785 results on '"John D. Roberts"'
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2. Alterations in promoter interaction landscape and transcriptional network underlying metabolic adaptation to diet
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Yufeng Qin, Sara A. Grimm, John D. Roberts, Kaliopi Chrysovergis, and Paul A. Wade
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Science - Abstract
Metabolic adaptation to different diets results in changes to gene expression. Here, the authors characterise the chromatin landscape and transcriptional network in mice on a diet of high saturated fat, compared to a diet high in carbohydrate, finding a dramatic reprogramming of the liver transcriptional network.
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- 2020
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3. Author Correction: CHD3 helicase domain mutations cause a neurodevelopmental syndrome with macrocephaly and impaired speech and language
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Lot Snijders Blok, Justine Rousseau, Joanna Twist, Sophie Ehresmann, Motoki Takaku, Hanka Venselaar, Lance H. Rodan, Catherine B. Nowak, Jessica Douglas, Kathryn J. Swoboda, Marcie A. Steeves, Inderneel Sahai, Connie T. R. M. Stumpel, Alexander P. A. Stegmann, Patricia Wheeler, Marcia Willing, Elise Fiala, Aaina Kochhar, William T. Gibson, Ana S. A. Cohen, Ruky Agbahovbe, A. Micheil Innes, P. Y. Billie Au, Julia Rankin, Ilse J. Anderson, Steven A. Skinner, Raymond J. Louie, Hannah E. Warren, Alexandra Afenjar, Boris Keren, Caroline Nava, Julien Buratti, Arnaud Isapof, Diana Rodriguez, Raymond Lewandowski, Jennifer Propst, Ton van Essen, Murim Choi, Sangmoon Lee, Jong H. Chae, Susan Price, Rhonda E. Schnur, Ganka Douglas, Ingrid M. Wentzensen, Christiane Zweier, André Reis, Martin G. Bialer, Christine Moore, Marije Koopmans, Eva H. Brilstra, Glen R. Monroe, Koen L. I. van Gassen, Ellen van Binsbergen, Ruth Newbury-Ecob, Lucy Bownass, Ingrid Bader, Johannes A. Mayr, Saskia B. Wortmann, Kathy J. Jakielski, Edythe A. Strand, Katja Kloth, Tatjana Bierhals, The DDD study, John D. Roberts, Robert M. Petrovich, Shinichi Machida, Hitoshi Kurumizaka, Stefan Lelieveld, Rolph Pfundt, Sandra Jansen, Pelagia Deriziotis, Laurence Faivre, Julien Thevenon, Mirna Assoum, Lawrence Shriberg, Tjitske Kleefstra, Han G. Brunner, Paul A. Wade, Simon E. Fisher, and Philippe M. Campeau
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Science - Abstract
The HTML and PDF versions of this Article were updated after publication to remove images of one individual from Figure 1.
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- 2019
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4. CHD3 helicase domain mutations cause a neurodevelopmental syndrome with macrocephaly and impaired speech and language
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Lot Snijders Blok, Justine Rousseau, Joanna Twist, Sophie Ehresmann, Motoki Takaku, Hanka Venselaar, Lance H. Rodan, Catherine B. Nowak, Jessica Douglas, Kathryn J. Swoboda, Marcie A. Steeves, Inderneel Sahai, Connie T. R. M. Stumpel, Alexander P. A. Stegmann, Patricia Wheeler, Marcia Willing, Elise Fiala, Aaina Kochhar, William T. Gibson, Ana S. A. Cohen, Ruky Agbahovbe, A. Micheil Innes, P. Y. Billie Au, Julia Rankin, Ilse J. Anderson, Steven A. Skinner, Raymond J. Louie, Hannah E. Warren, Alexandra Afenjar, Boris Keren, Caroline Nava, Julien Buratti, Arnaud Isapof, Diana Rodriguez, Raymond Lewandowski, Jennifer Propst, Ton van Essen, Murim Choi, Sangmoon Lee, Jong H. Chae, Susan Price, Rhonda E. Schnur, Ganka Douglas, Ingrid M. Wentzensen, Christiane Zweier, André Reis, Martin G. Bialer, Christine Moore, Marije Koopmans, Eva H. Brilstra, Glen R. Monroe, Koen L. I. van Gassen, Ellen van Binsbergen, Ruth Newbury-Ecob, Lucy Bownass, Ingrid Bader, Johannes A. Mayr, Saskia B. Wortmann, Kathy J. Jakielski, Edythe A. Strand, Katja Kloth, Tatjana Bierhals, The DDD study, John D. Roberts, Robert M. Petrovich, Shinichi Machida, Hitoshi Kurumizaka, Stefan Lelieveld, Rolph Pfundt, Sandra Jansen, Pelagia Deriziotis, Laurence Faivre, Julien Thevenon, Mirna Assoum, Lawrence Shriberg, Tjitske Kleefstra, Han G. Brunner, Paul A. Wade, Simon E. Fisher, and Philippe M. Campeau
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Science - Abstract
Chromodomain Helicase DNA-binding (CHD) proteins have been implicated in neurodevelopmental processes. Here, the authors identify missense variants in CHD3 that disturb its chromatin remodeling activities and cause a neurodevelopmental disorder with macrocephaly and speech and language impairment.
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- 2018
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5. Base-Resolution Analysis of DNA Methylation Patterns Downstream of Dnmt3a in Mouse Naïve B Cells
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Christopher G. Duncan, Hrisavgi D. Kondilis-Mangum, Sara A. Grimm, Pierre R. Bushel, Kaliopi Chrysovergis, John D. Roberts, Frederick L. Tyson, B. Alex Merrick, and Paul A. Wade
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B cell ,DNA methylation ,Dnmt3a ,whole genome bisulfite sequencing ,gene body ,Genetics ,QH426-470 - Abstract
The DNA methyltransferase, Dnmt3a, is dynamically regulated throughout mammalian B cell development and upon activation by antigenic stimulation. Dnmt3a inactivation in hematopoietic stem cells has been shown to drive B cell-related malignancies, including chronic lymphocytic leukemia, and associates with specific DNA methylation patterns in transformed cells. However, while it is clear that inactivation of Dnmt3a in hematopoietic stem cells has profound functional effects, the consequences of Dnmt3a inactivation in cells of the B lineage are unclear. To assess whether loss of Dnmt3a at the earliest stages of B cell development lead to DNA methylation defects that might impair function, we selectively inactivated Dnmt3a early in mouse B cell development and then utilized whole genome bisulfite sequencing to generate base-resolution profiles of Dnmt3a+/+ and Dnmt3a−/− naïve splenic B cells. Overall, we find that global methylation patterns are largely consistent between Dnmt3a+/+ and Dnmt3a−/− naïve B cells, indicating a minimal functional effect of DNMT3A in mature B cells. However, loss of Dnmt3a induced 449 focal DNA methylation changes, dominated by loss-of-methylation events. Regions found to be hypomethylated in Dnmt3a−/− naïve splenic B cells were enriched in gene bodies of transcripts expressed in B cells, a fraction of which are implicated in B cell-related disease. Overall, the results from this study suggest that factors other than Dnmt3a are the major drivers for methylome maintenance in B cell development.
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- 2018
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6. GATA3 zinc finger 2 mutations reprogram the breast cancer transcriptional network
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Motoki Takaku, Sara A. Grimm, John D. Roberts, Kaliopi Chrysovergis, Brian D. Bennett, Page Myers, Lalith Perera, Charles J. Tucker, Charles M. Perou, and Paul A. Wade
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Science - Abstract
In breast cancer GATA3 is known to be frequently mutated, but the function of these mutations is unclear. Here, the authors utilise CRISPR-Cas9 to model frame-shift mutations in zinc finger 2 of GATA3, highlighting that GATA3 mutation can have gain- or loss-of function effects in breast cancer.
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- 2018
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7. An obesity-associated gut microbiome reprograms the intestinal epigenome and leads to altered colonic gene expression
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Yufeng Qin, John D. Roberts, Sara A. Grimm, Fred B. Lih, Leesa J. Deterding, Ruifang Li, Kaliopi Chrysovergis, and Paul A. Wade
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Microbiome ,Obesity ,Cancer ,Colorectal cancer ,Epigenetics ,Transcription factor ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
Abstract Background The gut microbiome, a key constituent of the colonic environment, has been implicated as an important modulator of human health. The eukaryotic epigenome is postulated to respond to environmental stimuli through alterations in chromatin features and, ultimately, gene expression. How the host mediates epigenomic responses to gut microbiota is an emerging area of interest. Here, we profile the gut microbiome and chromatin characteristics in colon epithelium from mice fed either an obesogenic or control diet, followed by an analysis of the resultant changes in gene expression. Results The obesogenic diet shapes the microbiome prior to the development of obesity, leading to altered bacterial metabolite production which predisposes the host to obesity. This microbiota–diet interaction leads to changes in histone modification at active enhancers that are enriched for binding sites for signal responsive transcription factors. These alterations of histone methylation and acetylation are associated with signaling pathways integral to the development of colon cancer. The transplantation of obesogenic diet-conditioned microbiota into germ free mice, combined with an obesogenic diet, recapitulates the features of the long-term diet regimen. The diet/microbiome-dependent changes are reflected in both the composition of the recipient animals’ microbiome as well as in the set of transcription factor motifs identified at diet-influenced enhancers. Conclusions These findings suggest that the gut microbiome, under specific dietary exposures, stimulates a reprogramming of the enhancer landscape in the colon, with downstream effects on transcription factors. These chromatin changes may be associated with those seen during colon cancer development.
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- 2018
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8. Do African American Men Have Lower Survival From Prostate Cancer Compared With White Men? A Meta-analysis
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Gayathri Sridhar MBBS, MPH, PhD, Saba W. Masho MD, MPH, Tilahun Adera MPH, PhD, Viswanathan Ramakrishnan PhD, and John D. Roberts MD
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Medicine - Abstract
Prostate cancer is the second leading cause of cancer-related mortality in men. This meta-analysis was conducted to investigate the relationship between race and survival from prostate cancer. A systematic review of articles published from 1968 to 2007 assessing survival from prostate cancer was conducted. Analysis of unadjusted studies reported that African American men have an increased risk of all-cause mortality (hazard ratio [HR] = 1.47, 95% confidence interval [CI] = 1.31-1.65, p < .001). However, examination of adjusted studies identified no difference (HR = 1.07, 95% CI = 0.94-1.22, p = .308). No statistically significant difference was observed in prostate cancer—specific survival in both analyses using unadjusted (HR = 1.11, 95% CI = 0.94-1.31, p = .209) and adjusted studies (HR = 1.15, 95% CI = 0.95-1.41, p = .157). This meta-analysis concludes that there are no racial differences in the overall and prostate cancer—specific survival between African American and White men.
