitrogen (N) and phosphorus (P) into the biosphere have reached unprecedented levels, particularly N, leading to an escalating global anthropogenic N:P ratio. This ratio has emerged as a significant driver of environmental change, impacting organisms, ecosystems, and global food security. However, the implications of this ratio for human health have been largely overlooked and remain uncertain. This article aims to fill this knowledge gap by exploring the potential effects of N:P ratios on both non-infectious and infectious diseases. Preliminary data emphasize the importance of investigating the influence of N:P ratios on human health, suggesting a potential role in the rise of non-infectious diseases, such as cancer, as well as the proliferation of infectious diseases, including Zika and malaria. These findings highlight the urgent need for increased attention from the scientific community and policymakers regarding the complex impacts of the human-induced biospheric N:P ratio. It is crucial to investigate and understand the underlying mechanisms and drivers behind these effects. Furthermore, there is significant potential for improving human health through the manipulation of N:P ratios and the availability of N and P. This applies not only to medical treatments but also to innovative fertilizer management strategies. These avenues present promising opportunities to address the challenges associated with human health in an ever-changing world.

The substantial carbon sequestration observed in abandoned farmland assumes a pivotal role in mitigating the impacts of global warming. However, it remains unclear how to effectively manage abandoned farmlands to achieve this goal, especially over the long term, and understand the underlying mechanisms. The introduction of legumes can augment vegetation coverage, mitigate soil erosion, and ameliorate soil quality. A long-term study has been conducted in the semiarid region of the Loess Plateau since 2003, with a focus on revegetation strategies involving the introduction of alfalfa (Medicago sativa L.) and sweet clover (Melilotus officinalis L.), while natural abandonment (fallow) served as a control. In this study, we utilized a physical–chemical combination approach to investigate the carbon sequestration process within the 0–20 cm soil layer. Our results demonstrated that, in comparison to the fallow, alfalfa introduction significantly increased soil organic carbon (SOC), light fraction organic carbon (LFOC), and heavy fraction organic carbon (HFOC) concentrations, whereas no significant differences were observed when comparing with sweet clover. The amount and proportion of humic acid (HA) within HFOC were notably higher in alfalfa fields compared to fallow fields. While soil wet-sieved macro-aggregates (>2 mm and 0.25–2 mm) showed no significant difference between alfalfa and fallow fields, soil wet-sieved micro-aggregates were significantly more abundant in alfalfa fields. These wet-sieved micro-aggregates displayed high levels of humification across all fields. As soil wet-sieved aggregate size increased, the proportions of humin (HM) and HA decreased, while the proportion of fulvic acid (FA) increased. We concluded that the formation of HM, HA, and soil wet-sieved micro-aggregates played key roles in promoting long-term soil carbon storage following alfalfa introduction. These findings enhance our understanding of soil ecosystem responses to future climate change and underscore the significance of species selection in restoration processes to effectively mitigate global warming.

The phyllosphere, particularly the leaf surface of plants, harbors a diverse range of microbiomes that play a vital role in the functioning of terrestrial ecosystems. However, our understanding of microbial successions and their impact on functional genes during plant community development is limited. In this study, considering core and satellite microbial taxa, we characterized the phyllosphere microbiome and functional genes in various microhabitats (i.e., leaf litter, moss and plant leaves) across the succession of a plant community in a low-altitude glacier foreland. Our findings indicate that phyllosphere microbiomes and associated ecosystem stability increase during the succession of the plant community. The abundance of core taxa increased with plant community succession and was primarily governed by deterministic processes. In contrast, satellite taxa abundance decreased during plant community succession and was mainly governed by stochastic processes. The abundance of microbial functional genes (such as C, N, and P hydrolysis and fixation) in plant leaves generally increased during the plant community succession. However, in leaf litter and moss leaves, only a subset of functional genes (e.g., C fixation and degradation, and P mineralization) showed a tendency to increase with plant community succession. Ultimately, the community of both core and satellite taxa collaboratively influenced the characteristics of phyllosphere nutrient-cycling genes, leading to the diverse profiles and fluctuating abundance of various functional genes during plant community succession. These findings offer valuable insights into the phyllosphere microbiome and plant–microbe interactions during plant community development, advancing our understanding of the succession and functional significance of the phyllosphere microbial community.

As a key soil carbon process, changes in plant root growth may have a dramatic impact on the global ecosystem’s carbon cycle. Fine root functional traits and fine root biomass can be used as important indexes of plant root growth. Compared with the much better understood relationships between aboveground plant functional traits and aboveground biomass, knowledge on the relationships between fine root functional traits and belowground biomass still remains limited. In this study, plant fine roots in 30 abandoned lands, 9 woodlands, 29 alfalfa grasslands, 30 Caragana shrublands and 29 croplands were sampled at 0–20 and 20–40 cm soil depths in Zhonglianchuan, Yuzhong County, Gansu Province, China (36°02′ N, 104°24′ E), to clarify the characteristics of the relationships between fine root functional traits (e.g., diameter, specific root area (SRA) and specific root length (SRL)) and fine root biomass at 0–20 and 20–40 cm soil depths. The results showed that the relationships between the fine root functional traits and fine root biomass in these ecosystems were robust, allowing for the use of an allometric growth model at both 0–20 and 20–40 cm soil depths (p < 0.05). Specifically, the relationship between root diameter and fine root biomass was consistent with highly significant positive power, while highly significant negative power relationships of SRA and SRL with fine root biomass were observed (p < 0.01, except the root diameter–biomass models in the woodlands in the 0–20 cm soil layer (p = 0.017) and 20–40 cm soil layer (p = 0.025)). The results can provide some parameters for these terrestrial ecosystem process models. From this perspective, our study is beneficial in the construction of suitable strategies to increase plant biomass, which will help with the restoration of the semi-arid region of the Loess Plateau of China.

