33 results on '"Jayawardena N"'
Search Results
2. Characterisation of a Seneca Valley Virus Thermostable Mutant
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Jayawardena, N., primary, Bostina, M., additional, and Strauss, M., additional
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- 2022
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3. Virus–Receptor Interactions and Virus Neutralization: Insights for Oncolytic Virus Development
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Jayawardena N, Poirier JT, Burga LN, and Bostina M
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oncolytic viruses ,virus neutralization ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,virus-receptor interaction ,lcsh:RC254-282 - Abstract
Nadishka Jayawardena,1 John T Poirier,2 Laura N Burga,1 Mihnea Bostina1,3 1Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand; 2Department of Medicine and Molecular Pharmacology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA; 3Otago Micro and Nano Imaging, University of Otago, Dunedin, New ZealandCorrespondence: Laura N Burga; Mihnea Bostina Tel +64 2 244 5583Email laura.burga@otago.ac.nz; mihnea.bostina@otago.ac.nzAbstract: Oncolytic viruses (OVs) are replication competent agents that selectively target cancer cells. After penetrating the tumor cell, viruses replicate and eventually trigger cell lysis, releasing the new viral progeny, which at their turn will attack and kill neighbouring cells. The ability of OVs to self-amplify within the tumor while sparing normal cells can provide several advantages including the capacity to encode and locally produce therapeutic protein payloads, and to prime the host immune system. OVs targeting of cancer cells is mediated by host factors that are differentially expressed between normal tissue and tumors, including viral receptors and internalization factors. In this review article, we will discuss the evolution of oncolytic viruses that have reached the stage of clinical trials, their mechanisms of oncolysis, cellular receptors, strategies for targeting cancers, viral neutralization and developments to bypass virus neutralization.Keywords: oncolytic viruses, virus-receptor interaction, virus neutralization
- Published
- 2020
4. Cryo-EM structure of W6 possum enterovirus
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Wang, I., primary, Jayawardena, N., additional, Strauss, M., additional, and Bostina, M., additional
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- 2022
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5. Virus–Receptor Interactions: Structural Insights For Oncolytic Virus Development
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Jayawardena N, Burga LN, Poirier JT, and Bostina M
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oncolytic viruses ,virus entry ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,virus-receptor interaction ,lcsh:RC254-282 - Abstract
Nadishka Jayawardena,1 Laura N Burga,1 John T Poirier,2 Mihnea Bostina1,3 1Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand; 2Perlmutter Cancer Center, NYU Langone Health, New York, NY, USA; 3Otago Micro and Nano Imaging, University of Otago, Dunedin, New ZealandCorrespondence: Mihnea BostinaDepartment of Microbiology and Immunology, University of Otago, Dunedin, New ZealandTel +64 22 44 5583 Email mihnea.bostina@otago.ac.nzAbstract: Recent advancements in oncolytic virotherapy commend a special attention to developing new strategies for targeting cancer cells with oncolytic viruses (OVs). Modifications of the viral envelope or coat proteins serve as a logical mean of repurposing viruses for cancer treatment. In this review, we discuss how detailed structural knowledge of the interactions between OVs and their natural receptors provide valuable insights into tumor specificity of some viruses and re-targeting of alternate receptors for broad tumor tropism or improved tumor selectivity.Keywords: oncolytic viruses, virus–receptor interaction, virus entry
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- 2019
6. EE460 A Budget Impact Model to Evaluate the Economic Impact of Treating Walking Impairment in Chronic Stroke, A US Perspective
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Kane, S., Jayawardena, N., Bourque, M., Lavanture, J., and Roberts, H.
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- 2023
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7. Knowledge of Stroke Symptoms and Risk Factors: Comparison between a Metropolitan Hospital in Melbourne, Australia and a Base Hospital in Sri Lanka - A Pilot Study: PP-21
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Wijesundera, P., Van Raay, L., Pathirage, M., De Silva, N., Jayawardena, N., Tikiribandara, H., Thrift, A., Matkovic, Z., and Wijeratne, T.
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- 2011
8. Household Level Paddy Storage and Insect Infestation of Paddy, Maize and Mungbean in Anuradhapura District of Sri Lanka
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Kumari, J. M. P., primary, Wijayaratne, L. K. W., additional, Jayawardena, N. W. I. A., additional, and Egodawatta, W. C. P., additional
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- 2020
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9. Cryo-EM structure of Seneca Valley Virus-Anthrax Toxin Receptor 1 complex
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Jayawardena, N., primary, Burga, L., additional, Easingwood, R., additional, Takizawa, Y., additional, Wolf, M., additional, and Bostina, M., additional
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- 2018
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10. Sepsis with cerebral lupus…. or is it? A case report on Cryptococcaemia
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Jayawardena, N, primary, Sigera, S, additional, Rathnayake, B, additional, Lewkebandara, RH, additional, Rajakaruna, L, additional, and Jayasekera, P, additional
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- 2018
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11. Costus speciosus and Coccinia grandis : Traditional medicinal remedies for diabetes
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Waisundara, V.Y., primary, Watawana, M.I., additional, and Jayawardena, N., additional
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- 2015
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12. Knowledge of stroke symptoms and risk factors: Comparison between a metropolitan hospital in Melbourne, Australia and a base hospital in Sri Lanka - A pilot study.
