2,118 results on '"Jian Xie"'
Search Results
2. Metabolomics combined with network pharmacology reveals the potential development value of Campanumoea javanica Bl. and its metabolite differences with Codonopsis Radix
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Jie Peng, Sha Liu, Xuanlin Wu, Shuo Li, Jian Xie, Yong Wang, Qiuyang Yao, Faming Wu, and Delin Zhang
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Campanumoea javanica Bl. ,Codonopsis radix ,Metabolite ,Widely targeted metabolomics ,Network pharmacology ,Botany ,QK1-989 - Abstract
Abstract Campanumoea javanica Bl. (CJ) traditionally used in Southwestern China, is now widely consumed as a health food across the nation. Due to its similar efficacy to Codonopsis Radix (CR) and their shared botanical family, CJ is often used as a substitute for CR. According to the Chinese Pharmacopoeia, Codonopsis pilosula var. modesta (Nannf.) L.T. Shen (CPM), Codonopsis pilosula (Franch.) Nannf. (CP), and Codonopsis tangshen Oliv. (CT) are the primary sources of CR. However, details on the differences in composition, effectiveness, and compositional between CJ and CR are still limited. Besides, there is little evidence to support the application of CJ as a drug. In this study, we employed widely targeted metabolomics, network pharmacology analysis, and molecular docking to explore the disparities in metabolite profiles between CJ and CR and to predict the pharmacological mechanisms of the dominant differential metabolites of CJ and their potential medicinal applications. The widely targeted metabolomics results indicated that 1,076, 1,102, 1,102, and 1,093 compounds, most phenolic acids, lipids, amino acids, and flavonoids, were characterized in CJ, CPM, CP, and CT, respectively. There were an average of 1061 shared compounds in CJ and CRs, with 95.07% similarity in metabolic profiles. Most of the metabolites in CJ were previously unreported. Twelve of the seventeen dominant metabolites found in CJ were directly associated with treating cancer and lactation, similar to the traditional medicinal efficacy. The molecular docking results showed that the dominant metabolites of CJ had good docking activity with the core targets PIK3R1, PIK3CA, ESR1, HSP90AA1, EGFR, and AKT1. This study provides a scientific basis for understanding the similarities and differences between CJ and CR at the metabolome level, offering a theoretical foundation for developing innovative medications from CJ. Additionally, it significantly enhances the metabolite databases for both CJ and CR.
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- 2024
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3. An unmanned aerial vehicle light detection and ranging Simultaneous Localisation And Mapping algorithm based on factor graph optimisation for tunnel 3D mapping
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Jian Xie, Zhuoping Wu, Bing Wang, Aoshu Xu, Yunfei Chen, and Jing Li
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autonomous aerial vehicles ,navigation ,optical radar ,optical sensors ,sensor fusion ,Telecommunication ,TK5101-6720 - Abstract
Abstract The current mature Simultaneous Localisation And Mapping (SLAM) algorithms, when applied to tunnel scenarios with point cloud degradation and poor lighting conditions, often lead to a sharp increase in the estimated attitude error of the unmanned aerial vehicle (UAV), or even prevent the UAV from moving autonomously due to severe feature degradation. To address the above problems, the authors propose a SLAM algorithm based on factor graph optimisation, Iterative Closest Point and Normal Distributions Transform algorithms. A front‐end point cloud registration module and a back‐end construction algorithm based on filtering and graph optimisation are designed. To verify the effectiveness of the proposed algorithm, experiments are conducted on KITTI dataset and real tunnel scenes, and compared with LiDAR Odometry and Mapping (LOAM) and lightweight and ground optimised (LeGO)‐LOAM algorithms. The results show that the average processing time of the proposed method is about 75 ms, which can meet the real‐time requirements of autonomous aerial vehicles. Compared with LOAM and LeGO‐LOAM in the real tunnel experiment, the proposed method shows the tunnel 3D map construction.
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- 2024
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4. The characteristics of auditorial event-related potential under propofol sedation associated with preoperative cognitive performance in glioma patients
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Xinxin Wang, Wanning Yang, Minyu Jian, Yi Liang, Zuocheng Yang, Yiwei Chen, Bo Ma, Chengwei Wang, Zonggang Hou, Zhenghai Deng, Haiyang Liu, Jian Xie, and Ruquan Han
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propofol sedation ,mild cognitive impairment ,auditory event-related potentials ,theta-ERSP ,glioma ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
BackgroundGlioma patients often experience neurocognitive deficits, particularly mild cognitive impairment (MCI), which affects their perioperative safety. The use of auditory event-related potentials (AERPs) might be a promising method for reflecting perioperative cognitive function in patients, even under unresponsive sedation. In this study, we aimed to investigate the relationships between the AERP under sedation and preoperative cognitive performance in glioma patients.MethodsPatients with primary supratentorial gliomas who were scheduled for elective craniotomy under general anesthesia were included in this prospective observational study. The patients were categorized into MCI and non-MCI groups based on their preoperative Montreal Cognitive Assessment (MoCA) scores. AERP characteristics, including mismatch negativity (MMN), P300, and event-related spectral perturbation (ERSP) in the theta bands, were analyzed under different propofol-induced sedation conditions. Differences in these parameters between groups and their relationships with preoperative cognitive performance were subsequently investigated.ResultsTwenty-nine eligible patients were included in the analysis. Compared to that in the non-MCI group, the average amplitude of the MMN component evoked by the novel stimulus significantly decreased during the recovery period in the MCI group (−3.895 ± 1.961 μV vs. -1.617 ± 1.831 μV, p = 0.003). Theta-ERSPs also differed between the two groups under standard (0.021 ± 0.658 μV2/Hz vs. 0.515 ± 0.622 μV2/Hz, p = 0.048) and novel (0.212 ± 0.584 μV2/Hz vs. 0.823 ± 0.931 μV2/Hz, p = 0.041) stimulation conditions under light sedation. After correcting for age, education level, site of lesion, WHO pathological grade and combined symptomatic epilepsy as confounders, the frontal theta-ERSP induced by standard and novel stimuli under light sedation was inversely related to the preoperative MoCA score (standard stimuli: β = −0.491, p = 0.011; novel stimuli: β = −0.594, p = 0.007), as was the average MMN amplitude induced by novel stimuli during the recovery period (β = −0.356, p = 0.035).ConclusionThe AERP neural response characteristics of glioma patients during propofol sedation were associated with preoperative cognitive performance, which might be a potential neurophysiological indicator for monitoring perioperative cognitive function, especially theta-ERSP.
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- 2024
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5. A Self‐Constructed Mg2+/K+ Co‐Doped Prussian Blue with Superior Cycling Stability Enabled by Enhanced Coulombic Attraction
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Zheng Xu, Fengqin Chen, Yinda Li, Yunhao Lu, Aijun Zhou, Jicheng Jiang, Xiongwen Xu, Jian Tu, Bin Pan, Fang Chen, Yi Huang, Xinbing Zhao, and Jian Xie
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Mg2+/K+ co‐doping ,prussian blue ,sea water ,sodium ion batteries ,sodium salts recycling ,Science - Abstract
Abstract Prussian blue (PB) is regarded as a promising cathode for sodium‐ion batteries because of its sustainable precursor elements (e.g., Mn, Fe), easy preparation, and unique framework structure. However, the unstable structure and inherent crystal H2O restrain its practical application. For this purpose, a self‐constructed trace Mg2+/K+ co‐doped PB prepared via a sea‐water‐mediated method is proposed to address this problem. The Mg2+/K+ co‐doping in the Na sites of PB is permitted by both thermodynamics and kinetics factors when synthesized in sea water. The results reveal that the introduced Mg2+ and K+ are immovable in the PB lattices and can form stronger K‒N and Mg‒N Coulombic attraction to relieve phase transition and element dissolution. Besides, the Mg2+/K+ co‐doping can reduce defect and H2O contents. As a result, the PB prepared in sea water exhibits an extremely long cycle life (80.1% retention after 2400 cycles) and superior rate capability (90.4% capacity retention at 20 C relative to that at 0.1 C). To address its practical applications, a sodium salts recycling strategy is proposed to greatly reduce the PB production cost. This work provides a self‐constructed Mg2+/K+ co‐doped high‐performance PB at a low preparation cost for sustainable, large‐scale energy storage.
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- 2024
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6. Multifunctional human serum albumin-crosslinked and self-assembling nanoparticles for therapy of periodontitis by anti-oxidation, anti-inflammation and osteogenesis
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Bangping Cao, Xuanbo Da, Wenjing Wu, Jian Xie, Xuejing Li, Xin Wang, Hui Xu, Jianfang Gao, Hui Yang, and Jiansheng Su
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Nano-enzyme ,Periodontitis ,Anti-oxidation ,Anti-inflammation ,Osteogenesis ,Medicine (General) ,R5-920 ,Biology (General) ,QH301-705.5 - Abstract
Periodontitis is a chronic inflammatory disease that can result in the irreversible loss of tooth-supporting tissues and elevate the likelihood and intensity of systemic diseases. The presence of reactive oxygen species (ROS) and associated related oxidative stress is intricately linked to the progression and severity of periodontal inflammation. Targeted removal of local ROS may serve to attenuate inflammation, improve the unfavorable periodontal microenvironment and potentially reverse ensuing pathological cascades. These ROS scavenging nanoparticles, which possess additional characteristics such as anti-inflammation and osteogenic differentiation, are highly sought after for the treatment of periodontitis. In this study, negative charged human serum albumin-crosslinked manganese-doped self-assembling Prussian blue nanoparticles (HSA-MDSPB NPs) were fabricated. These nanoparticles demonstrate the ability to scavenge multiple ROS including superoxide anion, free hydroxyl radicals, singlet oxygen and hydrogen peroxide. Additionally, HSA-MDSPB NPs exhibit the capacity to alleviate inflammation in gingiva and alveolar bone both in vitro and in vivo. Furthermore, HSA-MDSPB NPs have been shown to play a role in promoting the polarization of macrophages from the M1 to M2 phenotype, resulting in reduced production of pro-inflammatory cytokines. More attractively, HSA-MDSPB NPs have been demonstrated to enhance cellular osteogenic differentiation. These properties of HSA-MDSPB NPs contribute to decreased inflammation, extracellular matrix degradation and bone loss in periodontal tissue. In conclusion, the multifunctional nature of HSA-MDSPB NPs provides a promising therapeutic approach for the treatment of periodontitis.
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- 2024
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7. Exploring the neural link between childhood maltreatment and depression: a default mode network rs-fMRI study
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Jian Lin, Jialing Huang, Yun Wu, Linqi Zhou, Changyuan Qiao, Jian Xie, and Changchun Hu
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depression ,childhood maltreatment ,functional connectivity ,independent component analysis (ICA) ,default mode network (DMN) ,Psychiatry ,RC435-571 - Abstract
BackgroundChildhood maltreatment (CM) is increasingly recognized as a significant risk factor for major depressive disorder (MDD), yet the neural mechanisms underlying the connection between CM and depression are not fully understood. This study aims to deepen our understanding of this relationship through neuroimaging, exploring how CM correlates with depression.MethodsThe study included 56 MDD patients (33 with CM experiences and 23 without) and 23 healthy controls. Participants were assessed for depression severity, CM experiences, and underwent resting-state functional MRI scans. Independent Component Analysis was used to examine differences in functional connectivity (FC) within the Default Mode Network (DMN) among the groups.ResultsMDD patients with CM experiences exhibited significantly stronger functional connectivity in the left Superior Frontal Gyrus (SFG) and right Anterior Cingulate Cortex (ACC) within the DMN compared to both MDD patients without CM experiences and healthy controls. FC in these regions positively correlated with Childhood Trauma Questionnaire scores. Receiver Operating Characteristic (ROC) curve analysis underscored the diagnostic value of FC in the SFG and ACC for identifying MDD related to CM. Additionally, MDD patients with CM experiences showed markedly reduced FC in the left medial Prefrontal Cortex (mPFC) relative to MDD patients without CM experiences, correlating negatively with Childhood Trauma Questionnaire scores.ConclusionOur findings suggest that increased FC in the ACC and SFG within the DMN is associated with CM in MDD patients. This enhanced connectivity in these brain regions is key to understanding the predisposition to depression related to CM.
