33 results on '"James W. B. Fyfe"'
Search Results
2. Bifunctional fluorescent probes for detection of amyloid aggregates and reactive oxygen species
- Author
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Lisa-Maria Needham, Judith Weber, James W. B. Fyfe, Omaru M. Kabia, Dung T. Do, Ewa Klimont, Yu Zhang, Margarida Rodrigues, Christopher M. Dobson, Sonia Ghandi, Sarah E. Bohndiek, Thomas N. Snaddon, and Steven F. Lee
- Subjects
fluorophores ,ros ,sensors ,protein aggregation ,single-molecule imaging ,thioflavin t ,Science - Abstract
Protein aggregation into amyloid deposits and oxidative stress are key features of many neurodegenerative disorders including Parkinson's and Alzheimer's disease. We report here the creation of four highly sensitive bifunctional fluorescent probes, capable of H2O2 and/or amyloid aggregate detection. These bifunctional sensors use a benzothiazole core for amyloid localization and boronic ester oxidation to specifically detect H2O2. We characterized the optical properties of these probes using both bulk fluorescence measurements and single-aggregate fluorescence imaging, and quantify changes in their fluorescence properties upon addition of amyloid aggregates of α-synuclein and pathophysiological H2O2 concentrations. Our results indicate these new probes will be useful to detect and monitor neurodegenerative disease.
- Published
- 2018
- Full Text
- View/download PDF
3. Cu(OTf) 2 ‐Mediated Cross‐Coupling of Nitriles and N‐Heterocycles with Arylboronic Acids to Generate Nitrilium and Pyridinium Products**
- Author
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Nicola L. Bell, Thomas M. McGuire, Sonia Chabbra, Alexandra M. Z. Slawin, James W. B. Fyfe, David B. Cordes, Allan J. B. Watson, Chao Xu, Julien C. Vantourout, Bela E. Bode, Jeremy Brals, The Leverhulme Trust, EPSRC, University of St Andrews. Sir James Mackenzie Institute for Early Diagnosis, University of St Andrews. School of Chemistry, University of St Andrews. EaSTCHEM, University of St Andrews. Biomedical Sciences Research Complex, and University of St Andrews. Centre of Magnetic Resonance
- Subjects
Reaction mechanism ,010402 general chemistry ,01 natural sciences ,Catalysis ,Reductive elimination ,chemistry.chemical_compound ,Transmetalation ,QD ,Nitrilium ,Boron ,010405 organic chemistry ,Aryl ,Cationic polymerization ,DAS ,General Medicine ,General Chemistry ,Arylation ,QD Chemistry ,Combinatorial chemistry ,0104 chemical sciences ,chemistry ,Covalent bond ,Cross-coupling ,Mechanism ,Pyridinium ,Copper - Abstract
Funding: Leverhulme Trust (Grant Number(s): RPG-2015-308), Leverhulme Trust (Grant Number(s): RPG-2018-362), Engineering and Physical Sciences Research Council (Grant Number(s): EP/R025754/1). Metal‐catalyzed C–N cross‐coupling generally forms C–N bonds by reductive elimination from metal complexes bearing covalent C‐ and N‐ligands. We have identified a Cu‐mediated C–N cross‐coupling that uses a dative N‐ligand in the bond forming event, which, in contrast to conventional methods, generates reactive cationic products. Mechanistic studies suggest the process operates via transmetalation of an aryl organoboron to a Cu(II) complex bearing neutral N‐ligands, such as nitriles or N‐heterocycles. Subsequent generation of a putative Cu(III) complex enables the oxidative C–N coupling to take place, delivering nitrilium intermediates and pyridinium products. The reaction is general for a range of N(sp) and N(sp2) precursors and can be applied to drug synthesis and late‐stage N‐arylation, and the limitations in the methodology are mechanistically evidenced. Publisher PDF
- Published
- 2021
4. Synthesis of 2-BMIDA indoles via heteroannulation : applications in drug scaffold and natural product synthesis
- Author
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George E. Bell, James W. B. Fyfe, Eva M. Israel, Alexandra M. Z. Slawin, Matthew Campbell, Allan J. B. Watson, University of St Andrews. School of Chemistry, University of St Andrews. EaSTCHEM, and University of St Andrews. Sir James Mackenzie Institute for Early Diagnosis
- Subjects
Biological Products ,Alkaloids ,Organic Chemistry ,DAS ,QD ,Physical and Theoretical Chemistry ,QD Chemistry ,Biochemistry - Abstract
G.E.B. thanks the EPSRC and GSK for a PhD studentship. J.W.B.F. thanks the Leverhulme Trust for postdoctoral funding (RPG-2018-362). A Pd-catalyzed heteroannulation approach for the synthesis of C2 borylated indoles is reported. The process allows access to highly functionalized 2-borylated indole scaffolds with complete control of regioselectivity. The utility of the process is demonstrated in the synthesis of borylated sulfa drugs and in the concise synthesis of the Aspidosperma alkaloid Goniomitine. Publisher PDF
