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3. Additional file 2: Figure S1. of Genome-wide DNA methylation profile identified a unique set of differentially methylated immune genes in oral squamous cell carcinoma patients in India

Author

Baidehi Basu, Joyeeta Chakraborty, Chandra, Aditi, Katarkar, Atul, Jadav Baldevbhai, Debjit Dhar Chowdhury, Ray, Jay, Keya Chaudhuri, and Raghunath Chatterjee

Abstract

Histopathogical images of mis-clustered samples. Figure S2. Genomic distribution of DMPs. Figure S3. Hierarchical clustering of average methylation. Figure S4. Validation of HumanMethylation450K bead chip data. Figure S5. Expression profile of genes with hypermethylated promoters. Figure S6. Expression profile of genes with hypomethylated promoters. Figure S7. Comparison of methylation pattern in adjacent normal, OSCC, and different stages of TCGA sample. Figure S8. Comparison of common hypomethylated probes. Figure S9. Comparison of unique hypomethylated probes. Figure S10. Gene ontology analysis of DMPs. Figure S11. Clinical significance of immune genes associated with uniquely hypomethylated probes. Figure S12. Clinical significance of non-immune genes associated with uniquely hypomethylated probes. (PDF 2377 kb)

Published
2017
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