1,435 results on '"J. Fraser Stoddart"'
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2. Automating Glycan Assembly in Solution
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Yong Wu, Yunyan Qiu, Yuanning Feng, and J. Fraser Stoddart
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Chemistry ,QD1-999 - Published
- 2022
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3. A contorted nanographene shelter
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Huang Wu, Yu Wang, Bo Song, Hui-Juan Wang, Jiawang Zhou, Yixun Sun, Leighton O. Jones, Wenqi Liu, Long Zhang, Xuan Zhang, Kang Cai, Xiao-Yang Chen, Charlotte L. Stern, Junfa Wei, Omar K. Farha, Jessica M. Anna, George C. Schatz, Yu Liu, and J. Fraser Stoddart
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Science - Abstract
Encapsulating large and contorted nanographenes inside artificial receptors remain challenging. This work reports the synthesis, characterization and binding properties of a trigonal prismatic cage compound that can serve as a receptor for contorted nanographene derivatives.
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- 2021
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4. Two-photon excited deep-red and near-infrared emissive organic co-crystals
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Yu Wang, Huang Wu, Penghao Li, Su Chen, Leighton O. Jones, Martín A. Mosquera, Long Zhang, Kang Cai, Hongliang Chen, Xiao-Yang Chen, Charlotte L. Stern, Michael R. Wasielewski, Mark A. Ratner, George C. Schatz, and J. Fraser Stoddart
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Science - Abstract
Two-photon excited near-infrared fluorescence materials have garnered considerable attention because of their superior optical properties compared with other optical materials. Here, the authors use a convenient and efficient supramolecular approach to synthesize a two-photon excited near-infrared emissive co-crystalline material.
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- 2020
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5. Conductive 2D metal-organic framework for high-performance cathodes in aqueous rechargeable zinc batteries
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Kwan Woo Nam, Sarah S. Park, Roberto dos Reis, Vinayak P. Dravid, Heejin Kim, Chad A. Mirkin, and J. Fraser Stoddart
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Science - Abstract
Aqueous zinc batteries are promising candidates for large scale energy storage systems but development of the cathode material remains a challenge. Here, the authors show a conductive 2D metal-organic framework involving intercalation pseudocapacitance mechanism for enhanced rate capability.
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- 2019
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6. Molecular Russian dolls
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Kang Cai, Mark C. Lipke, Zhichang Liu, Jordan Nelson, Tao Cheng, Yi Shi, Chuyang Cheng, Dengke Shen, Ji-Min Han, Suneal Vemuri, Yuanning Feng, Charlotte L. Stern, William A. Goddard, Michael R. Wasielewski, and J. Fraser Stoddart
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Science - Abstract
Hierarchical non-intertwined ring-in-ring complexes are intriguing but challenging supramolecular targets. Here, the authors describe a box-in-box assembly based on radical-pairing interactions between two rigid diradical dicationic cyclophanes; the inner box can further accommodate guests to form Russian doll-like assemblies.
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- 2018
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7. Shuttling Rates, Electronic States, and Hysteresis in a Ring-in-Ring Rotaxane
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Mark C. Lipke, Yilei Wu, Indranil Roy, Yuping Wang, Michael R. Wasielewski, and J. Fraser Stoddart
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Chemistry ,QD1-999 - Published
- 2018
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8. Introducing Stable Radicals into Molecular Machines
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Yuping Wang, Marco Frasconi, and J. Fraser Stoddart
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Chemistry ,QD1-999 - Published
- 2017
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9. Flexible ferroelectric organic crystals
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Magdalena Owczarek, Karl A. Hujsak, Daniel P. Ferris, Aleksandrs Prokofjevs, Irena Majerz, Przemysław Szklarz, Huacheng Zhang, Amy A. Sarjeant, Charlotte L. Stern, Ryszard Jakubas, Seungbum Hong, Vinayak P. Dravid, and J. Fraser Stoddart
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Science - Abstract
Mechanical flexibility gives organic ferroelectric materials a potential advantage over their inorganic counterparts, yet it is challenging to produce them. Owczareket al. report flexible crystals based on trisubstituted haloimidazoles that show both ferroelectric and piezoelectric properties.
