24 results on '"Jillian K. Warejko"'
Search Results
2. Mutations in six nephrosis genes delineate a pathogenic pathway amenable to treatment
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Shazia Ashraf, Hiroki Kudo, Jia Rao, Atsuo Kikuchi, Eugen Widmeier, Jennifer A. Lawson, Weizhen Tan, Tobias Hermle, Jillian K. Warejko, Shirlee Shril, Merlin Airik, Tilman Jobst-Schwan, Svjetlana Lovric, Daniela A. Braun, Heon Yung Gee, David Schapiro, Amar J. Majmundar, Carolin E. Sadowski, Werner L. Pabst, Ankana Daga, Amelie T. van der Ven, Johanna M. Schmidt, Boon Chuan Low, Anjali Bansal Gupta, Brajendra K. Tripathi, Jenny Wong, Kirk Campbell, Kay Metcalfe, Denny Schanze, Tetsuya Niihori, Hiroshi Kaito, Kandai Nozu, Hiroyasu Tsukaguchi, Ryojiro Tanaka, Kiyoshi Hamahira, Yasuko Kobayashi, Takumi Takizawa, Ryo Funayama, Keiko Nakayama, Yoko Aoki, Naonori Kumagai, Kazumoto Iijima, Henry Fehrenbach, Jameela A. Kari, Sherif El Desoky, Sawsan Jalalah, Radovan Bogdanovic, Nataša Stajić, Hildegard Zappel, Assel Rakhmetova, Sharon-Rose Wassmer, Therese Jungraithmayr, Juergen Strehlau, Aravind Selvin Kumar, Arvind Bagga, Neveen A. Soliman, Shrikant M. Mane, Lewis Kaufman, Douglas R. Lowy, Mohamad A. Jairajpuri, Richard P. Lifton, York Pei, Martin Zenker, Shigeo Kure, and Friedhelm Hildebrandt
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Science - Abstract
Nephrotic syndrome is the second most common chronic kidney disease but there are no targeted treatment strategies available. Here the authors identify mutations of six genes codifying for proteins involved in cytoskeleton remodelling and modulation of small GTPases in 17 families with nephrotic syndrome.
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- 2018
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3. Fanconi syndrome, nephrotic-range proteinuria, and hypoalbuminemia in a newborn—Occam’s razor or Hickam’s dictum? Answers
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James T. Nugent, Juliann Reardon, Christine Crana, Jason H. Greenberg, Jillian K. Warejko, and Julie E. Goodwin
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Nephrology ,Pediatrics, Perinatology and Child Health - Published
- 2021
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4. The scope of treatment of pediatric IgA vasculitis nephritis and its outcome: a Pediatric Nephrology Research Consortium study
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Mahmoud Kallash, Beth A. Vogt, Ahmed Zeid, Ei Khin, Mohammed Najjar, Ahmad Aldughiem, Elizabeth Benoit, Brian Stotter, Michelle Rheault, Jillian K. Warejko, and Ankana Daga
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Adult ,Nephritis ,Nephrotic Syndrome ,Adolescent ,IgA Vasculitis ,Infant ,Acute Kidney Injury ,Proteinuria ,Young Adult ,Nephrology ,Child, Preschool ,Creatinine ,Pediatrics, Perinatology and Child Health ,Humans ,Child ,Immunosuppressive Agents ,Aged ,Retrospective Studies - Abstract
IgA vasculitis (IgAV) is the most common type of vasculitis in children. There is a lack of consensus for management of significant IgAV nephritis (IgAVN). This study was designed to identify the most used treatment options and describe their efficacy.This is a multicenter retrospective study of children age 1-21 years with IgAVN who were managed for at least 6 months by a nephrologist. Subjects with at least microscopic hematuria and proteinuria and/or decreased kidney function were enrolled. Kidney outcome was assessed by eGFR and urine protein/creatinine (UPC) ratios at 2-4 weeks, 3, 6, and 12 months post-diagnosis.A total of 128 subjects with median age of 7 years (range 2-18) were included. Of these, 69 subjects had kidney biopsy with crescents detected in 53%. AKI (P = 0.039), nephrosis (P = 0.038), and crescents on biopsy (P = 0.013) were more likely in older patients. Patients with UPC 1 mg/mg were more likely to get a kidney biopsy (P 0.001) and to be treated with steroids ± immunosuppressive (IS) agents (P = 0.001). Sixty-six percent of patients were treated with steroids and/or IS agents for variable durations. Anti-metabolite agents were the most common IS agents used with variability in dosing and duration. At 12 months, most subjects had a normal eGFR (79%) (median 123, range 68-207 mL/min/1.73 mIS agents are frequently used in managing IgAVN associated with heavy proteinuria, nephrosis, and/or AKI. Prospective studies are needed to determine indications and needed duration of IS therapy. A higher resolution version of the Graphical abstract is available as Supplementary information.
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- 2021
5. An unusual cause of relapsing peritonitis in a patient on peritoneal dialysis
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James T. Nugent, Christine Crana, and Jillian K. Warejko
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Renal Dialysis ,Recurrence ,Nephrology ,Humans ,Peritonitis ,Peritoneal Dialysis - Published
- 2022
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6. Epidemiology and Risk Factors for Hemodialysis Access–Associated Infections in Children: A Prospective Cohort Study From the SCOPE Collaborative
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Rebecca L, Ruebner, Heidi Gruhler, De Souza, Troy, Richardson, Badreldin, Bedri, Olivera, Marsenic, Franca, Iorember, Jillian K, Warejko, Bradley A, Warady, and Alicia M, Neu
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Cohort Studies ,Renal Dialysis ,Risk Factors ,Nephrology ,Catheter-Related Infections ,Humans ,Prospective Studies ,Child - Abstract
Infections cause significant morbidity and mortality for children receiving maintenance hemodialysis (HD). The Standardizing Care to Improve Outcomes in Pediatric End-Stage Kidney Disease (SCOPE) Collaborative is a quality-improvement initiative aimed at reducing dialysis-associated infections by implementing standardized care practices. This study describes patient-level risk factors for catheter-associated bloodstream infections (CA-BSIs) and examines the association between dialysis center-level compliance with standardized practices and risk of CA-BSI.Prospective cohort study.Children enrolled in SCOPE between June 2013 and July 2019.Data were collected on patient characteristics and center-level compliance with HD catheter care practices across the study period. Centers were categorized as consistent, dynamic (improved compliance over the study period), or inconsistent performers based on frequency of compliance audit submission and changes in compliance with HD care practices over time.CA-BSIs.Generalized linear mixed models were used to evaluate (1) patient-level risk factors for CA-BSI and (2) associations between change in center-level compliance and CA-BSIs.The cohort included 1,277 children from 35 pediatric dialysis centers; 1,018 (79.7%) had a catheter and 259 (20.3%) had an arteriovenous fistula or graft. Among children with a catheter, mupirocin use at the catheter exit site was associated with an increased rate of CA-BSIs (rate ratio [RR], 4.45; P = 0.004); the use of no antibiotic agent at the catheter exit site was a risk factor of borderline statistical significance (RR, 1.79; P = 0.05). Overall median compliance with HD catheter care practices was 87.5% (IQR, 77.3%-94.0%). Dynamic performing centers showed a significant decrease in CA-BSI rates over time (from 2.71 to 0.71 per 100 patient-months; RR, 0.98; P 0.001), whereas no significant change in CA-BSI rates was detected among consistent or inconsistent performers.Lack of data on adherence to HD care practices on the individual patient level.Improvement in compliance with standardized HD care practices over time may lead to a reduction in dialysis-associated infections.