Abstract The massive use of fertilizers during the last decades allowed a great increase in the global capacity of food production. However, in the last years, several studies highlight the inefficiency and country asymmetries in the use of these fertilizers that generated environmental problems, soil nutritional imbalances and not optimal food production. We have aimed to summarize this information and identify and disentangle the key caveats that should be solved. Inadequate global management of fertilization produces areas with serious nutrient deficits in croplands linked with insufficient access to fertilizers that clearly limit food production, and areas that are overfertilized with the consequent problems of environmental pollution affecting human health. A more efficient use of nitrogen (N), phosphorus (P) and potassium (K) fertilizers for food security while preserving the environment is thus needed. Nutrient imbalances, particularly the disequilibrium of the N:P ratio due to the unbalanced release of N and P from anthropogenic activities, mainly by crop fertilization and expanding N-fixing crops that have continuously increased the soil N:P ratio, is another issue to resolve. This imbalance has already affected several terrestrial and aquatic ecosystems, altering their species composition and functionality and threatening global biodiversity. The different economic and geopolitical traits of these three main macronutrient fertilizers must be considered. P has the fewest reserves, depending mostly on mineable efforts, with most of the reserves concentrated in very few countries (85% in Morocco). This problem is a great concern for the current and near-future access to P for low-income countries. N is instead readily available due to the well-established and relatively low-cost Haber–Bosch synthesis of ammonium from atmospheric N2, which is increasingly used, even in some low-income countries producing an increasing imbalance in nutrient ratios with the application of P and K fertilizers. The anthropogenic inputs of these three macronutrients to the environment have reached the levels of the natural fluxes, thereby substantially altering their global cycles. The case of the excess of N fertilization is especially paradigmatic in several areas of the world, where continental water sources have become useless due to the higher nitrate concentrations. The management of N, P and K fertilizers is thus in the center of the main dichotomy between food security and environmentally driven problems, such as climate change or eutrophication/pollution. Such a key role demands new legislation for adopting the well-known and common-sense 4R principle (right nutrient source at the right rate, right time and right place) that would help to ensure the appropriate use of nutrient resources and the optimization of productivity.

Measurement(s) plant trait Technology Type(s) various Factor Type(s) none Sample Characteristic - Organism Tracheophyta Sample Characteristic - Environment natural environment Sample Characteristic - Location global

Abstract Background Alhagi sparsifolia (Camelthorn) is a leguminous shrub species that dominates the Taklimakan desert’s salty, hyperarid, and infertile landscapes in northwest China. Although this plant can colonize and spread in very saline soils, how it adapts to saline stress in the seedling stage remains unclear so a pot-based experiment was carried out to evaluate the effects of four different saline stress levels (0, 50, 150, and 300 mM) on the morphological and physio-biochemical responses in A. sparsifolia seedlings. Results Our results revealed that N-fixing A. sparsifolia has a variety of physio-biochemical anti-saline stress acclimations, including osmotic adjustments, enzymatic mechanisms, and the allocation of metabolic resources. Shoot–root growth and chlorophyll pigments significantly decreased under intermediate and high saline stress. Additionally, increasing levels of saline stress significantly increased Na+ but decreased K+ concentrations in roots and leaves, resulting in a decreased K+/Na+ ratio and leaves accumulated more Na + and K + ions than roots, highlighting their ability to increase cellular osmolarity, favouring water fluxes from soil to leaves. Salt-induced higher lipid peroxidation significantly triggered antioxidant enzymes, both for mass-scavenging (catalase) and cytosolic fine-regulation (superoxide dismutase and peroxidase) of H2O2. Nitrate reductase and glutamine synthetase/glutamate synthase also increased at low and intermediate saline stress levels but decreased under higher stress levels. Soluble proteins and proline rose at all salt levels, whereas soluble sugars increased only at low and medium stress. The results show that when under low-to-intermediate saline stress, seedlings invest more energy in osmotic adjustments but shift their investment towards antioxidant defense mechanisms under high levels of saline stress. Conclusions Overall, our results suggest that A. sparsifolia seedlings tolerate low, intermediate, and high salt stress by promoting high antioxidant mechanisms, osmolytes accumulations, and the maintenance of mineral N assimilation. However, a gradual decline in growth with increasing salt levels could be attributed to the diversion of energy from growth to maintain salinity homeostasis and anti-stress oxidative mechanisms.

Leaf functional traits are increasingly used as proxies for plant functions. Here, the authors show that leaf water affects other leaf traits and is a better predictor of whole-leaf photosynthesis and leaf area than leaf nitrogen or phosphorus content.

We examined how afforestation patterns impact carbon (C), nitrogen (N), and phosphorus (P) stoichiometry in the plant-litter-soil system. Plant leaf, branch, stem, and root, litter, and soil samples were collected from mixed-species plantations of Robinia pseudoacacia with Amygdalus davidiana (RPAD), R. pseudoacacia with Armeniaca sibirica (RPAS), and monocultures of R. pseudoacacia (RP), A. davidiana (AD), and A. sibirica (AS) in the Loess Hilly Region. The results showed that in mixed-species plantations, R. pseudoacacia had lower leaf N and P concentrations than in monocultures, while both A. davidiana and A. sibirica had higher leaf N and P concentrations. Soil P limited tree growth in both afforestation models. Mixing R. pseudoacacia with A. davidiana or A. sibirica reduced N-limitation during litter decomposition. Average soil total N and P concentrations were higher in RPAS than in RPAD, and both were higher than the corresponding monocultures. The average soil C:N ratio was the smallest in RPAS, while the average soil C:P ratio was larger in RPAS than in RP. A positive correlation between N and P concentrations, and between C:N and C:P ratios, was found in litter and all plant organs of mono- and mixed-stands. Alternatively, for N concentration and C:N ratio, the correlations between plant (i.e., leaf, branch, root) and litter and between plant and soil were inverse between plantation types. RPAD has an increased litter decomposition rate to release N and P, while RPAS has a faster rate of soil N mineralization. RPAD was the best plantation (mixed) to improve biogeochemical cycling, as soil nutrient restrictions, particularly for P-limitation, on trees growth were alleviated. This study thus provides insights into suitable tree selection and management by revealing C:N:P stoichiometry in the plant-litter-soil system under different afforestation patterns.

Arid ecosystems are characterized by low availability and mobility of soil nutrients and slow geochemical cycles. Management of native vegetation in such ecosystems for fuel, livestock grazing, and other agricultural activities (burning and cutting) may threaten semi-natural communities due to the changes in nutrient cycles and soil fertility. Alhagi sparsifolia is a dominant perennial legume in the Taklamakan Desert of northwestern China and has been used as fodder for livestock and plays a crucial ecological role in stabilizing dunes in the oasis-desert ecotone. We evaluated the effects of long-term (12 years) burning and cutting of plant biomass on the mineral nutrition of A. sparsifolia and associated soils at two depths (0–50 and 50–100 cm) in the field conditions following the block design experiment. We found that burning effects tended to be restricted to the topsoil (0–50 cm), and the concentration of many micro-and macronutrients was increased. Burning was associated with a decrease in plant nitrogen (N) and phosphorus (P) concentration, whereas concentrations of other micro-and macronutrients increased; overall, burning reduced foliar stocks of N, P, and potassium (K). Annual cutting elicited smaller increases in soil mineral (total sulfur, total P, calcium, magnesium, and available P and K) concentrations than burning, and soil enzymatic activities increased. There were contrasting response patterns of leaf N and P concentration and macro-and micronutrients between the two management approaches. Burning and cutting reduced leaf N and P concentrations, while changes in root and shoot N and P concentrations depended on treatments. Thus, burning and cutting of A. sparsifolia impact organ nutrient stoichiometry (increased losses of macronutrients from arid plant-soil ecosystems) and nutritional quality (for feeding livestock), particularly due to predicted rises in extreme climatic events under climate change that are expected to increase risks of soil erosion, however, impacts on native trophic webs remain unclear.

