12 results on '"Joelle Martin"'
Search Results
2. Improving Prediction of Free Fatty Acid Particle Formation in Biopharmaceutical Drug Products: Incorporating Ester Distribution during Polysorbate 20 Degradation
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Anthony Tomlinson, Joelle Martin, and Nidhi Doshi
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Polymers ,Chemistry, Pharmaceutical ,Drug Compounding ,Palmitic Acid ,Polysorbates ,Pharmaceutical Science ,02 engineering and technology ,Fatty Acids, Nonesterified ,Myristic Acid ,030226 pharmacology & pharmacy ,Micelle ,Palmitic acid ,Surface-Active Agents ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Drug Discovery ,Solubility ,Chromatography, High Pressure Liquid ,Micelles ,chemistry.chemical_classification ,Polysorbate ,Biological Products ,Chromatography ,Chemistry ,Hydrolysis ,Lauric Acids ,Fatty acid ,Esters ,021001 nanoscience & nanotechnology ,Lauric acid ,Critical micelle concentration ,Molecular Medicine ,lipids (amino acids, peptides, and proteins) ,Polysorbate 20 ,0210 nano-technology - Abstract
Polysorbate 20 (PS20) is a commonly used surfactant in biopharmaceutical formulations. It is a heterogeneous surfactant containing a distribution of fatty acid esters, which are subject to hydrolytic degradation, generating free fatty acids (FFAs). The FFAs can form visible or subvisible particles in drug product on stability. A previous FFA solubility model, developed by our group, predicts solubility limits for the three most prevalent FFA degradation products of PS20: lauric, myristic, and palmitic acid. The model takes into account two formulation parameters, pH and PS20 concentration, and their effect on FFA solubility. This work identifies a third parameter that has an impact on FFA solubility: PS20 ester distribution. When PS20 is hydrolytically degraded, the ester distribution of the remaining surfactant changes on stability. Ester distribution is known to influence the critical micelle concentration (CMC) of PS20 such that the monoesters have a much higher CMC compared to the higher-order esters (HOE). We hypothesize that as PS20 degrades, the CMC changes, affecting the proportion of PS20 that is present in micelles and capable of sequestering and solubilizing FFAs in these micelles. Here, PS20 was separated into monoester, HOE, and polyol fractions. The monoester and HOE fractions were mixed together to generate the mock degradation profiles of hydrolytically degraded PS20. FFA solubility was measured as a function of the concentration of these mock-degraded (MD) PS20s. The results indicate that ester distribution does have an impact on FFA solubility, especially at higher MD PS20 concentrations. HOEs solubilize up to 30 μg/mL more lauric acid than an equivalent amount of monoesters at a MD PS20 level of 0.06% w/v. With the addition of % HOE peak area fraction as a third parameter representing the ester distribution of PS20, the refined FFA solubility model more accurately predicts FFA solubility in protein formulations at 5 °C. The refined model suggests that drug products containing trace levels of host cell proteins (HCPs) that preferentially degrade HOEs of PS20 are at a higher risk of particle formation.