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Van Raay L., Pathirage M., De Silva N., Jayawardena N., Tikiribandara H., Thrift A., Matkovic Z., Wijeratne T., Wijesundera P., Van Raay L., Pathirage M., De Silva N., Jayawardena N., Tikiribandara H., Thrift A., Matkovic Z., Wijeratne T., and Wijesundera P.
- Abstract
Introduction: Stroke is the second most common cause of death worldwide and a leading cause of adult disability. Prevention, early recognition and treatment are paramount in optimizing stroke care. Public knowledge about stroke is an important contributor to improving stroke care. Method(s): People without prior stroke who attended outpatient departments in Melbourne and Diyatalawa were asked to answer questionnaires on stroke symptoms and risk factors (RFs). The interviews were conducted by a trained medical student (Melbourne) and a trained Senior House Officer (Diyatalawa). Result(s): The interview was completed by 353 participants in Melbourne and 66 in Diyatalawa. The response rate was > 90% in both centres. In Melbourne 63% (224) could name 3 RFs but only 31% (109) could name 3 symptoms of stroke; 7% (25) could not identify a single RF, 19% (67) could not identify a single stroke symptom, and 12% identified chest pain as a symptom of stroke. In Diyatalawa 34% (24) could name 3 RFs and 32% (21) could name 3 symptoms; 21% (14) could not identify a single RF and 11% (7) could not identify a single stroke symptom. In the Melbourne group people with known RFs for stroke generally showed a greater awareness of stroke symptoms than those without risk factors. Conclusion(s): This study demonstrates the need to improve public awareness of stroke RFs and symptoms in Melbourne and Diyatalawa. Community based education programs serve to improve public knowledge of stroke, enhancing the recognition of stroke symptoms, therefore presentation to hospital is not delayed after stroke onset.
- Published
- 2011
13. Classification of Lectins by Pattern Recognition Using Glyconanoparticles.
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Surangi, H., Jayawardena, N., Xin Wang, and Mingdi Yan
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LECTINS , *PATTERN perception , *NANOPARTICLES , *GOLD nanoparticles , *LEGUMES , *SURFACE plasmon resonance - Abstract
Carbohydrate-functionalized gold nanoparticles were employed to differentiate plant-legume lectins using a statistical analysis method of linear discriminant analysis (LDA). Various carbohydrates were conjugated on gold nanoparticles, and the resulting glyconanoparticles were treated with lectins. Changes in the localized surface plasmon resonance of the glyconanoparticles upon lectin binding were recorded, and the data were subjected to LDA. Results showed that the glyconanoparticles successfully differentiated all lectins. [ABSTRACT FROM AUTHOR]
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- 2013
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14. Spatially resolved gene expression profiles of fibrosing interstitial lung diseases.
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Kim SJ, Cecchini MJ, Woo E, Jayawardena N, Passos DT, Dick FA, and Mura M
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- Humans, Lung metabolism, Lung pathology, Alveolitis, Extrinsic Allergic genetics, Alveolitis, Extrinsic Allergic pathology, Female, Male, Lung Diseases, Interstitial genetics, Lung Diseases, Interstitial pathology, Gene Expression Profiling methods, Idiopathic Pulmonary Fibrosis genetics, Idiopathic Pulmonary Fibrosis pathology, Transcriptome
- Abstract
Fibrosing interstitial lung diseases (ILDs) encompass a diverse range of scarring disorders that lead to progressive lung failure. Previous gene expression profiling studies focused on idiopathic pulmonary fibrosis (IPF) and bulk tissue samples. We employed digital spatial profiling to gain new insights into the spatial resolution of gene expression across distinct lung microenvironments (LMEs) in IPF, chronic hypersensitivity pneumonitis (CHP) and non-specific interstitial pneumonia (NSIP). We identified differentially expressed genes between LMEs within each condition, and across histologically similar regions between conditions. Uninvolved regions in IPF and CHP were distinct from normal controls, and displayed potential therapeutic targets. Hallmark LMEs of each condition retained distinct gene signatures, but these could not be reproduced in matched lung tissue samples. Based on these profiles and unsupervised clustering, we grouped previously unclassified ILD cases into NSIP or CHP. Overall, our work uniquely dissects gene expression profiles between LMEs within and across different types of fibrosing ILDs., (© 2024. The Author(s).)
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- 2024
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15. One-year budget impact of InTandem™: a novel neurorehabilitation system for individuals with chronic stroke walking impairment.