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- 2010
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9. Principles for Principals: A Guide to Being a School Administrator
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John D. Roberts
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- 2021
10. Supplementary Table 1 from A Phase I Trial of Vorinostat and Alvocidib in Patients with Relapsed, Refractory, or Poor Prognosis Acute Leukemia, or Refractory Anemia with Excess Blasts-2
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Steven Grant, John D. Roberts, John Wright, Austin Doyle, Heidi Sankala, Martha D. Wellons, Ellen Shrader, Maciej Kmieciak, Renee M. McGovern, Connie Honeycutt, Mary Beth Tombes, Viswanathan Ramakrishnan, Edward Brent Perkins, Geoffrey I. Shapiro, Joel M. Reid, Matthew M. Ames, Jeffrey G. Supko, and Beata Holkova
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PDF file - 39K, Response by schedule and diagnosis.
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- 2023
11. Supplementary Table 2 from A Phase I Trial of Vorinostat and Alvocidib in Patients with Relapsed, Refractory, or Poor Prognosis Acute Leukemia, or Refractory Anemia with Excess Blasts-2
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Steven Grant, John D. Roberts, John Wright, Austin Doyle, Heidi Sankala, Martha D. Wellons, Ellen Shrader, Maciej Kmieciak, Renee M. McGovern, Connie Honeycutt, Mary Beth Tombes, Viswanathan Ramakrishnan, Edward Brent Perkins, Geoffrey I. Shapiro, Joel M. Reid, Matthew M. Ames, Jeffrey G. Supko, and Beata Holkova
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PDF file - 42K, Alvocidib pharmacokinetic parameters.
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- 2023
12. Data from Phase I Trial of Bortezomib (PS-341; NSC 681239) and 'Nonhybrid' (Bolus) Infusion Schedule of Alvocidib (Flavopiridol; NSC 649890) in Patients with Recurrent or Refractory Indolent B-cell Neoplasms
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Steven Grant, Daniel Sullivan, John D. Roberts, Domenico Coppola, William D. Figg, L. Austin Doyle, A. Dimitrios Colevas, Kevin T. Hogan, Heidi Sankala, Martha Wellons, Caryn Weir-Wiggins, Ellen Shrader, Mary Beth Tombes, Connie Honeycutt, Loveleen Kang, Jana Dawson, Cody J. Peer, Wen Wan, Viswanathan Ramakrishnan, Robert K. Stuart, G. David Roodman, Rachid C. Baz, Prithviraj Bose, E. Brent Perkins, Maciej Kmieciak, and Beata Holkova
- Abstract
Purpose: This phase I study was conducted to determine the dose-limiting toxicities (DLT) and maximum tolerated dose (MTD) for the combination of bortezomib and alvocidib in patients with B-cell malignancies (multiple myeloma, indolent lymphoma, Waldenstrom macroglobulinemia, and mantle cell lymphoma).Experimental Design: Patients received bortezomib (intravenous push), followed by alvocidib (1-hour infusion), on days 1, 4, 8, and 11 of a 21-day treatment cycle. Patients experiencing responses or stable disease continued on treatment at the investigator's discretion. A standard 3+3 dose-escalation design was used to identify the MTD based on DLTs, and pharmacokinetic and pharmacodynamic studies were conducted.Results: A total of 44 patients were enrolled, with 39 patients assessed for response. The MTD was established as 1.3 mg/m2 for bortezomib and 40 mg/m2 for alvocidib. The most common hematologic toxicities included leukopenia, lymphopenia, neutropenia, and thrombocytopenia. The most common nonhematologic toxicities included diarrhea, fatigue, and sensory neuropathy. Three complete remissions (8%) and 10 partial remissions (26%) were observed for a total response rate of 33%. Pharmacokinetic findings with the current dosing regimen were consistent with the comparable literature and the hybrid dosing regimen. Pharmacodynamic study results did not correlate with clinical responses.Conclusions: The combination of bortezomib and alvocidib is tolerable, and an MTD has been established for this schedule. The regimen appears to be efficacious in patients with relapsed/refractory multiple myeloma or indolent non-Hodgkin lymphoma. As the nonhybrid regimen is less cumbersome than the previous hybrid dosing schedule regimen, the current schedule is recommended for successor studies. Clin Cancer Res; 20(22); 5652–62. ©2014 AACR.
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- 2023
13. Data from A Phase I Trial of Vorinostat and Alvocidib in Patients with Relapsed, Refractory, or Poor Prognosis Acute Leukemia, or Refractory Anemia with Excess Blasts-2
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Steven Grant, John D. Roberts, John Wright, Austin Doyle, Heidi Sankala, Martha D. Wellons, Ellen Shrader, Maciej Kmieciak, Renee M. McGovern, Connie Honeycutt, Mary Beth Tombes, Viswanathan Ramakrishnan, Edward Brent Perkins, Geoffrey I. Shapiro, Joel M. Reid, Matthew M. Ames, Jeffrey G. Supko, and Beata Holkova
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Purpose: This phase I study was conducted to identify the maximum-tolerated dose (MTD) of alvocidib when combined with vorinostat in patients with relapsed, refractory, or poor prognosis acute leukemia, or refractory anemia with excess blasts-2. Secondary objectives included investigating the pharmacokinetic and pharmacodynamic effects of the combination.Experimental Design: Patients received vorinostat (200 mg orally, three times a day, for 14 days) on a 21-day cycle, combined with 2 different alvocidib administration schedules: a 1-hour intravenous infusion, daily × 5; or a 30-minute loading infusion followed by a 4-hour maintenance infusion, weekly × 2. The alvocidib dose was escalated using a standard 3+3 design.Results: Twenty-eight patients were enrolled and treated. The alvocidib MTD was 20 mg/m2 (30-minute loading infusion) followed by 20 mg/m2 (4-hour maintenance infusion) on days one and eight, in combination with vorinostat. The most frequently encountered toxicities were cytopenias, fatigue, hyperglycemia, hypokalemia, hypophosphatemia, and QT prolongation. Dose-limiting toxicities (DLT) were cardiac arrhythmia-atrial fibrillation and QT prolongation. No objective responses were achieved although 13 of 26 evaluable patients exhibited stable disease. Alvocidib seemed to alter vorinostat pharmacokinetics, whereas alvocidib pharmacokinetics were unaffected by vorinostat. Ex vivo exposure of leukemia cells to plasma obtained from patients after alvocidib treatment blocked vorinostat-mediated p21CIP1 induction and downregulated Mcl-1 and p-RNA Pol II for some specimens, although parallel in vivo bone marrow responses were infrequent.Conclusions: Alvocidib combined with vorinostat is well tolerated. Although disease stabilization occurred in some heavily pretreated patients, objective responses were not obtained with these schedules. Clin Cancer Res; 19(7); 1873–83. ©2013 AACR.
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- 2023
14. Data from Vorinostat and Sorafenib Synergistically Kill Tumor Cells via FLIP Suppression and CD95 Activation
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Paul Dent, Steven Grant, Paul B. Fisher, John D. Roberts, Ray Lee, Martin Graf, Adly Yacoub, David T. Curiel, Aditi Pandya Martin, Mohamed Rahmani, Hossein Hamed, Clint Mitchell, Margaret A. Park, and Guo Zhang
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Purpose and Design: Mechanism(s) by which the multikinase inhibitor sorafenib and the histone deacetylase inhibitor vorinostat interact to kill hepatic, renal, and pancreatic adenocarcinoma cells has been defined.Results: Low doses of sorafenib and vorinostat interacted in vitro in a synergistic fashion to kill hepatic, renal, and pancreatic adenocarcinoma cells in multiple short-term viability (24-96 h) and in long-term colony formation assays. Cell killing was suppressed by inhibition of cathepsin proteases and caspase-8 and, to a lesser extent, by inhibition of caspase-9. Twenty-four hours after exposure, the activities of extracellular signal-regulated kinase 1/2, AKT, and nuclear factor-κB were only modestly modulated by sorafenib and vorinostat treatment. However, 24 h after exposure, sorafenib- and vorinostat-treated cells exhibited markedly diminished expression of c-FLIP-s, full-length BID, BCL-2, BCL-XL, MCL-1, XIAP, increased expression of BIM, and increased activation of BAX, BAK, and BAD. Expression of eIF2α S51A blocked sorafenib- and vorinostat-induced suppression of c-FLIP-s levels and overexpression of c-FLIP-s abolished lethality. Sorafenib and vorinostat treatment increased surface levels of CD95 and CD95 association with caspase-8. Knockdown of CD95 or FADD expression significantly reduced sorafenib/vorinostat-mediated lethality.Conclusions: These data show that combined exposure of epithelial tumor cell types to sorafenib and vorinostat diminishes expression of multiple antiapoptotic proteins and promotes activation of the CD95 extrinsic apoptotic and the lysosomal protease pathways, and that suppression of c-FLIP-s expression represents a critical event in transduction of the proapoptotic signals from CD95 to promote mitochondrial dysfunction and death.
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- 2023
15. Supplementary Materials from Phase I Trial of Bortezomib (PS-341; NSC 681239) and 'Nonhybrid' (Bolus) Infusion Schedule of Alvocidib (Flavopiridol; NSC 649890) in Patients with Recurrent or Refractory Indolent B-cell Neoplasms
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Steven Grant, Daniel Sullivan, John D. Roberts, Domenico Coppola, William D. Figg, L. Austin Doyle, A. Dimitrios Colevas, Kevin T. Hogan, Heidi Sankala, Martha Wellons, Caryn Weir-Wiggins, Ellen Shrader, Mary Beth Tombes, Connie Honeycutt, Loveleen Kang, Jana Dawson, Cody J. Peer, Wen Wan, Viswanathan Ramakrishnan, Robert K. Stuart, G. David Roodman, Rachid C. Baz, Prithviraj Bose, E. Brent Perkins, Maciej Kmieciak, and Beata Holkova
- Abstract
Supplementary Materials. Supplemental Table 1. C1D1 alvocidib pharmacokinetics by dose Supplemental Figure 1. Sample alvocidib concentration-time profile. Samples were obtained pre-infusion, immediately following infusion, and at 1, 2, 4, 8, 12, and 24 hours post-infusion.
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- 2023
16. Data from A Phase II Trial of AZD6244 (Selumetinib, ARRY-142886), an Oral MEK1/2 Inhibitor, in Relapsed/Refractory Multiple Myeloma
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Steven Grant, Ola Landgren, Daniel Sullivan, John D. Roberts, Martha Wellons, Christina M. Annunziata, Austin Doyle, Kevin T. Hogan, Heidi Sankala, Caryn Weir-Wiggins, Ellen Shrader, Mary Beth Tombes, Wen Wan, Xiuhua Zhao, Mark Raffeld, Liqiang Xi, Michelle Herrmann, Jin-Qiu Chen, Hui-Yi Lin, Neha Korde, Rachid Baz, Peter M. Voorhees, Ashraf Z. Badros, Prithviraj Bose, Maciej Kmieciak, Adriana Zingone, and Beata Holkova
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Purpose: AZD6244 is a MEK1/2 inhibitor with significant preclinical activity in multiple myeloma cells. This phase II study used a two-stage Simon design to determine the AZD6244 response rate in patients with relapsed or refractory multiple myeloma.Experimental Design: AZD6244 (75 mg) was administered orally, twice a day, continuously for 28-day cycles. Response was evaluated after three cycles.Results: Thirty-six patients received therapy. The median age was 65 years (range: 43–81) and the median number of prior therapies was 5 (range: 2–11). The most common grade 3 and 4 toxicities included anemia, neutropenia, thrombocytopenia, diarrhea, and fatigue. Three deaths occurred possibly related to AZD6244 (2 due to sepsis, 1 due to acute kidney injury). After AZD6244 discontinuation, three additional deaths occurred due to disease progression. The response rate (CR + PR) was 5.6% with a mean duration of response of 4.95 months and median progression-free survival time of 3.52 months. One patient had a very good partial response (VGPR), 1 patient had a partial response, 17 patients had stable disease, 13 patients had progressive disease, and 4 patients could not be assessed for response. Pharmacodynamic studies revealed variable effects on bone marrow CD138+ cell MEK1/2 and ERK1/2 phosphorylation. The best clinical response, a prolonged VGPR, occurred in a patient with an MMSET translocation.Conclusions: Single-agent AZD6244 was tolerable and had minimal activity in this heavily pretreated population. Clin Cancer Res; 22(5); 1067–75. ©2015 AACR.