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- 2024
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8. Adaptive interference mitigation space‐time array reconfiguration by joint selection of antenna and delay tap
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Yandong Sun, Jian Xie, Yanyun Gong, Zhaolin Zhang, and Ling Wang
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adaptive antenna arrays ,adaptive signal processing ,array signal processing ,interference suppression ,satellite navigation ,Telecommunication ,TK5101-6720 - Abstract
Abstract Space‐time adaptive processing (STAP) array has found extensive use in the global navigation satellite system for interference suppression. Nevertheless, the conventional space‐time array necessitates multiple antennas and time delay taps, resulting in a heavy burden on both hardware and computation resources. Thus, lowering the cost and complexity of STAP becomes a considerable problem demanding prompt solutions. This work designs a space‐time array reconfiguration scheme based on the joint selection strategy of the antenna and delay tap to address this problem. The reconstructed array can induce a high signal to interference plus noise power ratio (SINR) when using fewer antennas and delay taps. The space‐time correlation coefficient (STCC) is first presented to manifest the influence of reconfiguration on output SINR. Then, we formulate the space‐time array reconfiguration mathematical model, aiming to minimise STCC. Two reconfiguration methods are provided to solve the optimal array configuration of antennas and delay taps that can reach the minimum STCC and maximum SINR. The optimal antenna‐delay tap pairs are finally selected to comprise the reconstructed array. Substantial simulation experiments verify that the presented scheme and strategy are effective and reliable in space‐time array reconfiguration.
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- 2024
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9. Inhibition of OGFOD1 by FG4592 confers neuroprotection by activating unfolded protein response and autophagy after ischemic stroke
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Jian Xie, Yuan Zhang, Bin Li, Wen Xi, Yu Wang, Lu Li, Chenchen Liu, Ling Shen, Bing Han, Yan Kong, HongHong Yao, and Zhijun Zhang
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FG4592 ,Ischemic stroke ,OGFOD1 ,Unfolded protein response ,Autophagy ,Medicine - Abstract
Abstract Background Acute ischemic stroke is a common neurological disease with a significant financial burden but lacks effective drugs. Hypoxia-inducible factor (HIF) and prolyl hydroxylases (PHDs) participate in the pathophysiological process of ischemia. However, whether FG4592, the first clinically approved PHDs inhibitor, can alleviate ischemic brain injury remains unclear. Methods The infarct volumes and behaviour tests were first analyzed in mice after ischemic stroke with systemic administration of FG4592. The knockdown of HIF-1α and pretreatments of HIF-1/2α inhibitors were then used to verify whether the neuroprotection of FG4592 is HIF-dependent. The targets predicting and molecular docking methods were applied to find other targets of FG4592. Molecular, cell biological and gene knockdown methods were finally conducted to explore the potential neuroprotective mechanisms of FG4592. Results We found that the systemic administration of FG4592 decreased infarct volume and improved neurological defects of mice after transient or permanent ischemia. Meanwhile, FG4592 also activated autophagy and inhibited apoptosis in peri-infarct tissue of mice brains. However, in vitro and in vivo results suggested that the neuroprotection of FG4592 was not classical HIF-dependent. 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 (OGFOD1) was found to be a novel target of FG4592 and regulated the Pro-62 hydroxylation in the small ribosomal protein s23 (Rps23) with the help of target predicting and molecular docking methods. Subsequently, the knockdown of OGFOD1 protected the cell against ischemia/reperfusion injury and activated unfolded protein response (UPR) and autophagy. Moreover, FG4592 was also found to activate UPR and autophagic flux in HIF-1α independent manner. Blocking UPR attenuated the neuroprotection, pro-autophagy effect and anti-apoptosis ability of FG4592. Conclusion This study demonstrated that FG4592 could be a candidate drug for treating ischemic stroke. The neuroprotection of FG4592 might be mediated by inhibiting alternative target OGFOD1, which activated the UPR and autophagy and inhibited apoptosis after ischemic injury. The inhibition of OGFOD1 is a novel therapy for ischemic stroke.
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- 2024
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10. Traditional knowledge of animal-derived medicines used by Gelao community in Northern Guizhou, China
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Xiaoqi Liu, Shuo Li, Yi Feng, Xingxing Chen, Yuhan Ma, Hai Xiao, Yongxia Zhao, Sha Liu, Guishen Zheng, Xiujuan Yang, Faming Wu, and Jian Xie
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Ethnobiology ,Gelao ethnicity ,Traditional medicine ,Animal-derived medicines ,Sustainable utilization ,Other systems of medicine ,RZ201-999 ,Botany ,QK1-989 - Abstract
Abstract Introduction This study aims to document and preserve the traditional medicinal knowledge of the Gelao community in Northern Guizhou, China, providing valuable insights for modern pharmacological research and the development of these traditional remedies. Methods Our methodology encompassed a blend of literature review, community interviews, and participatory observation to delve into the traditional knowledge of animal-derived medicines among the Gelao community. We employed quantitative ethnological and ecological assessment techniques to evaluate the significance of these practices. Informed consent was secured before conducting interviews, with a focus on ascertaining the types of medicines familiar to the informants, including their local names, sources, methods of preparation, application techniques, diseases treated, frequency of use, and safety considerations. Results Our research cataloged 55 varieties of animal-derived medicines utilized by the Gelao people. Out of these, 34 originate from wild animals, mainly encompassing small insects, reptiles, and aquatic species; the remaining 21 are derived from domesticated animals, largely involving their tissues, organs, and various physiological or pathological by-products. These medicines are primarily applied in treating pediatric ailments (13 types), internal disorders (11 types), gynecological issues (3 types), dermatological problems (7 types), ENT conditions (3 types), trauma-related injuries (5 types), joint and bone ailments (5 types), infections (2 types), dental issues (2 types), and urolithiasis (1 type), with three types being used for other miscellaneous conditions. Commonly utilized medicines, such as honey, Blaps beetle, chicken gallstones, and snake-based products, are preferred for their availability, edibility, and safety within the Gelao communities. Conclusion The Gelao community’s traditional medicines represent a rich diversity of animal sources, showcasing extensive expertise and knowledge in their processing and clinical applications. This wealth of traditional knowledge offers novel perspectives for the contemporary pharmacological study and development of these remedies. Additionally, our research plays a crucial role in aiding the preservation and continuation of this invaluable cultural heritage.
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- 2024
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11. Algorithms and statistical analysis for linear structured weighted total least squares problem
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Jian Xie, Tianwei Qiu, Cui Zhou, Dongfang Lin, and Sichun Long
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Linear structured weighted total least squares ,Errors-in-variables ,Errors-in-observations ,Functional model modification ,Stochastic model modification ,Accuracy evaluation ,Geodesy ,QB275-343 ,Geophysics. Cosmic physics ,QC801-809 - Abstract
Weighted total least squares (WTLS) have been regarded as the standard tool for the errors-in-variables (EIV) model in which all the elements in the observation vector and the coefficient matrix are contaminated with random errors. However, in many geodetic applications, some elements are error-free and some random observations appear repeatedly in different positions in the augmented coefficient matrix. It is called the linear structured EIV (LSEIV) model. Two kinds of methods are proposed for the LSEIV model from functional and stochastic modifications. On the one hand, the functional part of the LSEIV model is modified into the errors-in-observations (EIO) model. On the other hand, the stochastic model is modified by applying the Moore-Penrose inverse of the cofactor matrix. The algorithms are derived through the Lagrange multipliers method and linear approximation. The estimation principles and iterative formula of the parameters are proven to be consistent. The first-order approximate variance-covariance matrix (VCM) of the parameters is also derived. A numerical example is given to compare the performances of our proposed three algorithms with the STLS approach. Afterwards, the least squares (LS), total least squares (TLS) and linear structured weighted total least squares (LSWTLS) solutions are compared and the accuracy evaluation formula is proven to be feasible and effective. Finally, the LSWTLS is applied to the field of deformation analysis, which yields a better result than the traditional LS and TLS estimations.
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- 2024
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12. Study on advanced partial least squares for quality-related fault detection
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Guisheng Zhang, Qingyi Tu, and Jian Xie
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Control engineering systems. Automatic machinery (General) ,TJ212-225 ,Technology (General) ,T1-995 - Abstract
The issue of quality-related fault detection in the industrial process has attracted much attention in recent years. The partial least squares (PLS) is considered an efficient tool for predicting and monitoring. The modified partial least squares (MPLS) is an extended algorithm for solving the oblique decomposition of PLS, however, the study indicated that the loss of quality variable information may affect the prediction of quality information in the decomposition process of the MPLS algorithm. Furthermore, the detection rate of traditional statistics and static control limit is low, and the existing dynamic control limit has certain limitations. Therefore, a new PLS space-decomposition algorithm called advanced partial least squares (APLS) is proposed. APLS avoids the loss of quality information by orthogonal decomposition of process variables according to their relationship with quality. APLS has a more accurate prediction of quality when process variables contain more noise; the fault false alarm rates (FAR) of quality-related faults are reduced by using the new statistics and thresholds combined with local information increment technology in the process variable principal component subspace. Finally, the effectiveness of the proposed approach is verified by a numerical example and an industrial benchmark problem.
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- 2024
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13. New natural protein tyrosine phosphatase 1B inhibitors from Gynostemma pentaphyllum
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Xianting Wang, Yidan Deng, Jianmei Wang, Lin Qin, Yimei Du, Qianru Zhang, Di Wu, Xingdong Wu, Jian Xie, Yuqi He, and Daopeng Tan
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Gynostemma pentaphyllum ,protein tyrosine phosphatase 1B ,α-glucosidase ,α-amylase ,phytochemistry ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Type 2 diabetes mellitus (T2DM) is a chronic metabolic disease mainly caused by insulin resistance, which can lead to a series of complications such as cardiovascular disease, retinopathy, and its typical clinical symptom is hyperglycaemia. Glucosidase inhibitors, including Acarbose, Miglitol, are commonly used in the clinical treatment of hypoglycaemia. In addition, Protein tyrosine phosphatase 1B (PTP1B) is also an important promising target for the treatment of T2DM. Gynostemma pentaphyllum is a well-known oriental traditional medicinal herbal plant, and has many beneficial effects on glucose and lipid metabolism. In the present study, three new and nine known dammarane triterpenoids isolated from G. pentaphyllum, and their structures were elucidated by spectroscopic methods including HR-ESI-MS,1H and 13C NMR and X-ray crystallography. All these compounds were evaluated for inhibitory activity against α-glucosidase, α-amylase and PTP1B. The results suggested that compounds 7∼10 were potential antidiabetic agents with significantly inhibition activity against PTP1B in a dose-dependent manner.