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Smayda KE, Lavanture J, Bourque M, Jayawardena N, Kane S, Roberts H, and Heikens B
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- Humans, Walking, Budgets, Neurological Rehabilitation methods, Neurological Rehabilitation economics, Chronic Disease, Cost-Benefit Analysis, Gait Disorders, Neurologic rehabilitation, Gait Disorders, Neurologic economics, Female, Male, Stroke economics, Middle Aged, Health Care Costs statistics & numerical data, United States, Stroke Rehabilitation methods, Stroke Rehabilitation economics
- Abstract
Aim: Chronic stroke walking impairment is associated with high healthcare resource utilization (HCRU) costs. InTandem™ is a neurorehabilitation system that autonomously delivers a rhythmic auditory stimulation (RAS)-based intervention for the at-home rehabilitation of walking impairment in adults in the chronic phase of stroke recovery. This study was conducted to estimate the budget impact of InTandem in comparison with currently available intervention strategies for improvement of gait/ambulation in individuals with chronic stroke walking impairment. Methods & materials: A budget impact analysis (BIA) for InTandem was conducted based on a 1-million-member US third-party payer perspective over a 1-year time horizon. Key inputs for the budget impact model were: costs for each intervention strategy (InTandem, physical therapy, self-directed walking and no treatment), HCRU costs for persons with chronic stroke and anticipated HCRU cost offsets due to improvements in gait/ambulatory status as measured by self-selected comfortable walking speed (based on functional ability). In addition to the reference case analysis, a sensitivity analysis was conducted. Results: Based on the reference case, introduction of InTandem was projected to result in overall cost savings of $439,954 in one year. Reduction of HCRU costs (-$2,411,778) resulting from improved walking speeds with InTandem offset an increase in intervention costs (+$1,971,824). Demonstrations of cost savings associated with InTandem were robust and were consistently evident in nearly all scenarios evaluated in the sensitivity analysis (e.g., with increased/decreased patient shares, increased HCRU cost or increased InTandem rental duration). Conclusion: The InTandem system is demonstrated to improve walking and ambulation in adults in the chronic phase of stroke recovery after a five-week intervention period. The BIA predicts that introduction of InTandem will be associated with overall cost savings to the payer.
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- 2024
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16. Pediatric Cryptococcosis.
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Gifford A, Jayawardena N, Carlesse F, Lizarazo J, McMullan B, Groll AH, and Warris A
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- Adult, Humans, Child, Prospective Studies, Seroepidemiologic Studies, Cryptococcosis drug therapy, Cryptococcosis epidemiology, Cryptococcosis diagnosis, Cryptococcus neoformans, HIV Seropositivity
- Abstract
Background: Seroprevalence studies have shown that 70% of children are exposed to Cryptococcus , the most common cause of meningitis in people living with human immunodeficiency virus (HIV), but reported pediatric disease prevalence is much lower than in adults., Methods: PubMed and Ovid Global Health databases were searched with the terms "cryptococcosis," "cryptococcal meningitis," " Cryptococcus neoformans " or " Cryptococcus gattii ." All studies reporting pediatric specific data in the English language from 1980 up until December 2022 were included., Results: One hundred sixty-eight publications were reviewed totaling 1469 children, with the majority reported from Africa (54.2%). Sixty-five percent (961) were HIV positive, 10% (147) were non-HIV immunocompromised and 19% (281) were immunocompetent. Clinical signs and symptoms were only reported for 458 children, with fever (64%), headache (55%) and vomiting (39%) being the most common. Most children (80%) suffered from meningoencephalitis. Lung involvement was rarely described in HIV-positive children (1%), but significantly more common in the non-HIV immunocompromised (36%) and immunocompetent (40%) groups ( P < 0.0001). Only 22% received the recommended antifungal combination therapy, which was significantly higher in immunocompetent children than those with HIV (39% vs. 6.8%; P < 0.0001). Overall mortality was 23%. A significant higher mortality was observed in children with HIV compared with immunocompetent children (32% vs. 16%; P < 0.001), but not compared with children with non-HIV immunosuppression (25)., Conclusions: This is the largest review of pediatric cryptococcosis with new observations on differences in clinical presentation and outcome depending on the underlying condition. The lack of granular clinical data urges prospective clinical epidemiological studies for improved insight in the epidemiology, management and outcome of cryptococcosis in children., Competing Interests: A.W. has received consultant fees from Gilead and Mundipharma and payment for educational events from Gilead and F2G. The other authors have no conflicts of interest to disclose., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
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- 2024
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17. Investigating the revised international marketing strategies during COVID-19 based on resources and capabilities of the firms: A mixed method approach.
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Behl A, Jayawardena N, Nigam A, Pereira V, Shankar A, and Jebarajakirthy C
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This paper aims to identify the revised international marketing strategies in communication during the COVID-19 pandemic by utilizing the firm's resources and capabilities. We conducted in-depth interviews and a questionnaire survey with key stakeholders of retail organizations which changed their digital marketing strategies during COVID-19. The data is collected from 587 respondents from different parts of the world through resource orchestration theory. The qualitative findings support a high degree of association among the firm's resources and capabilities, leveraging processes based on the revised international marketing strategies during the COVID-19 pandemic. We have developed a conceptual model based on these findings with six variables: leveraging process of the firm's capabilities information technology-related resources; information technology-related capabilities, dynamic capabilities, environmental uncertainty, and leveraging process of the firm's resources. However, environmental uncertainty and leveraging of the firm's resources were not influential in forming digital marketing strategies during COVID-19. This study proposes a new process for international marketing managers in business organizations to restructure the resources within their organizations by creating new capabilities and leveraging them., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 Elsevier Inc. All rights reserved.)
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- 2023
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18. Characterisation of a Seneca Valley virus thermostable mutant.