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- 2023
17. Supplementary Table 3 from A Phase I Trial of Vorinostat and Alvocidib in Patients with Relapsed, Refractory, or Poor Prognosis Acute Leukemia, or Refractory Anemia with Excess Blasts-2
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Steven Grant, John D. Roberts, John Wright, Austin Doyle, Heidi Sankala, Martha D. Wellons, Ellen Shrader, Maciej Kmieciak, Renee M. McGovern, Connie Honeycutt, Mary Beth Tombes, Viswanathan Ramakrishnan, Edward Brent Perkins, Geoffrey I. Shapiro, Joel M. Reid, Matthew M. Ames, Jeffrey G. Supko, and Beata Holkova
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PDF file - 41K, Pharmacokinetic parameters of vorinostat and its major metabolites.
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- 2023
18. Supplementary Methods from A Phase I Trial of Vorinostat and Alvocidib in Patients with Relapsed, Refractory, or Poor Prognosis Acute Leukemia, or Refractory Anemia with Excess Blasts-2
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Steven Grant, John D. Roberts, John Wright, Austin Doyle, Heidi Sankala, Martha D. Wellons, Ellen Shrader, Maciej Kmieciak, Renee M. McGovern, Connie Honeycutt, Mary Beth Tombes, Viswanathan Ramakrishnan, Edward Brent Perkins, Geoffrey I. Shapiro, Joel M. Reid, Matthew M. Ames, Jeffrey G. Supko, and Beata Holkova
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PDF file - 45K
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- 2023
19. Supplemental Table 1 Holkova 8631 from A Phase II Trial of AZD6244 (Selumetinib, ARRY-142886), an Oral MEK1/2 Inhibitor, in Relapsed/Refractory Multiple Myeloma
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Steven Grant, Ola Landgren, Daniel Sullivan, John D. Roberts, Martha Wellons, Christina M. Annunziata, Austin Doyle, Kevin T. Hogan, Heidi Sankala, Caryn Weir-Wiggins, Ellen Shrader, Mary Beth Tombes, Wen Wan, Xiuhua Zhao, Mark Raffeld, Liqiang Xi, Michelle Herrmann, Jin-Qiu Chen, Hui-Yi Lin, Neha Korde, Rachid Baz, Peter M. Voorhees, Ashraf Z. Badros, Prithviraj Bose, Maciej Kmieciak, Adriana Zingone, and Beata Holkova
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Supplementary Table S1. RAS/BRAF mutation status
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- 2023
20. Supplementary Data from Phase I Trial of Bortezomib (PS-341; NSC 681239) and Alvocidib (Flavopiridol; NSC 649890) in Patients with Recurrent or Refractory B-Cell Neoplasms
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Steven Grant, John D. Roberts, Daniel M. Sullivan, John Wright, Austin Doyle, Sarah Kolla, William D. Figg, Cody Peer, Robert K. Stuart, Jana Dawson, Loveleen Kang, Domenico Coppola, G. David Roodman, Kevin T. Hogan, Martha D. Wellons, Neha Talreja, Ellen Shrader, Mary Beth Tombes, Viswanathan Ramakrishnan, E. Brent Perkins, and Beata Holkova
- Abstract
Supplementary Figures S1-S2; Supplementary Tables S1-S2.
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- 2023
21. Supplementary Figures S1-S18 from Vorinostat and Sorafenib Synergistically Kill Tumor Cells via FLIP Suppression and CD95 Activation
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Paul Dent, Steven Grant, Paul B. Fisher, John D. Roberts, Ray Lee, Martin Graf, Adly Yacoub, David T. Curiel, Aditi Pandya Martin, Mohamed Rahmani, Hossein Hamed, Clint Mitchell, Margaret A. Park, and Guo Zhang
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Supplementary Figures S1-S18 from Vorinostat and Sorafenib Synergistically Kill Tumor Cells via FLIP Suppression and CD95 Activation
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- 2023
22. An interface mark-up language for web3D.
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John D. Roberts, Ilmi Yoon, Sanghyuk Yoon, and Edward Lank
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- 2004
23. Colchicine Reduces Inflammation in a Humanized Mouse Model of Sickle Cell Disease
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Raghda T Fouda, Hemanth M Cherukury, Stacy B Kiven, Natalie Garcia, Donovan A Argueta, Kalpna Gupta, and John D Roberts
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Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
24. Daily Cannabis Users with Sickle Cell Disease Show Fewer Admissions than Others with Similar Pain Complaints
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Michelle DeVeaux, Lesley Devine, Susanna A Curtis, Amanda M. Brandow, Daniel Zeltermam, and John D. Roberts
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Pharmacology ,medicine.medical_specialty ,biology ,business.industry ,Disease ,Cannabis use ,biology.organism_classification ,law.invention ,Complementary and alternative medicine ,Quality of life ,Disease severity ,Randomized controlled trial ,Opioid ,law ,Internal medicine ,Health care ,medicine ,Pharmacology (medical) ,Cannabis ,business ,Original Research ,medicine.drug - Abstract
Introduction: Previous studies have shown that cannabis use is common in adults with sickle cell disease (SCD), and that many patients report using cannabis to treat pain. Methods: We performed a cross-sectional study of adults with SCD and compared daily users of cannabis with others using validated patient-reported measures of pain and quality of life as well as opioid and health care utilization. Results: Daily cannabis users with SCD had worse pain episode severity scores than others (56.7 vs. 48.8, p=0.02) yet had 1.8 fewer annual admissions (p=0.01) and 1.2 fewer annual emergency room (ER) visits (p=0.01), and similar amounts of opioids dispensed to others after matching for age, gender, SCD genotype, hydroxyurea use, and pain impact scores. Conclusions: We show that people with SCD with more severe pain crisis are more likely to use daily cannabis, yet have lower rates of hospital admission and ER use as compared with others with similar disease severity and pain impact. Randomized controlled trials should be performed.
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- 2020
25. Medical marijuana certification for patients with sickle cell disease: a report of a single center experience
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Jonathan Spodick, Caterina P. Minniti, Susanna A Curtis, Dana Lew, John D. Roberts, and Jeanne E. Hendrickson
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Adult ,medicine.medical_specialty ,Certification ,Anemia ,MEDLINE ,Anemia, Sickle Cell ,Medical Marijuana ,Disease ,03 medical and health sciences ,Red Cells, Iron, and Erythropoiesis ,0302 clinical medicine ,Intervention (counseling) ,mental disorders ,Health care ,medicine ,Humans ,030212 general & internal medicine ,Cannabis ,Retrospective Studies ,biology ,business.industry ,Retrospective cohort study ,Hematology ,medicine.disease ,biology.organism_classification ,Family medicine ,business ,030217 neurology & neurosurgery - Abstract
More than one-third of adults with sickle cell disease (SCD) report using cannabis-based products. Many states list SCD or pain as qualifying conditions for medical marijuana, but there are few data to guide practitioners whether or whom should be certified. We postulated that certifying SCD patients may lead to a reduction in opioid use and/or health care utilization. Furthermore, we sought to identify clinical characteristics of patients who would request this intervention. Retrospective data obtained over the study period included rates of health care and opioid utilization for 6 months before certification and after certification. Patients who were certified but failed to obtain medical marijuana were compared with those who obtained it. Patients who were certified were invited to participate in a survey regarding their reasons for and thoughts on certification. Patients who were certified for medical marijuana were compared with 25 random patients who did not request certification. Fifty adults with SCD were certified for medical marijuana and 29 obtained it. Patients who obtained medical marijuana experienced a decrease in admission rates compared with those who did not and increased use of edible cannabis products. Neither group had changes in opioid use. Patients who were certified for medical marijuana had higher rates of baseline opioid use and illicit cannabis use compared with those who did not request certification. Most patients with SCD who requested medical marijuana were already using cannabis illicitly. Obtaining medical marijuana decreased inpatient hospitalizations.
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- 2020
26. Non-crisis related pain occurs in adult patients with sickle cell disease despite chronic red blood cell exchange transfusion therapy
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Joanna L. Starrels, Jeanne E. Hendrickson, Zelterman Daniel, DeVeaux Michelle, Susanna A Curtis, Devine Lesley, John D. Roberts, Amanda M. Brandow, and Balbuena-Merle Raisa
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Adult ,medicine.medical_specialty ,Erythrocytes ,medicine.medical_treatment ,Exchange transfusion ,Graft vs Host Disease ,Disease ,Anemia, Sickle Cell ,Article ,Nociceptive Pain ,Quality of life ,Internal medicine ,Acute care ,medicine ,Humans ,business.industry ,Chronic pain ,Hematology ,medicine.disease ,Analgesics, Opioid ,Opioid ,Neuropathic pain ,Propensity score matching ,Quality of Life ,business ,medicine.drug - Abstract
BACKGROUND Chronic red blood cell transfusions reduce acute care utilization for sickle cell disease (SCD) pain. However, little is known about whether chronic transfusions treat or prevent the development of non-crisis pain. We investigated patient-report of pain in adults with SCD receiving chronic exchange transfusions (CET) compared to adults not on CET with similar disease characteristics. STUDY METHOD AND DESIGN Eleven participants receiving chronic exchange transfusion (CET) for at least one year were compared to 33 participants not receiving CET. Participants completed validated patient-reported outcomes regarding pain impact and quality of life at regularly scheduled visits or before CET. One year of health care utilization and opioid prescriptions were examined. RESULTS After 1:1 propensity matching was performed for age, genotype, WBC and neutrophil counts, patients on CET had lower Pain Impact scores (-5.1, p = 0.03) and higher Neuropathic (7.4, p < 0.001) and Nociceptive Pain Quality (3.7, p < 0.001) scores, all indicating worse pain. However, CET was associated with a reduction in annual all cause admissions (-3.1, p < 0.001), length of stay (-2.1 days, p < 0.001) and ED visits (-2.7, p < 0.001). CET was not associated with differences in opioids dispensed. CONCLUSIONS After adjusting for disease characteristics, CET was associated with worse pain impact and neuropathic and nociceptive pain quality, lower health care utilization and with similar levels of opioids dispensed. This data suggest that CET may reduce hospitalizations for acute pain but may not adequately treat nociceptive or neuropathic pain in SCD.