- Published
- 2022
5. Enantioselective Syntheses of Strychnos and Chelidonium Alkaloids through Regio‐ and Stereocontrolled Cooperative Catalysis
- Author
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Chao Yang, Thomas N. Snaddon, James W. B. Fyfe, and Luke S Hutchings-Goetz
- Subjects
Indoles ,Alkylation ,Stereochemistry ,Berberine Alkaloids ,Strychnos ,Iridium ,010402 general chemistry ,01 natural sciences ,Catalysis ,Stereocenter ,Alkaloids ,Sirtuin 1 ,Nucleophile ,Humans ,Benzophenanthridines ,biology ,010405 organic chemistry ,Chemistry ,Thiourea ,Enantioselective synthesis ,Stereoisomerism ,Strychnine ,General Medicine ,General Chemistry ,biology.organism_classification ,Asymmetric induction ,0104 chemical sciences ,Electrophile ,Stereoselectivity ,Chelidonium ,Palladium - Abstract
We describe enantioselective syntheses of strychnos and chelidonium alkaloids. In the first case, indole acetic acid esters were established as excellent partner nucleophiles for enantioselective cooperative isothiourea/Pd catalyzed α-alkylation. This provides products containing indole-bearing stereocenters in high yield and with excellent levels of enantioinduction in a manner that is notably independent of the N-substituent. This led to concise syntheses of (-)-akuammicine and (-)-strychnine. In the second case, the poor performance of ortho-substituted cinnamyl electrophiles in the enantioselective cooperative isothiourea/Ir catalyzed α-alkylation was overcome by appropriate substituent choice, leading to enantioselective syntheses of (+)-chelidonine, (+)-norchelidonine, and (+)-chelamine.
- Published
- 2020
6. ThX – a next-generation probe for the early detection of amyloid aggregates
- Author
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Christopher A. Hunter, Kevin O'Holleran, Thomas N. Snaddon, Karin H. Müller, Christopher M. Dobson, Judith Weber, Rachel Cliffe, Steven F. Lee, Dung T. Do, Catherine K. Xu, Luke Tutton, Benjamin Keenlyside, Sarah E. Bohndiek, Lisa-Maria Needham, Juan A. Varela, James W. B. Fyfe, David Klenerman, Needham, Lisa-Maria [0000-0002-8139-5862], O'Holleran, Kevin [0000-0003-1039-2127], Bohndiek, Sarah E [0000-0003-0371-8635], Snaddon, Thomas N [0000-0003-1119-0332], Lee, Steven F [0000-0003-4492-5139], Apollo - University of Cambridge Repository, University of St Andrews. School of Biology, University of St Andrews. Centre for Biophotonics, and University of St Andrews. School of Chemistry
- Subjects
Aging ,Chemistry(all) ,Amyloid ,Early detection ,Quantum yield ,02 engineering and technology ,Neurodegenerative ,Alzheimer's Disease ,03 medical and health sciences ,chemistry.chemical_compound ,Microscopy ,Acquired Cognitive Impairment ,QD ,030304 developmental biology ,0303 health sciences ,Prevention ,Binding properties ,Neurosciences ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,DAS ,General Chemistry ,QD Chemistry ,021001 nanoscience & nanotechnology ,Fluorescence ,Brain Disorders ,3. Good health ,Chemistry ,chemistry ,Neurological ,Biophysics ,Dementia ,Protein folding ,Thioflavin ,Generic health relevance ,0210 nano-technology - Abstract
Neurodegenerative diseases such as Alzheimer's and Parkinson's are associated with protein misfolding and aggregation. Recent studies suggest that the small, rare and heterogeneous oligomeric species, formed early on in the aggregation process, may be a source of cytotoxicity. Thioflavin T (ThT) is currently the gold-standard fluorescent probe for the study of amyloid proteins and aggregation processes. However, the poor photophysical and binding properties of ThT impairs the study of oligomers. To overcome this challenge, we have designed Thioflavin X, (ThX), a next-generation fluorescent probe which displays superior properties; including a 5-fold increase in brightness and 7-fold increase in binding affinity to amyloidogenic proteins. As an extrinsic dye, this can be used to study unique structural amyloid features both in bulk and on a single-aggregate level. Furthermore, ThX can be used as a super-resolution imaging probe in single-molecule localisation microscopy. Finally, the improved optical properties (extinction coefficient, quantum yield and brightness) of ThX can be used to monitor structural differences in oligomeric species, not observed via traditional ThT imaging., Introducing ThX, a next-generation ThT derivative that allows for the early detection of amyloid aggregates at the bulk and single-aggregate levels.