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- 2022
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7. Fanconi syndrome, nephrotic-range proteinuria, and hypoalbuminemia in a newborn-Occam's razor or Hickam's dictum? Questions
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James T. Nugent, Jillian K. Warejko, Jason H. Greenberg, Christine Crana, Julie E. Goodwin, and Juliann L. Reardon
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Pediatrics ,medicine.medical_specialty ,Proteinuria ,biology ,business.industry ,Fanconi syndrome ,Metabolic acidosis ,Hickam's dictum ,medicine.disease ,Nephrin ,Nephrology ,Pediatrics, Perinatology and Child Health ,medicine ,biology.protein ,Hypoalbuminemia ,medicine.symptom ,business ,Congenital nephrotic syndrome ,Nephrotic syndrome - Published
- 2021
8. An initiative to improve pneumococcal immunization counseling in children with nephrotic syndrome
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Linda S Anderson, Jillian K. Warejko, Beth L. Emerson, Jason H. Greenberg, and Ibrahim Sandokji
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Counseling ,medicine.medical_specialty ,Quality management ,Nephrotic Syndrome ,Psychological intervention ,Pediatrics ,Pneumococcal Infections ,Pneumococcal Vaccines ,Intervention (counseling) ,Medicine ,Humans ,Electronic health records ,Quality improvement ,Child ,business.industry ,Vaccination ,Targeted interventions ,medicine.disease ,Pneumococcal polysaccharide vaccine ,Immunization ,Nephrology ,Family medicine ,Pediatrics, Perinatology and Child Health ,Original Article ,Pneumococcal ,business ,Nephrotic syndrome - Abstract
Background Immunization is essential in preventing life-threatening pneumococcal infections in children with nephrotic syndrome. An additional 23-valent pneumococcal polysaccharide vaccine (PPSV23) series is required for children with nephrotic syndrome. Despite current practice guidelines, many children with nephrotic syndrome do not receive PPSV23. Methods Our nephrology clinic conducted a quality improvement project to improve the overall rate of PPSV23 counseling to more than 70% within a 12-month period by applying several targeted interventions to raise providers’ awareness, improve communication with primary care providers, and increase provider adherence. Data was collected from the electronic health record (EHR), and monthly performance was tracked via monthly control charts and overall immunization counseling rate charts. Results We increased adherence to PPSV23 vaccination counseling from a baseline of 12 to 86%. The first intervention that effectively increased the vaccine counseling rate from 12 to 30% was improving a provider’s awareness of the PPSV23 literature and vaccine guidelines. Other interventions included regular performance reviews at division meetings, creating an immunization protocol, posting performance charts on the office bulletin board, and unifying vaccine recommendation templates. Lastly, specific and timely EHR reminders improved the total counseling rate from 52 to 86% and maintained adherence until the completion of the project. Conclusion Bridging the knowledge gap in provider awareness and using specific EHR reminders can improve adherence to PPSV23 counseling in children with nephrotic syndrome. Such interventions could be applied to similar groups of immunocompromised patients in whom additional vaccines are indicated. Graphical abstract A higher resolution version of the Graphical abstract is available as Supplementary information. Supplementary Information The online version contains supplementary material available at 10.1007/s00467-021-05305-3.
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- 2021
9. Atypical hemolytic uremic syndrome due to DGKE mutation and response to eculizumab: lessons for the clinical nephrologist
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Anya Golkowski Barron, Ibrahim Sandokji, Brian Barron, Olivera Marsenic, Danya Husain, and Jillian K. Warejko
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Nephrology ,Pediatrics ,medicine.medical_specialty ,business.industry ,Complement Inhibitors ,Eculizumab ,medicine.disease ,Internal medicine ,Mutation (genetic algorithm) ,Atypical hemolytic uremic syndrome ,medicine ,business ,medicine.drug - Published
- 2021
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10. Atypical hemolytic uremic syndrome due to DGKE mutation and response to eculizumab: lessons for the clinical nephrologist
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Danya, Husain, Brian, Barron, Anya Golkowski, Barron, Ibrahim, Sandokji, Olivera, Marsenic, and Jillian K, Warejko
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Male ,Nephrologists ,Diacylglycerol Kinase ,Mutation ,Humans ,Infant ,Antibodies, Monoclonal, Humanized ,Atypical Hemolytic Uremic Syndrome - Published
- 2020
11. Mutations in multiple components of the nuclear pore complex cause nephrotic syndrome
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Larissa Kerecuk, Tilman Jobst-Schwan, Weizhen Tan, Khalid A. Alhasan, Mais Hashem, Shrikant Mane, Jonathan Marquez, Seema Hashmi, Shahid Mahmood Baig, Svjetlana Lovric, Heon Yung Gee, Kaitlyn Eddy, Johanna Magdalena Schmidt, Sara Gonçalves, Jillian K. Warejko, Ayaz Khan, Mustafa K. Khokha, Charlotte A. Hoogstraten, Hannah Hugo, Mercedes Ubetagoyena, Birgit Budde, M. Asif, Amar J. Majmundar, Jennifer A. Lawson, Qian Shen, Gema Ariceta, Angelika A. Noegel, Tobias Hermle, Eugen Widmeier, Susanne Motameny, Nilufar Mohebbi, Friedhelm Hildebrandt, Janine Altmüller, Richard P. Lifton, Kathrin Schrage, Thomas M. Kitzler, Muhammad Sajid Hussain, Amy Kolb, Hanan M. Fathy, Arwa Ishaq A. Khayyat, Ankana Daga, Robert B. Ettenger, David Schapiro, Daniela A. Braun, Erkin Serdaroglu, Shirlee Shril, Hong Xu, Syeda Seema Waseem, Fowzan S. Alkuraya, Jia Rao, Ronen Schneider, C. Patrick Lusk, Daniel P. Gale, Corinne Antignac, Peter Nürnberg, Wolfram Antonin, Shazia Ashraf, and Abubakar Moawia
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0301 basic medicine ,Nephrotic Syndrome ,Protein subunit ,Xenopus Proteins ,medicine.disease_cause ,Cell Line ,Xenopus laevis ,03 medical and health sciences ,medicine ,Animals ,Humans ,Nuclear pore ,Allele ,Gene ,Zebrafish ,Genetics ,Mutation ,biology ,Effector ,General Medicine ,Zebrafish Proteins ,biology.organism_classification ,Phenotype ,Nuclear Pore Complex Proteins ,Disease Models, Animal ,Renal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11] ,030104 developmental biology ,Gene Knockdown Techniques - Abstract
Item does not contain fulltext Steroid-resistant nephrotic syndrome (SRNS) almost invariably progresses to end-stage renal disease. Although more than 50 monogenic causes of SRNS have been described, a large proportion of SRNS remains unexplained. Recently, it was discovered that mutations of NUP93 and NUP205, encoding 2 proteins of the inner ring subunit of the nuclear pore complex (NPC), cause SRNS. Here, we describe mutations in genes encoding 4 components of the outer rings of the NPC, namely NUP107, NUP85, NUP133, and NUP160, in 13 families with SRNS. Using coimmunoprecipitation experiments, we showed that certain pathogenic alleles weakened the interaction between neighboring NPC subunits. We demonstrated that morpholino knockdown of nup107, nup85, or nup133 in Xenopus disrupted glomerulogenesis. Re-expression of WT mRNA, but not of mRNA reflecting mutations from SRNS patients, mitigated this phenotype. We furthermore found that CRISPR/Cas9 knockout of NUP107, NUP85, or NUP133 in podocytes activated Cdc42, an important effector of SRNS pathogenesis. CRISPR/Cas9 knockout of nup107 or nup85 in zebrafish caused developmental anomalies and early lethality. In contrast, an in-frame mutation of nup107 did not affect survival, thus mimicking the allelic effects seen in humans. In conclusion, we discovered here that mutations in 4 genes encoding components of the outer ring subunits of the NPC cause SRNS and thereby provide further evidence that specific hypomorphic mutations in these essential genes cause a distinct, organ-specific phenotype.
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- 2018
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12. Mutations in WDR4 as a new cause of Galloway-Mowat syndrome
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Friedhelm Hildebrandt, Weizhen Tan, Tobias Hermle, Merlin Airik, Shazia Ashraf, Johanna Magdalena Schmidt, Monkol Lek, Makiko Nakayama, Jitendra Kumar Meena, Jillian K. Warejko, Jing Chen, Arvind Bagga, Aditi Sinha, Amar J. Majmundar, Ankana Daga, Kristen M. Laricchia, Eugen Widmeier, Tilman Jobst-Schwan, Charlotte A. Hoogstraten, Hannah Hugo, Shirlee Shril, Jia Rao, David Schapiro, Daniela A. Braun, and Ronen Schneider
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0301 basic medicine ,Genetics ,Microcephaly ,Mutation ,Splice site mutation ,Renal glomerulus ,Biology ,Disease gene identification ,medicine.disease ,medicine.disease_cause ,Galloway Mowat syndrome ,03 medical and health sciences ,030104 developmental biology ,medicine ,Allele ,Genetics (clinical) ,Exome sequencing - Abstract
Galloway-Mowat syndrome (GAMOS) is a phenotypically heterogeneous disorder characterized by neurodevelopmental defects combined with renal-glomerular disease, manifesting with proteinuria. To identify additional monogenic disease causes, we here performed whole exome sequencing (WES), linkage analysis, and homozygosity mapping in three affected siblings of an Indian family with GAMOS. Applying established criteria for variant filtering, we identify a novel homozygous splice site mutation in the gene WDR4 as the likely disease-causing mutation in this family. In line with previous reports, we observe growth deficiency, microcephaly, developmental delay, and intellectual disability as phenotypic features resulting from WDR4 mutations. However, the newly identified allele additionally gives rise to proteinuria and nephrotic syndrome, a phenotype that was never reported in patients with WDR4 mutations. Our data thus expand the phenotypic spectrum of WDR4 mutations by demonstrating that, depending on the specific mutated allele, a renal phenotype may be present. This finding suggests that GAMOS may occupy a phenotypic spectrum with other microcephalic diseases. Furthermore, WDR4 is an additional example of a gene that encodes a tRNA modifying enzyme and gives rise to GAMOS, if mutated. Our findings thereby support the recent observation that, like neurons, podocytes of the renal glomerulus are particularly vulnerable to cellular defects resulting from altered tRNA modifications.