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- 2021
27. Inpatient pain management in sickle cell disease
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Francis J Zamora, Stefanie M Zassman, and John D. Roberts
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Pharmacology ,medicine.medical_specialty ,Anemia ,business.industry ,Health Policy ,Disease ,Emergency department ,030204 cardiovascular system & hematology ,Pain management ,medicine.disease ,03 medical and health sciences ,Regimen ,0302 clinical medicine ,Blood Disorder ,Opioid ,Pain control ,Emergency medicine ,medicine ,030212 general & internal medicine ,business ,medicine.drug - Abstract
Purpose A novel strategy for management of acute pain associated with sickle cell disease (SCD), referred to as the oral tier approach, is described. Summary SCD is an inherited blood disorder characterized by episodic acute pain known as vaso-occlusive crisis (VOC), which is the most common reason for emergency department visits and hospital admissions in patients with SCD; these patients are often treated with parenteral opioids on admission and then transitioned to oral opioids prior to discharge. In this report, experience with use of the oral tier approach in 3 patients with SCD hospitalized for management of VOC is reported. As per usual practice, acute pain was initially managed with parenteral opioids via patient-controlled analgesia (PCA). Once pain control was established, an oral tier was added. The oral tier consisted of 3 orders. The first order was for an oral opioid, to be administered every 3 hours on a scheduled basis; however, the patient could refuse 1 or more of these scheduled doses. Two additional orders specified that the patients could receive additional oral opioids in incremental doses for moderate (grade 4–7) or severe (grade 8–10) pain if appropriate. To facilitate transition to an oral regimen with which the patients might be discharged, they were encouraged to use oral opioids in preference to parenteral opioids. Opioid usage and average daily pain scores for the 3 patients are reported. Conclusion Healthcare providers can use the oral tier approach to facilitate rapid inpatient conversion from i.v. PCA to oral opioids while providing adequate pain control in patients with SCD who develop VOC.
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- 2019
28. Prescription Opioid Misuse Index in sickle cell patients: A brief questionnaire to assess at-risk for opioid abuse
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Wally R. Smith, MD, Donna K. McClish, PhD, John D. Roberts, MD, Osama Kandalaft, MD, Bassam Dahman, PhD, Janet Knisely, PhD, James Levenson, MD, Susan Roseff, MD, and Imo P. Aisiku, MD
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Anesthesiology and Pain Medicine ,Pharmacology (medical) ,General Medicine - Abstract
Objective: To develop a survey instrument to identify adult sickle cell disease (SCD) patients on chronic opioid therapy who are at-risk for opioid abuse. Design: Prospective survey and interview.Setting: Adult SCD clinic in a large urban teaching facility.Patients/participants: Convenience sampling of adult patients presenting to the sickle cell clinic.Interventions: None.Main outcome: Primary outcome was “at-risk for opioid misuse,” defined as at least 3/8 “yes” answers (a positive composite score) on the Prescription Opioid Misuse Index (POMI) questionnaire. Secondary outcome was DSM-IV criteria for substance abuse using the DSM IV Diagnostic Interview Schedule.Results: Of the 99 patients who completed the POMI, the mean age was 36 years; 58.6 percent were female, 48 percent were hemoglobin SS (47/99), and 26 percent were SC (26/99). Twenty-four percent (24/99) were identified as at-risk for opioid misuse using the POMI. There were no differences in demographic, SCD genotype, or socioeconomic variables for at-risk versus not-at-risk patients.Conclusion: Twenty-four percent of unselected adult SCD patients on opioids were identified as at-risk for opioid misuse using a quick survey. This may represent as much as 2.5-7 times the national misuse rate. This group of patients may benefit from additional diagnostic and therapeutic interventions to help understand and manage their opioid usage.
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- 2019
29. Phase 1 study of belinostat (PXD-101) and bortezomib (Velcade, PS-341) in patients with relapsed or refractory acute leukemia and myelodysplastic syndrome
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Prithviraj Bose, Guillermo Garcia-Manero, Wen Wan, John D. Roberts, Sandeep S. Dave, Elizabeth B. Collins, Steven Grant, Ellen Shrader, Victor Yazbeck, Caryn Weir, Dipankar Bandyopadhyay, Maciej Kmieciak, Amanda Garnett, Danielle Shafer, Mary Beth Tombes, and Beata Holkova
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Oncology ,Adult ,Cancer Research ,medicine.medical_specialty ,Blast Crisis ,Phases of clinical research ,Hydroxamic Acids ,Article ,Bortezomib ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Refractory ,Internal medicine ,hemic and lymphatic diseases ,Antineoplastic Combined Chemotherapy Protocols ,Medicine ,Humans ,In patient ,neoplasms ,Acute leukemia ,Sulfonamides ,Adult patients ,business.industry ,Hematology ,Leukemia, Myeloid, Acute ,Treatment Outcome ,chemistry ,030220 oncology & carcinogenesis ,Myelodysplastic Syndromes ,business ,Belinostat ,030215 immunology ,medicine.drug - Abstract
We report the results of a phase 1 dose-escalation study of belinostat and bortezomib in adult patients with acute leukemia or MDS or CML with blast crisis. Thirty-eight patients received IV belinostat days 1-5 and 8-12 with IV bortezomib days 1, 4, 8, and 11 every 21 days. QTc prolongation was the only identified DLT. The RP2Ds were 1.3 mg/m(2) bortezomib and 1000 mg/m(2) belinostat. One patient with highly refractory MLL-ENL rearranged biphenotypic AML with multiple karyotypic aberrations had a complete pathologic and karyotypic response. One patient with post-MPN AML remained on study with stable disease (SD) for 32 cycles. Whole-exome sequencing revealed no aberrations in the first patient and a hyper-mutator genotype in the second. Eighteen patients had a best response of SD. We conclude that this treatment strategy is feasible but has limited activity in this population. Nevertheless, the factors that predict exceptional responses to this strategy warrant further investigation.
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- 2020
30. Urinary cannabinoid mass spectrometry profiles differentiate dronabinol from cannabis use
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Joe M. El-Khoury, Christopher D. Koch, John D. Roberts, Liang Xu, Dustin R. Bunch, and Susanna A Curtis
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0301 basic medicine ,Nausea ,Cannabigerol ,medicine.medical_treatment ,Metabolite ,Clinical Biochemistry ,Urine ,Pharmacology ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Tandem Mass Spectrometry ,mental disorders ,medicine ,Humans ,Dronabinol ,Prospective Studies ,Cannabis ,biology ,business.industry ,Cannabinoids ,organic chemicals ,Biochemistry (medical) ,General Medicine ,biology.organism_classification ,Substance Abuse Detection ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,Cannabinoid ,medicine.symptom ,business ,Cannabidiol ,medicine.drug ,Chromatography, Liquid - Abstract
Background Dronabinol is used to treat a variety of conditions, including loss of appetite in people with AIDS and severe nausea and vomiting caused by cancer chemotherapy. Its therapeutic potential for pain management is now being explored in specific populations. Monitoring dronabinol compliance is challenging because its active ingredient, Δ-9-tetrahydrocannabinol (THC), is also present in cannabis. We developed a rapid LC-MS/MS assay with minimal specimen preparation to quantitate 11 cannabinoids in urine. Using this assay coupled with urine samples from normal controls, cannabis, and dronabinol users, we show the ability to differentiate cannabis from dronabinol use. Methods Residual clinical urine samples from 55 cannabinoid positive subjects and 31 negative controls, as well as prospective samples from 5 patients receiving dronabinol therapy were obtained for analysis. Results In the dronabinol group, only the THC metabolites 11-nor-9-carboxy-tetrahydrocannabinol (THC-COOH) and 11-hydroxy-Δ-9-tetrahydrocannabinol (THC-OH) were detected. Minor cannabinoids were detected in 91% of cannabis group samples and their detection was more frequent in samples with increased THC metabolite concentrations. Of minor cannabinoids evaluated, cannabigerol (CBG) and cannabidiol (CBD) had the greatest sensitivity in detecting cannabis use. Conclusions This method has a high sensitivity for the detection of cannabis use with implications for evaluating dronabinol compliance.
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- 2020
31. Tunable hyperbolic plasmons of carbon nanotube metamaterials (Conference Presentation)
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John D. Roberts, Shang-Jie Yu, Po-Hsun Ho, Jonathan A. Fan, Stefan Schoeche, and Abram L. Falk
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Materials science ,business.industry ,Physics::Optics ,Metamaterial ,Thermal emission ,Carbon nanotube ,Photodetection ,law.invention ,Condensed Matter::Materials Science ,Resonator ,Ellipsometry ,law ,Optoelectronics ,Spectroscopic ellipsometry ,business ,Plasmon - Abstract
We show that self-assembled films of horizontally aligned carbon nanotubes are a electrostatically tunable hyperbolic metamaterial using spectroscopic ellipsometry. We map the hyperbolic dispersion of plasmonic modes in aligned carbon nanotube films using transmission measurements of nanoribbon resonators and find good agreement with a theoretical model based on the optical properties dervied from the ellipsometry. Self-assembled films of carbon nanotubes are well-suited for applications in thermal emission and photodetection, and they serve as model systems for studying light–matter interactions in the deep subwavelength regime.
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- 2020
32. Using age-based life history data to investigate the life cycle and vulnerability of Octopus cyanea.
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Jade N Herwig, Martial Depczynski, John D Roberts, Jayson M Semmens, Monica Gagliano, and Andrew J Heyward
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Medicine ,Science - Abstract
Octopus cyanea is taken as an unregulated, recreationally fished species from the intertidal reefs of Ningaloo, Western Australia. Yet despite its exploitation and importance in many artisanal fisheries throughout the world, little is known about its life history, ecology and vulnerability. We used stylet increment analysis to age a wild O. cyanea population for the first time and gonad histology to examine their reproductive characteristics. O. cyanea conforms to many cephalopod life history generalisations having rapid, non-asymptotic growth, a short life-span and high levels of mortality. Males were found to mature at much younger ages and sizes than females with reproductive activity concentrated in the spring and summer months. The female dominated sex-ratios in association with female brooding behaviours also suggest that larger conspicuous females may be more prone to capture and suggests that this intertidal octopus population has the potential to be negatively impacted in an unregulated fishery. Size at age and maturity comparisons between our temperate bordering population and lower latitude Tanzanian and Hawaiian populations indicated stark differences in growth rates that correlate with water temperatures. The variability in life history traits between global populations suggests that management of O. cyanea populations should be tailored to each unique set of life history characteristics and that stylet increment analysis may provide the integrity needed to accurately assess this.