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Jayawardena N, McCarthy C, Wang I, Waqqar S, Burga LN, Strauss M, and Bostina M
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- Capsid metabolism, Capsid Proteins metabolism, Oncolytic Viruses, Picornaviridae genetics
- Abstract
Seneca Valley virus (SVV) is a newly discovered picornavirus in the Senecavirus genus. SVV-001 strain has shown promise as an oncolytic virus against tumors with neuroendocrine features. There is a need to use a structure-based approach to develop virus-like particles capable to mimicking the architecture of naturally occurring empty capsids that can be used as vaccines or as carriers for targeted cancer treatment. However, these empty capsids are inherently less stable, and tedious to purify. This warrants investigation into factors which confer the SVV capsid stability and into combining this knowledge to recombinantly express stable SVV VLPs. In this study, we isolated a thermostable mutant of SVV by thermal selection assays and we characterized a single mutation located in a capsid protein. The cryo-EM map of this mutant showed conformational shifts that facilitated the formation of additional hydrogen bonds and aromatic interactions, which could serve as capsid stabilizing factors., Competing Interests: Declaration of interests The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier Inc. All rights reserved.)
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- 2022
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19. Digital quantification of p16-positive foci in fibrotic interstitial lung disease is associated with a phenotype of idiopathic pulmonary fibrosis with reduced survival.
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Keow J, Cecchini MJ, Jayawardena N, Zompatori M, Joseph MG, and Mura M
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- Cyclin-Dependent Kinases analysis, Cyclin-Dependent Kinases genetics, Cyclin-Dependent Kinases metabolism, Fibrosis, Humans, Lung metabolism, Phenotype, Idiopathic Pulmonary Fibrosis diagnosis, Idiopathic Pulmonary Fibrosis drug therapy, Idiopathic Pulmonary Fibrosis genetics, Lung Diseases, Interstitial diagnosis, Lung Diseases, Interstitial drug therapy, Lung Diseases, Interstitial genetics
- Abstract
Background: Idiopathic pulmonary fibrosis (IPF) is associated with increased expression of cyclin-dependent kinase inhibitors such as p16 and p21, and subsequent induction of cell cycle arrest, cellular senescence, and pro-fibrotic gene expression. We sought to link p16-expression with a diagnosis of IPF or other fibrotic interstitial lung diseases (ILDs), radiographic pattern, senescent foci-specific gene expression, antifibrotic therapy response, and lung transplant (LTx)-free survival., Methods: Eighty-six cases of fibrosing ILD were identified with surgical lung biopsy. Immunohistochemistry for p16 was performed on sections with the most active fibrosis. p16-positive foci (loose collection of p16-positive fibroblasts with overlying p16-positive epithelium) were identified on digital slides and quantified. Cases were scored as p16-low (≤ 2.1 foci per 100 mm
2 ) or p16-high (> 2.1 foci per 100 mm2 ). Twenty-four areas including senescent foci, fibrotic and normal areas were characterized using in situ RNA expression analysis with digital spatial profiling (DSP) in selected cases., Results: The presence of p16-positive foci was specific for the diagnosis of IPF, where 50% of cases expressed any level of p16 and 26% were p16-high. There was no relationship between radiographic pattern and p16 expression. However, there was increased expression of cyclin-dependent kinase inhibitors, collagens and matrix remodeling genes within p16-positive foci, and cases with high p16 expression had shorter LTx-free survival. On the other hand, antifibrotic therapy was significantly protective. DSP demonstrated that fibroblastic foci exhibit transcriptional features clearly distinct from that of normal-looking and even fibrotic areas., Conclusions: We demonstrated the potential clinical applicability of a standardized quantification of p16-positive fibroblastic foci. This method identifies an IPF phenotype associated with foci-specific upregulation of senescence-associated and matrix remodeling gene expression. While these patients have reduced LTx-free survival, good response to antifibrotic therapies was observed in those who were treated., (© 2022. The Author(s).)- Published
- 2022
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20. Cryo-EM Structure of a Possum Enterovirus.
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Wang I, Gupta SK, Ems G, Jayawardena N, Strauss M, and Bostina M
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- Animals, Australia, Capsid metabolism, Capsid ultrastructure, Cryoelectron Microscopy, Enterovirus genetics, Enterovirus isolation & purification, Enterovirus metabolism, Enterovirus Infections virology, Enterovirus ultrastructure, Enterovirus Infections veterinary, Trichosurus virology
- Abstract
Enteroviruses (EVs) represent a substantial concern to global health. Here, we present the cryo-EM structure of a non-human enterovirus, EV-F4, isolated from the Australian brushtail possum to assess the structural diversity of these picornaviruses. The capsid structure, determined to ~3 Å resolution by single particle analysis, exhibits a largely smooth surface, similar to EV-F3 (formerly BEV-2). Although the cellular receptor is not known, the absence of charged residues on the outer surface of the canyon suggest a different receptor type than for EV-F3. Density for the pocket factor is clear, with the entrance to the pocket being smaller than for other enteroviruses.
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- 2022
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21. N-Linked Glycosylation on Anthrax Toxin Receptor 1 Is Essential for Seneca Valley Virus Infection.