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- 2018
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13. GAPVD1 and ANKFY1 Mutations Implicate RAB5 Regulation in Nephrotic Syndrome
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Laura S. Finn, Monkol Lek, Amar J. Majmundar, Richard P. Lifton, Shrikant M. Mane, Friedhelm Hildebrandt, Kristen M. Laricchia, Makiko Nakayama, Arvind Bagga, Sawsan M Jalalah, David Schapiro, Daniela A. Braun, Velibor Tasic, Sherif El Desoky, Daniel G. MacArthur, Shazia Ashraf, Amelie T. van der Ven, Tobias Hermle, Shirlee Shril, Ankana Daga, Heidi L. Rehm, Jameela A. Kari, Jillian K. Warejko, Joel D. Hernandez, Eugen Widmeier, Ronen Schneider, Tilman Jobst-Schwan, and Jia Rao
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0301 basic medicine ,Genetics ,HEK 293 cells ,030232 urology & nephrology ,Colocalization ,General Medicine ,Biology ,Podocyte ,Nephrin ,03 medical and health sciences ,Basic Research ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Nephrology ,medicine ,biology.protein ,Gene silencing ,Missense mutation ,Ectopic expression ,Gene - Abstract
Background Steroid-resistant nephrotic syndrome (SRNS) is a frequent cause of CKD. The discovery of monogenic causes of SRNS has revealed specific pathogenetic pathways, but these monogenic causes do not explain all cases of SRNS. Methods To identify novel monogenic causes of SRNS, we screened 665 patients by whole-exome sequencing. We then evaluated the in vitro functional significance of two genes and the mutations therein that we discovered through this sequencing and conducted complementary studies in podocyte-like Drosophila nephrocytes. Results We identified conserved, homozygous missense mutations of GAPVD1 in two families with early-onset NS and a homozygous missense mutation of ANKFY1 in two siblings with SRNS. GAPVD1 and ANKFY1 interact with the endosomal regulator RAB5. Coimmunoprecipitation assays indicated interaction between GAPVD1 and ANKFY1 proteins, which also colocalized when expressed in HEK293T cells. Silencing either protein diminished the podocyte migration rate. Compared with wild-type GAPVD1 and ANKFY1, the mutated proteins produced upon ectopic expression of GAPVD1 or ANKFY1 bearing the patient-derived mutations exhibited altered binding affinity for active RAB5 and reduced ability to rescue the knockout-induced defect in podocyte migration. Coimmunoprecipitation assays further demonstrated a physical interaction between nephrin and GAPVD1, and immunofluorescence revealed partial colocalization of these proteins in rat glomeruli. The patient-derived GAPVD1 mutations reduced nephrin-GAPVD1 binding affinity. In Drosophila , silencing Gapvd1 impaired endocytosis and caused mistrafficking of the nephrin ortholog. Conclusions Mutations in GAPVD1 and probably in ANKFY1 are novel monogenic causes of NS. The discovery of these genes implicates RAB5 regulation in the pathogenesis of human NS.
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- 2018
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14. Whole Exome Sequencing Reveals a Monogenic Cause of Disease in ≈43% of 35 Families With Midaortic Syndrome
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Friedhelm Hildebrandt, Avram Z. Traum, James E. Lock, Jillian K. Warejko, Weizhen Tan, Asaf Vivante, Gulraiz Chaudry, Deborah R. Stein, Leslie B. Smoot, Shrikant M. Mane, Edward R. Smith, Ankana Daga, Khashayar Vakili, Kassaundra Amann, Shirlee Shril, Richard P. Lifton, Ghaleb Daouk, Michael J. Rivkin, Michael J. Somers, Daniela A. Braun, Michelle A. Baum, Michael N. Singh, Michael A. J. Ferguson, Nancy Rodig, Heung Bae Kim, Diego Porras, Jennifer A. Lawson, and Markus Schueler
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Male ,0301 basic medicine ,Candidate gene ,Adolescent ,Neurofibromatoses ,Disease ,medicine.disease_cause ,Article ,Cohort Studies ,03 medical and health sciences ,Exome Sequencing ,Genotype ,Internal Medicine ,medicine ,Humans ,Aorta, Abdominal ,Neurofibromatosis ,Child ,Genetic Association Studies ,Exome sequencing ,Genetics ,Mutation ,Neurofibromin 1 ,business.industry ,Vascular disease ,Aortic Valve Stenosis ,Syndrome ,medicine.disease ,United States ,Pedigree ,030104 developmental biology ,Child, Preschool ,Hypertension ,Female ,business ,Jagged-1 Protein - Abstract
Midaortic syndrome (MAS) is a rare cause of severe childhood hypertension characterized by narrowing of the abdominal aorta in children and is associated with extensive vascular disease. It may occur as part of a genetic syndrome, such as neurofibromatosis, or as consequence of a pathological inflammatory disease. However, most cases are considered idiopathic. We hypothesized that in a high percentage of these patients, a monogenic cause of disease may be detected by evaluating whole exome sequencing data for mutations in 1 of 38 candidate genes previously described to cause vasculopathy. We studied a cohort of 36 individuals from 35 different families with MAS by exome sequencing. In 15 of 35 families (42.9%), we detected likely causal dominant mutations. In 15 of 35 (42.9%) families with MAS, whole exome sequencing revealed a mutation in one of the genes previously associated with vascular disease ( NF1 , JAG1 , ELN , GATA6 , and RNF213 ). Ten of the 15 mutations have not previously been reported. This is the first report of ELN , RNF213 , or GATA6 mutations in individuals with MAS. Mutations were detected in NF1 (6/15 families), JAG1 (4/15 families), ELN (3/15 families), and one family each for GATA6 and RNF213 . Eight individuals had syndromic disease and 7 individuals had isolated MAS. Whole exome sequencing can provide conclusive molecular genetic diagnosis in a high fraction of individuals with syndromic or isolated MAS. Establishing an etiologic diagnosis may reveal genotype/phenotype correlations for MAS in the future and should, therefore, be performed routinely in MAS.