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- 2016
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10. Oligorotaxane Radicals under Orders
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Yuping Wang, Marco Frasconi, Wei-Guang Liu, Junling Sun, Yilei Wu, Majed S. Nassar, Youssry Y. Botros, Michael R. Wasielewski, and J. Fraser Stoddart
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Chemistry ,QD1-999 - Published
- 2016
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11. Second-Sphere Coordination Revisited
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Zhichang Liu, Severin T. Schneebeli, and J. Fraser Stoddart
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Crystallization ,Cyclodextrins ,Gold extraction ,Molecular recognition ,Square-planar gold anions ,Chemistry ,QD1-999 - Abstract
Since the concept of second-sphere coordination of transition metal complexes was introduced by Alfred Werner in 1913, the investigation of the phenomenon has emerged as a major thrust area — a significant part of which is based on the use of transition metal complexes as first coordination spheres as well as macrocycles as second-sphere ligands in promoting the assembly and dictating the main structural features of the second-sphere adducts. In this review, we first of all summarize the work carried out in our laboratory on the second-sphere coordination chemistry of transition metal complexes in the past three decades. Significant advances of relevance to the second-sphere coordination chemistry of square-planar gold complex anions with cyclodextrins are presented as the second part of this review.
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- 2014
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12. MultiCon: A Semi-Supervised Approach for Predicting Drug Function from Chemical Structure Analysis.
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Pracheta Sahoo, Indranil Roy, Zhuoyi Wang, Feng Mi, Lin Yu, Pradeep Balasubramani, Latifur Khan, and J. Fraser Stoddart
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- 2020
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13. Triplet–Triplet Annihilation Upconversion in a Porphyrinic Molecular Container
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Hongliang Chen, Indranil Roy, Michele S. Myong, James S. W. Seale, Kang Cai, Yang Jiao, Wenqi Liu, Bo Song, Long Zhang, Xingang Zhao, Yuanning Feng, Fangjun Liu, Ryan M. Young, Michael R. Wasielewski, and J. Fraser Stoddart
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Published
- 2023
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14. Divinylanthracene-Containing Tetracationic Organic Cyclophane with Near-Infrared Photoluminescence
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Arthur H. G. David, Amine Garci, Seifallah Abid, Xuesong Li, Ryan M. Young, James S. W. Seale, Jessica E. Hornick, Chandra S. Azad, Yang Jiao, Indranil Roy, Isil Akpinar, Tanay Kesharwani, Charlotte L. Stern, Michael R. Wasielewski, and J. Fraser Stoddart
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Published
- 2023
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15. Porous Organic Cages
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Xinchun Yang, Zakir Ullah, J. Fraser Stoddart, and Cafer T. Yavuz
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General Chemistry - Published
- 2023
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16. Color-Tunable Upconversion-Emission Switch Based on Cocrystal-to-Cocrystal Transformation
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Yu Wang, Huang Wu, Leighton O. Jones, Martín A. Mosquera, Charlotte L. Stern, George C. Schatz, and J. Fraser Stoddart
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Published
- 2023
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17. Making organic nanotubes with precision
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Si-Dan Guo, J. Fraser Stoddart, and Kang Cai
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General Chemical Engineering ,Biochemistry (medical) ,Materials Chemistry ,Environmental Chemistry ,General Chemistry ,Biochemistry - Published
- 2023
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18. Mechanical Bond-Assisted Full-Spectrum Investigation of Radical Interactions
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Yang Jiao, Haochuan Mao, Yunyan Qiu, Guangcheng Wu, Hongliang Chen, Long Zhang, Han Han, Xuesong Li, Xingang Zhao, Chun Tang, Xiao-Yang Chen, Yuanning Feng, Charlotte L. Stern, Michael R. Wasielewski, and J. Fraser Stoddart
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Abstract
Molecular recognition, based on noncovalent bonding interactions, plays a central role in directing supramolecular phenomena in both chemical and biological environments. The identification and investigation of weakly associated recognition motifs, however, remains a major challenge, especially when the motifs are interlinked with and obscured by other robust binding modes in complicated systems. For example, although the host-guest recognition between the radical cations of both cyclobis(paraquat
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- 2022
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19. Reactions in single-molecule junctions