- Published
- 2020
7. Boron Complexes in Organic Synthesis
- Author
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Eva M. Israel, Allan J. B. Watson, and James W. B. Fyfe
- Subjects
chemistry.chemical_compound ,Chemistry ,Inorganic chemistry ,chemistry.chemical_element ,Organic synthesis ,Boron - Published
- 2022
8. Mechanistic Development and Recent Applications of the Chan–Lam Amination
- Author
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Matthew J West, James W. B. Fyfe, Julien C. Vantourout, and Allan J. B. Watson
- Subjects
Scope (project management) ,010405 organic chemistry ,Chemistry ,Mechanism (philosophy) ,Process chemistry ,General Chemistry ,Biochemical engineering ,010402 general chemistry ,01 natural sciences ,Amination ,0104 chemical sciences - Abstract
Transition metal-mediated formation of C-N bonds is an essential synthetic methodology. The discovery of the Chan-Lam amination provided a C-N bond forming process that was mild, convenient, and inexpensive, offering an alternative to complementary methods using other transition metals (TMs). Over the past 20 years, this reaction has seen considerable development in its scope of application, uptake into industry, and understanding of its mechanism. This review provides an account of the development of the Chan-Lam amination, highlighting progress and notable examples of application since 2011. Focus is given to evolution in mechanistic understanding and selected applications of the methodology within medicinal and process chemistry.
- Published
- 2019
9. A Regio‐ and Stereodivergent Synthesis of Homoallylic Amines by a One‐Pot Cooperative‐Catalysis‐Based Allylic Alkylation/Hofmann Rearrangement Strategy
- Author
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James W. B. Fyfe, Colin M. Pearson, and Thomas N. Snaddon
- Subjects
Alkylation ,Molecular Structure ,010405 organic chemistry ,Chemistry ,Context (language use) ,Stereoisomerism ,General Chemistry ,General Medicine ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,Article ,Catalysis ,0104 chemical sciences ,Allyl Compounds ,Tsuji–Trost reaction ,Metals, Heavy ,Stereoselectivity ,Amine gas treating ,Lewis acids and bases ,Hofmann rearrangement ,Amines - Abstract
Herein, we report a modular synthetic route to linear and branched homoallylic amines that operates through a sequential one-pot Lewis base/transition-metal catalyzed allylic alkylation/Hofmann rearrangement strategy. This protocol is operationally trivial, proceeds from simple and easily prepared substrates and catalysts, and enables all aspects of regio- and stereoselectivity to be controlled through a conserved experimental protocol. Overall, the high levels of enantio-, regio-, and diastereoselectivity obtained, in concert with the ability to access orthogonally protected or free amines, render this a straightforward and effective approach for the preparation of useful enantioenriched homoallylic amines. We have also demonstrated the utility of the products in the context of pharmaceutical synthesis.
- Published
- 2019
10. A Modular Construction of Epidithiodiketopiperazines
- Author
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Colin M. Pearson, Thomas N. Snaddon, Toya D. Scaggs, and James W. B. Fyfe
- Subjects
Molecular Structure ,010405 organic chemistry ,business.industry ,Organic Chemistry ,Stereoisomerism ,Modular construction ,Modular design ,Alkylation ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Article ,Piperazines ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Nucleophile ,Physical and Theoretical Chemistry ,Bifunctional ,business - Abstract
Epidithiodiketopiperazines (ETPs) possess remarkably diverse biological activities and have attracted significant synthetic attention. The preparation of analogues is actively pursued; however, they are structurally challenging, and more direct and modular methods for their synthesis are desirable. To this end, the utility of a bifunctional triketopiperazine building block for the straightforward synthesis of ETPs is reported. A modular strategy consisting of enolate alkylation followed by site-selective nucleophile addition enables the concise synthesis of (±)-hyalodendrin and a range of analogues.
- Published
- 2019
11. Cu(OTf)
- Author
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Nicola L, Bell, Chao, Xu, James W B, Fyfe, Julien C, Vantourout, Jeremy, Brals, Sonia, Chabbra, Bela E, Bode, David B, Cordes, Alexandra M Z, Slawin, Thomas M, McGuire, and Allan J B, Watson
- Subjects
reaction mechanisms ,Cross‐Coupling ,copper ,cross-coupling ,arylation ,boron ,Research Articles ,Research Article - Abstract
Metal‐catalyzed C–N cross‐coupling generally forms C−N bonds by reductive elimination from metal complexes bearing covalent C‐ and N‐ligands. We have identified a Cu‐mediated C–N cross‐coupling that uses a dative N‐ligand in the bond‐forming event, which, in contrast to conventional methods, generates reactive cationic products. Mechanistic studies suggest the process operates via transmetalation of an aryl organoboron to a CuII complex bearing neutral N‐ligands, such as nitriles or N‐heterocycles. Subsequent generation of a putative CuIII complex enables the oxidative C–N coupling to take place, delivering nitrilium intermediates and pyridinium products. The reaction is general for a range of N(sp) and N(sp2) precursors and can be applied to drug synthesis and late‐stage N‐arylation, and the limitations in the methodology are mechanistically evidenced., Cu(OTf)2 promotes the oxidative arylation of nitriles and N‐heterocycles to generate ionic products. Mechanistic studies suggest the process operates via reductive elimination from a CuIII complex bearing neutral N‐ligands to generate nitrilium and pyridinium products. The reaction is general for a range of N(sp) and N(sp2) precursors and can be applied to drug synthesis and late‐stage N‐arylation.