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- 2024
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14. Toward Zero-Net bidirectional power transfer in Low-Voltage smart microgrids
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Qusay Salem and Jian Xie
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Simulation based optimization ,Power flow algorithm ,Smart Microgrid ,P-U droop ,Distributed Generator ,Production of electric energy or power. Powerplants. Central stations ,TK1001-1841 - Abstract
This paper presents a new approach for controlling the bidirectional active power flow using a series voltage source inverter placed in between the microgrid and the main grid in LV distribution network. Implementing the control operation of the series VSI resembles the form of a simulation-based optimization where a novel overall power flow algorithm is implemented to investigate the system behavior. This algorithm considers controlling the active power of the series VSI and the active power between the main grid and the microgrid to zero net energy. The algorithm has three nested levels working together to satisfy an active power reference at PCC. The results revealed in this paper are (1) investigating different settings for the DG droop characteristics to determine the limits of the proposed approach and (2) regulating the magnitude and phase angle of the series VSI according to a desired active power reference at PCC. The obtained results confirm the effectiveness and feasibility of the proposed approach and the capability of the overall power flow algorithm in satisfying the zero-net power transfer target.
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- 2024
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15. Comprehensive analysis of hypoxia-related genes in diagnosis and immune infiltration in acute myocardial infarction: based on bulk and single-cell RNA sequencing data
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Guoqing Liu, Wang Liao, Xiangwen Lv, Miaomiao Zhu, Xingqing Long, and Jian Xie
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acute myocardial infarction ,hypoxia ,diagnostic model ,single-cell analysis ,immune infiltration ,Biology (General) ,QH301-705.5 - Abstract
BackgroundHypoxia has been found to cause cellular dysfunction and cell death, which are essential mechanisms in the development of acute myocardial infarction (AMI). However, the impact of hypoxia-related genes (HRGs) on AMI remains uncertain.MethodsThe training dataset GSE66360, validation dataset GSE48060, and scRNA dataset GSE163956 were downloaded from the GEO database. We identified hub HRGs in AMI using machine learning methods. A prediction model for AMI occurrence was constructed and validated based on the identified hub HRGs. Correlations between hub HRGs and immune cells were explored using ssGSEA analysis. Unsupervised consensus clustering analysis was used to identify robust molecular clusters associated with hypoxia. Single-cell analysis was used to determine the distribution of hub HRGs in cell populations. RT-qPCR verified the expression levels of hub HRGs in the human cardiomyocyte model of AMI by oxygen-glucose deprivation (OGD) treatment in AC16 cells.ResultsFourteen candidate HRGs were identified by differential analysis, and the RF model and the nomogram based on 8 hub HRGs (IRS2, ZFP36, NFIL3, TNFAIP3, SLC2A3, IER3, MAFF, and PLAUR) were constructed, and the ROC curves verified its good prediction effect in training and validation datasets (AUC = 0.9339 and 0.8141, respectively). In addition, the interaction between hub HRGs and smooth muscle cells, immune cells was elucidated by scRNA analysis. Subsequently, the HRG pattern was constructed by consensus clustering, and the HRG gene pattern verified the accuracy of its grouping. Patients with AMI could be categorized into three HRG subclusters, and cluster A was significantly associated with immune infiltration. The RT-qPCR results showed that the hub HRGs in the OGD group were significantly overexpressed.ConclusionA predictive model of AMI based on HRGs was developed and strongly associated with immune cell infiltration. Characterizing patients for hypoxia could help identify populations with specific molecular profiles and provide precise treatment.
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- 2024
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16. Connectomic insights into the impact of 1p/19q co-deletion in dominant hemisphere insular glioma patients
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Zuo-cheng Yang, Bo-wen Xue, Xin-yu Song, Chuan-dong Yin, Fang-cheng Yeh, Gen Li, Zheng-hai Deng, Sheng-jun Sun, Zong-gang Hou, and Jian Xie
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insular gliomas ,1p/19q co-deletion ,structural connectivity ,graph theoretical networks ,tractography ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
ObjectivesThis study aimed to elucidate the influences of 1p/19q co-deletion on structural connectivity alterations in patients with dominant hemisphere insular diffuse gliomas.MethodsWe incorporated 32 cases of left insular gliomas and 20 healthy controls for this study. Using diffusion MRI, we applied correlational tractography, differential tractography, and graph theoretical analysis to explore the potential connectivity associated with 1p/19q co-deletion.ResultsThe study revealed that the quantitative anisotropy (QA) of key deep medial fiber tracts, including the anterior thalamic radiation, superior thalamic radiation, fornix, and cingulum, had significant negative associations with 1p/19q co-deletion (FDR = 4.72 × 10–5). These tracts are crucial in maintaining the integrity of brain networks. Differential analysis further supported these findings (FWER-corrected p < 0.05). The 1p/19q non-co-deletion group exhibited significantly higher clustering coefficients (FDR-corrected p < 0.05) and reduced betweenness centrality (FDR-corrected p < 0.05) in regions around the tumor compared to HC group. Graph theoretical analysis indicated that non-co-deletion patients had increased local clustering and decreased betweenness centrality in peritumoral brain regions compared to co-deletion patients and healthy controls (FDR-corrected p < 0.05). Additionally, despite not being significant through correction, patients with 1p/19q co-deletion exhibited lower trends in weighted average clustering coefficient, transitivity, small worldness, and global efficiency, while showing higher tendencies in weighted path length compared to patients without the co-deletion.ConclusionThe findings of this study underline the significant role of 1p/19q co-deletion in altering structural connectivity in insular glioma patients. These alterations in brain networks could have profound implications for the neural functionality in patients with dominant hemisphere insular gliomas.
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- 2024
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17. Identification of mitochondria-related gene biomarkers associated with immune infiltration in acute myocardial infarction
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Guoqing Liu, Min Wang, Xiangwen Lv, Yuting Guan, Jingqi Li, and Jian Xie
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Bioinformatics ,Cardiovascular medicine ,Clinical genetics ,Science - Abstract
Summary: Mitochondrial dysfunction has been known to contribute to the worsening of acute myocardial infarction (AMI). We screened differentially expressed genes (DEGs) between AMI and healthy individuals based on the GSE66360 dataset. We took the intersection of the obtained DEGs with 1,136 mitochondria-related genes. Finally, we screened out mitochondria-related DEGs (MitoDEGs). Eight MitoDEGs were identified as hub genes based on the random forest algorithm. Two mitochondria-related robust molecular clusters were identified by consensus clustering. Immune infiltration analysis showed that immune cell infiltration was significantly increased in the high-expression group of MitoDEGs. We obtained the potential drugs targeted at ALDH2, PMAIP1, and BCL2A1, such as disulfiram, obatoclax mesylate, and bortezomib. Quantitative reverse-transcription polymerase chain reaction further validated the expression of the MitoDEGs in the cell model of AMI. These findings reveal the potential role of MitoDEGs in AMI and provide new insights into risk stratification and individualized treatment of AMI patients.
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- 2024
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18. Survival outcome and predictors of WHO grade 2 and 3 insular gliomas: A classification based on the tumor spread
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Bowen Xue, Zonggang Hou, Zhenghai Deng, Shengjun Sun, Chuanhao Zhang, Yuesong Pan, Yazhuo Zhang, Zhenye Li, and Jian Xie
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classification ,insular glioma ,limbic system ,oncology ,paralimbic system ,survival analysis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Objective The study aimed to identify if clinical features and survival outcomes of insular glioma patients are associated with our classification based on the tumor spread. Methods Our study included 283 consecutive patients diagnosed with histological grade 2 and 3 insular gliomas. A new classification was proposed, and tumors restricted to the paralimbic system were defined as type 1. When tumors invaded the limbic system (referred to as the hippocampus and its surrounding structures in this study) simultaneously, they were defined as type 2. Tumors with additional internal capsule involvement were defined as type 3. Results Tumors defined as type 3 had a higher age at diagnosis (p = 0.002) and a higher preoperative volume (p
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- 2024
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19. Effect of Chinese Milk Vetch on Zinc Content and Zinc Absorption of Rice in Purple Tidal Mud Soil
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Zengping Yang, Zhongxiu Rao, Hailu Li, Zedong Long, Xianjun Zeng, and Jian Xie
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Chinese milk vetch ,purple tidal mud substrate ,rice yield ,rice zinc ,zinc absorption ,Agriculture - Abstract
Rice is a staple food crop that feeds billions globally. Addressing Zn deficiency in rice is crucial for improving nutrition and food security. Zn deficiency in rice is a widespread issue, especially in purple tidal mud substrates, which often exhibit low Zn availability. The objective of this two-year pot study was to explore the relationship between Zn content, yield components, and Zn absorption in rice grown in purple tidal mud substrate with varying amounts of Chinese milk vetch (Astragalus sinicus L.) incorporation. The experimental design consisted of seven treatments: an unfertilized control, a Chinese milk vetch control, a chemical fertilizer control, and four treatment variations incorporating Chinese milk vetch alongside chemical fertilizer applications. The results indicated that planting and applying Chinese milk vetch improved the grain yield of rice in purple tidal mud substrate, and the yield increased with higher levels of Chinese milk vetch applied. The increased grain yield resulted in higher Zn absorption in rice grains. The application of Chinese milk vetch, both solely and in combination with chemical fertilizers, had varying effects on zinc uptake and grain zinc formation efficiency in early and late rice, with the control and low-level Chinese milk vetch treatments generally exhibiting the highest performance across the two-year period. By introducing Chinese milkvetch following the use of chemical fertilizers, the Zn content in rice grains increased starting from the second year. The treatment with Chinese milkvetch applied at a rate of 2.25 t/hm2 showed the best results in increasing the Zn content in rice grains. The increase in Zn content and Zn uptake by the rice plants gave rise to a lowering of the DTPA-extractable Zn content in the purple tidal mud substrate. Sole Chinese milk vetch application and using Chinese milk vetch following chemical fertilizer application both increased Zn content extracted by DTPA in purple tidal mud substrate.
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- 2024
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20. Research on Safety Risk Evaluation System for Seepage in Ship Lock Foundation Pit Engineering
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Jianhong Huang, Jian Xie, and Honglei Ren
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ship lock engineering ,foundation pit ,risk assessment ,finite element method (FEM) ,evaluation index system ,seepage safety ,Building construction ,TH1-9745 - Abstract
Ship lock project currently demonstrates a distinct cyclical pattern, accumulating latent hazards that pose a significant threat to project safety. Seepage safety (the condition in which the seepage risk is reduced to an acceptable level) serves as a crucial indicator in the safety risk assessment index system for ship lock project construction, thus necessitating an in-depth analysis of the risk factors impacting seepage safety. Utilizing a ship lock project in China as a case study, this study employs the finite element method (FEM) to analyze the seepage field of the ship lock foundation pit basin and proposes a comprehensive set of methods for risk evaluation and warning models pertaining to seepage safety risks in ship lock engineering. This study reveals that the obstruction of dewatering wells and imperfections in the diaphragm wall are the primary factors contributing to seepage damage. The investigation conducted a quantitative analysis of the impact of these two factors on the seepage field of the ship lock pit, considering pore pressure, water head, gradient, and flow velocity. A comprehensive set of evaluation indicators for seepage safety was formulated, drawing on the principles of multi-objective optimization, and a method for delineating the safe range of ship lock pit excavation under seepage action was proposed. Subsequently, an integrated seepage safety risk assessment system for ship lock pit excavation engineering was established. These research findings offer a scientific foundation for the management of seepage safety in ship lock pit excavation engineering and provide valuable references and guidance for the development of anti-seepage systems.