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- 2012
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33. Marijuana Use in Adults Living with Sickle Cell Disease
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Susanna A Curtis, John D. Roberts, Joanna Cole, Ariadna Forray, Jonathan Spodick, and Janis Bozzo
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Drug ,medicine.medical_specialty ,media_common.quotation_subject ,Disease ,Recreational use ,Tertiary care ,Article ,medical marijuana ,03 medical and health sciences ,0302 clinical medicine ,Marijuana use ,030202 anesthesiology ,mental disorders ,medicine ,Drug test ,Pharmacology (medical) ,030212 general & internal medicine ,media_common ,Pharmacology ,medicine.diagnostic_test ,business.industry ,cannabinoid ,Complementary and alternative medicine ,Family medicine ,sickle cell disease ,business ,marijuana - Abstract
Introduction: Legal access to marijuana, most frequently as “medical marijuana,” is becoming more common in the United States, but most states do not specify sickle cell disease as a qualifying condition. We were aware that some of our patients living with sickle cell disease used illicit marijuana, and we sought more information about this. Materials and Methods: We practice at an urban, academic medical center and provide primary, secondary, and tertiary care for ∼130 adults living with sickle cell disease. We surveyed our patients with a brief, anonymous, paper-and-pen instrument. We reviewed institutional records for clinically driven urine drug testing. We tracked patient requests for certification for medical marijuana. Results: Among 58 patients surveyed, 42% reported marijuana use within the past 2 years. Among users, most endorsed five medicinal indications; a minority reported recreational use. Among 57 patients who had at least one urine drug test, 18% tested positive for cannabinoids only, 12% tested positive for cocaine and/or phencyclidine only, and 5% tested positive for both cannabinoids and cocaine/phencyclidine. Subsequent to these studies, sickle cell disease became a qualifying condition for medical marijuana in our state. In the interval ∼1.5 years, 44 patients have requested certification. Conclusion: Our findings and those of others create a rationale for research into the possible therapeutic effects of marijuana or cannabinoids, the presumed active constituents of marijuana, in sickle cell disease. Explicit inclusion of sickle cell disease as a qualifying condition for medical marijuana might reduce illicit marijuana use and related risks and costs to both persons living with sickle cell disease and society.
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- 2018
34. Sulfonamides as Selective NaV1.7 Inhibitors: Optimizing Potency, Pharmacokinetics, and Metabolic Properties to Obtain Atropisomeric Quinolinone (AM-0466) that Affords Robust in Vivo Activity
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Jessica Able, Benjamin C. Milgram, Loren Berry, Melanie Cooke, Liyue Huang, John Butler, Hongbing Huang, Violeta Yu, Kristin Taborn, John D. Roberts, Steven Altmann, Margaret Y. Chu-Moyer, John Yeoman, Jean Wang, Roman Shimanovich, Russell Graceffa, Matthew Weiss, Thomas Kornecook, Christopher P Ilch, Bryan D. Moyer, Christiane Boezio, Isaac E. Marx, Brian A. Sparling, Emily A. Peterson, Gwen Rescourio, Charles Kreiman, Elma Feric Bojic, Karina R. Vaida, Angel Guzman-Perez, Dawn Zhu, Hua Gao, Laurie B. Schenkel, Michael Jarosh, Hanh Nho Nguyen, Joseph Ligutti, Alessandro Boezio, Hakan Gunaydin, Daniel S. La, Thomas Dineen, Robert T. Fremeau, Robert S. Foti, Min-Hwa Jasmine Lin, Erin F. DiMauro, and John Stellwagen
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0301 basic medicine ,chemistry.chemical_classification ,Bicyclic molecule ,CYP3A4 ,Stereochemistry ,Chemistry ,Sodium channel ,Sulfonamide ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,In vivo ,Drug Discovery ,Molecular Medicine ,Structure–activity relationship ,Selectivity ,CYP2C9 ,030217 neurology & neurosurgery - Abstract
Because of its strong genetic validation, NaV1.7 has attracted significant interest as a target for the treatment of pain. We have previously reported on a number of structurally distinct bicyclic heteroarylsulfonamides as NaV1.7 inhibitors that demonstrate high levels of selectivity over other NaV isoforms. Herein, we report the discovery and optimization of a series of atropisomeric quinolinone sulfonamide inhibitors [Bicyclic sulfonamide compounds as sodium channel inhibitors and their preparation. WO 2014201206, 2014] of NaV1.7, which demonstrate nanomolar inhibition of NaV1.7 and exhibit high levels of selectivity over other sodium channel isoforms. After optimization of metabolic and pharmacokinetic properties, including PXR activation, CYP2C9 inhibition, and CYP3A4 TDI, several compounds were advanced into in vivo target engagement and efficacy models. When tested in mice, compound 39 (AM-0466) demonstrated robust pharmacodynamic activity in a NaV1.7-dependent model of histamine-induced pruritus (i...
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- 2017
35. Comorbidity, Pain, Utilization, and Psychosocial Outcomes in Older versus Younger Sickle Cell Adults: The PiSCES Project
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Susan D. Roseff, Imoigele P. Aisiku, John D. Roberts, Wally R. Smith, Donna K. McClish, James L. Levenson, and Viktor E. Bovbjerg
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Adult ,Male ,medicine.medical_specialty ,Coping (psychology) ,Adolescent ,Article Subject ,Psychological intervention ,lcsh:Medicine ,Pain ,Anemia, Sickle Cell ,Comorbidity ,General Biochemistry, Genetics and Molecular Biology ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Epidemiology ,Health care ,Humans ,Medicine ,030212 general & internal medicine ,Young adult ,General Immunology and Microbiology ,business.industry ,lcsh:R ,Age Factors ,General Medicine ,Middle Aged ,Patient Acceptance of Health Care ,medicine.disease ,3. Good health ,030220 oncology & carcinogenesis ,Physical therapy ,Female ,Pain catastrophizing ,business ,Psychosocial ,Research Article - Abstract
Background. Patients with SCD now usually live well into adulthood. Whereas transitions into adulthood are now often studied, little is published about aging beyond the transition period. We therefore studied age-associated SCD differences in utilization, pain, and psychosocial variables.Methods. Subjects were 232 adults in the Pain in Sickle Cell Epidemiology Study (PiSCES). Data included demographics, comorbidity, and psychosocial measures. SCD-related pain and health care utilization were recorded in diaries. We compared 3 age groups: 16–25 (transition), 26–36 (younger adults), and 37–64 (older adults) years.Results. Compared to the 2 adult groups, the transition group reported fewer physical challenges via comorbidities, somatic complaints, and pain frequency, though pain intensity did not differ on crisis or noncrisis pain days. The transition group utilized opioids less often, made fewer ambulatory visits, and had better quality of life, but these differences disappeared after adjusting for pain and comorbidities. However, the transition group reported more use of behavioral coping strategies.Conclusion. We found fewer biological challenges, visits, and better quality of life, in transition-aged versus older adults with SCD, but more behavioral coping. Further study is required to determine whether age-appropriate health care, behavioral, or other interventions could improve age-specific life challenges of patients with SCD.
- Published
- 2017
36. Red blood cell alloimmunization is associated with lower expression of FcγR1 on monocyte subsets in patients with sickle cell disease
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Matthew S. Karafin, Chance John Luckey, Susanna A Curtis, Alexa J. Siddon, David R Gibb, Raisa Balbuena-Merle, Lesley Devine, John D. Roberts, Jeanne E. Hendrickson, and Christopher A. Tormey
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Adult ,Male ,Erythrocytes ,Anemia ,CD14 ,Immunology ,Anemia, Sickle Cell ,030204 cardiovascular system & hematology ,CD16 ,Article ,Monocytes ,Flow cytometry ,03 medical and health sciences ,0302 clinical medicine ,Isoantibodies ,Immunology and Allergy ,Medicine ,Humans ,Clinical significance ,Receptor ,Aged ,Autoantibodies ,CD64 ,Aged, 80 and over ,CD11b Antigen ,medicine.diagnostic_test ,business.industry ,Receptors, IgG ,Hematology ,Middle Aged ,medicine.disease ,Red blood cell ,medicine.anatomical_structure ,Cytokines ,Female ,business ,030215 immunology - Abstract
Background Despite the clinical significance of red blood cell (RBC) alloantibodies, there are currently no laboratory tests available to predict which patients may be at risk of antibody formation after transfusion exposure. Given their phagocytic and inflammatory functions, we hypothesized that differences in circulating monocytes may play a role in alloimmunization. Study design and methods Forty-two adults with sickle cell disease (SCD) were recruited, with data extracted from the electronic medical record and peripheral blood analyzed by flow cytometry for total monocytes, monocyte subsets (CD14 high/CD16 low+ classical monocytes, CD14 high/CD16 high+ intermediate monocytes, and CD14 intermediate/CD16 high+ non-classical/inflammatory monocytes), and FcγR1 (CD64) expression. Thirteen "non-responder" patients (non-alloimmunized patients with documented RBC transfusion at the study institution) were compared to 20 alloimmunized "responder" patients, who had a total of 44 RBC alloantibodies identified. Results There were no significant differences in the percentages of total monocytes, monocyte subsets, or measured cytokines between non-responders and responders. However, non-responders had higher CD64 expression on classical monocytes (MFI mean 3424 ± standard deviation 1141) compared to responders (MFI mean 2285 ± 1501), p = 0.029, and on intermediate monocytes (MFI mean 3720 ± 1191) compared to responders (MFI mean 2497 ± 1640), p = 0.033. Conclusions Monocytes and the inflammatory milieu increasingly are being appreciated to play a role in some complications of SCD. The differences in FcγR1 expression on monocyte subsets noted between responders and non-responders, which cannot be directly explained by the serum cytokines evaluated, warrant further investigation.
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- 2019
37. Phase I Study of Sorafenib and Vorinostat in Advanced Hepatocellular Carcinoma
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Ellen Shrader, Prithviraj Bose, Hannah M. Lee, John D. Roberts, Richard K. Sterling, Mary Beth Tombes, Xiaoyan Deng, Dipankar Bandyopadhyay, Maciej Kmieciak, Paul Dent, Tri K. Nguyen, Andrew Poklepovic, Sarah W. Gordon, William P. McGuire, Scott Matherly, Alison A. Ryan, and Danielle Shafer
- Subjects
Sorafenib ,Oncology ,Male ,Cancer Research ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,Hypophosphatemia ,Hypokalemia ,urologic and male genital diseases ,03 medical and health sciences ,0302 clinical medicine ,Therapeutic index ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,Carcinoma ,medicine ,Humans ,heterocyclic compounds ,030212 general & internal medicine ,neoplasms ,Vorinostat ,Aged ,business.industry ,Liver Neoplasms ,Middle Aged ,medicine.disease ,Thrombocytopenia ,female genital diseases and pregnancy complications ,digestive system diseases ,Phase i study ,Clinical trial ,030220 oncology & carcinogenesis ,Hepatocellular carcinoma ,Female ,Histone deacetylase ,Drug Eruptions ,Chemical and Drug Induced Liver Injury ,business ,medicine.drug - Abstract
Preclinical data suggest histone deacetylase inhibitors improve the therapeutic index of sorafenib. A phase I study was initiated to establish the recommended phase 2 dose of sorafenib combined with vorinostat in patients with unresectable hepatocellular carcinoma.Patients received vorinostat (200 to 400 mg by mouth once daily, 5 of 7 d) and sorafenib at standard or reduced doses (400 mg [cohort A] or 200 mg [cohort B] by mouth twice daily). Patients who received 14 days of vorinostat in cycle 1 were evaluable for dose-limiting toxicity (DLT).Sixteen patients were treated. Thirteen patients were evaluable for response. Three patients experienced DLTs, 2 in cohort A (grade [gr] 3 hypokalemia; gr 3 maculopapular rash) and 1 in cohort B (gr 3 hepatic failure; gr 3 hypophosphatemia; gr 4 thrombocytopenia). Eleven patients required dose reductions or omissions for non-DLTtoxicity. Ten patients (77%) had stable disease (SD). The median treatment duration was 4.7 months for response-evaluable patients. One patient with SD was on treatment for 29.9 months, and another patient, also with SD, was on treatment for 18.7 months. Another patient electively stopped therapy after 15 months and remains without evidence of progression 3 years later.Although some patients had durable disease control, the addition of vorinostat to sorafenib led to toxicities in most patients, requiring dose modifications that prevented determination of the recommended phase 2 dose. The combination is not recommended for further exploration with this vorinostat schedule in this patient population.