- Published
- 2021
12. Cu(OTf)2-Mediated Ionizing Cross-Coupling of N(sp) and N(sp2) with Arylboronic Acids
- Author
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Thomas M. McGuire, Brals J, Chao Xu, Bela E. Bode, chabbra s, James W. B. Fyfe, Allan J. B. Watson, David B. Cordes, Alexandra M. Z. Slawin, Julien C. Vantourout, and Nicola L. Bell
- Subjects
Metal ,chemistry.chemical_compound ,Transmetalation ,Chemistry ,Covalent bond ,Aryl ,visual_art ,Cationic polymerization ,visual_art.visual_art_medium ,Pyridinium ,Nitrilium ,Medicinal chemistry ,Reductive elimination - Abstract
Metal-catalyzed C–N cross-coupling generally forms C–N bonds by reductive elimination from metal complexes bearing covalent C- and N-ligands. We have identified a Cu-mediated C–N cross-coupling that uses a dative N-ligand in the bond forming event, which, in contrast to conventional methods, generates reactive cationic products. Mechanistic studies suggest the process operates via transmetalation of an aryl organoboron to a Cu(II) complex bearing neutral N-ligands, such as nitriles or N-heterocycles. Subsequent generation of a putative Cu(III) complex enables the oxidative C–N coupling to take place, delivering nitrilium intermediates and pyridinium products. The reaction is general for a range of N(sp) and N(sp2) precursors and can be applied to drug synthesis and late-stage N-arylation, and the limitations in the methodology are mechanistically evidenced.
- Published
- 2020
13. Enantioselective α-Benzylation of Acyclic Esters Using π-Extended Electrophiles
- Author
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Kevin J. Schwarz, Chao Yang, James W. B. Fyfe, and Thomas N. Snaddon
- Subjects
inorganic chemicals ,Alkylation ,Organophosphonates ,chemistry.chemical_element ,010402 general chemistry ,Medicinal chemistry ,01 natural sciences ,Article ,Catalysis ,chemistry.chemical_compound ,Nucleophile ,Lewis Bases ,Lewis acids and bases ,Enzyme Inhibitors ,010405 organic chemistry ,Enantioselective synthesis ,Esters ,Stereoisomerism ,General Chemistry ,General Medicine ,Phosphate ,0104 chemical sciences ,chemistry ,Electrophile ,Palladium - Abstract
The first asymmetric cooperative Lewis base/palladium catalyzed benzylic alkylation of acyclic esters is reported. This reaction proceeds via stereodefined C1-ammonium enolate nucleophiles. Critical to its success was the identification of benzylic phosphate electrophiles, which were uniquely reactive. Alkylated products were obtained with very high levels of enantioselectivity, and this method has been applied toward the synthesis of the thrombin inhibitor DX-9065a.
- Published
- 2018
14. Chemoselective Suzuki–Miyaura Cross‐Coupling via Kinetic Transmetallation
- Author
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Allan J. B. Watson, Neal J. Fazakerley, and James W. B. Fyfe
- Subjects
Pinacol ,010405 organic chemistry ,General Chemistry ,General Medicine ,010402 general chemistry ,Combinatorial chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Transmetalation ,chemistry ,Nucleophile ,Electrophile ,Organic chemistry ,Boronic acid - Abstract
Chemoselective Suzuki-Miyaura cross-coupling generally requires a designed deactivation of one nucleophile towards transmetallation. Here we show that boronic acids can be chemoselectively reacted in the presence of ostensibly equivalently reactive boronic acid pinacol (BPin) esters by kinetic discrimination during transmetallation. Simultaneous electrophile control allows sequential chemoselective cross-couplings in a single operation in the absence of protecting groups.
- Published
- 2016
15. ThX – A next-generation probe for the early detection of amyloid aggregates
- Author
-
Judith Weber, Thomas N. Snaddon, Rachel Cliffe, Benjamin Keenlyside, Lisa-Maria Needham, Sarah E. Bohndiek, David Klenerman, Steven F. Lee, Christopher M. Dobson, Dung T. Do, Christopher A. Hunter, Juan A. Varela, James W. B. Fyfe, and Catherine K. Xu
- Subjects
0303 health sciences ,Amyloid ,Binding properties ,Early detection ,010402 general chemistry ,01 natural sciences ,Fluorescence ,0104 chemical sciences ,Amyloidogenic Proteins ,03 medical and health sciences ,chemistry.chemical_compound ,chemistry ,Biophysics ,Thioflavin ,Protein folding ,Cytotoxicity ,030304 developmental biology - Abstract
Neurodegenerative diseases such as Alzheimer’s and Parkinson’s are associated with protein misfolding and aggregation. Recent studies suggest that the small, rare and heterogeneous oligomeric species, formed early on in the aggregation process, may be a source of cytotoxicity. Thioflavin T (ThT) is currently the gold-standard fluorescent probe for the study of amyloid proteins and aggregation processes. However, the poor photophysical and binding properties of ThT impairs the study of oligomers. To overcome this challenge, we have designed Thioflavin X, (ThX), a next-generation fluorescent probe which displays superior properties; including a 5-fold increase in brightness and 7-fold increase in binding affinity to amyloidogenic proteins. As an extrinsic dye, this can be used to study unique structural amyloid features both in bulk and on a single-aggregate level. Furthermore, ThX can be used as a super-resolution imaging probe in single-molecule localisation microscopy. Finally, we demonstrate that ThX can be used to detect a distinct oligomeric species, not observed via traditional ThT imaging.