Carbon dioxide removal (CDR) that increases the area of forest cover or bio-energy crops inherently competes for land with crop and livestock systems, compromising food security, or will encroach natural lands, compromising biodiversity. Mass deployment of these terrestrial CDR technologies to reverse climate change therefore cannot be achieved without a substantial intensification of agricultural output, i.e., producing more food on less land. This poses a major challenge, particularly in regions where arable land is little available or severely degraded and where agriculture is crucial to sustain people's livelihoods, such as the Global South. Enhanced silicate weathering, biochar amendment, and soil carbon sequestration are CDR techniques that avoid this competition for land and may even bring about multiple co-benefits for food production. This paper elaborates on the idea to take these latter CDR technologies a step further and use them not only to drawdown CO2 from the atmosphere, but also to rebuild fertile soils (negative erosion) in areas that suffer from pervasive land degradation and have enough water available for agriculture. This way of engineering topsoil could contribute to the fight against malnutrition in areas where crop and livestock production currently is hampered by surface erosion and nutrient depletion, and thereby alleviate pressure on intact ecosystems. The thrust of this perspective is that synergistically applying multiple soil-related CDR strategies could restore previously degraded soil, allowing it to come back into food production (or become more productive), potentially alleviating pressure on intact ecosystems. In addition to removing CO2 from the atmosphere, this practice could thus contribute to reducing poverty and hunger and to protection of biodiversity.

Rice paddies represent approximately 1.2% of the global soil organic carbon pool and contain 20% more soil organic carbon per hectare than croplands on average, according to a global synthesis.

Abstract Resorption is the active withdrawal of nutrients before leaf abscission. This mechanism represents an important strategy to maintain efficient nutrient cycling; however, resorption is poorly characterized in old‐growth tropical forests growing in nutrient‐poor soils. We investigated nutrient resorption from leaves in 39 tree species in two tropical forests on the Guiana Shield, French Guiana, to investigate whether resorption efficiencies varied with soil nutrient, seasonality, and species traits. The stocks of P in leaves, litter, and soil were low at both sites, indicating potential P limitation of the forests. Accordingly, mean resorption efficiencies were higher for P (35.9%) and potassium (K; 44.6%) than for nitrogen (N; 10.3%). K resorption was higher in the wet (70.2%) than in the dry (41.7%) season. P resorption increased slightly with decreasing total soil P; and N and P resorptions were positively related to their foliar concentrations. We conclude that nutrient resorption is a key plant nutrition strategy in these old‐growth tropical forests, that trees with high foliar nutrient concentration reabsorb more nutrient, and that nutrients resorption in leaves, except P, are quite decoupled from nutrients in the soil. Seasonality and biochemical limitation played a role in the resorption of nutrients in leaves, but species‐specific requirements obscured general tendencies at stand and ecosystem level.

Carbon (C), nitrogen (N), and phosphorus (P) stoichiometry and their allometric relationships in soil and plants are hot topics that attract a lot of attention, while those rocks that form soils are often neglected. Weathering is a common geological phenomenon that may significantly influence the nutrient composition and release of nutrients from rock and its inherent soils. This study presents C, N, and P concentrations data as well as microscope petrological photographs of fresh and weathered sandstones from Longhushan World Geopark in SE China, in an attempt to investigate C, N, and P stoichiometry of rocks before and after weathering and discuss the driving mechanisms. The results show that weathering significantly decreased rock C, C/N, and C/P concentrations, slightly decreased N and N/P concentrations, and slightly increased P concentration. Microscope observations show that fresh sandstones contain calcite, apatite, microplagioclase, and organic matter, while weathered sandstones feature apatite and organic matter. The flexible allometric relationships and mineral changes before and after rock weathering indicate that chemical mechanisms, such as dissolution of carbonate and hydration of microplagioclase, have changed the existence form of C, N, P and, thus, significantly influence rock C, N, and P stoichiometry. This stoichiometry feature can be in turn used to reflect the regulation effect of rock weathering.

Despite growing aquaculture production and environmental concerns on phosphorus (P) enrichment, the P budgets of fisheries have been largely overlooked. Here, Huang et al. calculate global fishery P budgets and estimate P use efficiency for a wide range of aquaculture systems.

Climate change could negatively alter plant ecosystems if rising temperatures exceed optimal conditions for obtaining carbon. The acclimation of plants to higher temperatures could mitigate this effect, but the potential of subtropical forests to acclimate still requires elucidation. We used space-for-time substitution to determine the photosynthetic and respiratory-temperature response curves, optimal temperature of photosynthesis (Topt), photosynthetic rate at Topt, temperature sensitivity (Q10), and the rate of respiration at a standard temperature of 25°C (R25) for Pinus taiwanensis at five elevations (1200, 1400, 1600, 1800, and 2000 m) in two seasons (summer and winter) in the Wuyi Mountains in China. The response of photosynthesis in P. taiwanensis leaves to temperature at the five elevations followed parabolic curves, and the response of respiration to temperature increased with temperature. Topt was higher in summer than winter at each elevation and decreased significantly with increasing elevation. Q10 decreased significantly with increasing elevation in summer but not winter. These results showed a strong thermal acclimation of foliar photosynthesis and respiration to current temperatures across elevations and seasons, and that R25 increased significantly with elevation and were higher in winter than summer at each elevation indicating that the global warming can decrease R25. These results strongly suggest that this thermal acclimation will likely occur in the coming decades under climate change, so the increase in respiration rates of P. taiwanensis in response to climatic warming may be smaller than predicted and thus may not increase atmospheric CO2 concentrations.