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Hongliang Chen, Chuancheng Jia, Xin Zhu, Chen Yang, Xuefeng Guo, and J. Fraser Stoddart
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Biomaterials ,Materials Chemistry ,Surfaces, Coatings and Films ,Energy (miscellaneous) ,Electronic, Optical and Magnetic Materials - Published
- 2022
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20. Alkoxy-Substituted Quadrupolar Fluorescent Dyes
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Yuanning Feng, Partha Jyoti Das, Ryan M. Young, Paige J. Brown, Jessica E. Hornick, Jacob A. Weber, James S. W. Seale, Charlotte L. Stern, Michael R. Wasielewski, and J. Fraser Stoddart
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Colloid and Surface Chemistry ,Polymers ,Pyridines ,Alcohols ,Water ,General Chemistry ,Biochemistry ,Catalysis ,Fluorescent Dyes - Abstract
Polar and polarizable π-conjugated organic molecules containing push-pull chromophores have been investigated extensively in the past. Identifying unique backbones and building blocks for fluorescent dyes is a timely exercise. Here, we report the synthesis and characterization of a series of fluorescent dyes containing quadrupolar A-D-A constitutions (where A = acceptor and D = donor), which exhibit fluorescence emission at a variety of different wavelengths. We have investigated the effects of different electron-withdrawing groups, located at both termini of a
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- 2022
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21. Separation of Aromatic Hydrocarbons in Porous Materials
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Karam B. Idrees, Zhao Li, Haomiao Xie, Kent O. Kirlikovali, Masoud Kazem-Rostami, Xingjie Wang, Xijun Wang, Tzu-Yi Tai, Timur Islamoglu, J. Fraser Stoddart, Randall Q. Snurr, and Omar K. Farha
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Colloid and Surface Chemistry ,Isomerism ,Adsorption ,General Chemistry ,Xylenes ,Porosity ,Biochemistry ,Metal-Organic Frameworks ,Catalysis - Abstract
Industrial-scale thermal separation processes have contributed greatly to the rise in carbon dioxide emissions. Porous materials, such as metal-organic frameworks (MOFs), can potentially reduce these emissions by achieving nonthermal chemical separations through the physical adsorption of targeted species with high selectivity. Here, we report the synthesis of the channel-based MOFs
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- 2022
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22. Coherent Vibronic Wavepackets Show Structure-Directed Charge Flow in Host–Guest Donor–Acceptor Complexes
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Taeyeon Kim, Yuanning Feng, James P. O’Connor, J. Fraser Stoddart, Ryan M. Young, and Michael R. Wasielewski
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Published
- 2023
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23. Strain imposed by knotting
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Liang Zhang and J. Fraser Stoddart
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General Chemical Engineering ,Biochemistry (medical) ,Materials Chemistry ,Environmental Chemistry ,General Chemistry ,Biochemistry - Published
- 2022
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24. Mechanically interlocked pyrene-based photocatalysts
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Amine Garci, Jacob A. Weber, Ryan M. Young, Masoud Kazem-Rostami, Marco Ovalle, Yassine Beldjoudi, Ahmet Atilgan, Youn Jue Bae, Wenqi Liu, Leighton O. Jones, Charlotte L. Stern, George C. Schatz, Omar K. Farha, Michael R. Wasielewski, and J. Fraser Stoddart
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Process Chemistry and Technology ,Bioengineering ,Biochemistry ,Catalysis - Published
- 2022
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25. Polysilicon Microchips Functionalized with Bipyridinium-Based Cyclophanes for a Highly Efficient Cytotoxicity in Cancerous Cells
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David Limón, Jessica E. Hornick, Kang Cai, Yassine Beldjoudi, Marta Duch, Jose A. Plaza, Lluïsa Pérez-García, and J. Fraser Stoddart
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Cell Membrane ,General Engineering ,Humans ,General Physics and Astronomy ,General Materials Science ,Lipid Peroxidation ,HeLa Cells - Abstract
The use of micrometric-sized vehicles could greatly improve selectivity of cytotoxic compounds as their lack of self-diffusion could maximize their retention in tissues. We have used polysilicon microparticles (bSiμP/b) to conjugate bipyridinium-based compounds, able to induce cytotoxicity under regular intracellular conditions. Homogeneous functionalization in suspension was achieved, where the open-chain structure exhibits a more dense packing than cyclic analogues. The microparticles internalized induce high cytotoxicity per particle in cancerous HeLa cells, and the less densely packed functionalization using cyclophanes promotes higher cytotoxicity per bipy than with open-chain analogues. The self-renewing ability of the particles and their proximity to cell membranes may account for increased lipid peroxidation, achieving toxicity at much lower concentrations than that in solution and in less time, inducing highly efficient cytotoxicity in cancerous cells.