- Published
- 2019
16. Si-Directed regiocontrol in asymmetric Pd-catalyzed allylic alkylations using C1-ammonium enolate nucleophiles
- Author
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Thomas N. Snaddon, James W. B. Fyfe, Omaru M. Kabia, and Colin M. Pearson
- Subjects
Allylic rearrangement ,010405 organic chemistry ,Organic Chemistry ,Enantioselective synthesis ,Regioselectivity ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Article ,0104 chemical sciences ,chemistry.chemical_compound ,Tsuji–Trost reaction ,chemistry ,Nucleophile ,Drug Discovery ,Electrophile ,Lewis acids and bases ,Vinylsilane - Abstract
Cooperative catalysis enables the direct enantioselective α-allylation of linear prochiral esters using Si-substituted allyl electrophiles. The Si-substituent directs the regioselectivity of enantioselective bond formation and provides products containing synthetically versatile pentafluorophenyl ester and vinylsilane moieties. Critical to the efficacy of this process was the recognition that the ancillary ligand on palladium could be altered to prevent formation of a deleterious ether by-product, whilst retaining enantioselectivity through the Lewis base catalyst. Flexibility such as this is unique to cooperative catalysis events and provides efficient access to an array of enantioenriched products that are orthogonally functionalized and easily modified.
- Published
- 2018
17. Bifunctional fluorescent probes for detection of amyloid aggregates and reactive oxygen species
- Author
-
Steven F. Lee, Yu Zhang, Thomas N. Snaddon, Lisa-Maria Needham, Margarida Rodrigues, Ewa Klimont, Omaru M. Kabia, James W. B. Fyfe, Judith Weber, Sarah E. Bohndiek, Christopher M. Dobson, Dung T. Do, Sonia Ghandi, Needham, Lisa-Maria [0000-0002-8139-5862], Bohndiek, Sarah [0000-0003-0371-8635], Lee, Steven [0000-0003-4492-5139], and Apollo - University of Cambridge Repository
- Subjects
0301 basic medicine ,Fluorescence-lifetime imaging microscopy ,Amyloid ,single-molecule imaging ,Protein aggregation ,010402 general chemistry ,medicine.disease_cause ,sensors ,01 natural sciences ,protein aggregation ,03 medical and health sciences ,chemistry.chemical_compound ,medicine ,fluorophores ,lcsh:Science ,Bifunctional ,Multidisciplinary ,ROS ,Single Molecule Imaging ,Fluorescence ,3. Good health ,0104 chemical sciences ,030104 developmental biology ,chemistry ,Benzothiazole ,Biophysics ,Thioflavin T ,lcsh:Q ,Oxidative stress - Abstract
Protein aggregation into amyloid deposits and oxidative stress are key features of many neurodegenerative disorders including Parkinson's and Alzheimer's disease. We report here the creation of four highly sensitive bifunctional fluorescent probes, capable of H 2 O 2 and/or amyloid aggregate detection. These bifunctional sensors use a benzothiazole core for amyloid localization and boronic ester oxidation to specifically detect H 2 O 2 . We characterized the optical properties of these probes using both bulk fluorescence measurements and single-aggregate fluorescence imaging, and quantify changes in their fluorescence properties upon addition of amyloid aggregates of α-synuclein and pathophysiological H 2 O 2 concentrations. Our results indicate these new probes will be useful to detect and monitor neurodegenerative disease.
- Published
- 2018
18. Tandem Chemoselective Suzuki-Miyaura Cross-Coupling Enabled by Nucleophile Speciation Control
- Author
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John J. Molloy, Allan J. B. Watson, Ciaran P. Seath, and James W. B. Fyfe
- Subjects
Tandem ,chemistry.chemical_element ,General Medicine ,Oxidative addition ,Transmetalation ,chemistry.chemical_compound ,chemistry ,Nucleophile ,Genetic algorithm ,Organic chemistry ,QD ,Chemoselectivity ,Boronic acid ,Palladium - Abstract
Control of boronic acid speciation is presented as a strategy to achieve nucleophile chemoselectivity in the Suzuki-Miyaura reaction. Combined with simultaneous control of oxidative addition and transmetallation, this enables chemoselective formation of two C-C bonds in a single operation, providing a method for the rapid preparation of highly functionalized carbogenic frameworks.
- Published
- 2015
19. Strategies towards Chemoselective Suzuki–Miyaura Cross-Coupling
- Author
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Allan J. B. Watson and James W. B. Fyfe
- Subjects
Transmetalation ,Chemistry ,Organic Chemistry ,Organic chemistry ,QD ,Chemoselectivity ,Oxidative addition - Abstract
Chemoselective Suzuki-Miyaura cross-coupling has emerged as a powerful method for the rapid preparation of sp2-and sp3-hybridized carbon frameworks based on control of the oxidative addition or transmetallation events. The field of chemoselective transmetallation has recently seen considerable development with several different strategies emerging including protected boronic acids, neighboring group activation, and chemoselective speciation. Herein, these state-of-the-art approaches towards chemoselective Suzuki-Miyaura cross-coupling are highlighted.