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Jayawardena N, Miles LA, Burga LN, Rudin C, Wolf M, Poirier JT, and Bostina M
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- Glycosylation, Humans, Picornaviridae genetics, Receptors, Cell Surface metabolism, Receptors, Peptide genetics, Picornaviridae physiology, Receptors, Peptide chemistry, Receptors, Peptide metabolism, Virus Attachment, Virus Internalization
- Abstract
Seneca Valley virus (SVV) is a picornavirus with potency in selectively infecting and lysing cancerous cells. The cellular receptor for SVV mediating the selective tropism for tumors is anthrax toxin receptor 1 (ANTXR1), a type I transmembrane protein expressed in tumors. Similar to other mammalian receptors, ANTXR1 has been shown to harbor N-linked glycosylation sites in its extracellular vWA domain. However, the exact role of ANTXR1 glycosylation on SVV attachment and cellular entry was unknown. Here we show that N-linked glycosylation in the ANTXR1 vWA domain is necessary for SVV attachment and entry. In our study, tandem mass spectrometry analysis of recombinant ANTXR1-Fc revealed the presence of complex glycans at N166, N184 in the vWA domain, and N81 in the Fc domain. Symmetry-expanded cryo-EM reconstruction of SVV-ANTXR1-Fc further validated the presence of N166 and N184 in the vWA domain. Cell blocking, co-immunoprecipitation, and plaque formation assays confirmed that deglycosylation of ANTXR1 prevents SVV attachment and subsequent entry. Overall, our results identified N-glycosylation in ANTXR1 as a necessary post-translational modification for establishing stable interactions with SVV. We anticipate our findings will aid in selecting patients for future cancer therapeutics, where screening for both ANTXR1 and its glycosylation could lead to an improved outcome from SVV therapy.
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- 2021
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22. Correction: McCarthy, C.; et al . Developing Picornaviruses for Cancer Therapy. Cancers 2019, 11 , 685.
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McCarthy C, Jayawardena N, Burga LN, and Bostina M
- Abstract
The authors wish to make the following corrections to this paper [1] [...].
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- 2020
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23. Infective myositis, an uncommon presentation of melioidosis: a case report and review of the literature.
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Jayawardena N, Ralapanawa U, Kumarihamy P, Jayalath T, Abeygunawardana SP, Dissanayake N, Dissanayake P, Udupihille J, Ratnatunga N, and Dalugama C
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- Burkholderia pseudomallei isolation & purification, Humans, Male, Melioidosis complications, Melioidosis drug therapy, Middle Aged, Myositis drug therapy, Myositis etiology, Sri Lanka, Tomography, X-Ray Computed, Treatment Outcome, Anti-Bacterial Agents therapeutic use, Melioidosis diagnosis, Meropenem therapeutic use, Myositis diagnosis, Thigh pathology, Trimethoprim, Sulfamethoxazole Drug Combination therapeutic use
- Abstract
Background: Melioidosis is considered endemic in certain areas of the world. Musculoskeletal and soft tissue involvement are relatively uncommon presentations in melioidosis. We present a case of infective myositis in a patient with melioidosis in Sri Lanka, which is not considered an endemic country. Even though multiple cases of melioidosis have been reported with an increasing number in Sri Lanka, infective myositis secondary to melioidosis was not reported previously., Case Presentation: A 60-year-old Sinhalese man with diabetes presented with fever of 4 months' duration and a limp with a painful lump on the right side of the upper thigh of 2 months' duration. He had been treated in a local hospital for community-acquired pneumonia 3 weeks prior to this admission, for which he had received intravenous meropenem and teicoplanin with intensive care unit admission. He had a 0.5-cm × 0.5-cm tender lump over the right vastus lateralis muscle, and contrast-enhanced computed tomography of the area showed an ill-defined, heterogeneously enhancing, hypodense area involving the vastus lateralis, vastus intermedius, and quadratus femoris, suggestive of infective myositis but without abscess formation. Histopathology of the muscle biopsied from the vastus lateralis showed suppurative inflammation of subcutaneous fat with connective tissue necrosis and muscle infiltrated by lymphocytes. These features are suggestive of infective myositis possibly due to melioidosis. Although the result of a culture taken from the muscle biopsy was negative, the patient's antibody titer was strongly positive for melioidosis. He did not show any other areas with infected foci. He was treated with intravenous meropenem for 2 weeks and responded well. He was discharged with trimethoprim-sulfamethoxazole for 6 months as a maintenance therapy., Conclusion: Melioidosis is commonly an undiagnosed disease that has a wide variety of clinical presentations. Myositis in melioidosis is uncommon, and careful evaluation is mandatory to avoid misdiagnosis of this treatable but fatal disease. The clinician should have a high index of clinical suspicion, and further clinical and epidemiological studies are needed to determine the true burden of the disease.
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- 2019
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24. Developing Picornaviruses for Cancer Therapy.
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McCarthy C, Jayawardena N, Burga LN, and Bostina M
- Abstract
Oncolytic viruses (OVs) form a group of novel anticancer therapeutic agents which selectively infect and lyse cancer cells. Members of several viral families, including Picornaviridae , have been shown to have anticancer activity. Picornaviruses are small icosahedral non-enveloped, positive-sense, single-stranded RNA viruses infecting a wide range of hosts. They possess several advantages for development for cancer therapy: Their genomes do not integrate into host chromosomes, do not encode oncogenes, and are easily manipulated as cDNA. This review focuses on the picornaviruses investigated for anticancer potential and the mechanisms that underpin this specificity., Competing Interests: The authors declare no conflict of interest.
- Published
- 2019
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25. Structural basis for anthrax toxin receptor 1 recognition by Seneca Valley Virus.