Abstract The functional adaptive responses of higher plants to biotic interactions with herbivores and fungi have long been topics of research. One constraint to obtaining a comprehensive understanding of the most general plant responses, however, has been the difficulty of studying all plant functional shifts simultaneously due to analytical limitations. Now this is possible with the advent of metabolomics. Using 151 records from the WEB of SCIENCE database, we have analyzed the development and application of metabolomic profiles to ecological studies in the last two decades. We have used meta‐analysis and pathway enrichment analyses to assess the whole set of constitutive and inducible defenses. Constitutive defenses against herbivores were mainly based on a significant high level of the metabolism of several amino acids with parallel increases in the concentrations of flavones (phenolics) and saponins (glycosides). Inducible defenses, though, were mainly based on the increases in concentration of methyl‐ketone, pantothenate, and Coenzyme A. Butyrate metabolism and the mitochondrial electron‐transport chain were upregulated, in agreement with previous reports that herbivory‐activated plant chemical defenses were mainly based on jasmonic acid, salicylic acid, and ethylene‐associated pathways. The metabolic responses/acclimations to pathogenic fungi were mainly linked with increases in aspartate and pyruvate metabolism, the transfer of acetyl groups within mitochondria, and the upregulation of branched‐chain amino acids degradation pathways. These responses/acclimations were accompanied by higher concentrations of the most important groups of secondary metabolites such as phenolics (anthocyanins, flavonoids), quinones, alkaloids, terpenoids, and polyamines and other compounds related to antistress mechanisms such as proline. The leaves of mycorrhized plants accumulated nucleotide sugars, sphingolipids, and methylhistidine. These responses were associated with maintaining the integrity of plant cell membranes under fungal hypha penetration. The responses were accompanied by increases in the concentrations of phenolics, blumenols, and alkaloids and decreases in the concentrations of polyamines, consistent with the mycorrhizal inhibition of polyamines. This summary provides a clear synthesis of the most successful plant strategies selected after millions of years of evolution and will be a very promising tool for the management of crops and ecosystems and for selecting the main lines in breeding studies for future research.

Calligonum mongolicum is a phreatophyte playing an important role in sand dune fixation, but little is known about its responses to drought and P fertilization. In the present study, we performed a pot experiment to investigate the effects of P fertilization under drought or well-watered conditions on multiple morpho-physio-biochemical attributes of C. mongolicum seedlings. Drought stress leads to a higher production of hydrogen peroxide (H2O2) and malondialdehyde (MDA), leading to impaired growth and metabolism. However, C. mongolicum exhibited effective drought tolerance strategies, including a higher accumulation of soluble sugars, starch, soluble protein, proline, and significantly higheractivities of peroxidase (POD) and catalase (CAT) enzymes. P fertilization increased the productivity of drought-stressed seedlings by increasing their growth, assimilative shoots relative water content, photosynthetic pigments, osmolytes accumulation, mineral nutrition, N assimilation, and reduced lipid peroxidation. Our findings suggest the presence of soil high P depletion and C. mongolicum high P requirements during the initial growth stage. Thus, P can be utilized as a fertilizer to enhance the growth and productivity of Calligonum vegetation and to reduce the fragility of the hyper-arid desert of Taklamakan in the context of future climate change.

Ecological stoichiometry is essential for understanding the biogeochemical cycle in forest ecosystems. However, previous studies of ecological stoichiometry have rarely considered the impacts of forest origins, which could help explain why to date so much uncertainty has been reported on this subject. In this study, we tried to reduce this uncertainty by examining carbon (C), nitrogen (N) and phosphorus (P) in roots, litter and soil in both natural and plantation forests throughout China. The sampled forest sites were divided into three groups according to the identified succession stages: early (ES), middle (MS) and late (LS) stages. Our results show that soil C, N and P concentrations were significantly higher in natural (NF) than in plantation (PL) forests. As succession/growth proceeded, P concentrations significantly increased in litter, roots and soil in NF, while the opposite occurred in PL. These results indicate that NF are able to use P more efficiently than PL, especially in the LS. Furthermore, the higher root N:P ratio indicates that the growth of PL was limited by P in both MS and LS. Our results also suggest that geographical and climatic factors are not the dominant factors in the differences in P between NF and PL, and, even more clearly and importantly, that native forests with native species are more capable of conserving P than planted forests, which are frequently less diverse and dominated by fast-growing non-site native species. These results will help improve biogeochemical models and forest management throughout the world.

More efficient use of soil resources, such as nitrogen (N) and phosphorus (P), can improve plant community resistance and resilience against drought in arid and semi-arid lands. Intercropping of legume and non-legumes can be an effective practice for enhancing P mineralization uptake, and plant nutrient status. However, it remains unclear how intercropping systems using desert plant species impact soil-plant P fractions and how they affect N and water uptake capacity. Alhagi sparsifolia (a legume) and Karelinia caspia (a non-legume) are dominant plant species in the Taklamakan Desert in Xinjiang Province, China. However, there is a lack of knowledge of whether these species, when intercropped, can trigger synergistic processes and mechanisms that drive more efficient use of soil resources. Thus, in a field experiment over two years, we investigated the impact of monoculture and intercropping of these plant species on soil-plant P fractions and soil-plant nutrients. Both plant species’ foliar nutrient (N, P, and K) concentrations were higher under monoculture than intercropping (except K in K. caspia). Nucleic acid P was higher in the monoculture plots of A. sparsifolia, consistent with higher soil labile P, while metabolic P was higher in monoculture K. caspia, associated with higher soil moderately labile Pi. However, both species had a higher residual P percentage in the intercropping system. Soils from monoculture and intercropped plots contained similar microbial biomass carbon (MBC), but lower microbial biomass N:microbial biomass phosphorus (MBN:MBP) ratio associated with reduced N-acetylglucosaminidase (NAG) activity in the intercropped soils. This, together with the high MBC:MBN ratio in intercropping and the lack of apparent general effects of intercropping on MBC:MBP, strongly suggest that intercropping improved microbe N- but not P-use efficiency. Interestingly, while EC and SWC were higher in the soil of the K. caspia monoculture plots, EC was significantly lower in the intercropped plots. Plants obtained better foliar nutrition and soil P mineralization in monocultures than in intercropping systems. The possible positive implications of intercropping for reducing soil salinization and improving soil water uptake and microbial N-use efficiency could have advantages in the long term and its utilization should be explored further in future studies.