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- 2022
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26. BODIPY-Based Polymers of Intrinsic Microporosity for the Photocatalytic Detoxification of a Chemical Threat
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Ahmet Atilgan, Yassine Beldjoudi, Jierui Yu, Kent O. Kirlikovali, Jacob A. Weber, Jian Liu, Dahee Jung, Pravas Deria, Timur Islamoglu, J. Fraser Stoddart, Omar K. Farha, and Joseph T. Hupp
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General Materials Science - Abstract
Effective heterogeneous photocatalysts capable of detoxifying chemical threats in practical settings must exhibit outstanding device integrity. We report a copolymerization that yields robust, porous, processible, chromophoric BODIPY (BDP; boron-dipyrromethene)-containing polymers of intrinsic microporosity (BDP-PIMs). Installation of a pentafluorophenyl at the meso position of a BDP produced reactive monomer that when combined with 5,5,6,6-tetrahydroxy-3,3,3,3-tetramethyl-1,1-spirobisindane (TTSBI) and tetrafluoroterephthalonitrile (TFTPN) yields
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- 2022
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27. Whither Second-Sphere Coordination?
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Partha Jyoti Das, J. Fraser Stoddart, Howard M. Colquhoun, and Wenqi Liu
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Crystallography ,Chemistry ,Modulation ,General Chemistry ,Receptor - Abstract
The properties of coordination complexes are dictated by both the metals and the ligands. The use of molecular receptors as second-sphere ligands enables significant modulation of the chemical and physical properties of coordination complexes. In this Mini-Review, we highlight recent advances in functional systems based on molecular receptors as second-sphere coordination ligands, as applied in molecular recognition, synthesis of mechanically interlocked molecules, separation of metals, catalysis, and biomolecular chemistry. These functional systems demonstrate\ud that second-sphere coordination is an emerging and very promising strategy for addressing societal challenges in health, energy, and the environment.
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- 2022
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28. Weak bonding strategies for achieving regio- and site-selective transformations
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Yang Jiao, Xiao-Yang Chen, and J. Fraser Stoddart
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General Chemical Engineering ,Biochemistry (medical) ,Materials Chemistry ,Environmental Chemistry ,General Chemistry ,Biochemistry - Published
- 2022
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29. Discovery of spontaneous de-interpenetration through charged point-point repulsions
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Diego A. Gómez-Gualdrón, Katarina Zosel, Austin M. Evans, J. Fraser Stoddart, Omar K. Farha, Ryther Anderson, Peng Li, Xuan Zhang, Lee Robison, Debmalya Ray, Julia G. Knapp, Christos D. Malliakas, Saumil Chheda, Timur Islamoglu, Sylvia L. Hanna, Penghao Li, Laura Gagliardi, Xingjie Wang, Megan C. Wasson, William R. Dichtel, and Ken-ichi Otake
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Materials science ,Hydrogen bond ,General Chemical Engineering ,Biochemistry (medical) ,Intermolecular force ,General Chemistry ,Quantum entanglement ,Biochemistry ,Chemical physics ,Materials Chemistry ,Environmental Chemistry ,Molecule ,Metal-organic framework ,Point (geometry) ,Density functional theory ,Porosity - Abstract
Summary Energetically driven reduction of porosity through entanglement is ubiquitous in nature and synthetic systems. This entanglement decreases valuable internal pore space useful for applications, such as catalysis, storage, and sensing. Here, we describe the discovery of spontaneous de-interpenetration in a 6-fold interpenetrated uranium-based metal-organic framework (MOF), NU-1303-6. De-interpenetration transforms NU-1303-6 (14.2 and 19.8 A pores) to its larger pore (40.7 A) non-interpenetrated counterpart, which possesses a record-high 96.6% void fraction and 9.2 cm3g−1 pore volume. Density functional theory calculations reveal that charged point-point repulsions between anionic, closely positioned uranium-based nodes drive this phenomenon. These repulsions compete with water molecules that hydrogen bond nearby networks together, favoring interpenetration. Controlling the interplay between these intermolecular forces enables the reversal of omnipresent energetic equilibria, leading to thermodynamically favored open pore structures. The discovery of charged point-point repulsion will likely lead to the re-evaluation of non-interpenetrated network design, synthesis, and wide-reaching applications.