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- 2019
38. Phase I study of pemetrexed with sorafenib in advanced solid tumors
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Charles E. Geyer, Ellen Shrader, Prithviraj Bose, Maciej Kmieciak, Maria Quigley, John D. Roberts, Katie Strickler, Wen Wan, Mary Beth Tombes, H. Davis Massey, Danielle Shafer, Paul Dent, William P. McGuire, Andrew Poklepovic, Sarah W. Gordon, Laurence Booth, and Richard G. Moran
- Subjects
Adult ,Male ,Niacinamide ,0301 basic medicine ,Sorafenib ,Gerontology ,medicine.medical_specialty ,Maximum Tolerated Dose ,Antineoplastic Agents ,Triple Negative Breast Neoplasms ,Pemetrexed ,Cohort Studies ,Dose schedule ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Neoplasms ,Antineoplastic Combined Chemotherapy Protocols ,Biomarkers, Tumor ,Humans ,Medicine ,Dosing ,Aged ,Inflammation ,business.industry ,Phenylurea Compounds ,General surgery ,PTEN Phosphohydrolase ,clinical trial ,solid tumors ,Middle Aged ,medicine.disease ,humanities ,3. Good health ,Phase i study ,Clinical trial ,Treatment Outcome ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cohort ,Female ,Clinical Research Paper ,business ,medicine.drug - Abstract
// Andrew Poklepovic 1, 2 , Sarah Gordon 2 , Danielle A. Shafer 1, 2 , John D. Roberts 1, 2, 7 , Prithviraj Bose 1, 2, 8 , Charles E. Geyer Jr. 1, 2 , William P. McGuire 1, 2 , Mary Beth Tombes 1 , Ellen Shrader 1 , Katie Strickler 1 , Maria Quigley 1 , Wen Wan 1, 3 , Maciej Kmieciak 1 , H. Davis Massey 4 , Laurence Booth 5 , Richard G. Moran 1, 6 , Paul Dent 1, 5 1 Department of Massey Cancer Center, Virginia Commonwealth University, Richmond, Virginia, USA 2 Department of Internal Medicine, Virginia Commonwealth University, Richmond, Virginia, USA 3 Department of Biostatistics, Virginia Commonwealth University, Richmond, Virginia, USA 4 Department of Pathology, Virginia Commonwealth University, Richmond, Virginia, USA 5 Department of Biochemistry and Molecular Biology, Virginia Commonwealth University, Richmond, Virginia, USA 6 Department of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, Virginia, USA 7 Current address: Department of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA 8 Current address: Department of Leukemia, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA Correspondence to: Andrew Poklepovic, email: andrew.poklepovic@vcuhealth.org Keywords: clinical trial, pemetrexed, solid tumors, sorafenib Received: February 26, 2016 Accepted: April 16, 2016 Published: May 18, 2016 ABSTRACT Purpose: To determine if combination treatment with pemetrexed and sorafenib is safe and tolerable in patients with advanced solid tumors. Results: Thirty-seven patients were enrolled and 36 patients were treated (24 in cohort A; 12 in cohort B). The cohort A dose schedule resulted in problematic cumulative toxicity, while the cohort B dose schedule was found to be more tolerable. The maximum tolerated dose (MTD) was pemetrexed 750 mg/m 2 every 14 days with oral sorafenib 400 mg given twice daily on days 1–5. Because dosing delays and modifications were associated with the MTD, the recommended phase II dose was declared to be pemetrexed 500 mg/m 2 every 14 days with oral sorafenib 400 mg given twice daily on days 1–5. Thirty-three patients were evaluated for antitumor activity. One complete response and 4 partial responses were observed (15% overall response rate). Stable disease was seen in 15 patients (45%). Four patients had a continued response at 6 months, including 2 of 5 patients with triple-negative breast cancer. Experimental Design: A phase I trial employing a standard 3 + 3 design was conducted in patients with advanced solid tumors. Cohort A involved a novel dose escalation schema exploring doses of pemetrexed every 14 days with continuous sorafenib. Cohort B involved a modified schedule of sorafenib dosing on days 1–5 of each 14-day pemetrexed cycle. Radiographic assessments were conducted every 8 weeks. Conclusions: Pemetrexed and intermittent sorafenib therapy is a safe and tolerable combination for patients, with promising activity seen in patients with breast cancer.
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- 2016
39. A phase I study of indoximod in patients with advanced malignancies
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David Noyes, Scott J. Antonia, Richard Lush, Anthony Neuger, Mario R. Mautino, Hatem Soliman, Hyo S. Han, Alberto Chiappori, John D. Roberts, Charles J. Link, Howard Streicher, Nicholas N. Vahanian, Fatema Khambati, Daniel M. Sullivan, Roohi Ismail-Khan, and Susan Minton
- Subjects
Adult ,Male ,0301 basic medicine ,medicine.medical_specialty ,Maximum Tolerated Dose ,Hypophysitis ,medicine.medical_treatment ,Cmax ,Antineoplastic Agents ,3 dioxygenase ,Gastroenterology ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Pharmacokinetics ,Neoplasms ,Internal medicine ,1-methyl-D-tryptophan ,medicine ,Humans ,Indoleamine-Pyrrole 2,3,-Dioxygenase ,Aged ,Aged, 80 and over ,Chemotherapy ,Dose-Response Relationship, Drug ,biology ,business.industry ,C-reactive protein ,Tryptophan ,Cancer ,immunomodulator ,Immunosuppression ,Middle Aged ,medicine.disease ,3. Good health ,030104 developmental biology ,indoximod ,Oncology ,030220 oncology & carcinogenesis ,Immunology ,Toxicity ,biology.protein ,indoleamine 2 ,Female ,Clinical Research Paper ,business - Abstract
// hatem h. soliman 1 , susan e. minton 1 , hyo sook han 1 , roohi ismail-khan 1 , anthony neuger 1 , fatema khambati 1 , david noyes 1 , richard lush 1 , alberto a. chiappori 1 , john d. roberts 2 , charles link 3 , nicholas n. vahanian 3 , mario mautino 3 , howard streicher 4 , daniel m. sullivan 1 and scott j. antonia 1 1 h. lee moffitt cancer center and research institute, tampa, florida, usa 2 massey cancer center, virginia commonwealth university, richmond, virginia, usa 3 newlink genetics inc., ames, iowa, usa 4 cancer therapeutics evaluation program, national cancer institute, bethesda, maryland, usa correspondence to: hatem h. soliman, email: // keywords : indoleamine 2,3 dioxygenase, 1-methyl-d-tryptophan, indoximod, immunomodulator received : february 11, 2016 accepted : march 10, 2016 published : march 20, 2016 abstract purpose: indoximod is an oral inhibitor of the indoleamine 2,3-dioxygenase pathway, which causes tumor-mediated immunosuppression. primary endpoints were maximum tolerated dose (mtd) and toxicity for indoximod in patients with advanced solid tumors. secondary endpoints included response rates, pharmacokinetics, and immune correlates. experimental design: our 3+3 phase i trial comprised 10 dose levels (200, 300, 400, 600, and 800 mg once/day; 600, 800, 1200, 1600, and 2000 mg twice/day). inclusion criteria were measurable metastatic solid malignancy, age ≥18 years, and adequate organ/marrow function. exclusion criteria were chemotherapy ≤ 3 weeks prior, untreated brain metastases, autoimmune disease, or malabsorption. results: in 48 patients, mtd was not reached at 2000 mg twice/day. at 200 mg once/day, 3 patients previously treated with checkpoint inhibitors developed hypophysitis. five patients showed stable disease >6 months. indoximod plasma auc and cmax plateaued above 1200mg. cmax (~12 μm at 2000 mg twice/day) occurred at 2.9 hours, and half-life was 10.5 hours. c reactive protein (crp) levels increased across multiple dose levels. conclusions: indoximod was safe at doses up to 2000 mg orally twice/day. best response was stable disease >6 months in 5 patients. induction of hypophysitis, increased tumor antigen autoantibodies and crp levels were observed.