Summary: Lockdown measures are essential to containing the spread of coronavirus disease 2019 (COVID-19), but they will slow down economic growth by reducing industrial and commercial activities. However, the benefits of activity control from containing the pandemic have not been examined and assessed. Here we use daily carbon dioxide (CO2) emission reduction in China estimated from statistical data for energy consumption and satellite data for nitrogen dioxide (NO2) measured by the Ozone Monitoring Instrument (OMI) as an indicator for reduced activities consecutive to a lockdown. We perform a correlation analysis to show that a 1% day−1 decrease in the rate of COVID-19 cases is associated with a reduction in daily CO2 emissions of 0.22% ± 0.02% using statistical data for energy consumption relative to emissions without COVID-19, or 0.20% ± 0.02% using satellite data for atmospheric column NO2. We estimate that swift action in China is effective in limiting the number of COVID-19 cases

Acid phosphatase produced by plants and microbes plays a fundamental role in the recycling of soil phosphorus (P). A quantification of the spatial variation in potential acid phosphatase activity (AP) on large spatial scales and its drivers can help to reduce the uncertainty in our understanding of bio-availability of soil P. We applied two machine-learning methods (Random forests and back-propagation artificial networks) to simulate the spatial patterns of AP across Europe by scaling up 126 site observations of potential AP activity from field samples measured in the laboratory, using 12 environmental drivers as predictors. The back-propagation artificial network (BPN) method explained 58% of AP variability, more than the regression tree model (49%). In addition, BPN was able to identify the gradients in AP along three transects in Europe. Partial correlation analysis revealed that soil nutrients (total nitrogen, total P, and labile organic P) and climatic controls (annual precipitation, mean annual temperature, and temperature amplitude) were the dominant factors influencing AP variations in space. Higher AP occurred in regions with higher mean annual temperature, precipitation and higher soil total nitrogen. Soil TP and Po were non-monotonically correlated with modeled AP for Europe, indicating diffident strategies of P utilization by biomes in arid and humid area. This study helps to separate the influences of each factor on AP production and to reduce the uncertainty in estimating soil P availability. The BPN model trained with European data, however, could not produce a robust global map of AP due to the lack of representative measurements of AP for tropical regions. Filling this data gap will help us to understand the physiological basis of P-use strategies in natural soils.

Afforestation is often used to increase terrestrial carbon sequestration and restore ecosystem services. Here, the authors show that afforestation can also neutralize soil pH by lowering pH in alkaline soil but raising pH in acid soil, thus further promoting the restoration of ecosystem functions.

Tropical forests are biodiversity hotspots, but it is not well understood how this diversity is structured and maintained. One hypothesis rests on the generation of a range of metabolic niches, with varied composition, supporting a high species diversity. Characterizing soil metabolomes can reveal fine-scale differences in composition and potentially help explain variation across these habitats. In particular, little is known about canopy soils, which are unique habitats that are likely to be sources of additional biodiversity and biogeochemical cycling in tropical forests. We studied the effects of diverse tree species and epiphytes on soil metabolomic profiles of forest floor and canopy suspended soils in a French Guianese rainforest. We found that the metabolomic profiles of canopy suspended soils were distinct from those of forest floor soils, differing between epiphyte-associated and non-epiphyte suspended soils, and the metabolomic profiles of suspended soils varied with host tree species, regardless of association with epiphyte. Thus, tree species is a key driver of rainforest suspended soil metabolomics. We found greater abundance of metabolites in suspended soils, particularly in groups associated with plants, such as phenolic compounds, and with metabolic pathways related to amino acids, nucleotides, and energy metabolism, due to the greater relative proportion of tree and epiphyte organic material derived from litter and root exudates, indicating a strong legacy of parent biological material. Our study provides evidence for the role of tree and epiphyte species in canopy soil metabolomic composition and in maintaining the high levels of soil metabolome diversity in this tropical rainforest. It is likely that a wide array of canopy microsite-level environmental conditions, which reflect interactions between trees and epiphytes, increase the microscale diversity in suspended soil metabolomes.

Light quality modulates plant growth, development, physiology, and metabolism through a series of photoreceptors perceiving light signal and related signaling pathways. Although the partial mechanisms of the responses to light quality are well understood, how plants orchestrate these impacts on the levels of above- and below-ground tissues and molecular, physiological, and morphological processes remains unclear. However, the re-allocation of plant resources can substantially adjust plant tolerance to stress conditions such as reduced water availability. In this study, we investigated in two spring barley genotypes the effect of ultraviolet-A (UV-A), blue, red, and far-red light on morphological, physiological, and metabolic responses in leaves and roots. The plants were grown in growth units where the root system develops on black filter paper, placed in growth chambers. While the growth of above-ground biomass and photosynthetic performance were enhanced mainly by the combined action of red, blue, far-red, and UV-A light, the root growth was stimulated particularly by supplementary far-red light to red light. Exposure of plants to the full light spectrum also stimulates the accumulation of numerous compounds related to stress tolerance such as proline, secondary metabolites with antioxidative functions or jasmonic acid. On the other hand, full light spectrum reduces the accumulation of abscisic acid, which is closely associated with stress responses. Addition of blue light induced accumulation of γ-aminobutyric acid (GABA), sorgolactone, or several secondary metabolites. Because these compounds play important roles as osmolytes, antioxidants, UV screening compounds, or growth regulators, the importance of light quality in stress tolerance is unequivocal.

Forest ecosystems in the Mediterranean Basin are mostly situated in the north of the Basin (mesic). In the most southern and dry areas, the forest can only exist where topography and/or altitude favor a sufficient availability of water to sustain forest biomass. We have conducted a thorough review of recent literature (2000–2021) that clearly indicates large direct and indirect impacts of increasing drought conditions on the forests of the Mediterranean Basin, their changes in surface and distribution areas, and the main impacts they have suffered. We have focused on the main trends that emerge from the current literature and have highlighted the main threatens and management solution for the maintenance of these forests. The results clearly indicate large direct and indirect impacts of increasing drought conditions on the forests of the Mediterranean Basin. These increasing drought conditions together with over-exploitation, pest expansion, fire and soil degradation, are synergistically driving to forest regression and dieback in several areas of this Mediterranean Basin. These environmental changes have triggered responses in tree morphology, physiology, growth, reproduction, and mortality. We identified at least seven causes of the changes in the last three decades that have led to the current situation and that can provide clues for projecting the future of these forests: (i) The direct effect of increased aridity due to more frequent and prolonged droughts, which has driven Mediterranean forest communities to the limit of their capacity to respond to drought and escape to wetter sites, (ii) the indirect effects of drought, mainly by the spread of pests and fires, (iii) the direct and indirect effects of anthropogenic activity associated with general environmental degradation, including soil degradation and the impacts of fire, species invasion and pollution, (iv) human pressure and intense management of water resources, (v) agricultural land abandonment in the northern Mediterranean Basin without adequate management of new forests, (vi) very high pressure on forested areas of northern Africa coupled with the demographic enhancement, the expansion of crops and higher livestock pressure, and the more intense and overexploitation of water resources uses on the remaining forested areas, and (vii) scarcity and inequality of human management and policies, depending on the national and/or regional governments and agencies, being unable to counteract the previous changes. We identified appropriate measures of management intervention, using the most adequate techniques and processes to counteract these impacts and thus to conserve the health, service capacity, and biodiversity of Mediterranean forests. Future policies should, moreover, promote research to improve our knowledge of the mechanisms of, and the effects on, nutrient and carbon plant-soil status concurrent with the impacts of aridity and leaching due to the effects of current changes. Finally, we acknowledge the difficulty to obtain an accurate quantification of the impacts of increasing aridity rise that warrants an urgent investment in more focused research to further develop future tools in order to counteract the negative effects of climate change on Mediterranean forests.