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- 2020
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3. Transcriptional Regulation of Amino Acid Transport in Glioblastoma Multiforme
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Robyn A. Umans, Joelle Martin, Megan E. Harrigan, Dipan C. Patel, Lata Chaunsali, Aarash Roshandel, Kavya Iyer, Michael D. Powell, Ken Oestreich, and Harald Sontheimer
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p53 ,Cancer Research ,glioblastoma multiforme ,Oncology ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,SLC7A11 ,glutamate ,RC254-282 ,Article - Abstract
Simple Summary Glioblastoma multiforme (GBM) is a highly invasive brain tumor that typically has poor patient outcomes. This is due in part to aggressive tumor expansion within the brain parenchyma. This process is aided by assiduous glutamate release via the System xc- (SXC) cystine–glutamate antiporter. SXC is over-expressed in roughly half of GBM tumors where it is responsible for glutamate-mediated neuronal cell death and provides excess glutamate to fuel tumor-associated epilepsy. Available pharmacological inhibitors have some promise, although they lack specificity and have poor bioavailability. Therefore, identifying regulators of SXC may provide a superior avenue to target GBM. In this study, we identify tumor protein 53 (TP53) as a molecular regulator of SXC in GBM. Abstract Glioblastoma multiforme (GBM) is a deadly brain tumor with a large unmet therapeutic need. Here, we tested the hypothesis that wild-type p53 is a negative transcriptional regulator of SLC7A11, the gene encoding the System xc- (SXC) catalytic subunit, xCT, in GBM. We demonstrate that xCT expression is inversely correlated with p53 expression in patient tissue. Using representative patient derived (PDX) tumor xenolines with wild-type, null, and mutant p53 we show that p53 expression negatively correlates with xCT expression. Using chromatin immunoprecipitation studies, we present a molecular interaction whereby p53 binds to the SLC7A11 promoter, suppressing gene expression in PDX GBM cells. Accordingly, genetic knockdown of p53 increases SLC7A11 transcript levels; conversely, over-expressing p53 in p53-null GBM cells downregulates xCT expression and glutamate release. Proof of principal studies in mice with flank gliomas demonstrate that daily treatment with the mutant p53 reactivator, PRIMA-1Met, results in reduced tumor growth associated with reduced xCT expression. These findings suggest that p53 is a molecular switch for GBM glutamate biology, with potential therapeutic utility.
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- 2021
4. Regulation of Amino Acid Transport in Glioma
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Harald Sontheimer, Robyn A. Umans, Stephanie M. Robert, and Joelle Martin
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chemistry.chemical_classification ,Programmed cell death ,business.industry ,Excitotoxicity ,Cystine ,Glutamate receptor ,Glutathione ,medicine.disease_cause ,medicine.disease ,Amino acid ,Chromatin ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Glioma ,medicine ,Surgery ,Neurology (clinical) ,business - Published
- 2019
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5. Development and implementation of a scalable and versatile test for COVID-19 diagnostics in rural communities
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Robyn A. Umans, N. Bissell, Harald Sontheimer, F. M. Michel, Dipan C. Patel, Carmen Muñoz-Ballester, Carla V. Finkielstein, Oscar B. Alcoreza, Michael J. Friedlander, T. Maynard, P. Bordwine, Bhanu P. Tewari, Allison N. Tegge, A. Ceci, Daniel Martinez-Martinez, Joelle Martin, and K. L. Brown
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0301 basic medicine ,Emergency Use Authorization ,medicine.medical_specialty ,Public land ,Computer science ,Science ,Supply chain ,General Physics and Astronomy ,Real-Time Polymerase Chain Reaction ,Sensitivity and Specificity ,General Biochemistry, Genetics and Molecular Biology ,Article ,Specimen Handling ,Genomic analysis ,03 medical and health sciences ,0302 clinical medicine ,Limit of Detection ,Nasopharynx ,Pandemic ,medicine ,Humans ,Pandemics ,Health policy ,Multidisciplinary ,SARS-CoV-2 ,Public health ,COVID-19 ,General Chemistry ,Equipment Design ,Gene expression profiling ,Test (assessment) ,Identification (information) ,030104 developmental biology ,Risk analysis (engineering) ,COVID-19 Nucleic Acid Testing ,Communicable Disease Control ,Printing, Three-Dimensional ,RNA, Viral ,Reagent Kits, Diagnostic ,Rural Health Services ,Rural area ,030217 neurology & neurosurgery - Abstract
Rapid and widespread testing of severe acute respiratory coronavirus 2 (SARS-CoV-2) is essential for an effective public health response aimed at containing and mitigating the coronavirus disease 2019 (COVID-19) pandemic. Successful health policy implementation relies on early identification of infected individuals and extensive contact tracing. However, rural communities, where resources for testing are sparse or simply absent, face distinctive challenges to achieving this success. Accordingly, we report the development of an academic, public land grant University laboratory-based detection assay for the identification of SARS-CoV-2 in samples from various clinical specimens that can be readily deployed in areas where access to testing is limited. The test, which is a quantitative reverse transcription polymerase chain reaction (RT-qPCR)-based procedure, was validated on samples provided by the state laboratory and submitted for FDA Emergency Use Authorization. Our test exhibits comparable sensitivity and exceeds specificity and inclusivity values compared to other molecular assays. Additionally, this test can be re-configured to meet supply chain shortages, modified for scale up demands, and is amenable to several clinical specimens. Test development also involved 3D engineering critical supplies and formulating a stable collection media that allowed samples to be transported for hours over a dispersed rural region without the need for a cold-chain. These two elements that were critical when shortages impacted testing and when personnel needed to reach areas that were geographically isolated from the testing center. Overall, using a robust, easy-to-adapt methodology, we show that an academic laboratory can supplement COVID-19 testing needs and help local health departments assess and manage outbreaks. This additional testing capacity is particularly germane for smaller cities and rural regions that would otherwise be unable to meet the testing demand., Here, the authors report the development of a versatile academic, SARSCoV-2 RT-qPCR molecular diagnostic test that uses 3D printed technology for sample collection, is implemented in rural setting in the US state of Virginia and validated in its population.