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- 2022
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30. Fluorescent cyclophanes and their applications
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Indranil Roy, Arthur H. G. David, Partha Jyoti Das, David J. Pe, and J. Fraser Stoddart
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General Chemistry - Abstract
With the serendipitous discovery of crown ethers by Pedersen more than half a century ago and the subsequent introduction of host-guest chemistry and supramolecular chemistry by Cram and Lehn, respectively, followed by the design and synthesis of wholly synthetic cyclophanes-in particular, fluorescent cyclophanes, having rich structural characteristics and functions-have been the focus of considerable research activity during the past few decades. Cyclophanes with remarkable emissive properties have been investigated continuously over the years and employed in numerous applications across the field of science and technology. In this Review, we feature the recent developments in the chemistry of fluorescent cyclophanes, along with their design and synthesis. Their host-guest chemistry and applications related to their structure and properties are highlighted.
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- 2022
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31. Making chiral molecular knots and links stereospecifically
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Huang Wu, Chun Tang, Long Zhang, and J Fraser Stoddart
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Multidisciplinary - Published
- 2023
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32. An electric molecular motor
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Long Zhang, Yunyan Qiu, Wei-Guang Liu, Hongliang Chen, Dengke Shen, Bo Song, Kang Cai, Huang Wu, Yang Jiao, Yuanning Feng, James S. W. Seale, Cristian Pezzato, Jia Tian, Yu Tan, Xiao-Yang Chen, Qing-Hui Guo, Charlotte L. Stern, Douglas Philp, R. Dean Astumian, William A. Goddard, J. Fraser Stoddart, University of St Andrews. School of Chemistry, University of St Andrews. Biomedical Sciences Research Complex, and University of St Andrews. EaSTCHEM
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MCC ,Multidisciplinary ,DAS ,QD ,QD Chemistry - Abstract
Macroscopic electric motors continue to have a large impact on almost every aspect of modern society. Consequently, the effort towards developing molecular motors1–3 that can be driven by electricity could not be more timely. Here we describe an electric molecular motor based on a [3]catenane4,5, in which two cyclobis(paraquat-p-phenylene)6 (CBPQT4+) rings are powered by electricity in solution to circumrotate unidirectionally around a 50-membered loop. The constitution of the loop ensures that both rings undergo highly (85%) unidirectional movement under the guidance of a flashing energy ratchet7,8, whereas the interactions between the two rings give rise to a two-dimensional potential energy surface (PES) similar to that shown by FOF1 ATP synthase9. The unidirectionality is powered by an oscillating10 voltage11,12 or external modulation of the redox potential13. Initially, we focused our attention on the homologous [2]catenane, only to find that the kinetic asymmetry was insufficient to support unidirectional movement of the sole ring. Accordingly, we incorporated a second CBPQT4+ ring to provide further symmetry breaking by interactions between the two mobile rings. This demonstration of electrically driven continual circumrotatory motion of two rings around a loop in a [3]catenane is free from the production of waste products and represents an important step towards surface-bound14 electric molecular motors.