Nitrogen (N) deposition is a key driver of global change with significant effects on carbon (C) cycling, species fitness, and diversity; however, its effects on Mediterranean ecosystems are unclear. Here, we simulated N deposition in an N-fertilization experiment with 15N-labeled fertilizer in a montane evergreen Mediterranean holm oak forest, in central Catalonia, to quantify short-term impacts on leaf, leaf litter elemental composition, and resorption efficiency in three dominant species (Quercus ilex, Phillyrea latifolia, and Arbutus unedo). We found that even under drought conditions, 15N isotope analysis of leaf and leaf litter showed a rapid uptake of the added N, suggesting an N deficient ecosystem. Species responses to N fertilization varied, where A. unedo was unaffected and the responses in P. latifolia and Q. ilex were similar, albeit with contrasting magnitude. P. latifolia benefited the most from N fertilization under drought conditions of the experimental year. These differences in species response could indicate impacts on species fitness, competition, and abundance under increased N loads in Mediterranean forest ecosystems. Further research is needed to disentangle interactions between long-term N deposition and the drought predicted under future climate scenarios in Mediterranean ecosystems.

Tropical plants are expected to have a higher variety of defensive traits, such as a more diverse array of secondary metabolic compounds in response to greater pressures of antagonistic interactions, than their temperate counterparts. We test this hypothesis using advanced metabolomics linked to a novel stoichiometric compound classification to analyze the complete foliar metabolomes of four tropical and four temperate tree species, which were selected so that each subset contained the same amount of phylogenetic diversity and evenness. We then built Bayesian phylogenetic multilevel models to test for tropical–temperate differences in metabolite diversity for the entire metabolome and for four major families of secondary compounds. We found strong evidence supporting that the leaves of tropical tree species have a higher phenolic diversity. The functionally closer group of polyphenolics also showed moderate evidence of higher diversity in tropical species, but there were no differences either for the entire metabolome or for the other major families of compounds analyzed. This supports the interpretation that this tropical–temperate contrast must be related to the functional role of phenolics and polyphenolics.

The soil quality index (SQI) is based on several key indicators and is used to assess soil quality. More than 250,000 ha of walnut saplings (Juglans regia L.) were planted in previous cropland areas in the Sichuan Basin, China, using a range of soil cover types that may affect soil quality with effects that are unclear. We investigated the effects of white film (WF), black film (BF), shade netting (SN), and maize straw (MS) soil cover types and an uncovered control type (CK) on soil chemical and biological indicators and the SQI in the 0–15 cm soil layer in a young walnut forest in the Sichuan Basin over a 27-month study period. The results showed that all soil cover types increased the soil organic matter (SOM), total potassium (TK), and available potassium (AK) concentrations (p < 0.05), whereas the total nitrogen (TN) and available nitrogen (AN) concentrations were greater only in soils covered by MS than in CK (p < 0.05). The available phosphorus concentrations were 64.1 and 193.2% greater in soils covered by BF and MS treatments, respectively, than in the CK (p < 0.05). The numbers of soil faunal groups (N) were 45.7, 36.4, 37.2, and 101.5% higher in WF, BF, SN, and MS, respectively, than in CK (p < 0.05); the individual numbers (S) were 92.3, 36.2, 100.8, and 154.5% greater in WF, BF, SN, and MS, respectively, than in CK (p < 0.05). The microbial biomass carbon (MBC) was 15.5, 32.3, 45.0, and 77.1% greater in WF, BF, SN, and MS than in CK, respectively (p < 0.05). Redundancy discriminant analysis revealed strong positive interactions between biological indicators (MBC, N, and S) and SOM, AN, and AK concentrations. SOM, TN, AK, S, and MBC were the minimum required variables for the effective assessment of the SQI. All four soil cover types led to an improved SQI (p < 0.05), and MS had the greatest effect on SOM, TN, AN, AP, N, S, MBC, and SQI (p < 0.05). In conclusion, all four soil cover types increased the SOM levels, TK, AK, and MBC concentrations, soil faunal diversity, and SQI. The MS treatment was the most cost-effective and efficient measure to improve soil fertility, ecological function, and overall soil quality in the studied walnut forest.

Potassium, mostly as a cation (K+), together with calcium (Ca2+) are the most abundant inorganic chemicals in plant cellular media, but they are rarely discussed. K+ is not a component of molecular or macromolecular plant structures, thus it is more difficult to link it to concrete metabolic pathways than nitrogen or phosphorus. Over the last two decades, many studies have reported on the role of K+ in several physiological functions, including controlling cellular growth and wood formation, xylem–phloem water content and movement, nutrient and metabolite transport, and stress responses. In this paper, we present an overview of contemporary findings associating K+ with various plant functions, emphasizing plant-mediated responses to environmental abiotic and biotic shifts and stresses by controlling transmembrane potentials and water, nutrient, and metabolite transport. These essential roles of K+ account for its high concentrations in the most active plant organs, such as leaves, and are consistent with the increasing number of ecological and agricultural studies that report K+ as a key element in the function and structure of terrestrial ecosystems, crop production, and global food security. We synthesized these roles from an integrated perspective, considering the metabolic and physiological functions of individual plants and their complex roles in terrestrial ecosystem functions and food security within the current context of ongoing global change. Thus, we provide a bridge between studies of K+ at the plant and ecological levels to ultimately claim that K+ should be considered at least at a level similar to N and P in terrestrial ecological studies.