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- 2018
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15. Panel sequencing distinguishes monogenic forms of nephritis from nephrosis in children
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Ankana Daga, Jillian K. Warejko, Svjetlana Lovric, Weizhen Tan, Shazia Ashraf, Shirlee Shril, Amelie T. van der Ven, Tobias Hermle, David Schapiro, Daniela A. Braun, Heon Yung Gee, Merlin Airik, Friedhelm Hildebrandt, Jia Rao, Ronen Schneider, Eugen Widmeier, Amar J. Majmundar, Jennifer A. Lawson, Inés Fessi, Tilman Jobst-Schwan, and Makiko Nakayama
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Genetic Markers ,Male ,medicine.medical_specialty ,Nephrotic Syndrome ,Adolescent ,Nephrosis ,DNA Mutational Analysis ,030232 urology & nephrology ,Nephritis, Hereditary ,030204 cardiovascular system & hematology ,urologic and male genital diseases ,Gastroenterology ,Cohort Studies ,Diagnosis, Differential ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Exome Sequencing ,Atypical hemolytic uremic syndrome ,medicine ,Humans ,Alport syndrome ,Child ,Exome sequencing ,Atypical Hemolytic Uremic Syndrome ,Transplantation ,Nephritis ,Proteinuria ,business.industry ,Infant, Newborn ,Infant ,Prognosis ,medicine.disease ,female genital diseases and pregnancy complications ,Nephrology ,Child, Preschool ,Mutation ,Female ,ORIGINAL ARTICLES ,medicine.symptom ,business ,Nephrotic syndrome ,Kidney disease - Abstract
Background Alport syndrome (AS) and atypical hemolytic-uremic syndrome (aHUS) are rare forms of chronic kidney disease (CKD) that can lead to a severe decline of renal function. Steroid-resistant nephrotic syndrome (SRNS) is more common than AS and aHUS and causes 10% of childhood-onset CKD. In recent years, multiple monogenic causes of AS, aHUS and SRNS have been identified, but their relative prevalence has yet to be studied together in a typical pediatric cohort of children with proteinuria and hematuria. We hypothesized that identification of causative mutations by whole exome sequencing (WES) in known monogenic nephritis and nephrosis genes would allow distinguishing nephritis from nephrosis in a typical pediatric group of patients with both proteinuria and hematuria at any level. Methods We therefore conducted an exon sequencing (WES) analysis for 11 AS, aHUS and thrombotic thrombocytopenic purpura-causing genes in an international cohort of 371 patients from 362 families presenting with both proteinuria and hematuria before age 25 years. In parallel, we conducted either WES or high-throughput exon sequencing for 23 SRNS-causing genes in all patients. Results We detected pathogenic mutations in 18 of the 34 genes analyzed, leading to a molecular diagnosis in 14.1% of families (51 of 362). Disease-causing mutations were detected in 3 AS-causing genes (4.7%), 3 aHUS-causing genes (1.4%) and 12 NS-causing genes (8.0%). We observed a much higher mutation detection rate for monogenic forms of CKD in consanguineous families (35.7% versus 10.1%). Conclusions We present the first estimate of relative frequency of inherited AS, aHUS and NS in a typical pediatric cohort with proteinuria and hematuria. Important therapeutic and preventative measures may result from mutational analysis in individuals with proteinuria and hematuria.
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- 2018
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16. Genetic variants in the LAMA5 gene in pediatric nephrotic syndrome
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Jillian K. Warejko, Shazia Ashraf, Jia Rao, Friedhelm Hildebrandt, Johanna Magdalena Schmidt, Tobias Hermle, Makiko Nakayama, Amar J. Majmundar, Eugen Widmeier, Weizhen Tan, Tilman Jobst-Schwan, Shrikant Mane, Ronen Schneider, Sevcan A. Bakkaloglu, Ghaleb Daouk, Richard P. Lifton, Ankana Daga, Jameela A. Kari, Sherif El Desoky, Charlotte A. Hoogstraten, Hannah Hugo, Shirlee Shril, David Schapiro, and Daniela A. Braun
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Adult ,Male ,Nephrotic Syndrome ,Adolescent ,DNA Mutational Analysis ,030232 urology & nephrology ,030204 cardiovascular system & hematology ,medicine.disease_cause ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Gene mapping ,Exome Sequencing ,medicine ,Humans ,Hypoalbuminemia ,Child ,Gene ,Exome sequencing ,Genetics ,Transplantation ,Mutation ,business.industry ,Homozygote ,Infant, Newborn ,Infant ,Prognosis ,medicine.disease ,Disease gene identification ,Pedigree ,Renal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11] ,Phenotype ,Nephrology ,Child, Preschool ,Female ,Laminin ,ORIGINAL ARTICLES ,business ,Nephrotic syndrome ,Immunosuppressive Agents ,Orthologous Gene - Abstract
Item does not contain fulltext BACKGROUND: Nephrotic syndrome (NS), a chronic kidney disease, is characterized by significant loss of protein in the urine causing hypoalbuminemia and edema. In general, approximately 15% of childhood-onset cases do not respond to steroid therapy and are classified as steroid-resistant NS (SRNS). In approximately 30% of cases with SRNS, a causative mutation can be detected in one of 44 monogenic SRNS genes. The gene LAMA5 encodes laminin-alpha5, an essential component of the glomerular basement membrane. Mice with a hypomorphic mutation in the orthologous gene Lama5 develop proteinuria and hematuria. METHODS: To identify additional monogenic causes of NS, we performed whole exome sequencing in 300 families with pediatric NS. In consanguineous families we applied homozygosity mapping to identify genomic candidate loci for the underlying recessive mutation. RESULTS: In three families, in whom mutations in known NS genes were excluded, but in whom a recessive, monogenic cause of NS was strongly suspected based on pedigree information, we identified homozygous variants of unknown significance (VUS) in the gene LAMA5. While all affected individuals had nonsyndromic NS with an early onset of disease, their clinical outcome and response to immunosuppressive therapy differed notably. CONCLUSION: We here identify recessive VUS in the gene LAMA5 in patients with partially treatment-responsive NS. More data will be needed to determine the impact of these VUS in disease management. However, familial occurrence of disease, data from genetic mapping and a mouse model that recapitulates the NS phenotypes suggest that these genetic variants may be inherited factors that contribute to the development of NS in pediatric patients.
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- 2018
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17. Whole exome sequencing frequently detects a monogenic cause in early onset nephrolithiasis and nephrocalcinosis
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Deborah R. Stein, Weizhen Tan, Amar J. Majmundar, Richard P. Lifton, David Schapiro, Daniela A. Braun, Jan Halbritter, Christian Hanna, John A. Sayer, Margarita Halty, Avram Z. Traum, Sherif M. El-Desoky, Velibor Tasic, Shrikant Mane, Friedhelm Hildebrandt, Asaf Vivante, Michelle A. Baum, Shirlee Shril, Seema Hashmi, Michael A. J. Ferguson, Zoran Gucev, Caleb P. Nelson, Avi Katz, Ghaleb Daouk, Heon Yung Gee, Neveen A. Soliman, Tilman Jobst-Schwan, Michael J. Somers, Eugen Widmeier, Danko Milosevic, Ari J. Wassner, Jameela A. Kari, Hanan M. Fathy, Ankana Daga, Andrew L. Schwaderer, Jennifer A. Lawson, Jillian K. Warejko, and Nancy Rodig
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Genetic Markers ,Male ,0301 basic medicine ,Heredity ,Adolescent ,030232 urology & nephrology ,Disease ,Consanguinity ,Biology ,Nephrolithiasis ,Bioinformatics ,Article ,Young Adult ,Kidney Calculi ,03 medical and health sciences ,0302 clinical medicine ,Predictive Value of Tests ,Risk Factors ,Exome Sequencing ,medicine ,Humans ,Genetic Predisposition to Disease ,Genetic Testing ,Age of Onset ,Child ,Gene ,Genetic Association Studies ,Exome sequencing ,Ultrasonography ,Genetics ,Phenocopy ,Incidence (epidemiology) ,Infant ,Prognosis ,medicine.disease ,Pedigree ,Nephrocalcinosis ,Phenotype ,030104 developmental biology ,Nephrology ,Child, Preschool ,Mutation ,Mutation (genetic algorithm) ,Disease Progression ,Female ,nephrolithiasis ,nephrocalcinosis, monogenic cause ,whole exome sequencing ,Tomography, X-Ray Computed - Abstract
The incidence of nephrolithiasis continues to rise. Previously, we showed that a monogenic cause could be detected in 11.4% of individuals with adult-onset nephrolithiasis or nephrocalcinosis and in 16.7-20.8% of individuals with onset before 18 years of age, using gene panel sequencing of 30 genes known to cause nephrolithiasis/nephrocalcinosis. To overcome the limitations of panel sequencing, we utilized whole exome sequencing in 51 families, who presented before age 25 years with at least one renal stone or with a renal ultrasound finding of nephrocalcinosis to identify the underlying molecular genetic cause of disease. In 15 of 51 families, we detected a monogenic causative mutation by whole exome sequencing. A mutation in seven recessive genes ( AGXT, ATP6V1B1, CLDN16, CLDN19, GRHPR, SLC3A1, SLC12A1 ), in one dominant gene ( SLC9A3R1 ), and in one gene ( SLC34A1 ) with both recessive and dominant inheritance was detected. Seven of the 19 different mutations were not previously described as disease-causing. In one family, a causative mutation in one of 117 genes that may represent phenocopies of nephrolithiasis-causing genes was detected. In nine of 15 families, the genetic diagnosis may have specific implications for stone management and prevention. Several factors that correlated with the higher detection rate in our cohort were younger age at onset of nephrolithiasis/nephrocalcinosis, presence of multiple affected members in a family, and presence of consanguinity. Thus, we established whole exome sequencing as an efficient approach toward a molecular genetic diagnosis in individuals with nephrolithiasis/nephrocalcinosis who manifest before age 25 years.