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- 2024
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21. USP22 as a key regulator of glycolysis pathway in osteosarcoma: insights from bioinformatics and experimental approaches
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Qiao Zhang, Jinwei Zhu, Jian Xie, Yurong Gu, and Lu Chen
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Ubiquitin-specific processing peptidase 22 (USP22) ,Osteosarcoma ,Glycolysis ,Bioinformatics ,Experimental validation ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Background Osteosarcoma is the most common primary malignant bone tumor, but its pathogenesis remains unclear. Ubiquitin-specific processing peptidase 22 (USP22) is reported to be highly expressed and associated with tumor malignancy and prognosis in cancers. However, the role and mechanism of USP22 in osteosarcoma is not fully understood. This study aims to investigate the function and potential mechanism of USP22 in osteosarcoma using bioinformatics analysis combined with experimental validation. Methods We first integrated transcriptomic datasets and clinical information of osteosarcoma from GEO and TCGA databases to assess the expression and prognostic value of USP22 in osteosarcoma. Then, differential expression analysis and weighted gene co-expression network analysis (WGCNA) were conducted to identify USP22-related co-expressed genes. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed to explore the biological functions and signaling pathways of USP22 co-expressed genes. To validate the accuracy of bioinformatics analyses, we downregulated USP22 expression in osteosarcoma cell line Sao-2 using siRNA and assessed its effect on cell proliferation, migration, invasion, apoptosis, and regulation of key signaling pathways. Results We found that USP22 was highly expressed in osteosarcoma tissues and correlated with poor prognosis in osteosarcoma patients. USP22 also showed potential as a diagnostic marker for osteosarcoma. In addition, 344 USP22-related co-expressed genes were identified, mainly involved in signaling pathways such as glycolysis, oxidative phosphorylation, spliceosome, thermogenesis, and cell cycle. The in vitro experiments confirmed the accuracy and reliability of bioinformatics analyses. We found that downregulation of USP22 could inhibit Sao-2 cell proliferation, migration, invasion, and induce apoptosis. Furthermore, downregulation of USP22 significantly reduced aerobic glycolysis levels in Sao-2 cells and inhibited the expression of key enzymes and transporters in aerobic glycolysis pathways such as HK2, PKM2, and GLUT1. Conclusions USP22 plays a critical role in the occurrence, development, and prognosis of osteosarcoma. USP22 could influence Sao-2 cell proliferation, apoptosis, migration, and invasion by regulating the glycolysis pathway, thereby promoting osteosarcoma progression. Therefore, USP22 may be a potential therapeutic target for the treatment of osteosarcoma.
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- 2024
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22. Advancements and challenges in pharmacokinetic and pharmacodynamic research on the traditional Chinese medicine saponins: a comprehensive review
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Yuhan Ma, Yongxia Zhao, Mingxia Luo, Qin Jiang, Sha Liu, Qi Jia, Zhixun Bai, Faming Wu, and Jian Xie
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saponins ,traditional Chinese medicine ,pharmacokinetics ,bioavailability ,influencing factors ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Recent research on traditional Chinese medicine (TCM) saponin pharmacokinetics has revealed transformative breakthroughs and challenges. The multicomponent nature of TCM makes it difficult to select representative indicators for pharmacokinetic studies. The clinical application of saponins is limited by their low bioavailability and short half-life, resulting in fluctuating plasma concentrations. Future directions should focus on novel saponin compounds utilizing colon-specific delivery and osmotic pump systems to enhance oral bioavailability. Optimizing drug combinations, such as ginsenosides with aspirin, shows therapeutic potential. Rigorous clinical validation is essential for practical applications. This review emphasizes a transformative era in saponin research, highlighting the need for clinical validation. TCM saponin pharmacokinetics, guided by traditional principles, are in development, utilizing multidisciplinary approaches for a comprehensive understanding. This research provides a theoretical basis for new clinical drugs and supports rational clinical medication.
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- 2024
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23. Anti-inflammatory and protective effects of Pimpinella candolleana on ulcerative colitis in rats: a comprehensive study of quality, chemical composition, and molecular mechanisms
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Xiaoqi Liu, Hai Xiao, Mingxia Luo, Junpeng Meng, Lin Zhong, Tao Wu, Yongxia Zhao, Faming Wu, and Jian Xie
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Pimpinella candolleana Wight et Arn. ,ulcerative colitis ,quality evaluation ,anti-inflammatory ,molecular mechanism ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Introduction:P. candolleana Wight et Arn. Is a traditional Chinese herbal medicine used by the Gelao nationality in southwest China, has been historically applied to treat various gastrointestinal disorders. Despite its traditional usage, scientific evidence elucidating its efficacy and mechanisms in treating ulcerative colitis (UC) remains sparse. This study aimed to determine the quality and chemical composition of Pimpinella candolleana and to identify its potential therapeutic targets and mechanisms in acetic acid-induced ulcerative colitis (UC) rats through integrated approaches.Methods: Morphological and microscopic characteristics, thin layer chromatography (TLC) identification, and quantitative analysis of P. candolleana were performed. UPLC-Q-TOF-MS, network pharmacology, and molecular docking were used to identify its chemical composition and predict its related targets in UC. Furthermore, a rat model was established to evaluate the therapeutic effect and potential mechanism of P. candolleana on UC.Results: Microscopic identification revealed irregular and radial arrangement of the xylem in P. candolleana, with a light green cross-section and large medullary cells. UPLC-Q-TOF-MS analysis detected and analyzed 570 metabolites, including flavonoids, coumarins, and terpenoids. Network pharmacology identified 12 effective components and 176 target genes, with 96 common targets for P. candolleana-UC, including quercetin, luteolin, and nobiletin as key anti-inflammatory components. GO and KEGG revealed the potential involvement of their targets in RELA, JUN, TNF, IKBKB, PTGS2, and CHUK, with action pathways such as PI3K-Akt, TNF, IL-17, and apoptosis. Molecular docking demonstrated strong affinity and binding between these key components (quercetin, luteolin, and nobiletin) and the key targets of the pathway, including JUN and TNF. Treatment with P. candolleana improved body weight loss, the disease activity index, and colonic histological damage in UC rats. Pimpinella candolleana also modulated the levels of IL-2 and IL-6 in UC rats, reduced the expression of pro-inflammatory cytokines such as IL-6, MAPK8, TNF-α, CHUK, and IKBKB mRNA, and decreased the expression of TNF, IKBKB, JUN, and CHUK proteins in the colon of UC rats, thereby reducing inflammation and alleviating UC symptoms.Conclusion:P. candolleana exerts its protective effect on UC by reducing the expression of proinflammatory cytokines and inhibiting inflammation, providing scientific evidence for its traditional use in treating gastrointestinal diseases. This study highlights the potential of P. candolleana as a natural therapeutic agent for UC and contributes to the development of novel medicines for UC treatment.
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- 2024
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24. Ethnobotanical study of traditional forage plants in the Gansu–Ningxia–Inner Mongolia junction zone: conservation and sustainable utilization for animal husbandry
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Jian Xie, Xiaoqi Liu, Mingxia Luo, Fusong Liu, Sha Liu, Yongxia Zhao, Xingsheng Zhang, Wenji Zhao, and Faming Wu
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Ethnobotany ,Forage plants ,Sustainable utilization ,Conservation ,Animal husbandry ,Other systems of medicine ,RZ201-999 ,Botany ,QK1-989 - Abstract
Abstract Introduction This study aims to safeguard the ethnobotanical knowledge pertaining to traditional forage plants within the ethnically diverse Gansu–Ningxia–Inner Mongolia junction zone. It seeks to establish a foundation for the sustainable utilization of these traditional resources for animal husbandry. Methods A combination of literature research, village interviews, participatory observation, and ethnobotanical quantitative evaluation methods was employed to investigate and study the traditional knowledge of wild forage plants used by local residents in the study area. Results Local residents provided information on 73 forage plants, which were identified as 116 distinct wild forage plant species. These plants belong to 22 families and play an active role in the lives of the local inhabitants. Notably, the families Poaceae, Fabaceae, and Asteraceae are prominent, comprising the most abundant and widely utilized wild forage plants. Bing Cao (collectively referring to plants of the Agropyron, Leymus, and Psammochloa), Suo Cao (collectively referring to plants of the genus Stipa), and Ku Cai (encompassing Lactuca tatarica (L.) C.A.Mey. and Ixeris polycephala Cass.) emerge as the most representative and vital wild forage plants for animal husbandry. Additionally, plants within the Astragalus (referred to collectively as NiaoZi by local residents) in the Fabaceae family, as well as plants from the Amaranthaceae family, exhibit notable significance. Conclusion Animal husbandry assumes a pivotal role in the local agricultural economy, and the 116 wild forage plants investigated hold substantial importance in its development. Among these, 59 and 103 plant resources display high developmental potential, making them prospective candidates for high-quality cultivated forage grasses. Additionally, extensive grazing practices have resulted in significant ecological degradation within this already fragile ecosystem. The cultivation of forage grasses and the practice of pen-based animal husbandry may emerge as crucial strategies for sustainable development in this area.
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- 2023
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25. Grouting reconstruction of loose aquifer overlying work face and its effect test
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Jian XIE, Daqiang XU, Wei HU, and Peisen ZHANG
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mining engineering ,loose aquifer ,grouting transformation ,slurry diffusion ,effect of inspection ,Mining engineering. Metallurgy ,TN1-997 - Abstract
In order to liberate the shallow quaternary loose aquifer coal pillar resources, taking the 1010-1 working face of the first mining area of Wugou Coal Mine as the test object, the grouting reinforcement test of quaternary loose aquifer and the weathering zone of the bedrock at the bottom was carried out by using the splitting grouting method and the grouting technology combining continuous and intermittent grouting. The results show that: the quaternary loose aquifer control area has complex lithology and weak water content, and mainly receives runoff recharge from the lateral area. The grouting reconstruction project adopts the water displacement and sand fixation scheme of the ground straight hole combined with the directional oblique hole row by row; the strength of the mixed slurry is subject to the ratio of fly ash, and the strength and stone rate of the mixed slurry are higher than those of the cement net slurry. When the fly ash content is 20%, the stone rate is the highest; the diffusion of grout in the quaternary loose aquifer is very uneven, the grouting process needs to control the grout diffusion range by controlling the grouting amount, the influence of grouting on the surface is reflected in the grout diffusion and pressure conduction, and the pressure conduction is the main one; after injection, the true density and water content of the core hole samples slightly increased, while the compressive strength, tensile strength and shear strength slightly increased; with the increase of sampling depth, the compressive strength of the rock layer in the wind-oxidized zone of bedrock increased first, then decreased and then increased, and the compressive strength increased about 2-5 times.
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- 2023
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26. Feasibility study on reducing protective coal pillar of F6 fault in Wugou Coal Mine
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Daokun WANG, Hui NIU, Jian XIE, Wei HU, and Peisen ZHANG
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wugou coal mine ,floor water inrush ,fault activation ,reserved width of coal pillar ,grouting reinforcement ,Mining engineering. Metallurgy ,TN1-997 - Abstract
According to the specific geological conditions, taking F6 fault of Wugou Coal Mine as the research object, combined with the research of fault and the floor limestone water in the area of space distribution relationship, numerical simulation and theoretical analysis are used to analyze the water inrush risk of different widths of coal pillars, and theoretical calculation is used to determine the reasonable width of coal pillars before F6 fault treatment, at the same time, considering the 3D seismic exploration results of F6 fault and the data of underground excavation, the grouting reinforcement range of the lower aquifer is analyzed theoretically. Combining the results of theoretical calculation and numerical simulation, the feasibility of reducing the coal pillar of F6 fault is studied. The research results have important significance for improving the recovery rate of coal resources in Wugou Coal Mine.