Atmospheric nitrogen (N) and sulfur (S) deposition in subtropical forests has increased rapidly and the current level is very high, thus seriously affecting nutrient (e.g., N and phosphorus (P)) release from litter. However, the specific effects of S addition and its interaction with N on the release of carbon (C), N, and P from litter in subtropical evergreen broadleaved forests are unclear. Therefore, a two-year field experiment was performed using a litterbag method in a subtropical evergreen broadleaved forest in western China to examine the responses of litter decomposition and nutrient release to the control (CK), added N (+N), added S (+S), and added N and S (+NS) treatments. The results showed that the remaining litter mass, lignin, cellulose, C, N, P, and litter N/P ratio were higher, whereas the litter C/N ratio and soil pH were lower in the fertilization treatments than in CK. The annual decomposition coefficients (k-values) in the +N, +S, and +NS treatments were 0.384 ± 0.002, 0.378 ± 0.002, and 0.374 ± 0.001 year−1, respectively, which were significantly lower than the k-values in CK (0.452 ± 0.005 year−1, p < 0.05). The remaining mass, lignin, cellulose, C, and litter N/P ratio were higher, whereas the soil pH was lower in the +NS treatment than in the +N and +S. The interactive effects of N addition and S addition on the remaining litter lignin, cellulose, C, N, and P; the litter C/N, C/P, and N/P ratios; and the soil pH were significant (p < 0.05). In conclusion, the addition of N and S synergistically decreased the degradation of lignin and cellulose and the release of C and N and increased the litter N/P ratio, suggesting that external N and S inputs synergistically slowed the release of C and N from litter and exacerbated litter P limitation during decomposition in this forest.

Fertilisation of cereal crops with nitrogen (N) has increased in the last five decades. In particular, the fertilisation of wheat crops increased by nearly one order of magnitude from 1961 to 2010, from 9.84 to 93.8 kg N ha−1 y−1. We hypothesized that this intensification of N fertilisation would increase the content of allergenic proteins in wheat which could likely be associated with the increased pathology of coeliac disease in human populations. An increase in the per capita intake of gliadin proteins, the group of gluten proteins principally responsible for the development of coeliac disease, would be the responsible factor. We conducted a global meta-analysis of available reports that supported our hypothesis: wheat plants growing in soils receiving higher doses of N fertilizer have higher total gluten, total gliadin, α/β-gliadin, γ-gliadin and ω-gliadin contents and higher gliadin transcription in their grain. We thereafter calculated the per capita annual average intake of gliadins from wheat and derived foods and found that it increased from 1961 to 2010 from approximately 2.4 to 3.8 kg y−1 per capita (+1.4 ± 0.18 kg y−1 per capita, mean ± SE), i.e., increased by 58 ± 7.5%. Finally, we found that this increase was positively correlated with the increase in the rates of coeliac disease in all the available studies with temporal series of coeliac disease. The impacts and damage of over-fertilisation have been observed at an environmental scale (e.g., eutrophication and acid rain), but a potential direct effect of over-fertilisation is thus also possible on human health (coeliac disease).

Productivity of tropical lowland moist forests is often limited by availability and functional allocation of phosphorus (P) that drives competition among tree species and becomes a key factor in determining forestall community diversity. We used non-target 31P-NMR metabolic profiling to study the foliar P-metabolism of trees of a French Guiana rainforest. The objective was to test the hypotheses that P-use is species-specific, and that species diversity relates to species P-use and concentrations of P-containing compounds, including inorganic phosphates, orthophosphate monoesters and diesters, phosphonates and organic polyphosphates. We found that tree species explained the 59% of variance in 31P-NMR metabolite profiling of leaves. A principal component analysis showed that tree species were separated along PC 1 and PC 2 of detected P-containing compounds, which represented a continuum going from high concentrations of metabolites related to non-active P and P-storage, low total P concentrations and high N:P ratios, to high concentrations of P-containing metabolites related to energy and anabolic metabolism, high total P concentrations and low N:P ratios. These results highlight the species-specific use of P and the existence of species-specific P-use niches that are driven by the distinct species-specific position in a continuum in the P-allocation from P-storage compounds to P-containing molecules related to energy and anabolic metabolism.

The number of ecometabolomic studies, which use metabolomic analyses to disentangle organisms’ metabolic responses and acclimation to a changing environment, has grown exponentially in recent years. Here, we review the results and conclusions of ecometabolomic studies on the impacts of four main drivers of global change (increasing frequencies of drought episodes, heat stress, increasing atmospheric carbon dioxide (CO2) concentrations and increasing nitrogen (N) loads) on plant metabolism. Ecometabolomic studies of drought effects confirmed findings of previous target studies, in which most changes in metabolism are characterized by increased concentrations of soluble sugars and carbohydrate derivatives and frequently also by elevated concentrations of free amino acids. Secondary metabolites, especially flavonoids and terpenes, also commonly exhibited increased concentrations when drought intensified. Under heat and increasing N loads, soluble amino acids derived from glutamate and glutamine were the most responsive metabolites. Foliar metabolic responses to elevated atmospheric CO2 concentrations were dominated by greater production of monosaccharides and associated synthesis of secondary metabolites, such as terpenes, rather than secondary metabolites synthesized along longer sugar pathways involving N-rich precursor molecules, such as those formed from cyclic amino acids and along the shikimate pathway. We suggest that breeding for crop genotypes tolerant to drought and heat stress should be based on their capacity to increase the concentrations of C-rich compounds more than the concentrations of smaller N-rich molecules, such as amino acids. This could facilitate rapid and efficient stress response by reducing protein catabolism without compromising enzymatic capacity or increasing the requirement for re-transcription and de novo biosynthesis of proteins.

Manipulative experiments and observations along environmental gradients, the two most common approaches to evaluate the impacts of climate change on nutrient cycling, are generally assumed to produce similar results, but this assumption has rarely been tested. We did so by conducting a meta-analysis and found that soil nutrients responded differentially to drivers of climate change depending on the approach considered. Soil carbon, nitrogen, and phosphorus concentrations generally decreased with water addition in manipulative experiments but increased with annual precipitation along environmental gradients. Different patterns were also observed between warming experiments and temperature gradients. Our findings provide evidence of inconsistent results and suggest that manipulative experiments may be better predictors of the causal impacts of short-term (months to years) climate change on soil nutrients but environmental gradients may provide better information for long-term correlations (centuries to millennia) between these nutrients and climatic features. Ecosystem models should consequently incorporate both experimental and observational data to properly assess the impacts of climate change on nutrient cycling.