- Published
- 2015
20. A one-pot tandem chemoselective allylation/cross-coupling via temperature control of a multi-nucleophile/electrophile system
- Author
-
Ciaran P. Seath, Allan J. B. Watson, James W. B. Fyfe, Chao Xu, and Steven H. Bennett
- Subjects
chemistry.chemical_classification ,Temperature control ,Tandem ,010405 organic chemistry ,Aryl ,Metals and Alloys ,food and beverages ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Aldehyde ,Catalysis ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,Nucleophile ,chemistry ,Cascade reaction ,Electrophile ,Materials Chemistry ,Ceramics and Composites ,Organic chemistry ,Reactivity (chemistry) ,QD - Abstract
A chemoselective tandem reaction of a multi-reactive, two electrophile + two nucleophile, system is reported. An allylation/cross-coupling process of a haloaryl aldehyde, an aryl BPin, and an allyl BPin can be controlled using a temperature gradient to overcome natural reactivity profiles and allow two sequential chemoselective C–C bond formations without intervention. This process offers efficient access to an array of functionalised products including pharmaceutical and natural product scaffolds.
- Published
- 2017
21. Recent developments in organoboron chemistry - old dogs, new tricks
- Author
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Allan J. B. Watson and James W. B. Fyfe
- Subjects
010405 organic chemistry ,General Chemical Engineering ,Biochemistry (medical) ,Nanotechnology ,General Chemistry ,Organoboron chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Materials Chemistry ,Environmental Chemistry ,Organic chemistry ,Organic synthesis ,QD - Abstract
Organoboron reagents have been synonymous with organic chemistry for over half a century and continue to see widespread application today; for example, classic reactions such as hydroboration and Suzuki-Miyaura cross-coupling are regularly practiced throughout the chemical community. In particular, applications of organoboron compounds have underpinned pharmaceutical and agrochemical development on both discovery and process scales for decades. Although it is noteworthy that these seminal reactions have stood the test of time, continually increasing pressure to improve efficiency in chemical synthesis demands innovation. Over the past few years, through an explosion in the number of new methods for the installation and manipulation of organoboron functional groups, as well as the understanding of their mechanistic operation, organoboron chemistry has risen to this challenge.
- Published
- 2017
22. Synthesis of oxindoles and benozfuranones via oxidation of 2-heterocyclic BMIDAs
- Author
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James W. B. Fyfe, John J. Molloy, Allan J. B. Watson, and Ciaran P. Seath
- Subjects
010405 organic chemistry ,Chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Hydrolysis ,Organic chemistry ,Oxindole ,QD ,Pharmacophore ,Boronic acid - Abstract
The synthesis of functionalized oxindoles and benzofuranones via oxidation of 2-BMIDA indoles and benzofurans, respectively, is described. Interconversion of boron species (BMIDAaBF3K) was necessary to enable oxidation and overcome boronic acid stability issues associated with a difficult BMIDA hydrolysis. Overall, a robust process was developed that allowed access to a small library of oxindole and benzofuranone products and facilitated the step-efficient synthesis of biologically-active compounds containing the oxindole pharmacophore.
- Published
- 2016
23. Modular Construction of Fluoroarenes from a New Difluorinated Building Block by Cross-Coupling/Electrocyclisation/Dehydrofluorination Reactions
- Author
-
Alan R. Kennedy, Joanna M. Redmond, Peter G. Wilson, David Orr, Jonathan M. Percy, James W. B. Fyfe, Sergej Maciuk, Helena S. Emerson, and Lucie Rathouská
- Subjects
Coupling ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,chemistry.chemical_element ,General Chemistry ,Modular construction ,010402 general chemistry ,Block (periodic table) ,01 natural sciences ,Combinatorial chemistry ,Catalysis ,Coupling reaction ,0104 chemical sciences ,chemistry.chemical_compound ,Organotrifluoroborate ,Fluorine ,Organic chemistry ,Reactivity (chemistry) ,QD ,Palladium - Abstract
Palladium-catalysed coupling reactions based on a novel and easy-to-synthesise difluorinated organotrifluoroborate were used to assemble precursors to 6π-electrocyclisations of three different types. Electrocyclisations took place at temperatures between 90 and 240 oC, depending on the central component of the π-system; non-aromatic trienes were most reactive, but even systems which required the temporary dearomatisation of two arenyl sub-units underwent electrocyclisation, albeit at elevated temperatures. Photochemical conditions were effective for these more demanding reactions. The package of methods delivered a structurally-diverse set of fluorinated arenes, spanning a 20 kcal mol-1 range of reactivity, by a flexible route.
- Published
- 2016
24. ChemInform Abstract: Tandem Chemoselective Suzuki-Miyaura Cross-Coupling Enabled by Nucleophile Speciation Control
- Author
-
Allan J. B. Watson, James W. B. Fyfe, John J. Molloy, and Ciaran P. Seath
- Subjects
Nucleophile ,Tandem ,Chemistry ,hemic and lymphatic diseases ,Genetic algorithm ,chemical and pharmacologic phenomena ,hemic and immune systems ,General Medicine ,Combinatorial chemistry ,Bromodomain - Abstract
The reaction is applied in the synthesis of key intermediate (VII) for BET bromodomain inhibitor (VIII).