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- 2018
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18. Whole-Exome Sequencing Identifies Causative Mutations in Families with Congenital Anomalies of the Kidney and Urinary Tract
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Kassaundra Amann, Richard P. Lifton, Shirlee Shril, Weizhen Tan, Aravind Selvin, Avram Z. Traum, Jameela A. Kari, Nancy Rodig, Rufeng Dai, Leslie Spaneas, David Schapiro, Daniela A. Braun, Jing Chen, Michelle A. Baum, Friedhelm Hildebrandt, Julian Schulz, Shazia Ashraf, Heiko Reutter, Ali Amar, Ronen Schneider, Prabha Senguttuvan, Michael A. J. Ferguson, Weining Lu, Thomas M. Kitzler, Hannah Hugo, Makiko Nakayama, Radovan Bogdanovic, Asaf Vivante, Daniel G. MacArthur, Hanan M. Fathy, Charlotte A. Hoogstraaten, Simone Sanna-Cherchi, Sherif El Desoky, Ghaleb Daouk, Natasa Stajic, Loai A. Eid, Deborah R. Stein, Amar J. Majmundar, Ankana Daga, Michael W. Wilson, Caroline M. Kolvenbach, Franziska Kause, Hazem S. Awad, Heidi L. Rehm, Velibor Tasic, Jillian K. Warejko, Shrikant Mane, Monkol Lek, Tobias Hermle, Richard S. Lee, Muna Al-Saffar, Neveen A. Soliman, Nina Mann, Stuart B. Bauer, Amelie T. van der Ven, Kristen M. Laricchia, Daw-Yang Hwang, Hadas Ityel, Danko Milosevic, Dervla M. Connaughton, Michael J. Somers, Eugen Widmeier, Tilman Jobst-Schwan, and Johanna Magdalena Schmidt
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0301 basic medicine ,030232 urology & nephrology ,Disease ,Biology ,medicine.disease_cause ,Kidney ,Risk Assessment ,Sensitivity and Specificity ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Genotype ,Exome Sequencing ,medicine ,Animals ,Humans ,Genetic Predisposition to Disease ,Sex Distribution ,Urinary Tract ,Gene ,Exome sequencing ,Genetics ,Phenocopy ,Vesico-Ureteral Reflux ,Mutation ,Incidence ,General Medicine ,medicine.disease ,Prognosis ,Phenotype ,Pedigree ,Renal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11] ,030104 developmental biology ,Basic Research ,Nephrology ,Urogenital Abnormalities ,Congenital Anomalies of the Kidney and Urinary Tract (CAKUT) ,Vesico-ureteral Reflux (VUR) ,Whole Exome Sequencing (WES) ,monogenic disease causation ,renal developmental gene ,Kidney disease - Abstract
Item does not contain fulltext BACKGROUND: Congenital anomalies of the kidney and urinary tract (CAKUT) are the most prevalent cause of kidney disease in the first three decades of life. Previous gene panel studies showed monogenic causation in up to 12% of patients with CAKUT. METHODS: We applied whole-exome sequencing to analyze the genotypes of individuals from 232 families with CAKUT, evaluating for mutations in single genes known to cause human CAKUT and genes known to cause CAKUT in mice. In consanguineous or multiplex families, we additionally performed a search for novel monogenic causes of CAKUT. RESULTS: In 29 families (13%), we detected a causative mutation in a known gene for isolated or syndromic CAKUT that sufficiently explained the patient's CAKUT phenotype. In three families (1%), we detected a mutation in a gene reported to cause a phenocopy of CAKUT. In 15 of 155 families with isolated CAKUT, we detected deleterious mutations in syndromic CAKUT genes. Our additional search for novel monogenic causes of CAKUT in consanguineous and multiplex families revealed a potential single, novel monogenic CAKUT gene in 19 of 232 families (8%). CONCLUSIONS: We identified monogenic mutations in a known human CAKUT gene or CAKUT phenocopy gene as the cause of disease in 14% of the CAKUT families in this study. Whole-exome sequencing provides an etiologic diagnosis in a high fraction of patients with CAKUT and will provide a new basis for the mechanistic understanding of CAKUT. 01 september 2018
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- 2018
19. Whole Exome Sequencing of Patients with Steroid-Resistant Nephrotic Syndrome
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Heon Yung Gee, Richard P. Lifton, Aytül Noyan, Stefan Kohl, Weizhen Tan, Michael A. J. Ferguson, Neveen A. Soliman, Deborah R. Stein, Jing Chen, Svjetlana Lovric, J. Magdalena Schmidt, Jameela A. Kari, Avram Z. Traum, Jia Rao, Gil Chernin, Sherif El Desoky, Radovan Bogdanovic, Nadine Benador, Werner L. Pabst, Hanan M. Fathy, Jeffrey B. Kopp, Jillian K. Warejko, Asaf Vivante, Henry Fehrenbach, Detlef Bockenhauer, Carolin E. Sadowski, Velibor Tasic, Robert B. Ettenger, Amelie T. van der Ven, Shrikant Mane, Ankana Daga, Jeffrey Hopcian, Martin Zenker, Markus J. Kemper, Amar J. Majmundar, Erkin Serdaroglu, Ronen Schneider, Fatih Ozaltin, Ghaleb Daouk, Natasa Stajic, Nancy Rodig, Jennifer A. Lawson, Reyner Loza Munarriz, Melissa A. Cadnapaphornchai, Hadas Ityel, Shazia Ashraf, Rainer Büscher, Dominik N. Müller, Makiko Nakayama, Michelle A. Baum, Seema Hashmi, Ludmila Podracka, David Schapiro, Daniela A. Braun, Shirlee Shril, Michael J. Somers, Eugen Widmeier, Tilman Jobst-Schwan, Friedhelm Hildebrandt, Sevcan A. Bakkaloglu, and Tobias Hermle
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Adult ,Genetic Markers ,Male ,0301 basic medicine ,Pediatrics ,medicine.medical_specialty ,Candidate gene ,Heredity ,Nephrotic Syndrome ,Adolescent ,Epidemiology ,DNA Mutational Analysis ,Medizin ,030232 urology & nephrology ,Critical Care and Intensive Care Medicine ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Mutation Rate ,Predictive Value of Tests ,Exome Sequencing ,medicine ,Humans ,Genetic Predisposition to Disease ,Age of Onset ,Child ,Exome ,Congenital nephrotic syndrome ,Genetic Association Studies ,Exome sequencing ,Phenocopy ,Transplantation ,business.industry ,Infant ,Original Articles ,Prognosis ,medicine.disease ,Pedigree ,Steroid-resistant nephrotic syndrome ,Phenotype ,030104 developmental biology ,Nephrology ,Child, Preschool ,Mutation ,Female ,Age of onset ,business ,Nephrotic syndrome - Abstract
Background and objectives Steroid-resistant nephrotic syndrome overwhelmingly progresses to ESRD. More than 30 monogenic genes have been identified to cause steroid-resistant nephrotic syndrome. We previously detected causative mutations using targeted panel sequencing in 30% of patients with steroid-resistant nephrotic syndrome. Panel sequencing has a number of limitations when compared with whole exome sequencing. We employed whole exome sequencing to detect monogenic causes of steroid-resistant nephrotic syndrome in an international cohort of 300 families. Design, setting, participants, & measurements Three hundred thirty-five individuals with steroid-resistant nephrotic syndrome from 300 families were recruited from April of 1998 to June of 2016. Age of onset was restricted to Results In 74 of 300 families (25%), we identified a causative mutation in one of 20 genes known to cause steroid-resistant nephrotic syndrome. In 11 families (3.7%), we detected a mutation in a gene that causes a phenocopy of steroid-resistant nephrotic syndrome. This is consistent with our previously published identification of mutations using a panel approach. We detected a causative mutation in a known steroid-resistant nephrotic syndrome gene in 38% of consanguineous families and in 13% of nonconsanguineous families, and 48% of children with congenital nephrotic syndrome. A total of 68 different mutations were detected in 20 of 33 steroid-resistant nephrotic syndrome genes. Fifteen of these mutations were novel. NPHS1, PLCE1, NPHS2, and SMARCAL1 were the most common genes in which we detected a mutation. In another 28% of families, we detected mutations in one or more candidate genes for steroid-resistant nephrotic syndrome. Conclusions Whole exome sequencing is a sensitive approach toward diagnosis of monogenic causes of steroid-resistant nephrotic syndrome. A molecular genetic diagnosis of steroid-resistant nephrotic syndrome may have important consequences for the management of treatment and kidney transplantation in steroid-resistant nephrotic syndrome.