BACKGROUND:Tropical rainforests are frequently limited by soil nutrient availability. However, the response of the metabolic phenotypic plasticity of trees to an increase of soil nutrient availabilities is poorly understood. We expected that increases in the ability of a nutrient that limits some plant processes should be detected by corresponding changes in plant metabolome profile related to such processes. METHODOLOGY/PRINCIPAL FINDINGS:We studied the foliar metabolome of saplings of three abundant tree species in a 15 year field NPK fertilization experiment in a Panamanian rainforest. The largest differences were among species and explained 75% of overall metabolome variation. The saplings of the large canopy species, Tetragastris panamensis, had the lowest concentrations of all identified amino acids and the highest concentrations of most identified secondary compounds. The saplings of the "mid canopy" species, Alseis blackiana, had the highest concentrations of amino acids coming from the biosynthesis pathways of glycerate-3P, oxaloacetate and α-ketoglutarate, and the saplings of the low canopy species, Heisteria concinna, had the highest concentrations of amino acids coming from the pyruvate synthesis pathways. CONCLUSIONS/SIGNIFICANCE:The changes in metabolome provided strong evidence that different nutrients limit different species in different ways. With increasing P availability, the two canopy species shifted their metabolome towards larger investment in protection mechanisms, whereas with increasing N availability, the sub-canopy species increased its primary metabolism. The results highlighted the proportional distinct use of different nutrients by different species and the resulting different metabolome profiles in this high diversity community are consistent with the ecological niche theory.

Paddy fields are major sources of global atmospheric greenhouse gases, including methane (CH4) and nitrous oxide (N2O). The different phases previous to emission (production, transport, diffusion, dissolution in pore water and ebullition) despite well-established have rarely been measured in field conditions. We examined them and their relationships with temperature, soil traits and plant biomass in a paddy field in Fujian, southeastern China. CH4 emission was positively correlated with CH4 production, plant-mediated transport, ebullition, diffusion, and concentration of dissolved CH4 in porewater and negatively correlated with sulfate concentration, suggesting the potential use of sulfate fertilizers to mitigate CH4 release. Air temperature and humidity, plant stem biomass, and concentrations of soil sulfate, available N, and DOC together accounted for 92% of the variance in CH4 emission, and Eh, pH, and the concentrations of available N and Fe3+, leaf biomass, and air temperature 95% of the N2O emission. Given the positive correlations between CH4 emission and DOC content and plant biomass, reduce the addition of a carbon substrate such as straw and the development of smaller but higher yielding rice genotypes could be viable options for reducing the release of greenhouse gases from paddy fields to the atmosphere.

Many studies have addressed several plant-insect interaction topics at nutritional, molecular, physiological, and evolutionary levels. However, it is still unknown how flexible the metabolism and the nutritional content of specialist insect herbivores feeding on different closely related plants can be. We performed elemental, stoichiometric, and metabolomics analyses on leaves of two coexisting Pinus sylvestris subspecies and on their main insect herbivore; the caterpillar of the processionary moth (Thaumetopoea pityocampa). Caterpillars feeding on different pine subspecies had distinct overall metabolome structure, accounting for over 10% of the total variability. Although plants and insects have very divergent metabolomes, caterpillars showed certain resemblance to their plant-host metabolome. In addition, few plant-related secondary metabolites were found accumulated in caterpillar tissues which could potentially be used for self-defense. Caterpillars feeding on N and P richer needles had lower N and P tissue concentration and higher C:N and C:P ratios, suggesting that nutrient transfer is not necessarily linear through trophic levels and other plant-metabolic factors could be interfering. This exploratory study showed that little chemical differences between plant food sources can impact the overall metabolome of specialist insect herbivores. Significant nutritional shifts in herbivore tissues could lead to larger changes of the trophic web structure.

The management and improvement of paddy soils fertility are key factors for the future capacity of rice production. The return of rice straw to paddy soils is the best alternative to the application of industrial fertilizers for rice production sustainability. The best strategy for applying rice straw to improve soil nutritional capacity during rice growth has not yet been investigated. We compared straw decomposition in the ditches and ridges in paddy fields subjected to a typical crop management in southeastern China. Straw spread on the ridges provided lower residual straw carbon (C) concentration and mass, lower nitrogen:phosphorus ratio N:P, C:N, and C:P ratios, and lower soil salinity, as well as higher temperature, and higher N- and P-release capacity during the rice crop in comparison to the straw spread in the ditches. Therefore, applying rice straw to the ridges is better strategy than applying it to ditches to enhance rice production.

In Mediterranean habitats, the specialist butterfly Euphydryas aurinia oviposits on Lonicera implexa. Previous work has shown that ovipositing females select and lay a higher number of egg clusters on certain plants. In this paper the results of a field study aimed at assessing whether females use plant size and/or plant or leaf greenness (i.e., chlorophyll concentrations) as cues for oviposition are described. Size of plants did not appear to be an important factor in determining host plant selection, probably because even small plants provide enough resources for the young larvae to reach the diapausing stage and because last instar larvae, the most likely to face resource depletion, can move great distances in search of food. Measurements of both spectral reflectance and chlorophyll concentration of plants failed to reveal differences between host and non-host plants. On the other hand, reflectance and chlorophyll concentration of leaves were found to be important in oviposition choice as egg clusters were generally located on the greenest leaves with the highest chlorophyll contents. This suggests that females use visual cues to select the leaves that will provide optimal growth opportunities for newly hatched larvae. Although there was some indication that plants receiving a greater number of egg clusters also had more leaves of high chlorophyll content, multiple egg batches on single plants could also be a consequence of females being attracted by the presence of conspecific egg clusters.

The increase in aridity, mainly by decreases in precipitation but also by higher temperatures, is likely the main threat to the diversity and survival of Mediterranean forests. Changes in land use, including the abandonment of extensive crop activities, mainly in mountains and remote areas, and the increases in human settlements and demand for more resources with the resulting fragmentation of the landscape, hinder the establishment of appropriate management tools to protect Mediterranean forests and their provision of services and biodiversity. Experiments and observations indicate that if changes in climate, land use and other components of global change, such as pollution and overexploitation of resources, continue, the resilience of many forests will likely be exceeded, altering their structure and function and changing, mostly decreasing, their capacity to continue to provide their current services. A consistent assessment of the impacts of the changes, however, remains elusive due to the difficulty of obtaining simultaneous and complete data for all scales of the impacts in the same forests, areas and regions. We review the impacts of climate change and other components of global change and their interactions on the terrestrial forests of Mediterranean regions, with special attention to their impacts on ecosystem services. Management tools for counteracting the negative effects of global change on Mediterranean ecosystem- services are finally discussed.