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- 2023
33. The making of aromatic molecular Möbius belts
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Qing-Hui Guo and J. Fraser Stoddart
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General Chemical Engineering ,Biochemistry (medical) ,Materials Chemistry ,Environmental Chemistry ,General Chemistry ,Biochemistry - Published
- 2022
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34. The Nature of the Mechanical Bond: From Molecules to Machines
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Carson J. Bruns, J. Fraser Stoddart
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- 2016
35. Active mechanisorption driven by pumping cassettes
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Kun He, Liang Feng, J. Fraser Stoddart, James S. W. Seale, Omar K. Farha, Yuanning Feng, Huang Wu, Yunyan Qiu, R. Dean Astumian, Qing-Hui Guo, and Zhijie Chen
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Focus (computing) ,symbols.namesake ,Multidisciplinary ,Adsorption ,Materials science ,Physisorption ,Chemical physics ,symbols ,van der Waals force - Abstract
Over the past century, adsorption has been investigated extensively in equilibrium systems, with a focus on the van der Waals interactions associated with physisorption and electronic interactions in the case of chemisorption. In this study, we demonstrate mechanisorption, which results from nonequilibrium pumping to form mechanical bonds between the adsorbent and the adsorbate. This active mode of adsorption has been realized on surfaces of metal-organic frameworks grafted with arrays of molecular pumps. Adsorbates are transported from one well-defined compartment, the bulk, to another well-defined compartment, the interface, thereby creating large potential gradients in the form of chemical capacitors wherein energy is stored in metastable states. Mechanisorption extends, in a fundamental manner, the scope and potential of adsorption phenomena and offers a transformative approach to control chemistry at surfaces and interfaces.
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- 2021
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36. Promotion and suppression of single-molecule conductance by quantum interference in macrocyclic circuits
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Bo Song, Colin J. Lambert, Yang Jiao, Qing-Hui Guo, Long Zhang, Hongliang Chen, Feng Jiang, J. Fraser Stoddart, Xiao-Yang Chen, Ping Zhou, S. R. Hou, Qingqing Wu, and Wenjing Hong
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Materials science ,02 engineering and technology ,Electron ,010402 general chemistry ,Interference (wave propagation) ,01 natural sciences ,chemistry.chemical_compound ,Atomic orbital ,General Materials Science ,Molecular orbital ,HOMO/LUMO ,Physics ,business.industry ,Molecular electronics ,Conductance ,Fermi energy ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,chemistry ,Nanoelectronics ,Chemical physics ,visual_art ,Electronic component ,visual_art.visual_art_medium ,Optoelectronics ,0210 nano-technology ,business ,Cyclophane - Abstract
Summary Single-molecule electronics is a sub-field of nanoelectronics in which individual devices are formed from single molecules placed between source and drain electrodes. During the past few years, scientists have demonstrated that the flow of electricity through these devices is controlled by quantum interference (QI) between electrons passing from source to drain. Their future development, however, is hampered by difficulties in controlling interference effects. Herein, we demonstrate that electron transport in tetracationic cyclophane circuits is mediated by QI between channels formed from two lowest unoccupied molecular orbitals (LUMOs), while their highest occupied molecular orbitals (HOMOs) play no significant role. Energy differences between these two LUMO channels induce constructive interference, leading to high conductance. By contrast, phase differences between these LUMO channels result in destructive interference and a suppression in overall conductance. Such a design of single-molecule circuits enables the construction of single-molecule conductors and insulators based on a single cyclophane platform.