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- 2023
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27. Evolution and coupling of 'seepage field and chemical field' under regional grouting disturbance
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Yan GUO, Herong GUI, Jiuchuan WEI, Mancong HU, Xiangdong GUO, Feng NIE, Yongqing CHEN, Jian XIE, Shuang YE, and Jun LI
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regional grouting disturbance ,coupling of seepage field and chemical field ,solute diffusion prediction model ,numerical simulation using feflow software ,Mining engineering. Metallurgy ,TN1-997 - Abstract
In Huaibei coalfield, the technology of ground directional drilling and high-pressure grouting is widely used to control the karst water disaster of coal measures floor. After grouting, the filling and drainage path of the seepage field changes, and the grouting high pressure and the slurry water will change the distribution characteristics of the groundwater seepage field and chemical field of the injected target aquifer in a certain period of time. Taking Taoyuan Coal Mine in Huaibei Coalfield as the research object, the evolution model of seepage field and chemical field (referred to as “double field”) of the target layer under regional grouting disturbance is built by using the software of Feflow, the coupling mechanism of “double field” is discussed, and the Cl− which is less affected by the environment is selected as the simulation factor, and the analysis of the factors affecting solute transport under the “double field” coupling effect is carried out. On this basis, the mathematical model of solute diffusion under regional grouting disturbance is constructed. The results show that in the seepage field model after identification and verification, 71.9% of the points where the error between the simulated water level and the measured water level is less than 3m, and the simulation effect is good; Among the identified and verified chemical field models, the simulation effect of solute transport in mining area II4 is good, and the simulation value in mining area II1 is about 14.4 mg/L lower, with an error of about 6.6% of the actual value, less than 10%. The overall simulation effect is good. The Cl− in mining area II4 and II2 with relatively high permeability coefficient is easy to migrate and diffuse, while the rock in mining area II1 with low permeability coefficient is dense and has poor permeability. During the 50 years of model operation, it basically exists in the state of “stagnant water”. Based on the evolution characteristics of local seepage field in II4 mining area under grouting disturbance, it is considered that solute transport is mainly controlled by permeability coefficient, dispersion, hydraulic gradient, seepage velocity, grouting time, slurry specific gravity and other parameters. It is found that the concentration of Cl− reaches a peak within 18−22 years after the completion of grouting, and then begins to decrease, and reaching the equilibrium state before regional grouting approximately 40 years later. Based on the data obtained from multiple parameter setting operations, a mathematical model of solute diffusion under the “double field” coupling is established. The data with error rate less than 10% accounts for 81.4%, which indicates that the established mathematical model of solute diffusion is basically reliable. This study can provide scientific basis for the study of the water environment evolution of the injected target aquifer under the regional grouting disturbance and the prediction and early warning of coal mine water disasters, and has important theoretical and practical significance.
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- 2023
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28. Off-grid direction-of-arrival estimation for wideband noncircular sources
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Xiaoyu Zhang, Haihong Tao, Ziye Fang, and Jian Xie
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array signal processing ,direction-of-arrival estimation ,off-grid ,wideband noncircular signal ,Telecommunication ,TK5101-6720 ,Electronics ,TK7800-8360 - Abstract
Researchers have recently shown an increased interest in estimating the direction-of-arrival (DOA) of wideband noncircular sources, but existing studies have been restricted to subspace-based methods. An off-grid sparse recovery-based algorithm is proposed in this paper to improve the accuracy of existing algorithms in low signal-to-noise ratio situations. The covariance and pseudo covariance matrices can be jointly represented subject to block sparsity constraints by taking advantage of the joint sparsity between signal components and bias. Furthermore, the estimation problem is transformed into a single measurement vector problem utilizing the focused operation, resulting in a significant reduction in computational complexity. The proposed algorithm's error threshold and the Cramer-Rao bound for wideband noncircular DOA estimation are deduced in detail. The proposed algorithm's effectiveness and feasibility are demonstrated by simulation results.
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- 2023
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29. Extracellular Vesicles Obtained From Lung Adenocarcinoma Cells Cultured Under Intermittent Hypoxia Induce M2 Macrophage Polarization via miR-20a-5p Delivery
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Yuanling Liu MD, Minzhen Lu MSc, Feng Liu PhD, Gang Xu PhD, Congrui Feng MSc, Yuluo Chen MSc, Danyan Cai MSc, Huake Sun MSc, Yanjun Zeng MD, Jian Xie MSc, Wei Ma PhD, and Xinglin Gao PhD
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Introduction: Intermittent hypoxia (IH), an important feature of obstructive sleep apnea, enhances the function of lung cancer cell-derived extracellular vesicles (EVs) to exacerbate the immunosuppressive properties of macrophages. Herein, we investigated the effects of EVs obtained from lung adenocarcinoma cells cultured under IH on macrophage polarization. Methods: The M1-type and M2-type tumor-associated macrophages (TAMs) in tissues from lung adenocarcinoma cases with (n = 10) or without (n = 12) OSA were assessed by immunohistochemical studies. EVs obtained from A549 cells grown under normoxia (EV-NA) or IH (EV-IH) were isolated and cocultured with macrophages. MicroRNA sequencing was used to determine discrepant miRNAs in EVs, selecting miR-20a-5p for subsequent experiments. Next, reverse transcription-quantitative polymerase chain reaction, flow cytometry, luciferase reporter assay, western blotting assay, and gain- and loss-of-function assays were used to explore the mechanism by which miR-20a-5p promotes M2 macrophage polarization by targeting phosphatase and Tensin homolog gene (PTEN). Results: Stromal M2 TAMs were highly abundant in patients with lung adenocarcinoma and obstructive sleep apnea. Macrophages treated with EV-IH that highly expressed miR-20a-5p showed the M2 phenotype. Luciferase reporter assay confirmed PTEN as a target of miR-20a-5p. Transfection of miR-20a-5p mimics decreased PTEN expression, upregulated M2 polarization markers, and promoted Akt phosphorylation in macrophages, while transfection with a miR-20a-5p inhibitor had the opposite effects. Furthermore, miR-20a-5p inhibition in macrophages eliminated the PTEN downregulation, Akt phosphorylation, and upregulation of M2 polarization markers induced by EV-IH transfection. Conclusion: These findings indicate that EVs obtained from lung adenocarcinoma cells cultured under IH deliver miR-20a-5p to promote M2 macrophage polarization by targeting PTEN.
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- 2024
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30. Stabilization of P2-type cathode at 4.5 V by 'La pillar' in Na layer with a La–O orbital hybridization for long-life and high-energy-density Na-ion batteries
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Yinda Li, Zilong Wang, Yuxuan Wu, Dingan Cai, Jian Xie, Bo Xu, Aijun Zhou, Shuangyu Liu, Xiongwen Xu, Jian Tu, and Yunhao Lu
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Na-ion battery ,P2 type ,Cathode material ,La doping ,High voltage ,Technology - Abstract
P2-type layered oxide cathodes suffer from poor capacity retention and detrimental phase transitions at high voltage due to the presence of Na vacancies. During deep desodiation, irreversible lattice oxygen release increases capacity but also accelerates lattice collapse. In this work, to address the capacity limitations of the P2-type layered oxide cathode and leverage its structural stability, we develop a high-voltage P2-type layered oxide cathode, Na0.84La0.01Li0.12Ni0.22Mn0.66O2 (P2-NLLNMO). The La-doped material exhibits less volume variation (1.8%) and more stable crystal structure over a wide voltage window of 2.0–4.5 V. P2-NLLNMO yields a high capacity of 136.6 mAh g–1 and excellent cycling stability (89.2% retention after 200 cycles at 0.5 C) with a cutoff voltage 4.5 V. In addition, we reveal that La–O orbital hybridization is important for the enhanced performance when La atoms are doped in Na layers of P2-NLLNMO. This discovery provides valuable insights and guidance for the design of P2-type cathodes in high-energy-density sodium-ion batteries.
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- 2024
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31. Ferroptosis in cardiovascular disease
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Guoqing Liu, Xiaoyong Xie, Wang Liao, Siyuan Chen, Rumao Zhong, Jiahui Qin, Peichun He, and Jian Xie
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Ferroptosis ,Cardiovascular disease ,Abnormal iron metabolism ,Lipid peroxidation ,Treatment strategies ,Therapeutics. Pharmacology ,RM1-950 - Abstract
In the 21st century, cardiovascular disease (CVD) has become one of the leading causes of death worldwide. The prevention and treatment of CVD remain pressing scientific issues. Several recent studies have suggested that ferroptosis may play a key role in CVD. Most studies conducted thus far on ferroptosis and CVD have supported the link. Ferroptosis mediated by different signaling and metabolic pathways can lead to ischemic heart disease, myocarditis, heart failure, ischemia-reperfusion injury, and cardiomyopathy. Still, the specific mechanism of ferroptosis in CVD, the particular organ areas affected, and the stage of disease involved need to be further studied. Therefore, understanding the mechanisms regulating ferroptosis in CVD may improve disease management. Throughout this review, we summarized the mechanism of ferroptosis and its effect on the pathogenesis of CVD. We also predicted and discussed future research directions, aiming to provide new ideas and strategies for preventing and treating CVD.
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- 2024
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32. Age-dependent dendrobine biosynthesis in Dendrobium nobile: insights into endophytic fungal interactions
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Yongxia Zhao, Xiaolong Ji, Xiaoqi Liu, Lin Qin, Daopeng Tan, Di Wu, Chaojun Bai, Jiyong Yang, Jian Xie, and Yuqi He
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Dendrobium nobile ,endophytic fungi ,transcriptomic analysis ,dendrobine ,age-dependent accumulation ,Microbiology ,QR1-502 - Abstract
IntroductionDendrobium nobile (D. nobile), a valued Chinese herb known for its diverse pharmacological effects, owes much of its potency to the bioactive compound dendrobine. However, dendrobine content varies significantly with plant age, and the mechanisms governing this variation remain unclear. This study delves into the potential role of endophytic fungi in shaping host-microbe interactions and influencing plant metabolism.MethodsUsing RNA-seq, we examined the transcriptomes of 1-year-old, 2-year-old, and 3-year-old D. nobile samples and through a comprehensive analysis of endophytic fungal communities and host gene expression in D. nobile stems of varying ages, we aim to identify associations between specific fungal taxa and host genes.ResultsThe results revealing 192 differentially expressed host genes. These genes exhibited a gradual decrease in expression levels as the plants aged, mirroring dendrobine content changes. They were enriched in 32 biological pathways, including phagosome, fatty acid degradation, alpha-linolenic acid metabolism, and plant hormone signal transduction. Furthermore, a significant shift in the composition of the fungal community within D. nobile stems was observed along the age gradient. Olipidium, Hannaella, and Plectospherella dominated in 1-year-old plants, while Strelitziana and Trichomerium prevailed in 2-year-old plants. Conversely, 3-year-old plants exhibited additional enrichment of endophytic fungi, including the genus Rhizopus. Two gene expression modules (mediumpurple3 and darkorange) correlated significantly with dominant endophytic fungi abundance and dendrobine accumulation. Key genes involved in dendrobine synthesis were found associated with plant hormone synthesis.DiscussionThis study suggests that the interplay between different endophytic fungi and the hormone signaling system in D. nobile likely regulates dendrobine biosynthesis, with specific endophytes potentially triggering hormone signaling cascades that ultimately influence dendrobine synthesis.