- Published
- 2016
25. Correction to ‘Bifunctional fluorescent probes for detection of amyloid aggregates and reactive oxygen species’
- Author
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Thomas N. Snaddon, Sonia Gandhi, Ewa Klimont, James W. B. Fyfe, Steven F. Lee, Lisa-Maria Needham, Margarida Rodrigues, Yu Zhang, Sarah E. Bohndiek, Christopher M. Dobson, Judith Weber, Omaru M. Kabia, Dung T. Do, Lee, Steven F [0000-0003-4492-5139], and Apollo - University of Cambridge Repository
- Subjects
single-molecule imaging ,Amyloid ,Stereochemistry ,sensors ,3101 Biochemistry and Cell Biology ,protein aggregation ,chemistry.chemical_compound ,fluorophores ,lcsh:Science ,Bifunctional ,chemistry.chemical_classification ,Reactive oxygen species ,Multidisciplinary ,Chemistry ,Correction ,ROS ,Fluorescence ,Thioflavin T ,lcsh:Q ,Research Article ,31 Biological Sciences - Abstract
Protein aggregation into amyloid deposits and oxidative stress are key features of many neurodegenerative disorders including Parkinson's and Alzheimer's disease. We report here the creation of four highly sensitive bifunctional fluorescent probes, capable of H2O2 and/or amyloid aggregate detection. These bifunctional sensors use a benzothiazole core for amyloid localization and boronic ester oxidation to specifically detect H2O2. We characterized the optical properties of these probes using both bulk fluorescence measurements and single-aggregate fluorescence imaging, and quantify changes in their fluorescence properties upon addition of amyloid aggregates of α-synuclein and pathophysiological H2O2 concentrations. Our results indicate these new probes will be useful to detect and monitor neurodegenerative disease.
- Published
- 2018
26. ChemInform Abstract: Speciation Control During Suzuki-Miyaura Cross-Coupling of Haloaryl and Haloalkenyl MIDA Boronic Esters
- Author
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Ciaran P. Seath, Joanna M. Redmond, James W. B. Fyfe, Anderson Niall Andrew, Elena Valverde, Allan J. B. Watson, and Alan R. Kennedy
- Subjects
inorganic chemicals ,chemistry.chemical_compound ,Speciation ,chemistry ,Pinacol ,media_common.quotation_subject ,General Medicine ,Solubility ,Combinatorial chemistry ,Boronic acid ,Adduct ,media_common - Abstract
Boronic acid solution speciation can be controlled during the Suzuki-Miyaura cross-coupling of haloaryl N-methyliminodiacetic acid (MIDA) boronic esters to enable the formal homologation of boronic acid derivatives. The reaction is contingent upon control of the basic biphase and is thermodynamically driven: temperature control provides highly chemoselective access to either BMIDA adducts at room temperature or boronic acid pinacol ester (BPin) products at elevated temperature. Control experiments and solubility analyses have provided some insight into the mechanistic operation of the formal homologation process.
- Published
- 2015
27. ChemInform Abstract: Strategies Towards Chemoselective Suzuki-Miyaura Cross-Coupling
- Author
-
Allan J. B. Watson and James W. B. Fyfe
- Subjects
Transmetalation ,Chemistry ,General Medicine ,Oxidative addition ,Combinatorial chemistry - Abstract
Chemoselective Suzuki-Miyaura cross-coupling has emerged as a powerful method for the rapid preparation of sp2-and sp3-hybridized carbon frameworks based on control of the oxidative addition or transmetallation events. The field of chemoselective transmetallation has recently seen considerable development with several different strategies emerging including protected boronic acids, neighboring group activation, and chemoselective speciation. Herein, these state-of-the-art approaches towards chemoselective Suzuki-Miyaura cross-coupling are highlighted.
- Published
- 2015
28. Tandem Chemoselective Suzuki-Miyaura Cross-Coupling Enabled by Nucleophile Speciation Control
- Author
-
Ciaran P. Seath, James W. B. Fyfe, John J. Molloy, and Allan J. B. Watson
- Subjects
Molecular Structure ,Benzene Derivatives ,Organometallic Compounds ,General Chemistry ,Boronic Acids ,Catalysis - Abstract
Control of boronic acid speciation is presented as a strategy to achieve nucleophile chemoselectivity in the Suzuki-Miyaura reaction. Combined with simultaneous control of oxidative addition and transmetalation, this enables chemoselective formation of two C-C bonds in a single operation, providing a method for the rapid preparation of highly functionalized carbogenic frameworks.
- Published
- 2015
29. ChemInform Abstract: Chemoselective Boronic Ester Synthesis by Controlled Speciation
- Author
-
Allan J. B. Watson, James W. B. Fyfe, and Ciaran P. Seath
- Subjects
inorganic chemicals ,chemistry.chemical_compound ,chemistry ,Pinacol ,fungi ,Genetic algorithm ,food and beverages ,General Medicine ,Combinatorial chemistry ,Boronic acid - Abstract
The solution speciation of boronic acids can be chemoselectively controlled to enable the formal homologation of boronic acid pinacol esters.