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- 2017
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20. Analysis of 24 genes reveals a monogenic cause in 11.1% of cases with steroid-resistant nephrotic syndrome at a single center
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Heon Yung Gee, Michelle A. Baum, Svjetlana Lovric, Asaf Vivante, Jia Rao, Deborah R. Stein, Merlin Airik, Ghaleb Daouk, Shazia Ashraf, Nancy Rodig, Jillian K. Warejko, Michael A. J. Ferguson, David Schapiro, Weizhen Tan, Michael J. Somers, Eugen Widmeier, Shirlee Shril, and Friedhelm Hildebrandt
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Male ,0301 basic medicine ,Oncology ,medicine.medical_specialty ,Nephrotic Syndrome ,Adolescent ,Genotype ,DNA Mutational Analysis ,030232 urology & nephrology ,Disease ,Article ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Multiplex polymerase chain reaction ,medicine ,Humans ,Genetic Predisposition to Disease ,Child ,Genetic testing ,Genetics ,medicine.diagnostic_test ,business.industry ,High-Throughput Nucleotide Sequencing ,Infant ,medicine.disease ,Steroid-resistant nephrotic syndrome ,INF2 ,030104 developmental biology ,Nephrology ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Mutation (genetic algorithm) ,Mutation testing ,Female ,business ,Nephrotic syndrome - Abstract
Steroid-resistant nephrotic syndrome (SRNS) is the second most frequent cause of end-stage renal disease (ESRD) among patients manifesting at under 25 years of age. We performed mutation analysis using a high-throughput PCR-based microfluidic technology in 24 single-gene causes of SRNS in a cohort of 72 families, who presented with SRNS before the age of 25 years. Within an 18-month interval, we obtained DNA samples, pedigree information, and clinical information from 77 consecutive children with SRNS from 72 different families seen at Boston Children’s Hospital (BCH). Mutation analysis was completed by combining high-throughput multiplex PCR with next-generation sequencing. We analyzed the sequences of 18 recessive and 6 dominant genes of SRNS in all 72 families for disease-causing variants. We identified the disease-causing mutation in 8 out of 72 (11.1%) families. Mutations were detected in the six genes: NPHS1 (2 out of 72), WT1 (2 out of 72), NPHS2, MYO1E, TRPC6, and INF2. Median age at onset was 4.1 years in patients without a mutation (range 0.5–18.8), and 3.2 years in those in whom the causative mutation was detected (range 0.1–14.3). Mutations in dominant genes presented with a median onset of 4.5 years (range 3.2–14.3). Mutations in recessive genes presented with a median onset of 0.5 years (range 0.1–3.2). Our molecular genetic diagnostic study identified underlying monogenic causes of steroid-resistant nephrotic syndrome in ~11% of patients with SRNS using a cost-effective technique. We delineated some of the therapeutic, diagnostic, and prognostic implications. Our study confirms that genetic testing is indicated in pediatric patients with SRNS.
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- 2017
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21. Whole-Exome Sequencing Enables a Precision Medicine Approach for Kidney Transplant Recipients
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Weizhen Tan, Shannon Manzi, Asaf Vivante, Thomas M. Kitzler, Michael J. Somers, Eugen Widmeier, Deborah R. Stein, Michelle A. Baum, Hannah Hugo, Shazia Ashraf, Michael A. J. Ferguson, Ankana Daga, Avram Z. Traum, Amelie T. van der Ven, Svjetlana Lovric, Nancy Rodig, Shrikant Mane, Heung Bae Kim, Makiko Nakayama, Jillian K. Warejko, Shirlee Shril, Friedhelm Hildebrandt, Jing Chen, Amar J. Majmundar, Kassaundra Amann, Richard P. Lifton, Leslie Spaneas, Ronen Schneider, Daniela A. Braun, Ghaleb Daouk, Tilman Jobst-Schwan, Nina Mann, Hadas Ityel, Dervla M. Connaughton, and Khashayar Vakili
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Graft Rejection ,Male ,medicine.medical_specialty ,Adolescent ,Urinary system ,Risk Assessment ,Severity of Illness Index ,End stage renal disease ,Cohort Studies ,Internal medicine ,Exome Sequencing ,medicine ,Humans ,Genetic Predisposition to Disease ,Genetic Testing ,Precision Medicine ,Renal Insufficiency, Chronic ,Child ,Exome sequencing ,Retrospective Studies ,business.industry ,Graft Survival ,General Medicine ,Precision medicine ,medicine.disease ,Hospitals, Pediatric ,Prognosis ,Kidney Transplantation ,Survival Analysis ,Transplant Recipients ,Transplantation ,Basic Research ,Treatment Outcome ,Nephrology ,Child, Preschool ,Etiology ,Female ,business ,Nephrotic syndrome ,Kidney disease ,Boston - Abstract
Background Whole-exome sequencing (WES) finds a CKD-related mutation in approximately 20% of patients presenting with CKD before 25 years of age. Although provision of a molecular diagnosis could have important implications for clinical management, evidence is lacking on the diagnostic yield and clinical utility of WES for pediatric renal transplant recipients. Methods To determine the diagnostic yield of WES in pediatric kidney transplant recipients, we recruited 104 patients who had received a transplant at Boston Children’s Hospital from 2007 through 2017, performed WES, and analyzed results for likely deleterious variants in approximately 400 genes known to cause CKD. Results By WES, we identified a genetic cause of CKD in 34 out of 104 (32.7%) transplant recipients. The likelihood of detecting a molecular genetic diagnosis was highest for patients with urinary stone disease (three out of three individuals), followed by renal cystic ciliopathies (seven out of nine individuals), steroid-resistant nephrotic syndrome (nine out of 21 individuals), congenital anomalies of the kidney and urinary tract (ten out of 55 individuals), and chronic glomerulonephritis (one out of seven individuals). WES also yielded a molecular diagnosis for four out of nine individuals with ESRD of unknown etiology. The WES-related molecular genetic diagnosis had implications for clinical care for five patients. Conclusions Nearly one third of pediatric renal transplant recipients had a genetic cause of their kidney disease identified by WES. Knowledge of this genetic information can help guide management of both transplant patients and potential living related donors.