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- 2023
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33. New dammarane-type triterpenoids from hydrolyzate of total Gynostemma pentaphyllum saponins with protein tyrosine phosphatase 1B inhibitory activity
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Daopeng Tan, Jianmei Wang, Xianting Wang, Lin Qin, Yimei Du, Changkuo Zhao, Peijun Liu, Qianru Zhang, Feifei Ma, Jian Xie, Di Wu, and Yuqi He
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Gynostemma pentaphyllum ,dammarane triterpenoids ,protein tyrosine phosphatase 1B ,phytochemistry ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Protein tyrosine phosphatase 1B (PTP1B) is a key factor and regulator of glucose, lipid metabolism throughout the body, and a promising target for treatment of type 2 diabetes mellitus (T2DM). Gynostemma pentaphyllum is a famous oriental traditional medicinal herbal plant and functional food, which has shown many beneficial effects on glucose and lipid metabolism. The aim of the present study is to assess the inhibitory activity of five new and four known dammarane triterpenoids isolated from the hydrolysate product of total G. pentaphyllum saponins. The bioassay data showed that all the compounds exhibited significant inhibitory activity against PTP1B. The structure-activity relationship showed that the strength of PTP1B inhibitory activity was mainly related to the electron-donating group on its side chain. Molecular docking analysis suggested that its mechanism may be due to the formation of competitive hydrogen bonding between the electron-donating moiety and the Asp48 amino acid residues on the PTP1B protein.
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- 2023
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34. Ferritin in cancer therapy: A pleiotropic tumoraffin nanocage‐based transport
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Guodong Deng, Yang Li, Ning Liang, Pingping Hu, Yan Zhang, Lili Qiao, Yingying Zhang, Jian Xie, Hui Luo, Fei Wang, Fangjie Chen, Fengjun Liu, Deguo Xu, and Jiandong Zhang
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cancer ,cancer treatment ,drug delivery ,ferritin ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Ferritin, a ubiquitously distributed iron storage protein, can specifically target tumor cells through transferrin receptor 1. Due to its rearrangeable nanocage structure, ferritin can be loaded with anticancer drugs. Combined with amino acid modifications on the outer‐ and/or inner‐spaces of the nanocage, ferritins can be further coupled with antigens, antibodies, and nucleotide sequences. Since ferritin is naturally presented in the human body, when used in vivo, ferritin exhibits good biocompatibility, and no immunogenic response occurs. These makes ferritin an ideal nanocarrier which shows broad application prospects in cancer therapy. Methods In this study, to find articles, a search was made in PubMed with the keywords ferritin, drug delivery, drug delivery, and cancer treatment. Results According to the investigation, some studies suggest that ferritin can be loaded with drugs and targeted for delivery to tumor tissue. Therefore, ferritin nanocarriers loaded with drugs can be used in chemotherapy, photodynamic therapy (PDT), photothermal therapy (PTT) and immunotherapy. Importantly, the specific targeting of ferritin nanocarriers to tumor cells increases the effectiveness of related therapies and reduces side effects. Conclusions We conclude in this paper that the superior properties of ferritin nanocarriers as an emerging drug delivery system make them a promising cancer treatment strategy. In the future, it is worth conducting clinical trials to further investigate the safety and efficacy of ferritin nanocarriers in patients.
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- 2023
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35. CDH4 inhibits ferroptosis in oral squamous cell carcinoma cells
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Jian Xie, Ting Lan, Da-Li Zheng, Lin-Can Ding, and You-Guang Lu
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CDH4 ,R-cadherin ,Ferroptosis ,Oral squamous cell carcinoma ,Dentistry ,RK1-715 - Abstract
Abstract Background The cadherin-4 gene (CDH4), a member of the cadherin family genes, encodes R-cadherin (R-cad); however, the function of this gene in different types of cancer remains controversial. The function of CDH4 in OSCC (oral squamous cell carcinoma) is unknown. Materials and methods We use the Cancer Genome Atlas (TCGA) database to find the expression of CDH4 in OSCC is more than normal tissue. Our tissue samples also confirmed that CDH4 gene was highly expressed in OSCC. The related cell function assay detected that CDH4 promotes the ability of cell proliferation, migration, self-renewal and invasion. Cell staining experiment confirmed that the change of CDH4 expression would change the cell mortality. The western blot of GPX4 (glutathione-dependent peroxidase-4), GSH (reduced glutathione) test assay and MDA(Malondialdehyde) test assay show that the expression of CDH4 may resist the sensitivity of ferropotosis in OSCC. Results CDH4 was upregulated in OSCC samples and was correlation with poor survival of patients. High expression of CDH4 effectively promotes the proliferation, mobility of OSCC cells and reduce the sensitivity of OSCC cells to ferroptosis. CDH4 is positively correlated with EMT pathway genes, negatively correlated with fatty acid metabolism pathway genes and peroxisome pathway genes, and positively correlated with ferroptosis suppressor genes in OSCC. Conclusions These results indicate that CDH4 may play a positive role in tumor progression and resistance ferroptosis and may be a potential therapeutic target for OSCC.
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- 2023
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36. Gut microbiota and its relation to inflammation in patients with bipolar depression: a cross-sectional study
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Tingting Huang, Yushan Shang, Chunxiao Dai, Qixiu Zhang, Shaohua Hu, and Jian Xie
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Bipolar disorder ,Depression ,Gut microbiota ,Gene sequencing ,Inflammation ,Psychiatry ,RC435-571 - Abstract
Abstract Background To explore the gut microbiota characteristics in depressed patients with bipolar disorder (BD) as well as the connection between the gut microbiota and inflammatory markers. Methods Totally 72 depressed BD patients and 16 healthy controls (HCs) were enrolled in the study. Blood and feces samples were taken from each subject. With the help of 16S-ribosomal RNA gene sequencing, the characteristics of the gut microbiota in each participant were examined. Correlation analysis was then utilized to assess the relationship between the gut microbiota and clinical parameters. Results We found the taxonomic composition of the gut microbiota, but not its diversity, was significantly different in BD patients compared to HCs. We found the abundance of Bacilli, Lactobacillales and genus Veillonella were higher in BD patients than in HCs, while genus Dorea was more abundant in HCs. Additionally, correlation analysis showed that the bacterial genera’ abundance in BD patients was strongly correlated with the severity of depression and inflammatory markers. Conclusions According to these results, the gut microbiota characteristics were changed in depressed BD patients, which may have been associated with the severity of depression and the inflammatory pathways.
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- 2023
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37. Study on wild medicinal plant resources and their applied ethnology in multiethnic areas of the Gansu–Ningxia–Inner Mongolia intersection zone
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Jian Xie, Chaoqun Luo, Xingwu Yang, Yan Ren, Xingsheng Zhang, Haoran Chen, Yongxia Zhao, Sha Liu, and Faming Wu
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Ethnobotany ,Wild plants ,Medicinal plants ,Moxibustion ,Traditional medicine ,Other systems of medicine ,RZ201-999 ,Botany ,QK1-989 - Abstract
Abstract Introduction This study conducted an ethnobotanical survey of wild medicinal plants in the multi-ethnic areas of Gansu–Ningxia–Inner Mongolia intersection zone. Traditional knowledge of medicinal plant use in the region was compiled to identify important medicinal plants currently used for treating relevant diseases and to determine species with potential for development. Methods Key informant interviews, semi-structured interviews, participatory rural appraisal methods, and ethnobotanical quantitative evaluation were used to investigate and study the traditional knowledge of local residents' use of wild medicinal plants in the region. The relative importance of the referenced plants was assessed, as well as the prominent species widely used in medicinal applications. Results The study found that the region has a total of 204 wild medicinal plant resources, belonging to 149 genera of 51 families. Among these resources, a total of 50 commonly used plants were identified (44 of which were herbs, some of which were multi-origin), belonging to 27 families, with the most species found in the Asteraceae family, with 11 species. These herbs are mainly used for preventing and treating colds and nourishing health, followed by treatment of fever, stomach problems, and bleeding. The most frequently used medicinal plant in the region is “Ai”, which includes Artemisia argyi Lévl. et Van. and Artemisia kanashiroi Kitam. All respondents provided information about the use of this medicinal plant to varying degrees, followed by Artemisia annua Linn., Ephedra sinica Stapf, Taraxacum mongolicum Hand.-Mazz., Sonchus arvensis Linn., Artemisia capillaris Thunb., among others. Conclusion Our investigation gained a wealth of traditional knowledge about the use of wild herbs, using wild herbs, which plays an important role in the lives of local residents. Especially, the herbs and application methods used for treating colds, bleeding, and stomach problems are worthy of further research and development.
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- 2023
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38. Effects of Returning Green Manure-Chinese Milk Vetch on the Availability and Transformation of Zinc in Purple Tidal Mud Soil under Rice Cultivation
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Zengping Yang, Zhongxiu Rao, Hailu Li, Xianjun Zeng, and Jian Xie
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Chinese milk vetch ,purple tidal mud ,zinc availability ,zinc form transformation ,rice cultivation ,Agriculture - Abstract
This study aimed to investigate the impact of different levels of Chinese milk vetch (Astragalus sinicus L.) incorporation on the availability and transformation of zinc in purple tidal mud soil under rice cultivation. A two-year pot experiment was conducted, comprising seven treatments: a control group without fertilizer, a control group with Chinese milk vetch application, a control group with chemical fertilizer application, and four treatment groups with varying levels of Chinese milk vetch application following chemical fertilizer application. Results showed that Chinese milk vetch application increased the content of available zinc (DTPA-Zn) in purple tidal mud soil. Sole application of Chinese milk vetch ultimately enhanced the transfer factor of zinc in purple tidal mud soil and reduced the distribution index. However, applying Chinese milk vetch after chemical fertilizer application ultimately decreased the transfer factor of zinc and increased the distribution index. Furthermore, sole application of Chinese milk vetch facilitated the conversion of zinc in purple tidal mud soil into available forms, while applying it after chemical fertilizer application promoted the transformation of zinc into ineffective forms, with a greater conversion observed at higher levels of Chinese milk vetch application.