- Published
- 2016
40. Phase II trial of dasatinib for recurrent or metastatic c-KIT expressing adenoid cystic carcinoma and for nonadenoid cystic malignant salivary tumors
- Author
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Ezra E.W. Cohen, Frank Worden, David N. Hayes, Heinz-Josef Lenz, Albiruni Ryan Abdul Razak, John D. Roberts, Nabil F. Saba, Kevin J. Cullen, D. Lim, Naoko Takebe, Merrill S. Kies, Jill Gilbert, Athanassios Argiris, Tawee Tanvetyanon, Theodore Karrison, Stuart J. Wong, and Everett E. Vokes
- Subjects
Male ,0301 basic medicine ,medicine.medical_treatment ,Dasatinib ,Phases of clinical research ,Gastroenterology ,0302 clinical medicine ,80 and over ,Medicine ,adenoid cystic carcinoma ,Adenoid Cystic ,Cancer ,Aged, 80 and over ,Hematology ,Middle Aged ,phase II ,Salivary Gland Neoplasms ,Carcinoma, Adenoid Cystic ,Proto-Oncogene Proteins c-kit ,Treatment Outcome ,Local ,Oncology ,6.1 Pharmaceuticals ,030220 oncology & carcinogenesis ,Vomiting ,Female ,medicine.symptom ,medicine.drug ,Adult ,malignant salivary gland cancer ,medicine.medical_specialty ,Nausea ,Adenoid cystic carcinoma ,Oncology and Carcinogenesis ,Antineoplastic Agents ,Neutropenia ,Disease-Free Survival ,Vaccine Related ,Young Adult ,03 medical and health sciences ,Clinical Research ,Internal medicine ,Humans ,Oncology & Carcinogenesis ,Dental/Oral and Craniofacial Disease ,Adverse effect ,Protein Kinase Inhibitors ,Aged ,Chemotherapy ,business.industry ,Carcinoma ,Evaluation of treatments and therapeutic interventions ,Original Articles ,medicine.disease ,Surgery ,Neoplasm Recurrence ,030104 developmental biology ,Neoplasm Recurrence, Local ,cKIT ,Digestive Diseases ,business - Abstract
Background Adenoid cystic carcinoma (ACC) is a subtype of malignant salivary gland tumors (MSGT), in which 90% of cases express cKIT. Dasatinib is a potent and selective inhibitor of five oncogenic protein tyrosine kinases (PTKs)/kinase families including cKIT. We conducted a phase II study to determine the antitumor activity of dasatinib in ACC and non-ACC MSGT. Patients and methods In a two-stage design, patients with progressive, recurrent/metastatic ACC (+cKIT) and non-ACC MSGT (separate cohort) were treated with dasatinib 70 mg p.o. b.i.d. Response was assessed every 8 weeks using RECIST. Results Of 54 patients: 40 ACC, 14 non-ACC (1, ineligible excluded); M:F = 28:26, median age 56 years (range 20–82 years), ECOG performance status 0:1:2 = 24:28:2, prior radiation: 44, prior chemotherapy: 21. The most frequent adverse events (AEs) (as % of patients, worst grade 2 or higher) were: fatigue (28%), nausea (19%), headache (15%), lymphopenia (7%), dyspnea (11%), alanine aminotransferase increased (7%), anorexia (7%), vomiting (7%), alkaline phosphatase increased (6%), diarrhea (6%), neutropenia (6%), and noncardiac chest pain (6%). No grade 4 AE occurred, 15 patients experienced a grade 3 AE, primarily dyspnea (5) and fatigue (4), and cardiac toxicity (1 prolonged QTc). Among ACC patients, best response to dasatinib: 1 patient (2.5%) had partial response, 20 patients (50%) had stable disease (SD) (3–14 months), 12 patients (30%) had PD, 2 withdrew, 3 discontinued therapy due to AE, and 2 died before cycle 2. Median progression-free survival was 4.8 months. Median overall survival was 14.5 months. For 14 assessable non-ACC patients, none had objective response, triggering early stopping rule. Seven had SD (range 1–7 months), 4 PD, 2 discontinued therapy due to AE, and 1 died before cycle 2. Conclusion Although there was only one objective response, dasatinib is well tolerated, with tumor stabilization achieved by 50% of ACC patients. Dasatinib demonstrated no activity in non-ACC MSGT.
- Published
- 2016
41. Utilization, financial outcomes and stakeholder perspectives of a re-organized adult sickle cell program
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Constance Smith, Kathleen Kenyon, John D. Roberts, Vivek Parwani, Susanna A Curtis, Jack Gorero, Daniel F. Weisberg, Ariadna Forray, Joanna Cole, Janis Bozzo, and Robert Rousseau
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Male ,Critical Care and Emergency Medicine ,Medical Doctors ,Health Care Providers ,Nurses ,Disease ,Hospitals, University ,0302 clinical medicine ,Acute care ,Outpatients ,Health care ,Medicine and Health Sciences ,Ambulatory Care ,Medical Personnel ,030212 general & internal medicine ,Analgesics ,Multidisciplinary ,Chronic pain ,Drugs ,Hematology ,Analgesics, Opioid ,Hospitalization ,Professions ,Genetic Diseases ,Costs and Cost Analysis ,Medicine ,Female ,0305 other medical science ,Research Article ,Adult ,medicine.medical_specialty ,Patients ,Science ,Specialty ,MEDLINE ,Context (language use) ,Anemia, Sickle Cell ,03 medical and health sciences ,Autosomal Recessive Diseases ,Physicians ,medicine ,Pain Management ,Humans ,Pharmacology ,Clinical Genetics ,Inpatients ,Sickle Cell Disease ,030505 public health ,Primary Health Care ,business.industry ,Emergency department ,medicine.disease ,Opioids ,Health Care ,Hemoglobinopathies ,Patient Outcome Assessment ,Socioeconomic Factors ,Family medicine ,People and Places ,Population Groupings ,business - Abstract
In 2011 Yale New Haven Hospital, in response to high utilization of acute care services and widespread patient and health care personnel dissatisfaction, set out to improve its care of adults living with sickle cell disease. Re-organization components included recruitment of additional personnel; re-locating inpatients to a single nursing unit; reducing the number of involved providers; personalized care plans for pain management; setting limits upon access to parenteral opioids; and an emphasis upon clinic visits focused upon home management of pain as well as specialty and primary care. Outcomes included dramatic reductions in inpatient days (79%), emergency department visits (63%), and hospitalizations (53%); an increase in outpatient visits (31%); and a decrease in costs (49%). Providers and nurses viewed the re-organization and outcomes positively. Most patients reported improvements in pain control and life style; many patients thought the re-organization process was unfair. Their primary complaint was a lack of shared decision-making. We attribute the contrast in these perspectives to the inherent difficulties of managing recurrent acute and chronic pain with opioids, especially within the context of the imbalance in wellness, power, and privilege between persons living with sickle cell disease, predominantly persons of color and poor socio-economic status, and health care organizations and their personnel.
- Published
- 2020
42. Correction: The CHD4-related syndrome: a comprehensive investigation of the clinical spectrum, genotype–phenotype correlations, and molecular basis
- Author
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Karin Weiss, Hayley P. Lazar, Alina Kurolap, Ariel F. Martinez, Tamar Paperna, Lior Cohen, Marie F. Smeland, Sandra Whalen, Solveig Heide, Boris Keren, Pauline Terhal, Melita Irving, Motoki Takaku, John D. Roberts, Robert M. Petrovich, Samantha A. Schrier Vergano, Amy Kenney, Hanne Hove, Elizabeth DeChene, Shane C. Quinonez, Estelle Colin, Alban Ziegler, Melissa Rumple, Mahim Jain, Danielle Monteil, Elizabeth R. Roeder, Kimberly Nugent, Arie van Haeringen, Michael Gambello, Avni Santani, Līvija Medne, Bryan Krock, Cara M. Skraban, Elaine H. Zackai, Holly A. Dubbs, Thomas Smol, Jamal Ghoumid, Michael J. Parker, Michael Wright, Peter Turnpenny, Jill Clayton-Smith, Kay Metcalfe, Hitoshi Kurumizaka, Bruce D. Gelb, Hagit Baris Feldman, Philippe M. Campeau, Maximilian Muenke, Paul A. Wade, and Katherine Lachlan
- Subjects
Genetics (clinical) - Published
- 2020
43. Do Management Interventions Last?: Evidence from an Experiment in India
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John D. Roberts, David McKenzie, Nicholas Bloom, and Aprajit Mahajan
- Subjects
medicine.medical_specialty ,business.industry ,Family medicine ,Psychological intervention ,medicine ,business - Published
- 2018
44. Do Management Interventions Last? Evidence from India
- Author
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Nicholas Bloom, Aprajit Mahajan, John D. Roberts, and David McKenzie
- Subjects
Cost–benefit analysis ,Management intervention ,Private sector development ,Psychological intervention ,Operations management ,Business ,Productivity - Published
- 2018
45. Dosage compensation and DNA methylation landscape of the X chromosome in mouse liver
- Author
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Christopher G. Duncan, Sara A. Grimm, Daniel L. Morgan, Pierre R. Bushel, Brian D. Bennett, NISC Comparative Sequencing Program, John D. Roberts, Frederick L. Tyson, B. Alex Merrick, and Paul A. Wade
- Subjects
0301 basic medicine ,Male ,X Chromosome ,lcsh:Medicine ,Biology ,Article ,03 medical and health sciences ,Mice ,X Chromosome Inactivation ,Animals ,lcsh:Science ,Gene ,X chromosome ,Epigenomics ,Genetics ,Multidisciplinary ,Dosage compensation ,lcsh:R ,Chromosome ,Methylation ,DNA Methylation ,Mice, Inbred C57BL ,030104 developmental biology ,CpG site ,Liver ,DNA methylation ,lcsh:Q ,CpG Islands ,Female - Abstract
DNA methylation plays a key role in X-chromosome inactivation (XCI), a process that achieves dosage compensation for X-encoded gene products between mammalian female and male cells. However, differential sex chromosome dosage complicates genome-wide epigenomic assessments, and the X chromosome is frequently excluded from female-to-male comparative analyses. Using the X chromosome in the sexually dimorphic mouse liver as a model, we provide a general framework for comparing base-resolution DNA methylation patterns across samples that have different chromosome numbers and ask at a systematic level if predictions by historical analyses of X-linked DNA methylation hold true at a base-resolution chromosome-wide level. We demonstrate that sex-specific methylation patterns on the X chromosome largely reflect the effects of XCI. While our observations concur with longstanding observations of XCI at promoter-proximal CpG islands, we provide evidence that sex-specific DNA methylation differences are not limited to CpG island boundaries. Moreover, these data support a model in which maintenance of CpG islands in the inactive state does not require complete regional methylation. Further, we validate an intragenic non-CpG methylation signature in genes escaping XCI in mouse liver. Our analyses provide insight into underlying methylation patterns that should be considered when assessing sex differences in genome-wide methylation analyses.
- Published
- 2017
46. Daily home opioid use in adults with sickle cell disease: The PiSCES project
- Author
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Donna K. McClish, John D. Roberts, Imoigele P. Aisiku, Viktor E. Bovbjerg, Lynne Penberthy, James L. Levenson, Bassam Dahman, de A Citero, Susan D. Roseff, and Wally R. Smith
- Subjects
Adult ,Male ,medicine.medical_specialty ,Time Factors ,Activities of daily living ,Adolescent ,Anemia ,Pain ,Self Administration ,Anemia, Sickle Cell ,Disease ,Drug Administration Schedule ,Young Adult ,Cost of Illness ,Antisickling Agents ,Internal medicine ,Activities of Daily Living ,Adaptation, Psychological ,Epidemiology ,medicine ,Humans ,Hydroxyurea ,Pharmacology (medical) ,Longitudinal Studies ,Young adult ,Pain Measurement ,business.industry ,General Medicine ,Middle Aged ,medicine.disease ,Analgesics, Opioid ,Treatment Outcome ,Anesthesiology and Pain Medicine ,Opioid ,Quality of Life ,Physical therapy ,Drug Therapy, Combination ,Female ,business ,Psychosocial ,Cohort study ,medicine.drug - Abstract
Background: Although opioid prescribing in sickle cell disease (SCD) can be controversial, little is published about patterns of opioid use. Objective: To report on home opioid use among adults with SCD. Design: Cohort study. Participants: Adults with SCD (n = 219) who completed daily pain diaries for up to 6 months and had at least one home pain day. Main measures: Use of long-acting or short-acting opioids, other analgesics, or adjuvants; the proportion of home days, home pain days, and home crisis days with opioid use; these two outcomes according to patient characteristics. Key results: Patients used opioids on 12,311 (78 percent) of 15,778 home pain days. Eighty-five patients (38.8 percent) used long-acting opioids with or without short-acting opioids and 103 (47.0 percent) used only short-acting opioids. Twenty-one (9.6 percent) patients used only non-opioid analgesics and 10 (4.6 percent) used no analgesics. Both pain intensity and pain frequency were higher among opioid users (analysis of variance [ANOVA], p < 0.0001). Opioid users used hydroxyurea more often than nonusers, even when controlling for mean pain on pain days. Among all patients, significant relationships were found between any opioid use and somatic symptom burden, SCD stress, negative coping, and physical and mental quality of life (QOL); the relationship with SCD stress and physical QOL remained when controlled for mean pain. Among opioid users, similar associations were found between frequency of opioid use and some disease-related and psychosocial variables. Conclusions: In this adult SCD sample, opioids were used by the majority of patients. Pain was the overwhelming characteristic associated with use, but disease-related and psychosocial variables were also associated.