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Jayawardena N, Burga LN, Easingwood RA, Takizawa Y, Wolf M, and Bostina M
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- Amino Acid Sequence, Antigens, Bacterial metabolism, Bacillus anthracis metabolism, Bacterial Toxins metabolism, Capsid Proteins chemistry, Capsid Proteins metabolism, Host Specificity, Humans, Microfilament Proteins, Models, Molecular, Neoplasm Proteins genetics, Oncolytic Virotherapy, Picornaviridae genetics, Protein Binding, Receptors, Cell Surface genetics, Receptors, Peptide genetics, Receptors, Peptide metabolism, Structure-Activity Relationship, Neoplasm Proteins chemistry, Neoplasm Proteins metabolism, Picornaviridae metabolism, Receptors, Cell Surface chemistry, Receptors, Cell Surface metabolism
- Abstract
Recently, the use of oncolytic viruses in cancer therapy has become a realistic therapeutic option. Seneca Valley Virus (SVV) is a newly discovered picornavirus, which has earned a significant reputation as a potent oncolytic agent. Anthrax toxin receptor 1 (ANTXR1), one of the cellular receptors for the protective antigen secreted by Bacillus anthracis , has been identified as the high-affinity cellular receptor for SVV. Here, we report the structure of the SVV-ANTXR1 complex determined by single-particle cryo-electron microscopy analysis at near-atomic resolution. This is an example of a shared receptor structure between a mammalian virus and a bacterial toxin. Our structure shows that ANTXR1 decorates the outer surface of the SVV capsid and interacts with the surface-exposed BC loop and loop II of VP1, "the puff" of VP2 and "the knob" of VP3. Comparison of the receptor-bound capsid structure with the native capsid structure reveals that receptor binding induces minor conformational changes in SVV capsid structure, suggesting the role of ANTXR1 as an attachment receptor. Furthermore, our results demonstrate that the capsid footprint on the receptor is not conserved in anthrax toxin receptor 2 (ANTXR2), thereby providing a molecular mechanism for explaining the exquisite selectivity of SVV for ANTXR1., Competing Interests: The authors declare no conflict of interest., (Copyright © 2018 the Author(s). Published by PNAS.)
- Published
- 2018
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26. Targeting inflammatory monocytes in sepsis-associated encephalopathy and long-term cognitive impairment.
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Andonegui G, Zelinski EL, Schubert CL, Knight D, Craig LA, Winston BW, Spanswick SC, Petri B, Jenne CN, Sutherland JC, Nguyen R, Jayawardena N, Kelly MM, Doig CJ, Sutherland RJ, and Kubes P
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- Adult, Aged, Animals, Antibodies, Monoclonal therapeutic use, Cognitive Dysfunction microbiology, Disease Models, Animal, Female, Humans, Inflammation microbiology, Interleukin-8 antagonists & inhibitors, Interleukin-8 immunology, Intravital Microscopy, Male, Mental Status and Dementia Tests, Mice, Microglia physiology, Middle Aged, Monocytes metabolism, Neutrophils pathology, Pneumococcal Infections complications, Receptors, CCR2 antagonists & inhibitors, Receptors, CCR2 immunology, Receptors, CCR2 metabolism, Sepsis-Associated Encephalopathy blood, Sepsis-Associated Encephalopathy microbiology, Brain pathology, Cognitive Dysfunction pathology, Cytokines blood, Inflammation blood, Monocytes pathology, Sepsis-Associated Encephalopathy pathology
- Abstract
Sepsis-associated encephalopathy manifesting as delirium is a common problem in critical care medicine. In this study, patients that had delirium due to sepsis had significant cognitive impairments at 12-18 months after hospital discharge when compared with controls and Cambridge Neuropsychological Automated Test Battery-standardized scores in spatial recognition memory, pattern recognition memory, and delayed-matching-to-sample tests but not other cognitive functions. A mouse model of S. pneumoniae pneumonia-induced sepsis, which modeled numerous aspects of the human sepsis-associated multiorgan dysfunction, including encephalopathy, also revealed similar deficits in spatial memory but not new task learning. Both humans and mice had large increases in chemokines for myeloid cell recruitment. Intravital imaging of the brains of septic mice revealed increased neutrophil and CCR2+ inflammatory monocyte recruitment (the latter being far more robust), accompanied by subtle microglial activation. Prevention of CCR2+ inflammatory monocyte recruitment, but not neutrophil recruitment, reduced microglial activation and other signs of neuroinflammation and prevented all signs of cognitive impairment after infection. Therefore, therapeutically targeting CCR2+ inflammatory monocytes at the time of sepsis may provide a novel neuroprotective clinical intervention to prevent the development of persistent cognitive impairments.
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- 2018
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27. Cryo-Electron Microscopy Structure of Seneca Valley Virus Procapsid.