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- 2021
6. Astrocyte plasticity ensures continued endfoot coverage of cerebral blood vessels and integrity of the blood brain barrier, with plasticity declining with normal aging
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Ian F. Kimbrough, Woo Am, Shan Jiang, Harald Sontheimer, William A. Mills, Joelle Martin, and Bergstresser M
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Programmed cell death ,medicine.anatomical_structure ,medicine ,Focal ablation ,Normal aging ,Biology ,Plasticity ,Blood–brain barrier ,Neuroscience ,Astrocyte - Abstract
Astrocytes extend endfeet that enwrap the vasculature. Disruptions to this association in disease coincide with breaches in blood-brain barrier (BBB) integrity, so we asked if the focal ablation of an astrocyte is sufficient to disrupt the BBB. 2Phatal ablation of astrocytes induced a plasticity response whereby surrounding astrocytes extended processes to cover vascular vacancies. This occurred prior to endfoot retraction in young mice yet occurred with significant delay in aged animals. Laser-stimulating replacement astrocytes showed them to induce constrictions in pre-capillary arterioles indicating that replacement astrocytes are functional. Inhibition of EGFR and pSTAT3 significantly reduced astrocyte replacement post-ablation yet without perturbations to BBB integrity. Identical endfoot replacement following astrocyte cell death due to reperfusion post-stroke supports the conclusion that astrocyte plasticity ensures continual vascular coverage so as to retain the BBB. Together, these studies uncover the ability of astrocytes to maintain cerebrovascular coverage via substitution from nearby cells and may represent a novel therapeutic target for vessel recovery post-stroke.
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- 2021
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7. Astrocyte plasticity in mice ensures continued endfoot coverage of cerebral blood vessels following injury and declines with age
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William A, Mills, AnnaLin M, Woo, Shan, Jiang, Joelle, Martin, Dayana, Surendran, Matthew, Bergstresser, Ian F, Kimbrough, Ukpong B, Eyo, Michael V, Sofroniew, and Harald, Sontheimer
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Stroke ,Arterioles ,Mice ,Blood-Brain Barrier ,Astrocytes ,Animals - Abstract
Astrocytes extend endfeet that enwrap the vasculature, and disruptions to this association which may occur in disease coincide with breaches in blood-brain barrier (BBB) integrity. Here we investigate if focal ablation of astrocytes is sufficient to disrupt the BBB in mice. Targeted two-photon chemical apoptotic ablation of astrocytes induced a plasticity response whereby surrounding astrocytes extended processes to cover vascular vacancies. In young animals, replacement processes occur in advance of endfoot retraction, but this is delayed in aged animals. Stimulation of replacement astrocytes results in constriction of pre-capillary arterioles, suggesting that replacement astrocytes are functional. Pharmacological inhibition of pSTAT3, as well as astrocyte specific deletion of pSTAT3, reduces astrocyte replacement post-ablation, without perturbations to BBB integrity. Similar endfoot replacement occurs following astrocyte cell death due to reperfusion in a stroke model. Together, these studies uncover the ability of astrocytes to maintain cerebrovascular coverage via substitution from nearby cells.