- Published
- 2015
30. Speciation control during Suzuki-Miyaura cross-coupling of haloaryl and haloalkenyl MIDA boronic esters
- Author
-
Alan R. Kennedy, Ciaran P. Seath, Elena Valverde, Joanna M. Redmond, Allan J. B. Watson, James W. B. Fyfe, and Anderson Niall Andrew
- Subjects
inorganic chemicals ,Molecular Structure ,Chemistry ,Pinacol ,media_common.quotation_subject ,Organic Chemistry ,chemistry.chemical_element ,Esters ,General Chemistry ,Boronic Acids ,Catalysis ,Adduct ,Speciation ,chemistry.chemical_compound ,Suzuki reaction ,Organic chemistry ,QD ,Chemoselectivity ,Solubility ,Boronic acid ,media_common ,Palladium - Abstract
Boronic acid solution speciation can be controlled during the Suzuki-Miyaura cross-coupling of haloaryl N-methyliminodiacetic acid (MIDA) boronic esters to enable the formal homologation of boronic acid derivatives. The reaction is contingent upon control of the basic biphase and is thermodynamically driven: temperature control provides highly chemoselective access to either BMIDA adducts at room temperature or boronic acid pinacol ester (BPin) products at elevated temperature. Control experiments and solubility analyses have provided some insight into the mechanistic operation of the formal homologation process.
- Published
- 2015
31. A modular synthesis of functionalised phenols enabled by controlled boron speciation
- Author
-
Robert P. Law, Allan J. B. Watson, Ciaran P. Seath, John J. Molloy, David Jonathan Hirst, and James W. B. Fyfe
- Subjects
inorganic chemicals ,Magnetic Resonance Spectroscopy ,chemistry.chemical_element ,Stereoisomerism ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,Phenols ,Spectroscopy, Fourier Transform Infrared ,Organic chemistry ,Phenol ,Molecule ,QD ,Physical and Theoretical Chemistry ,Boron ,Molecular Structure ,Organic Chemistry ,Nuclear magnetic resonance spectroscopy ,Hydrogen-Ion Concentration ,Oxidants ,Oxygen ,chemistry ,Drug Design ,Solvents ,Boronic acid - Abstract
A modular synthesis of functionalised biaryl phenols from two boronic acid derivatives has been developed via one-pot Suzuki-Miyaura cross-coupling, chemoselective control of boron solution speciation to generate a reactive boronic ester in situ, and oxidation. The utility of this method has been further demonstrated by application in the synthesis of drug molecules and components of organic electronics, as well as within iterative cross-coupling.
- Published
- 2015
32. When two reactions become one
- Author
-
Allan J. B. Watson and James W. B. Fyfe
- Subjects
Multidisciplinary ,010405 organic chemistry ,Chemistry ,Stereochemistry ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,Catalysis ,chemistry.chemical_compound ,Transmetalation ,Metallate ,Nucleophile ,Reagent ,Redistribution (chemistry) ,Organic synthesis ,Boron - Abstract
Organoboron compounds are among the most widely used reagents in organic synthesis and underpin many of the most frequently practiced and important reactions in synthetic organic chemistry ( 1 ). These reactions are based on specific mechanistic events that are distinctive to the reaction class. Catalytic processes are usually driven by transmetallation to transition metal complexes (passing a ligand from boron to the metal), whereas stoichiometric processes are based on metallate rearrangement mechanisms—ligands undergoing redistribution around a boron center—initiated by an incoming nucleophile. On page 70 of this issue, Zhang et al. ( 2 ) report an alternative transmetallation process that harmoniously merges these usually independent mechanisms, and they demonstrate its application within a multicomponent catalytic reaction that generates specific chiral products.
- Published
- 2016
33. Chemoselective boronic ester synthesis via controlled speciation
- Author
-
Allan J. B. Watson, Ciaran P. Seath, James W. B. Fyfe, and University of St Andrews. School of Chemistry
- Subjects
Boron Compounds ,inorganic chemicals ,chemistry.chemical_element ,Catalysis ,oligomerization ,Polymerization ,Chemoselectivity ,chemistry.chemical_compound ,Suzuki reaction ,cross-coupling ,Organic chemistry ,Oligomerization ,QD ,Boron ,Boronic ester ,Pinacol ,Aryl ,Esters ,General Medicine ,General Chemistry ,palladium ,QD Chemistry ,Communications ,QD450 ,chemistry ,chemoselectivity ,Cross-coupling ,boron ,Boronic acid ,Boronic acid solution speciation ,Palladium - Abstract
Control of boronic acid solution speciation is presented as a new strategy for the chemoselective synthesis of boronic esters. Manipulation of the solution equilibria within a cross-coupling milieu enables the formal homologation of aryl and alkenyl boronic acid pinacol esters. The generation of a new, reactive boronic ester in the presence of an active Pd catalyst also facilitates streamlined iterative catalytic C—C bond formation and provides a method for the controlled oligomerization of sp2-hybridized boronic esters. Publisher PDF
- Published
- 2014
Catalog
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