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Strauss M, Jayawardena N, Sun E, Easingwood RA, Burga LN, and Bostina M
- Subjects
- Genome, Viral, Humans, Lung Neoplasms virology, Models, Molecular, Picornaviridae Infections virology, Protein Conformation, Tumor Cells, Cultured, Capsid ultrastructure, Capsid Proteins chemistry, Cryoelectron Microscopy methods, Picornaviridae ultrastructure, Virion ultrastructure, Virus Assembly
- Abstract
Seneca Valley virus (SVV), like some other members of the Picornaviridae , forms naturally occurring empty capsids, known as procapsids. Procapsids have the same antigenicity as full virions, so they present an interesting possibility for the formation of stable virus-like particles. Interestingly, although SVV is a livestock pathogen, it has also been found to preferentially infect tumor cells and is being explored for use as a therapeutic agent in the treatment of small-cell lung cancers. Here we used cryo-electron microscopy to investigate the procapsid structure and describe the transition of capsid protein VP0 to the cleaved forms of VP4 and VP2. We show that the SVV receptor binds the procapsid, as evidence of its native antigenicity. In comparing the procapsid structure to that of the full virion, we also show that a cage of RNA serves to stabilize the inside surface of the virus, thereby making it more acid stable. IMPORTANCE Viruses are extensively studied to help us understand infection and disease. One of the by-products of some virus infections are the naturally occurring empty virus capsids (containing no genome), termed procapsids, whose function remains unclear. Here we investigate the structure and formation of the procapsids of Seneca Valley virus, to better understand how they form, what causes them to form, how they behave, and how we can make use of them. One potential benefit of this work is the modification of the procapsid to develop it for targeted in vivo delivery of therapeutics or to make a stable vaccine against SVV, which could be of great interest to the agricultural industry., (Copyright © 2018 American Society for Microbiology.)
- Published
- 2018
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28. Amyloid Fibrils from Hemoglobin.
- Author
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Jayawardena N, Kaur M, Nair S, Malmstrom J, Goldstone D, Negron L, Gerrard JA, and Domigan LJ
- Subjects
- Amyloid metabolism, Animals, Cattle, Hemoglobins metabolism, Hydrogen-Ion Concentration, Peptide Hydrolases metabolism, Protein Structure, Secondary, Solubility, Solvents chemistry, Temperature, Amyloid chemistry, Hemoglobins chemistry, Protein Multimerization
- Abstract
Amyloid fibrils are a class of insoluble protein nanofibers that are formed via the self-assembly of a wide range of peptides and proteins. They are increasingly exploited for a broad range of applications in bionanotechnology, such as biosensing and drug delivery, as nanowires, hydrogels, and thin films. Amyloid fibrils have been prepared from many proteins, but there has been no definitive characterization of amyloid fibrils from hemoglobin to date. Here, nanofiber formation was carried out under denaturing conditions using solutions of apo-hemoglobin extracted from bovine waste blood. A characteristic amyloid fibril morphology was confirmed by transmission electron microscopy (TEM) and atomic force microscopy (AFM), with mean fibril dimensions of approximately 5 nm diameter and up to several microns in length. The thioflavin T assay confirmed the presence of β-sheet structures in apo-hemoglobin fibrils, and X-ray fiber diffraction showed the characteristic amyloid cross-β quaternary structure. Apo-hemoglobin nanofibers demonstrated high stability over a range of temperatures (-20 to 80 °C) and pHs (2-10), and were stable in the presence of organic solvents and trypsin, confirming their potential as nanomaterials with versatile applications. This study conclusively demonstrates the formation of amyloid fibrils from hemoglobin for the first time, and also introduces a cost-effective method for amyloid fibril manufacture using meat industry by-products.
- Published
- 2017
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- View/download PDF
29. Application of the Kombucha 'tea fungus' for the enhancement of antioxidant and starch hydrolase inhibitory properties of ten herbal teas.
- Author
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Watawana MI, Jayawardena N, Choo C, and Waisundara VY
- Abstract
Ten herbal teas (Acacia arabica, Aegle marmelos flower, A. marmelos root bark, Aerva lanata, Asteracantha longifolia, Cassia auriculata, Hemidesmus indicus, Hordeum vulgare, Phyllanthus emblica, Tinospora cordifolia) were fermented with the Kombucha 'tea fungus'. The pH values of the fermented beverages ranged from 4.0 to 6.0 by day 7, while the titratable acidity ranged from 2.5 to 5.0g/mL (P<0.05). Gallic acid had statistically significantly increased (P<0.05) in almost all the samples by day 7. The Oxygen radical absorbance capacity assay indicated 5 of the Kombucha beverages to have statistically significant increases (P<0.05) by day 7. The α-amylase inhibitory activities ranged from 52.5 to 67.2μg/mL in terms of IC50 values following fermentation, while the α-glucosidase inhibitory activities ranged from 95.2 to 196.1μg/mL. In conclusion, an enhancement of the antioxidant and starch hydrolase inhibitory potential of the herbal teas was observed by adding the tea fungus., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
30. An appraisal of eighteen commonly consumed edible plants as functional food based on their antioxidant and starch hydrolase inhibitory activities.
- Author
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Lee YH, Choo C, Watawana MI, Jayawardena N, and Waisundara VY
- Subjects
- Amaranthus, Antioxidants analysis, Ascorbic Acid analysis, Ascorbic Acid pharmacology, Asparagus Plant, Biphenyl Compounds metabolism, Carotenoids analysis, Carotenoids pharmacology, Costus, Cucurbitaceae, Diet, Enzyme Inhibitors analysis, Humans, Phenols analysis, Phenols pharmacology, Picrates metabolism, Antioxidants pharmacology, Enzyme Inhibitors pharmacology, Functional Food analysis, Plants, Edible chemistry, Starch metabolism, alpha-Amylases metabolism, alpha-Glucosidases metabolism
- Abstract
Background: Eighteen edible plants were assessed for their antioxidant potential based on oxygen radical absorbance capacity (ORAC), 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging activity, total phenolics, vitamin C content and various lipophilic antioxidants. The inhibitory activities of the plant extracts against the enzymatic activities of α-amylase and α-glucosidase were also evaluated., Results: The antioxidant and starch hydrolase activities of the plants varied widely across a single batch of analysis. The ORAC and DPPH radical scavenging EC50 values varied between 298 and 1984 Trolox equivalents g(-1) fresh weight and between 91 and 533 mg kg(-1) fresh weight, respectively. The total phenolics and vitamin C contents varied between 32 and 125 mg gallic acid equivalents g(-1) fresh weight and between 96 and 285 µg g(-1) fresh weight, respectively. All the plants contained neoxanthin, violaxanthin, and α- and β-carotene in varying amounts. Coccinia grandis, Asparagus racemosus, Costus speciosus, Amaranthus viridis and Annona muricata displayed the highest inhibitory activities against starch hydrolases. They were the most efficient against the breakdown of seven starches exposed to the two enzymes as well., Conclusions: Overall, the edible plants were observed to display a high antioxidant potential with starch hydrolase inhibitory properties, which were beneficial in their being recognized as functional food., (© 2014 Society of Chemical Industry.)