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- 2021
8. Isonitrile Formation by a Non‐Heme Iron(II)‐Dependent Oxidase/Decarboxylase
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Nicholas C. Harris, David A. Born, Wenlong Cai, Yaobing Huang, Joelle Martin, Ryan Khalaf, Catherine L. Drennan, and Wenjun Zhang
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0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,010405 organic chemistry ,General Medicine ,01 natural sciences ,0104 chemical sciences - Published
- 2018
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9. Biosynthesis of isonitrile lipopeptides by conserved nonribosomal peptide synthetase gene clusters in Actinobacteria
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Joyce Liu, Jordan Downey, Ryan Khalaf, Nicolaus A. Herman, Michio Sato, Hiroyuki Koshino, Wenlong Cai, Frederick F. Twigg, Xuejun Zhu, Joelle Martin, Nicholas C. Harris, and Wenjun Zhang
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0301 basic medicine ,Catalysis ,Condensation domain ,Acylation ,Lipopeptides ,03 medical and health sciences ,chemistry.chemical_compound ,Protein Domains ,Thioesterase ,Biosynthesis ,Nonribosomal peptide ,Gene cluster ,Escherichia coli ,Peptide Synthases ,Gene ,chemistry.chemical_classification ,Chromatography ,Multidisciplinary ,Chemistry ,Lysine ,Fatty Acids ,Lipopeptide ,Biological Transport ,Mycobacterium tuberculosis ,Biological Sciences ,Chromatography, Ion Exchange ,Actinobacteria ,030104 developmental biology ,Biochemistry ,Metals ,Multigene Family ,Mutation ,Mycobacterium marinum ,Ribosomes ,Gene Deletion - Abstract
A putative lipopeptide biosynthetic gene cluster is conserved in many species of Actinobacteria, including Mycobacterium tuberculosis and M. marinum, but the specific function of the encoding proteins has been elusive. Using both in vivo heterologous reconstitution and in vitro biochemical analyses, we have revealed that the five encoding biosynthetic enzymes are capable of synthesizing a family of isonitrile lipopeptides (INLPs) through a thio-template mechanism. The biosynthesis features the generation of isonitrile from a single precursor Gly promoted by a thioesterase and a nonheme iron(II)-dependent oxidase homolog and the acylation of both amino groups of Lys by the same isonitrile acyl chain facilitated by a single condensation domain of a nonribosomal peptide synthetase. In addition, the deletion of INLP biosynthetic genes in M. marinum has decreased the intracellular metal concentration, suggesting the role of this biosynthetic gene cluster in metal transport.
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- 2017
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10. Isonitrile Formation by a Non-heme Iron(II)-dependent Oxidase/Decarboxylase
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Ryan Khalaf, Wenjun Zhang, Yao-Bing Huang, Catherine L. Drennan, Nicholas C. Harris, Joelle Martin, Wenlong Cai, David A. Born, Massachusetts Institute of Technology. Department of Biology, and Massachusetts Institute of Technology. Department of Chemistry
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Models, Molecular ,isocyanide ,Carboxy-Lyases ,Stereochemistry ,Virulence ,010402 general chemistry ,01 natural sciences ,acyl-acyl carrier protein ligase ,Catalysis ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,Protein structure ,Biosynthesis ,Models ,Oxidoreductase ,Nitriles ,Ferrous Compounds ,Non heme iron ,oxidoreductase ,Oxidative decarboxylation ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Oxidase test ,Molecular Structure ,010405 organic chemistry ,Organic Chemistry ,Molecular ,General Chemistry ,Streptomyces coeruleorubidus ,Streptomyces ,0104 chemical sciences ,3. Good health ,Enzyme ,chemistry ,protein structures ,Chemical Sciences ,Biocatalysis ,biosynthesis ,Oxidoreductases - Abstract
The electron-rich isonitrile is an important functionality in bioactive natural products, but its biosynthesis has been restricted to the IsnA family of isonitrile synthases. We herein provide the first structural and biochemical evidence of an alternative mechanism for isonitrile formation. ScoE, a putative non-heme iron(II)-dependent enzyme from Streptomyces coeruleorubidus, was shown to catalyze the conversion of (R)-3-((carboxymethyl)amino)butanoic acid to (R)-3-isocyanobutanoic acid through an oxidative decarboxylation mechanism. This work further provides a revised scheme for the biosynthesis of a unique class of isonitrile lipopeptides, of which several members are critical for the virulence of pathogenic mycobacteria., National Institutes of Health (U.S.). Molecular Biophysics Training Grant (T32 GM008313)