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- 2024
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39. Bacteroides acidifaciens and its derived extracellular vesicles improve DSS-induced colitis
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Cihua Zheng, Yuchun Zhong, Jian Xie, Zhuoya Wang, Wenming Zhang, Yiming Pi, Wenjun Zhang, Li Liu, Jun Luo, and Wei Xu
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inflammatory bowel disease ,Bacteroides acidifaciens ,extracellular vesicles ,gut microbiota ,intestinal mucosal barrier ,Microbiology ,QR1-502 - Abstract
Introduction“Probiotic therapy” to regulate gut microbiota and intervene in intestinal diseases such as inflammatory bowel disease (IBD) has become a research hotspot. Bacteroides acidifaciens, as a new generation of probiotics, has shown beneficial effects on various diseases.MethodsIn this study, we utilized a mouse colitis model induced by dextran sodium sulfate (DSS) to investigate how B. acidifaciens positively affects IBD. We evaluated the effects ofB. acidifaciens, fecal microbiota transplantation, and bacterial extracellular vesicles (EVs) on DSS-induced colitis in mice. We monitored the phenotype of mouse colitis, detected serum inflammatory factors using ELISA, evaluated intestinal mucosal barrier function using Western blotting and tissue staining, evaluated gut microbiota using 16S rRNA sequencing, and analyzed differences in EVs protein composition derived from B. acidifaciens using proteomics to explore how B. acidifaciens has a positive impact on mouse colitis.ResultsWe confirmed that B. acidifaciens has a protective effect on colitis, including alleviating the colitis phenotype, reducing inflammatory response, and improving intestinal barrier function, accompanied by an increase in the relative abundance of B. acidifaciens and Ruminococcus callidus but a decrease in the relative abundance of B. fragilis. Further fecal bacterial transplantation or fecal filtrate transplantation confirmed the protective effect of eosinophil-regulated gut microbiota and metabolites on DSS-induced colitis. Finally, we validated that EVs derived from B. acidifaciens contain rich functional proteins that can contribute to the relief of colitis.ConclusionTherefore, B. acidifaciens and its derived EVs can alleviate DSS-induced colitis by reducing mucosal damage to colon tissue, reducing inflammatory response, promoting mucosal barrier repair, restoring gut microbiota diversity, and restoring gut microbiota balance in mice. The results of this study provide a theoretical basis for the preclinical application of the new generation of probiotics.
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- 2023
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40. Animal-and mineral-based medicines in Gansu-Ningxia-inner Mongolia region, P.R. China: a cross-cultural ethnobiological assessment
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Chaoqun Luo, Wenji Zhao, Sha Liu, Mingxia Luo, Tingting Fan, Yongxia Zhao, Yan Ren, Faming Wu, and Jian Xie
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traditional ethnic medicine ,animal and mineral-based medicine utilization ,cultural practices in medicine ,sustainable development ,traditional knowledge ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Introduction: Traditional animal- and mineral-based medicines are widely used in the Gansu-Ningxia-Inner Mongolia junction zone, a region with diverse ethnic groups and cultures. This study aims to document, conserve, and explore the potential of these medicines for further research and sustainable development of ethnic medicine.Methods: We interviewed 56 informants from different ethnic backgrounds and analyzed their responses quantitatively. Additionally, a comparative analysis with adjacent regions was conducted, providing invaluable contextual insights.Results: The study unveiled a diverse array of traditional medicines in the Gansu-Ningxia-Inner Mongolia junction zone. A total of 47 animal-based medicines were identified, ranging from insects and scorpios to distinctive animal organs. Of notable significance was Moschus, emerging as a pivotal traditional Chinese medicine resource. In parallel, 12 mineral-based medicines were cataloged, procured both locally and from “pharmacies”. Female informants, frequently local herbal practitioners, demonstrated broader knowledge of medicines. The analysis of 13 villages revealed varying perceptions of medicine importance, underscoring the wealth of traditional knowledge. Specific medicines, such as Feng-Mi and Xie-Zi, were widely used and valued in local healthcare practices for their cultural and medicinal benefits.Conclusion: This study provides a comprehensive overview of traditional animal- and mineral-based medicines in the Gansu-Ningxia-Inner Mongolia junction zone. It highlights the need for preserving and applying these practices in a sustainable manner. It also lays a solid foundation for future research on ethnic medicine, which can contribute to the holistic wellbeing of local communities.
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- 2023
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41. Advances in anti-tumor based on various anaerobic bacteria and their derivatives as drug vehicles
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Daichen Song, Xiaofan Yang, Yanfei Chen, Pingping Hu, Yingying Zhang, Yan Zhang, Ning Liang, Jian Xie, Lili Qiao, Guodong Deng, Fangjie Chen, and Jiandong Zhang
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bacteria ,bacteria-derived membrane vesicles ,drug delivery systems ,cancer therapy ,outer membranes vesicles ,Biotechnology ,TP248.13-248.65 - Abstract
Cancer therapies, such as chemotherapy and radiotherapy, are often unsatisfactory due to several limitations, including drug resistance, inability to cross biological barriers, and toxic side effects on the body. These drawbacks underscore the need for alternative treatments that can overcome these challenges and provide more effective and safer options for cancer patients. In recent years, the use of live bacteria, engineered bacteria, or bacterial derivatives to deliver antitumor drugs to specific tumor sites for controlled release has emerged as a promising therapeutic tool. This approach offers several advantages over traditional cancer therapies, including targeted drug delivery and reduced toxicity to healthy tissues. Ongoing research in this field holds great potential for further developing more efficient and personalized cancer therapies, such as E. coli, Salmonella, Listeria, and bacterial derivatives like outer membrane vesicles (OMVs), which can serve as vehicles for drugs, therapeutic proteins, or antigens. In this review, we describe the advances, challenges, and future directions of research on using live bacteria or OMVs as carriers or components derived from bacteria of delivery systems for cancer therapy.
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- 2023
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42. Integrated widely targeted metabolomics and network pharmacology revealed quality disparities between Guizhou and conventional producing areas of Codonopsis Radix
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Kaixian Zhang, Delin Zhang, Qingfang Yang, Langtao Long, Jian Xie, Yong Wang, Qiuyang Yao, Faming Wu, and Sha Liu
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Codonopsis Radix ,DNA barcoding ,widely targeted metabolomics ,network pharmacology ,quality ,Nutrition. Foods and food supply ,TX341-641 - Abstract
IntroductionWith the internationalization of traditional Chinese medicine, the demand for medicinal and edible Codonopsis Radix (CR) has increased, and its medicinal resources have attracted attention. CR is a well-known traditional Chinese medicine with a long pharmaceutical and edible history. The Guizhou province in China has abundant CR resources, but in the absence of systematic studies on species identification and chemical compositions, the capacity of the capacity of the province to CR resource has not been fully utilized.MethodologyWe used plant morphology and DNA barcoding techniques to identify Luodang (LD) and Weidang (WD) species. To investigate the differences in metabolites between LD and WD, as well as three Chinese Pharmacopeia CRs, and to predict pharmacological mechanisms of action for the dominant differential metabolites, we utilized widely targeted metabolomics and network pharmacology. The results also revealed the material basis for the excellent food properties of both LD and WD.ResultsThe plant traits and DNA barcoding molecular identification results indicated that Luodang and Weidang from Guizhou were Codonopsis tangshen and Codonopsis pilosula, respectively. Widely targeted metabolomics analysis revealed that a total of 1,116 metabolites from 14 categories, including phenolic acids, lipids, flavonoids, were found in five CRs and shared 1,054 (94.4%) metabolites. LD and WD each contained 3 and 10 dominant differential metabolites, respectively, which were primarily flavonoids and amino acids. Amino acids, phenolic acids, and organic acids play important roles in their excellent food attributes. In CR, eight dominant differential metabolites were discovered for the first time, including isoorientin-7-O-(6″-feruloyl) glucoside, N-formyl-L-methionine, and cyclo (Phe-Glu), among others. Network pharmacology analyses showed that, in LD, dominant differential metabolites were closely related to anti-tumor, cardiovascular disease improvement, nervous system protection, and metabolic disease treatment, whereas in WD, they were closely related to nervous system protection and cardiovascular disease improvement.ConclusionThe species of LD and WD were included in the Chinese Pharmacopeia, and their metabolite profiles were remarkably similar to CR from traditional producing areas. Therefore, LD and WD can be used and promoted medicinally as CR, and they have potential value for new drug development. This study enriched the database of CR compounds and provided a reference for quality control, resource development, and new drug development of CR.
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- 2023
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43. Chlorogenic Acid Ameliorates Post‐Infectious Irritable Bowel Syndrome by Regulating Extracellular Vesicles of Gut Microbes
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Cihua Zheng, Yuchun Zhong, Wenming Zhang, Zhuoya Wang, Haili Xiao, Wenjun Zhang, Jian Xie, Xiaogang Peng, Jun Luo, and Wei Xu
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PI‐IBS ,bacteroides acidifaciens ,chlorogenic acid ,extracellular vesicles ,glycine ,Science - Abstract
Abstract Post‐infectious irritable bowel syndrome (PI‐IBS) occurs after acute infectious diarrhea, and dysbiosis can be involved in its pathogenesis. Here, the role of chlorogenic acid (CGA) is investigated, a natural compound with several pharmacological properties, in alleviating PI‐IBS in rats. It is elucidated that the gut microbiota plays a key role in PI‐IBS pathogenesis and that rectal administration of CGA alleviated PI‐IBS by modulating the gut microbiota and its metabolites. CGA supplementation significantly increased fecal Bacteroides acidifaciens abundance and glycine levels. Glycine structurally altered B. acidifaciens extracellular vesicles (EVs) and enriched functional proteins in the EVs; glycine‐induced EVs alleviated PI‐IBS by reducing inflammation and hypersensitivity of the intestinal viscera and maintaining mucosal barrier function. Moreover, B. acidifaciens EVs are enriched in the brain tissue. Thus, CGA mediates the mitigation of PI‐IBS through the gut microbiota and its metabolites. This study proposes a novel mechanism of signal exchange between the gut microenvironment and the host.
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- 2023
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44. FTO-dependent m6A modification of Plpp3 in circSCMH1-regulated vascular repair and functional recovery following stroke
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Bin Li, Wen Xi, Ying Bai, Xue Liu, Yuan Zhang, Lu Li, Liang Bian, Chenchen Liu, Ying Tang, Ling Shen, Li Yang, Xiaochun Gu, Jian Xie, Zhongqiu Zhou, Yu Wang, Xiaoyu Yu, Jianhong Wang, Jie Chao, Bing Han, and Honghong Yao
- Subjects
Science - Abstract
The mechanisms behind how vascular repair is regulated after ischemic stroke are yet to be elucidated. Here, the authors describe that a circular RNA interacts with FTO to promote vascular repair following stroke in mice and primates via mediating m6 A modification.
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- 2023
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45. Ethnobotanical study of the wild edible and healthy functional plant resources of the Gelao people in northern Guizhou, China
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Jian Xie, Fusong Liu, Xiaohuan Jia, Yongxia Zhao, Xiaoqi Liu, Mingxia Luo, Yuqi He, Sha Liu, and Faming Wu
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Ethnobotany ,Gelao people ,Wild plants ,Medicinal plants ,National heritage ,Other systems of medicine ,RZ201-999 ,Botany ,QK1-989 - Abstract
Abstract Introduction The Gelao people are a unique minority in Southwest China with a unique culture for the utilization of edible plants, including a large number of medicinal plants. They believe that at least 61 species are edible and have medicinal value. Ethnobotany research can reveal the local knowledge of the Gelao people regarding the traditional use of plants and the relationship between this minority and their living environment to help retain and pass on this traditional knowledge forever. Methods Edible wild plants and their applied ethnic knowledge were investigated in three counties in northern Guizhou. Gelao residents were the main informants, and literature search, village interviews, participatory observation and quantitative ethnobotany evaluation were used. Results A total of 151 species of wild plants in 67 families are collected and eaten by Gelao residents, among which 61 species were considered to have medicinal value, accounting for 40.4% of the total, and 43 were listed in the Chinese Pharmacopoeia. There were 57 plant species with fruits as their edible parts, which are consumed as snacks, followed by 54 species whose young seedlings and leaves are the edible parts, most of which are consumed cold or stir-fried. Other edible parts included roots or rhizomes (bulbs), flowers, whole plants, seeds, fruiting bodies and stems. There were two consumption modes: raw and cooked. Raw foods were mainly consumed as snacks, which mainly comprise fruits. Cooked foods were mainly vegetables consumed cold or stir-fried. Some plants were used as seasonings, infused wines, condiments and grains. The main medicinal functions were nourishing and reducing heatiness. Nourishing plants were mainly “shen” plants and Liliaceae, while plants able to reduce heatiness were mainly Asteraceae. Others functions included anti-hangover, anticancer and insecticidal. There were 38 species of important edible wild plants (CFSI > 500) in northern Guizhou, which had a high utilization rate. Houttuynia cordata Thunb. and Mentha suaveolens Ehrh. were the most representative edible wild plants in this area. The species, edible parts, edible categories, consumption modes and medicinal functions of edible wild plants in this area are diverse, and the traditional knowledge on their uses is rich. However, the number of wild plant species eaten by the informants and their related knowledge were positively correlated with age, which indicates that the rich traditional knowledge in this area is gradually disappearing with urbanization. Conclusions The Gelao have a rich history of consuming wild plants. With the development of the social economy, the traditional knowledge passed from older generations is gradually being lost and its inheritance is facing great risks. This study collects, sorts and spreads this precious traditional knowledge, which is of great value to its protection and inheritance and fully demonstrates the value and importance of our work.