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- 2019
22. Single-center experience in pediatric renal transplantation using thymoglobulin induction and steroid minimization
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S. Paul Hmiel and Jillian K. Warejko
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Graft Rejection ,Male ,medicine.medical_specialty ,Adolescent ,Bone density ,Urology ,Renal function ,Kaplan-Meier Estimate ,Single Center ,Methylprednisolone ,Young Adult ,chemistry.chemical_compound ,medicine ,Humans ,Child ,Antilymphocyte Serum ,Retrospective Studies ,Transplantation ,Creatinine ,Intention-to-treat analysis ,Thymoglobulin ,business.industry ,Graft Survival ,Infant ,Retrospective cohort study ,Kidney Transplantation ,Surgery ,Treatment Outcome ,chemistry ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Kidney Failure, Chronic ,Drug Therapy, Combination ,Female ,business ,Immunosuppressive Agents ,Follow-Up Studies - Abstract
Our center has offered thymoglobulin induction with steroid minimization to our pediatric renal transplant patients for the last 10 yr. Steroid minimization or avoidance has shown favorable results in survival, kidney function, and growth in previous studies of pediatric patients. We report our experience with this protocol over the past 10 yr with respect to patient/graft survival, acute rejection episodes, renal function, linear growth, bone density, cardiovascular risk factors, and opportunistic infections. A retrospective chart review was performed for pediatric renal transplant patients on the steroid-minimized protocol between January 2002 and December 2011 on an intention to treat basis. Patient demographics, height, weight, serum creatinine, iGFR, biopsies, and survival data were collected. Height and weight z-scores were calculated with EpiInfo 7, using the CDC 2000 growth charts. Survival was calculated using Kaplan-Meier analysis. eGFR was calculated using the original and modified Schwartz equations. Forty-four pediatric patients were identified, aged 13 months to 19 yr. Five-yr survival was 95.5% for males and 94.4% for females. Only five patients had biopsy-proven ACR, two of which were at more than 12 months post-transplantation. Height delta z-scores from transplant to one, three, and five yr were 0.34, 0.38, and 0.79, respectively. Weight delta z-scores from transplant to one, three, and five yr were 0.87, 0.79, and 0.84, respectively. Mean original Schwartz eGFR was 84.3 ± 15.8 mL/min/1.73 m(2) , modified Schwartz eGFR was 59.3 ± 11.5 mL/min/1.73 m(2) , and iGFR was 64.2 ± 8.5 mL/min/1.73 m(2) at three yr. Of 18 subjects who had a bone density exam, none had a z-score less than -2 on DEXA exam at one-yr post-transplantation. Fifty-one percent of patients were on antihypertensives at the time of transplant compared with 43% at one-yr post-transplantation. Three yr post-transplantation, the average LDL was
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- 2014
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23. Mutations in KEOPS-complex genes cause nephritic syndrome with primary microcephaly
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Sebastian A. Leidel, Sarah Vergult, Olivier Gribouval, Olivia Boyer, Annapurna Poduri, Fatih Ozaltin, Heon Yung Gee, Oraly Sanchez-Ferras, Ankana Daga, David A. Sweetser, Chyong Hsin Hsu, Carolin E. Sadowski, Nithiwat Vatanavicharn, Shirlee Shril, Bruno Collinet, Verena Matejas, Jeremy F.P. Ullmann, Jennifer A. Lawson, Weizhen Tan, David Chitayat, Peter Kannu, Emmanuelle Lemyre, Megan T. Cho, Gaëlle H. Martin, Amber Begtrup, Jui Hsing Chang, Matthias T.F. Wolf, Agnieszka Prytuła, Jennifer Hu, Peter C. Dedon, Sik Nin Wong, Gessica Truglio, Maxime Bouchard, Sandra D. Kienast, Tobias Hermle, Merlin Airik, Manish D. Sinha, Rebecca O. Littlejohn, Takashi Shiihara, Daniella Magen, Yu Yuan Ke, Kenza Soulami, Denny Schanze, Chitra Prasad, Dominique Liger, Svjetlana Lovric, Kazuyuki Nakamura, Jameela A. Kari, Wai Ming Lai, Wen Hui Tsai, Jeng Daw Tsai, Eugen Widmeier, Neveen A. Soliman, Tilman Jobst-Schwan, Shazia Ashraf, Amira Masri, Jia Rao, Jillian K. Warejko, Tamara Basta, Martin Zenker, Brendan Beeson, Corinne Antignac, Malcolm Bruce, Patrick E. Gipson, Mónica Furlano, Géraldine Mollet, Johanna Magdalena Schmidt, Jessica L. Waxler, Daniela A. Braun, Karin Scharmann, David Schapiro, Shrikant Mane, Shuan-Pei Lin, Marleen Praet, Patrick M. Gaffney, Werner L. Pabst, Charlotte A. Hoogstraten, Björn Menten, Nina De Rocker, Richard P. Lifton, Anne Claire Boschat, Klaas J. Wierenga, Chao Huei Chen, Cathy Kiraly-Borri, Nathalie Boddaert, Marie Claire Daugeron, Bert Callewaert, Gaik Siew Ch’ng, Sylvia Sanquer, Won-Il Choi, Udo Vester, Herman van Tilbeurgh, Rezan Topaloglu, David Viskochil, Elizabeth Roeder, Friedhelm Hildebrandt, I. Chiara Guerrera, Rhonda E. Schnur, Patrick Rump, Babak Behnam, Patrick Revy, Mastaneh Moghtaderi, Université Paris Descartes - Paris 5 (UPD5), Imagine - Institut des maladies génétiques (IMAGINE - U1163), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université Sorbonne Paris Cité (USPC), Laboratoire des Maladies Rénales Héréditaires, Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut Jacques Monod (IJM (UMR_7592)), Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS), Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Département Microbiologie (Dpt Microbio), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Biologie Cellulaire des Archées (ARCHEE), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Intégrative de la Cellule (I2BC), Service de néphrologie pédiatrique [CHU Necker], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-CHU Necker - Enfants Malades [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Division of Nephrology, Boston Children's Hospital, Institute of Human Genetics (University Hospital Magdeburg), University Hospital of the Otto von Guericke University of Magdeburg, Service de Radiologie et imagerie médicale [CHU Necker], CHU Necker - Enfants Malades [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), UPMC - UFR Sciences de la vie (UFR 927 ), Université Pierre et Marie Curie - Paris 6 (UPMC), Département Biochimie, Biophysique et Biologie Structurale (B3S), Fonction et Architecture des Assemblages Macromoléculaires (FAAM), Institut de biochimie et biophysique moléculaire et cellulaire (IBBMC), Université Paris-Sud - Paris 11 (UP11)-Centre National de la Recherche Scientifique (CNRS), Plateforme Protéomique Necker [SFR Necker] (PPN - 3P5), Structure Fédérative de Recherche Necker (SFR Necker - UMS 3633 / US24), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Service de biochimie métabolique [CHU Necker], Toxicité environnementale, cibles thérapeutiques, signalisation cellulaire (T3S - UMR_S 1124), Université Paris Descartes - Paris 5 (UPD5)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM), Ghent University Hospital, Institut de génétique et microbiologie [Orsay] (IGM), Institute of Human Genetics [Erlangen, Allemagne], Friedrich-Alexander Universität Erlangen-Nürnberg (FAU), Max Planck Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, GeneDx [Gaithersburg, MD, USA], Université de Montréal (UdeM), CHU Sainte Justine [Montréal], University of Amman, Cabinet de Néphrologie pédiatrique [Casablanca, Maroc], Università degli Studi di Roma 'La Sapienza' = Sapienza University [Rome], Singapore-MIT Alliance for Research and Technology (SMART), Massachusetts Institute of Technology (MIT), Yale University [New Haven], Yale University School of Medicine, University of Toronto, Center for Medical Genetics [Ghent], Institute of Human Genetics, University Hospital Magdeburg, Service de Génétique Médicale [CHU Necker], Howard Hughes Medical Institute [Chevy Chase] (HHMI), Howard Hughes Medical Institute (HHMI), Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université Paris-Sud - Paris 11 (UP11)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Université Paris-Saclay, Université Paris-Sud - Paris 11 (UP11)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Université Paris-Saclay-Université Paris-Sud - Paris 11 (UP11)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Université Paris-Saclay, Université Paris-Sud - Paris 11 (UP11)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Université Paris-Saclay-Université Paris-Sud - Paris 11 (UP11)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Université Paris-Saclay-Institut de Biologie Intégrative de la Cellule (I2BC), CHU Necker - Enfants Malades [AP-HP]-Assistance publique - Hôpitaux de Paris (AP-HP) (APHP), Assistance publique - Hôpitaux de Paris (AP-HP) (APHP)-CHU Necker - Enfants Malades [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (APHP), Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Assistance publique - Hôpitaux de Paris (AP-HP) (APHP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Assistance publique - Hôpitaux de Paris (AP-HP) (APHP), Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Assistance publique - Hôpitaux de Paris (AP-HP) (APHP), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), University Hospital Erlangen, Université de Montréal [Montréal], Sapienza University [Rome], Singapore-MIT Alliance for Research and Technology (SMART) Centre, CREATE Tower, Singapore 138602, Singapore (SMART), Singapore-MIT Alliance for Research and Technology (SMART) Centre, Howard Hugues Medical Institute, Università degli Studi di Roma 'La Sapienza' = Sapienza University [Rome] (UNIROMA), Yale School of Medicine [New Haven, Connecticut] (YSM), and Çocuk Sağlığı ve Hastalıkları