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- 2018
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11. Biosynthesis of Isonitrile Lipopeptides by Conserved Non-ribosomal Peptide Synthetase Gene Clusters in Actinobacteria
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Joyce Liu, Ryan Khalaf, Joelle Martin, Hiroyuki Koshino, Jordan Downey, Wenlong Cai, Michio Sato, Wenjun Zhang, Nicholas C. Harris, Nicolaus A. Herman, and Frederick F. Twigg
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chemistry.chemical_classification ,0303 health sciences ,010405 organic chemistry ,Lipopeptide ,Peptide ,Biology ,01 natural sciences ,0104 chemical sciences ,3. Good health ,Acylation ,Condensation domain ,03 medical and health sciences ,chemistry.chemical_compound ,Thioesterase ,chemistry ,Biosynthesis ,Biochemistry ,Gene cluster ,Gene ,030304 developmental biology - Abstract
A putative lipopeptide biosynthetic gene cluster is conserved in many species of Actinobacteria, including Mycobacterium tuberculosis and M. marinum, but the specific function of the encoding proteins has been elusive. Using both in vivo heterologous reconstitution and in intro biochemical analyses, we have revealed that the five encoding biosynthetic enzymes are capable of synthesizing a new family of isonitrile lipopeptides (INLPs) through a thio-template mechanism. The biosynthesis features the generation of isonitrile from a single precursor Gly promoted by a thioesterase and a non-heme iron(II)-dependent oxidase homologue, and the acylation of both amino groups of Lys by the same isonitrile acyl chain facilitated by a single condensation domain of a non-ribosomal peptide synthetase (NRPS). In addition, the deletion of INLP biosynthetic genes in M. marinum has decreased the intracellular metal concentration, suggesting the role of this biosynthetic gene cluster in metal transport.Significance StatementMycobacterium tuberculosis is the leading causative agent of tuberculosis (TB), of which millions of deaths occur annually. A putative lipopeptide biosynthetic gene cluster has been shown to be essential for the survival of this pathogen in hosts, and homologous gene clusters have also been found in all pathogenic mycobacteria and other species of Actinobacteria. We have identified the function of these gene clusters in making a new family of isonitrile lipopeptides. The biosynthesis has several unique features, including an unprecedented mechanism for isonitrile synthesis. Our results have further suggested that these biosynthetic gene clusters play a role in metal transport, and thus have shed light on a new metal transport system that is crucial for virulence of pathogenic mycobacteria.
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- 2017
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12. L'Analyse de contenu assistée par ordinateur: l'option LIAO
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Pierre Plante, Elise Nantel, Joelle Martin, and Gilles Lavigne
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Arts and Humanities (miscellaneous) ,General Social Sciences ,Sociology ,Humanities - Abstract
In the field of sociological methodology innovation is a must. LIAO, a computer assisted interview analyser, has been developed to increase analytical efficiency. This tool is not based on a linguistic model; it simply has the ability to do with a computer what is usually done with a pencil. Computer assistance induces objectivity, allows for a better control of analysis, facilitates handling of large amounts of data. Dans le domaine de la recherche sociologique le remue-menage au niveau des methodes et des techniques est inevitable, mieux benefique. C'est dans la perspective d'une bonification des methodes qu'a ete congu LIAO: instrument destine a assister la description d'interviews et la construction d'inferences. Ce lecteur ne repose pas sur la linguistique, LIAO permet de faire avec un ordinateur ce qui, en analyse de contenu, se fait d'ordinaire avec un crayon. L'informatique accroit l'objectivite, permet la repetition, autorise le traitement d'une information plus massive.
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- 2008
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