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- 2022
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46. An ethnobotanical study on the medicinal herb practices of the gelao ethnic minority in North Guizhou, China: an exploration of traditional knowledge
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Fusong Liu, Jie Peng, Yi Feng, Yuhan Ma, Yan Ren, Pei Sun, Yongxia Zhao, Sha Liu, Faming Wu, and Jian Xie
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gelao ethnic minority ,traditional medicinal herbs ,ethnobotany ,wild plants ,NCSI ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Introduction: The Gelao ethnic minority of northern Guizhou, China have long possessed extensive traditional knowledge of medicinal herbs. This ethnobotanical study aimed to document and evaluate wild plants used medicinally by the Gelao people, providing insights into their traditional medicine and knowledge systems.Methods: Field research was conducted in Gelao communities of Daozhen, Wuchuan and Zheng’an counties using interviews, surveys and participatory rural appraisal.Results: Quantitative ethnobotanical indices were utilized to assess the cultural significance of 187 herbs identified. The herbs belonged to 84 families, primarily Compositae, and were mostly roots, rhizomes and whole plants. They were used to treat digestive, respiratory and inflammatory disorders, gynecological diseases, bites and other conditions, mainly through decoctions. 25 highly significant herbs (national plant cultural significance index > 1000) were known to protect health. Some function as food and are considered safe. However, the study revealed issues including a declining number of knowledgeable elders and inadequate hygiene controls.Conclusion: Our findings demonstrate the Gelao’s extensive medicinal plant knowledge and highlight the need for further ethnobotanical research to document and preserve this culturally important tradition. The identified herbs also represent an alternative medicinal resource with potential modern applications pending further investigation of their pharmacology and sustainable use. Overall, this study provides valuable insights into Gelao ethnobotanical knowledge and the potential of indigenous medicine for modern healthcare.
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- 2023
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47. The amplitude of low-frequency fluctuation characteristics in depressed adolescents with suicide attempts: a resting-state fMRI study
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Changchun Hu, Wenhao Jiang, Jie Huang, Jian Lin, Jialing Huang, Mei Wang, Jian Xie, and Yonggui Yuan
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adolescent ,depression ,amplitude of low-frequency fluctuation ,suicide attempts ,emotion dysregulation ,Psychiatry ,RC435-571 - Abstract
BackgroundThe amplitude of low-frequency fluctuation (ALFF) is a measure of spontaneous brain activity derived from resting-state functional magnetic resonance imaging (rs-fMRI). Previous research has suggested that abnormal ALFF values may be associated with major depressive disorder (MDD) and suicide attempts in adolescents. In this study, our aim was to investigate the differences in ALFF values between adolescent MDD patients with and without a history of suicide attempts, and to explore the potential utility of ALFF as a neuroimaging biomarker for aiding in the diagnosis and prediction of suicide attempts in this population.MethodsThe study included 34 adolescent depression patients with suicide attempts (SU group), 43 depression patients without suicide attempts (NSU group), and 36 healthy controls (HC group). Depression was diagnosed using a threshold score greater than 17 on the Hamilton Depression Rating Scale (HDRS). The rs-fMRI was employed to calculate zALFF values and compare differences among the groups. Associations between zALFF values in specific brain regions and clinical variables such as emotion regulation difficulties were explored using Pearson partial correlation analysis. Receiver-Operating Characteristics (ROC) analysis assessed the ability of mean zALFF values to differentiate between SU and NSU groups.ResultsSignificant differences in zALFF values were observed in the left and right inferior temporal gyrus (l-ITG, r-ITG) and right fusiform gyrus (r-FG) among the three groups (GRF corrected). Both SU and NSU groups exhibited increased zALFF values in the inferior temporal gyrus compared to the HC group. Furthermore, the SU group showed significantly higher zALFF values in the l-ITG and r-FG compared to both the NSU group and the HC group. Partial correlation analysis revealed a negative correlation between zALFF values in the left superior and middle frontal gyrus (l-SFG, l-MFG) and the degree of emotional dysregulation in the SU group (R = −0.496, p = 0.003; R = −0.484, p = 0.005). Combining zALFF values from the l-ITG and r-FG achieved successful discrimination between depressed adolescents with and without suicide attempts (AUC = 0.855) with high sensitivity (86%) and specificity (71%).ConclusionDepressed adolescents with suicidal behavior exhibit unique neural activity patterns in the inferior temporal gyrus and fusiform gyrus. These findings highlight the potential utility of these specific brain regions as biomarkers for identifying suicide risk in depressed adolescents. Furthermore, associations between emotion dysregulation and activity in their frontal gyrus regions were observed. These findings provide preliminary yet pertinent insights into the pathophysiology of suicide in depressed adolescents.
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- 2023
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48. WNK1 promotes water homeostasis by acting as a central osmolality sensor for arginine vasopressin release
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Xin Jin, Jian Xie, Chia-Wei Yeh, Jen-Chi Chen, Chih-Jen Cheng, Cheng-Chang Lien, and Chou-Long Huang
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Endocrinology ,Nephrology ,Medicine - Abstract
Maintaining internal osmolality constancy is essential for life. Release of arginine vasopressin (AVP) in response to hyperosmolality is critical. Current hypotheses for osmolality sensors in circumventricular organs (CVOs) of the brain focus on mechanosensitive membrane proteins. The present study demonstrated that intracellular protein kinase WNK1 was involved. Focusing on vascular-organ-of-lamina-terminalis (OVLT) nuclei, we showed that WNK1 kinase was activated by water restriction. Neuron-specific conditional KO (cKO) of Wnk1 caused polyuria with decreased urine osmolality that persisted in water restriction and blunted water restriction–induced AVP release. Wnk1 cKO also blunted mannitol-induced AVP release but had no effect on osmotic thirst response. The role of WNK1 in the osmosensory neurons in CVOs was supported by neuronal pathway tracing. Hyperosmolality-induced increases in action potential firing in OVLT neurons was blunted by Wnk1 deletion or pharmacological WNK inhibitors. Knockdown of Kv3.1 channel in OVLT by shRNA reproduced the phenotypes. Thus, WNK1 in osmosensory neurons in CVOs detects extracellular hypertonicity and mediates the increase in AVP release by activating Kv3.1 and increasing action potential firing from osmosensory neurons.
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- 2023
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49. Ethnobotany of wild edible plants in multiethnic areas of the Gansu–Ningxia–Inner Mongolia junction zone
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Xiaohuan Jia, Yongxia Zhao, Yunyue Zhu, Xin Zeng, Xuehui Liang, Jian Xie, and Faming Wu
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Ethnobotany ,Wild plants ,Healthy plants ,Other systems of medicine ,RZ201-999 ,Botany ,QK1-989 - Abstract
Abstract Introduction In recent years, research on wild edible plant resources has become increasingly popular. The Hassan Nature Reserve is a multiethnic area mainly composed of people belonging to the Han, Hui, and Mongolian groups. The utilization of edible wild plant resources in this area is extremely high. However, with the advancement of urbanization and the development of modern agricultural technology, these resources have been seriously damaged, and related traditional knowledge, such as that related to national medicine, has been lost. Methods Based on a literature study, interviews with village and community organizations, participatory observation, and quantitative evaluation of ethnobotanical resources, wild edible plants in the Gansu–Ningxia–Inner Mongolia junction zone, were investigated. Results The survey results showed that there were 53 species (varieties) of wild edible plants belonging to 24 families in this area. The Compositae and Liliaceae families were the most abundant, with 8 and 7 species, respectively. The young stems and leaves were the most edible parts of the plants, as observed for 17 species, followed by fruits (including young fruits), which were considered the edible part of 16 species. Other edible parts included the roots or rhizomes (bulbs), seeds, whole plants, skins, etc. The edible plants were consumed in two forms: raw and cooked; raw plants, mainly fruit, were typically consumed as snacks. The cooked foods mainly consisted of vegetables, with tender stems and leaves as the main food source. These components were also used as seasoning, in medicinal diets, and as an emergency food source in times of famine. Important (CFSI > 500) wild edible plants used in health care in the region include Mulgedium tataricum (L.) DC., Nostoc commune Vaucher ex Bornet & Flahault, Sonchus arvensis L., Taraxacum mongolicum Hand.-Mazz., Allium schoenoprasum L., Robinia pseudoacacia L., Hemerocallis citrina Baroni, Elaeagnus angustifolia L., Medicago sativa L., Ulmus pumila L., Stachys sieboldii Miq., and Toona sinensis (Juss.) M. Roem., and these plants had high utilization values and rates locally. Conclusion In summary, the species of wild edible plants and their edible parts, categories, consumption forms and roles in health care in this area are diverse. The utilization of traditional knowledge is rich, and some wild plants have high development value.
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- 2022
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50. Aligned electrospun poly(l-lactide) nanofibers facilitate wound healing by inhibiting macrophage M1 polarization via the JAK-STAT and NF-κB pathways
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Jian Xie, Xiaowei Wu, Shang Zheng, Kaili Lin, and Jiansheng Su
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Aligned nanofibers ,Macrophage polarization ,Inflammation ,Wound healing ,JAK-STAT ,NF-κB ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract Delayed wound healing remains a challenge, and macrophages play an important role in the inflammatory process of wound healing. Morphological changes in macrophages can affect their phenotype, but little is known about the underlying mechanism. Aligned electrospun nanofibers have natural advantages in modulating cell morphology. Therefore, the current study constructed aligned electrospun nanofibers that could transform macrophages into elongated shapes. Our results demonstrated that aligned nanofibers without exogenous cytokines could downregulate the proinflammatory M1 phenotype and upregulate the prohealing M2 phenotype in an inflammatory environment. Importantly, our study revealed that aligned electrospun nanofibers could inhibit macrophage M1 polarization via the JAK-STAT and NF-κB pathways. Furthermore, the conditioned medium from macrophages cultured on aligned nanofibers could encourage fibroblast migration, proliferation and collagen secretion. In vivo, aligned nanofibers alleviated the inflammatory microenvironment, promoted angiogenesis and accelerated wound healing in mouse skin defects by modulating macrophage phenotypes. Collectively, aligned electrospun nanofibers can influence macrophage polarization via the JAK-STAT and NF-κB pathways and attenuate the local inflammatory response in skin wounds. This study provides a potential strategy to modulate macrophage polarization and promote wound healing by controlling the topology of biomaterials and offers a new perspective for the application of nanotechnology in wound healing.
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- 2022
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