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Microcephaly ,Nephrotic Syndrome ,MICROBIO ,FAAM ,DNA Repair ,cell migration ,congenital nephrotic syndrome ,Apoptosis ,DNA damage response ,Pediatrics ,Galloway Mowat syndrome ,Mice ,gene silencing ,Models ,Cell Movement ,GALLOWAY-MOWAT SYNDROME ,molecular pathology ,newborn ,caspase 3 ,KEOPS complex ,ARCHEE ,microcephaly ,Cytoskeleton ,Genetics & Heredity ,Mutation ,Gene knockdown ,clinical article ,UNFOLDED PROTEIN RESPONSE ,Intracellular Signaling Peptides and Proteins ,Endoplasmic Reticulum Stress ,transfer RNA ,3. Good health ,Cell biology ,TRANSFER-RNA MODIFICATION ,Nephrosis ,TPRKB protein ,actin filament ,phenotype ,embryo ,Article ,loss of function mutation ,in vivo study ,03 medical and health sciences ,OSGEP protein ,protein serine threonine kinase ,Genetics ,Humans ,YEAST ,human ,mouse ,autosomal recessive disorder ,animal model ,Molecular ,MASS-SPECTROMETRY ,DNA ,zebrafish protein ,medicine.disease ,LAGE3 protein ,Transfer ,carrier protein ,030104 developmental biology ,proteasome ,cell proliferation ,Multiprotein Complexes ,Unfolded protein response ,CRISPR-Cas Systems ,Carrier Proteins ,Models, Molecular ,0301 basic medicine ,SECKEL-SYNDROME ,Hernia ,Protein Conformation ,[SDV]Life Sciences [q-bio] ,Medizin ,Post-Transcriptional ,medicine.disease_cause ,lethality ,Gene Knockout Techniques ,TP53RK protein ,RNA, Transfer ,multiprotein complex ,gene mutation ,RNA Processing, Post-Transcriptional ,Zebrafish ,Hiatal ,child ,biology ,Podocytes ,LAGE3 protein, human ,apoptosis ,Metalloendopeptidases ,Protein-Serine-Threonine Kinases ,unclassified drug ,epidermal growth factor ,female ,O-sialoglycoprotein endopeptidase ,endoplasmic reticulum stress ,metalloproteinase ,B3S ,WDR73 ,RNA Processing ,DNA repair ,CRISPR-CAS9 system ,animal experiment ,Protein Serine-Threonine Kinases ,GENOME MAINTENANCE ,male ,medicine ,KINASE ,Animals ,signal peptide ,controlled study ,TPRKB protein, human ,TP53RK protein, human ,nonhuman ,gene deletion ,Telomere Homeostasis ,Zebrafish Proteins ,Actin cytoskeleton ,biology.organism_classification ,Molecular biology ,actin related protein 2-3 complex ,infant ,Hernia, Hiatal ,adolescent ,RNA ,homozygosity - Abstract
Galloway-Mowat syndrome (GAMOS) is a severe autosomal-recessive disease characterized by the combination of early-onset steroid-resistant nephrotic syndrome (SRNS) and microcephaly with brain anomalies. To date, mutations of WDR73 are the only known monogenic cause of GAMOS and in most affected individuals the molecular diagnosis remains elusive. We here identify recessive mutations of OSGEP, TP53RK, TPRKB, or LAGE3, encoding the 4 subunits of the KEOPS complex in 33 individuals of 30 families with GAMOS. CRISPR/Cas9 knockout in zebrafish and mice recapitulates the human phenotype of microcephaly and results in early lethality. Knockdown of OSGEP, TP53RK, or TPRKB inhibits cell proliferation, which human mutations fail to rescue, and knockdown of either gene activates DNA damage response signaling and induces apoptosis. OSGEP and TP53RK molecularly interact and co-localize with the actin-regulating ARP2/3 complex. Furthermore, knockdown of OSGEP and TP53RK induces defects of the actin cytoskeleton and reduces migration rate of human podocytes, an established intermediate phenotype of SRNS. We thus identify 4 novel monogenic causes of GAMOS, describe the first link between KEOPS function and human disease, and delineate potential pathogenic mechanisms.
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- 2017
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24. Advillin acts upstream of phospholipase C ?1 in steroid-resistant nephrotic syndrome
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Amelie T. van der Ven, Weizhen Tan, Heon Yung Gee, Mohan Shenoy, Mohamad Aman Jairajpuri, Won-Il Choi, Tobias Hermle, Krisztina Fehér, Ankana Daga, Yincent Tse, Richard P. Lifton, Martin Bald, Friedhelm Hildebrandt, Sherif El Desoky, Seema Khurana, Shirlee Shril, Afig Berdeli, Svjetlana Lovric, Arvind Bagga, Jameela A. Kari, David Schapiro, Daniela A. Braun, Johanna Magdalena Schmidt, Sevgi Mir, Neveen A. Soliman, José C. Martins, Shrikant Mane, Jia Rao, Udo Helmchen, Ronen Schneider, Eugen Widmeier, Tilman Jobst-Schwan, Sudeep P. George, Jillian K. Warejko, Ahmet Nayir, Amin Esmaeilniakooshkghazi, Shazia Ashraf, and Ege Üniversitesi
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0301 basic medicine ,Male ,Nephrotic Syndrome ,030232 urology & nephrology ,Arp2/3 complex ,macromolecular substances ,Phospholipase ,Actin-Related Protein 2-3 Complex ,Podocyte ,Diglycerides ,03 medical and health sciences ,0302 clinical medicine ,Phosphoinositide Phospholipase C ,Cell Movement ,medicine ,Humans ,Pseudopodia ,Actin ,Diacylglycerol kinase ,Gene knockdown ,Phospholipase C ,biology ,Chemistry ,Podocytes ,Microfilament Proteins ,ComputerSystemsOrganization_COMPUTER-COMMUNICATIONNETWORKS ,General Medicine ,Molecular biology ,ComputingMilieux_MANAGEMENTOFCOMPUTINGANDINFORMATIONSYSTEMS ,030104 developmental biology ,medicine.anatomical_structure ,ComputingMethodologies_PATTERNRECOGNITION ,Mutation ,biology.protein ,Female ,InformationSystems_MISCELLANEOUS ,Villin - Abstract
PubMed ID: 29058690, Steroid-resistant nephrotic syndrome (SRNS) is a frequent cause of chronic kidney disease. Here, we identified recessive mutations in the gene encoding the actin-binding protein advillin (AVIL) in 3 unrelated families with SRNS. While all AVIL mutations resulted in a marked loss of its actin-bundling ability, truncation of AVIL also disrupted colocalization with F-actin, thereby leading to impaired actin binding and severing. Additionally, AVIL colocalized and interacted with the phospholipase enzyme PLCE1 and with the ARP2/3 actin-modulating complex. Knockdown of AVIL in human podocytes reduced actin stress fibers at the cell periphery, prevented recruitment of PLCE1 to the ARP3-rich lamellipodia, blocked EGF-induced generation of diacylglycerol (DAG) by PLCE1, and attenuated the podocyte migration rate (PMR). These effects were reversed by overexpression of WT AVIL but not by overexpression of any of the 3 patient-derived AVIL mutants. The PMR was increased by overexpression of WT Avil or PLCE1, or by EGF stimulation; however, this increased PMR was ameliorated by inhibition of the ARP2/3 complex, indicating that ARP-dependent lamellipodia formation occurs downstream of AVIL and PLCE1 function. Together, these results delineate a comprehensive pathogenic axis of SRNS that integrates loss of AVIL function with alterations in the action of PLCE1, an established SRNS protein., VE 196/1-1, HE 7456/1-1, Jo 1324/1-1 U.S. Public Health Service: DK-56338 National Institutes of Health: DK076683 National Institute of Diabetes and Digestive and Kidney Diseases: DK-98120 National Research Foundation of Korea, NRF: 2015R1D1A1A01056685 Department of Science and Technology, Government of Kerala NAS LPDS-2015-07 Fudan University, We are grateful to the families and study participants for their contributions. We thank the Yale Center for Mendelian Genomics (U54HG006504) for WES analysis. FH is a William E. Harmon Professor of Pediatrics. This research was supported by the NIH (DK076683, to FH); the Young Scholars Program of Children’s Hospital of Fudan University (to JR); Basic Science Research Program through the National Research Foundation of Korea 2015R1D1A1A01056685 (to HYG); DFG fellowships (VE 196/1-1, to ATvdV; Jo 1324/1-1, to TJS; and HE 7456/1-1, to TH); the German National Academy of Sciences Leopoldina (LPDS-2015-07, to EW); the Egyptian Group for Orphan Renal Diseases (EGORD) (to NAS); the Department of Science and Technology, Government of India (DST-SERB, to MAJ); the National Institute of Diabetes and Digestive and Kidney Diseases (DK-98120, to SK); and the Public Health Service (DK-56338, to SK).
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- 2017
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