- Published
- 2015
- Full Text
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31. Evaluation of the total antioxidant capacity, polyphenol contents and starch hydrolase inhibitory activity of ten edible plants in an in vitro model of digestion.
- Author
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Jayawardena N, Watawana MI, and Waisundara VY
- Subjects
- Digestion, In Vitro Techniques, Reactive Oxygen Species analysis, Antioxidants analysis, Hydrolases chemistry, Plant Extracts chemistry, Plants, Edible chemistry, Polyphenols pharmacology, Starch metabolism
- Abstract
The total phenolics contents, total antioxidant capacity (TAC) and starch hydrolase inhibitory activity of the aqueous extracts of 10 edible plants and the stability of these parameters after the gastric and duodenal digestion in an in vitro model was investigated. The TAC was evaluated using the oxygen radical absorbance capacity (ORAC) assay, ferric reducing antioxidant power (FRAP) and 2, 2-diphenyl-1-picrylhydrazyl (DPPH•) and 2, 2-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS•+) radical scavenging assays. Characterization and quantification of five polyphenol compounds which were previously identified to be present in all the selected plants were carried out. None of the extracts showed a decrease in the total phenolics content or the ORAC and FRAP values following digestion. None of the quantified phenolic compounds had decreased during any of the digestion phases - an observation which was deemed as beneficial in terms of therapeutic properties. Overall, the parameters analyzed were relatively stable throughout the digestive process in all the extracts.
- Published
- 2015
- Full Text
- View/download PDF
32. The Antioxidant and Starch Hydrolase Inhibitory Activity of Ten Spices in an In Vitro Model of Digestion: Bioaccessibility of Anthocyanins and Carotenoids.
- Author
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Jayawardena N, Watawana MI, Jayathilaka RT, and Waisundara VY
- Abstract
The antioxidant and starch hydrolase inhibitory activities of cardamom, cloves, coriander, cumin seeds, curry leaves, fenugreek, mustard seeds, nutmeg, sweet cumin, and star anise extracts were investigated in an in vitro model of digestion mimicking the gastric and duodenal conditions. The total phenolic contents in all spice extracts had statistically significantly (P < 0.05) increased following both gastric and duodenal digestion. This was also in correlation with the antioxidant assays quantifying the water-soluble antioxidant capacity of the extracts. The lipophilic Oxygen Radical Absorbance Capacity assay did not indicate a statistically significant change in the values during any of the digestion phases. Statistically significant (P < 0.05) reductions in the anthocyanin contents were observed during the digestion phases in contrast to the carotenoid contents. With the exception of the cumin seed extract, none of the spice extracts showed statistically significant changes in the initial starch hydrolase enzyme inhibitory values prior to gastric and duodenal digestion. In conclusion, this study was able to prove that the 10 spices were a significant source of total phenolics, antioxidant, and starch hydrolase inhibitory activities.
- Published
- 2015
- Full Text
- View/download PDF
33. The Western Pacific Regional Child Survival Strategy: progress and challenges in implementation.
- Author
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Jayawardena N, Subhi R, and Duke T
- Subjects
- Asia, Southeastern epidemiology, Child Health Services standards, Child Nutrition Disorders, Child, Preschool, Delivery of Health Care, Integrated, Humans, Immunization, Infant, Infant Mortality trends, Pacific Islands epidemiology, Survival Analysis, United Nations, World Health Organization, Child Health Services organization & administration, Child Mortality trends, Goals
- Abstract
The Regional Child Survival Strategy (RCSS) was launched by the World Health Organization and United Nations Children's Fund in 2006. This initially involved the six highest mortality burden countries in the region (Cambodia, China, Laos PDR, Papua New Guinea, Philippines and Vietnam). This paper aimed to describe the experiences of countries in the region in adopting and implementing the RCSS, and to identify factors that promote and impede progress. Child mortality has fallen substantially since 1990, and the region as a whole is on track to achieve the Millennium Development Goal 4 (MDG-4) targets. Some countries have made slower progress and are struggling. There is an urgent need to support countries that have, until now, not been included in the RCSS, particularly smaller Pacific Island nations, and to provide greater support to the poorest countries if MDG-4 targets for the region are to be achieved., (© 2010 The Authors. Journal of Paediatrics and Child Health © 2010 Paediatrics and Child Health Division (Royal Australasian College of Physicians).)
- Published
- 2012
- Full Text
- View/download PDF
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