- Published
- 2015
47. Predictive Ability of Intermittent Daily Sickle Cell Pain Assessment: The PiSCES Project
- Author
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Bassam Dahman, Wally R. Smith, John D. Roberts, Viktor E. Bovbjerg, Imoigele P. Aisiku, James L. Levenson, Donna K. McClish, and Susan D. Roseff
- Subjects
Adult ,Male ,medicine.medical_specialty ,Adolescent ,Anemia, Sickle Cell ,Cohort Studies ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Pain assessment ,Predictive Value of Tests ,Epidemiology ,Medicine ,Humans ,030212 general & internal medicine ,Longitudinal Studies ,Prospective Studies ,Young adult ,Prospective cohort study ,Pain Measurement ,business.industry ,Gold standard ,Virginia ,General Medicine ,Middle Aged ,medicine.disease ,Sickle cell anemia ,Anesthesiology and Pain Medicine ,PSYCHOLOGY, PSYCHIATRY, IMAGING & BRAIN NEUROSCIENCE SECTION ,Predictive value of tests ,Physical therapy ,Female ,Neurology (clinical) ,Chronic Pain ,business ,030217 neurology & neurosurgery ,Cohort study - Abstract
Background Pain diary assessment in sickle cell disease (SCD) may be expensive and impose a high respondent burden. Objective To report whether intermittent assessment could substitute for continuous daily pain assessment in SCD. Design Prospective cohort study. Setting Academic and community practices in Virginia. Patients. A total of 125 SCD patients age 16 years or older in the Pain in Sickle Cell Epidemiology Study. Measurements. Using pain measures that summarized all diaries as the gold standard, we tested the statistical equivalence of four alternative strategies that summarized diaries only from the week prior or the month prior to study completion; one week per month; or one day per week (random day). Summary measures included percent pain days, percent crisis days (self-defined), mean pain (0-9 Likert scale) on all days, and mean pain on pain days. Equivalence tests included comparisons of means, regression intercepts, and slopes, as well as measurement of R2. Results Compared with the gold standard, the one-day-per-week and one-week-per-month strategies yielded statistically equivalent means of six summary pain measures, and the week prior and month prior yielded equivalent means as some of the measures. Regression showed statistically equivalent slopes and intercepts to the gold standard using one-day-per-week and one-week-per-month strategies for percent pain days and percent crisis days, but almost no other equivalence. R2 values ranged from 0.64 to 0.989. Conclusions It is possible to simulate five- to six-month daily assessment of pain in SCD. Either one-day-per-week or one-week-per-month assessment yields an equivalent mean and fair regression equivalence.
- Published
- 2017
48. A phase 1 study of bortezomib and romidepsin in patients with chronic lymphocytic leukemia/small lymphocytic lymphoma, indolent B-cell lymphoma, peripheral T-cell lymphoma, or cutaneous T-cell lymphoma
- Author
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Prithviraj Bose, Thomas C. Shea, Amanda Garnett Singh, Heidi Sankala, Steven Grant, Victor Yazbeck, John D. Roberts, Beata Holkova, Kevin T. Hogan, Shuo Ma, Caryn Weir-Wiggins, Amy S. Kimball, Ellen Shrader, Sarah Conine, Wen Wan, Maciej Kmieciak, and Mary Beth Tombes
- Subjects
0301 basic medicine ,Oncology ,Male ,Cancer Research ,medicine.medical_specialty ,Pathology ,Maximum Tolerated Dose ,Chronic lymphocytic leukemia ,Article ,Romidepsin ,Bortezomib ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,hemic and lymphatic diseases ,Depsipeptides ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,B-cell lymphoma ,neoplasms ,business.industry ,Cutaneous T-cell lymphoma ,Lymphoma, T-Cell, Peripheral ,Hematology ,medicine.disease ,Combined Modality Therapy ,Leukemia, Lymphocytic, Chronic, B-Cell ,Peripheral T-cell lymphoma ,Lymphoma ,Lymphoma, T-Cell, Cutaneous ,030104 developmental biology ,Treatment Outcome ,030220 oncology & carcinogenesis ,Female ,business ,Progressive disease ,medicine.drug - Abstract
A phase 1 study was conducted to determine the dose-limiting toxicities and maximum tolerated dose (MTD) for bortezomib followed by romidepsin on days 1, 8, and 15 in patients with relapsed/refractory CLL/SLL or B- or T-cell lymphoma. Eighteen treated patients were evaluable for response. The MTD was 1.3 mg/m2 bortezomib and 10 mg/m2 romidepsin; median treatment duration was 3 cycles at this dose. The dose-limiting toxicities were grade 3 fatigue, vomiting, and chills. Two patients had partial responses, one lasting >2 years, 8 had stable disease, and 8 had progressive disease. The median duration of stable disease was 3.5 cycles. Correlative studies examining expression of NF-κB, XIAP, Bcl-xL, and Bim yielded variable results. The safety profile was consistent with that reported for single-agent bortezomib and romidepsin. This regimen has modest activity in heavily pre-treated patients with relapsed/refractory CLL or B- or T-cell lymphoma. NCT00963274.
- Published
- 2017
49. Phase I Trial of Bortezomib (PS-341; NSC 681239) and 'Nonhybrid' (Bolus) Infusion Schedule of Alvocidib (Flavopiridol; NSC 649890) in Patients with Recurrent or Refractory Indolent B-cell Neoplasms
- Author
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Caryn Weir-Wiggins, Wen Wan, John D. Roberts, Maciej Kmieciak, Viswanathan Ramakrishnan, Loveleen Kang, Rachid Baz, Cody J. Peer, Steven Grant, G. David Roodman, E. Brent Perkins, L. Austin Doyle, Prithviraj Bose, Martha D. Wellons, Robert K. Stuart, A. Dimitrios Colevas, Daniel C. Sullivan, Heidi Sankala, Beata Holkova, Ellen Shrader, William D. Figg, Kevin T. Hogan, Connie Honeycutt, Domenico Coppola, Mary Beth Tombes, and Jana L. Dawson
- Subjects
Adult ,Male ,Oncology ,Cancer Research ,medicine.medical_specialty ,Neutropenia ,Pharmacology ,Article ,Drug Administration Schedule ,Bortezomib ,chemistry.chemical_compound ,Piperidines ,Recurrence ,hemic and lymphatic diseases ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,Multiple myeloma ,Aged ,Flavonoids ,B-Lymphocytes ,Leukopenia ,business.industry ,Waldenstrom macroglobulinemia ,Middle Aged ,Alvocidib ,medicine.disease ,Boronic Acids ,Combined Modality Therapy ,Lymphoproliferative Disorders ,Regimen ,Treatment Outcome ,chemistry ,Pyrazines ,Retreatment ,Female ,Mantle cell lymphoma ,Drug Monitoring ,medicine.symptom ,business ,medicine.drug - Abstract
Purpose: This phase I study was conducted to determine the dose-limiting toxicities (DLT) and maximum tolerated dose (MTD) for the combination of bortezomib and alvocidib in patients with B-cell malignancies (multiple myeloma, indolent lymphoma, Waldenstrom macroglobulinemia, and mantle cell lymphoma). Experimental Design: Patients received bortezomib (intravenous push), followed by alvocidib (1-hour infusion), on days 1, 4, 8, and 11 of a 21-day treatment cycle. Patients experiencing responses or stable disease continued on treatment at the investigator's discretion. A standard 3+3 dose-escalation design was used to identify the MTD based on DLTs, and pharmacokinetic and pharmacodynamic studies were conducted. Results: A total of 44 patients were enrolled, with 39 patients assessed for response. The MTD was established as 1.3 mg/m2 for bortezomib and 40 mg/m2 for alvocidib. The most common hematologic toxicities included leukopenia, lymphopenia, neutropenia, and thrombocytopenia. The most common nonhematologic toxicities included diarrhea, fatigue, and sensory neuropathy. Three complete remissions (8%) and 10 partial remissions (26%) were observed for a total response rate of 33%. Pharmacokinetic findings with the current dosing regimen were consistent with the comparable literature and the hybrid dosing regimen. Pharmacodynamic study results did not correlate with clinical responses. Conclusions: The combination of bortezomib and alvocidib is tolerable, and an MTD has been established for this schedule. The regimen appears to be efficacious in patients with relapsed/refractory multiple myeloma or indolent non-Hodgkin lymphoma. As the nonhybrid regimen is less cumbersome than the previous hybrid dosing schedule regimen, the current schedule is recommended for successor studies. Clin Cancer Res; 20(22); 5652–62. ©2014 AACR.
- Published
- 2014
50. Conformational Preferences of N,N-Dimethylsuccinamate as a Function of Alkali and Alkaline Earth Metal Salts: Experimental Studies in DMSO and Water As Determined by 1H NMR Spectroscopy
- Author
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Bright U. Emenike, Holden W. H. Lai, Albert Tianxiang Liu, William R. Carroll, and John D. Roberts
- Subjects
inorganic chemicals ,Magnetic Resonance Spectroscopy ,Inorganic chemistry ,Molecular Conformation ,Article ,Metal ,Metals, Alkaline Earth ,Dimethyl Sulfoxide ,Physical and Theoretical Chemistry ,Conformational isomerism ,chemistry.chemical_classification ,Alkaline earth metal ,Ionic radius ,Metals, Alkali ,Water ,Succinates ,Nuclear magnetic resonance spectroscopy ,Alkali metal ,Crystallography ,chemistry ,visual_art ,visual_art.visual_art_medium ,Salts ,Protons ,Counterion ,Vicinal - Abstract
The fraction of gauche conformers of N,N-dimethylsuccinamic acid (1) and its Li(+), Na(+), K(+), Mg(2+), Ca(2+), and N(Bu)4(+) salts were estimated in DMSO and D2O solution by comparing the experimental vicinal proton-proton couplings determined by (1)H NMR spectroscopy with those calculated using the Haasnoot, de Leeuw, and Altona (HLA) equation. In DMSO, the gauche preferences were found to increase with decreasing Ahrens ionic radius of the metal counterion. The same trend was not seen in D2O, where the gauche fraction for all of the metallic salts were estimated to be approximately statistical or less. This highlights the importance of metal chelation on the conformation of organic molecules in polar aprotic media, which has implications for protein folding.
- Published
- 2014
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