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- 2021
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37. Thermally Controlled Exciplex Fluorescence in a Dynamic Homo[2]catenane
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Amine Garci, Arthur H. G. David, Laura Le Bras, Marco Ovalle, Seifallah Abid, Ryan M. Young, Wenqi Liu, Chandra S. Azad, Paige J. Brown, Michael R Wasielewski, and J. Fraser Stoddart
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Abstract
Motion-induced change in emission (MICE) is a phenomenon that can be employed to develop various types of probes, including temperature and viscosity sensors. Although MICE, arising from the conformational motion in particular compounds, has been studied extensively, this phenomenon has not been investigated in depth in mechanically interlocked molecules (MIMs) undergoing coconformational changes. Herein, we report the investigation of a thermoresponsive dynamic homo[2]catenane incorporating pyrene units and displaying relative circumrotational motions of its cyclophanes as evidenced by variable-temperature
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- 2022
38. Tröger's Base Chemistry in Solution and in Zr(IV)-Based Metal-Organic Frameworks
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Wei Gong, Masoud Kazem-Rostami, Florencia A. Son, Shengyi Su, Kira M. Fahy, Haomiao Xie, Timur Islamoglu, Yan Liu, J. Fraser Stoddart, Yong Cui, and Omar K. Farha
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Abstract
Tröger's base (TB) and its derivatives have been studied extensively due to their unique concave shape stemming from the endomethylene strap. However, the strap-clipped TB chemistry has been largely overlooked in metal-organic framework (MOF) solids, leading to a gap in our knowledge within this field. In this work, we report the in situ strap elimination of a carboxylate-carrying TB in the presence of formic acid, both in solution and in Zr(IV)-based MOFs. In the solution system, the methanodiazocine nucleus can be exclusively transformed into an
- Published
- 2022
39. The Story of the Little Blue Box: A Tribute to Siegfried Hünig
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Xiao‐Yang Chen, Hongliang Chen, and J. Fraser Stoddart
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General Medicine ,General Chemistry ,Catalysis - Abstract
The tetracationic cyclophane, cyclobis(paraquat-p-phenylene), also known as the little blue box, constitutes a modular receptor that has facilitated the discovery of many host-guest complexes and mechanically interlocked molecules during the past 35 years. Its versatility in binding small π-donors in its tetracationic state, as well as forming trisradical tricationic complexes with viologen radical cations in its doubly reduced bisradical dicationic state, renders it valuable for the construction of various stimuli-responsive materials. Since the first reports in 1988, the little blue box has been featured in over 500 publications in the literature. All this research activity would not have been possible without the seminal contributions carried out by Siegfried Hünig, who not only pioneered the syntheses of viologen-containing cyclophanes, but also revealed their rich redox chemistry in addition to their ability to undergo intramolecular π-dimerization. This Review describes how his pioneering research led to the design and synthesis of the little blue box, and how this redox-active host evolved into the key component of molecular shuttles, switches, and machines.
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- 2022
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40. Corralarenes: A Family of Conjugated Tubular Hosts
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Han Han, Rong Fu, Ruiguo Wang, Chun Tang, Miao-Miao He, Jia-Ying Deng, Dong-Sheng Guo, J. Fraser Stoddart, and Kang Cai
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Colloid and Surface Chemistry ,Circular Dichroism ,Molecular Conformation ,Solvents ,General Chemistry ,Biochemistry ,Catalysis - Abstract
Despite the advances in host-guest chemistry, macrocyclic hosts with deep cavities are far from abundant among the large number of wholly synthetic hosts described in the literature. Herein, we describe the design and synthesis of two new tubular hosts, namely, corral[4]arene and corral[5]arene. The former has been isolated and characterized as two conformational diastereoisomers, one is centrosymmetric and the other asymmetric. The latter, a fivefold symmetrical and flexible host, has also been investigated in detail. It is composed of five 4,4'-dimethoxybiphenyl units bridged by ethynylene linkers at their 2,2'-positions and adopts a pentagonal conformation with a tubular-shaped cavity in the presence of guests. This structure endows corral[5]arene not only with a conjugated backbone, capable of bright fluorescent emission (quantum yield, 56%), but also a deep π-electron-rich aromatic cavity with remarkable conformational flexibility. The adaptive cavity of corral[5]arene allows it to accommodate a wide range of neutral and positively charged electron-deficient guests with different molecular sizes and shapes. Binding constants between this host and these guests in three different nonpolar organic solvents lie in the range of 10
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- 2022
41. PCage: Fluorescent Molecular Temples for Binding Sugars in Water
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George C. Schatz, Yu Tan, J. Fraser Stoddart, Xiao-Yang Chen, Yunyan Qiu, Long Zhang, Bo Song, Yuanning Feng, Leighton O. Jones, Wenqi Liu, and Qing-Hui Guo
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Aqueous solution ,Hydrogen bond ,General Chemistry ,Carbohydrate ,Biochemistry ,Fluorescence ,Combinatorial chemistry ,Catalysis ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Synthetic Receptors ,Pyrene ,Pyridinium ,Receptor - Abstract
The development of synthetic receptors that recognize carbohydrates in water with high selectivity and specificity is challenging on account of their structural complexity and strong hydrophilicity. Here, we report on the design and synthesis of two pyrene-based, temple-shaped receptors for the recognition of a range of common sugars in water. These receptors rely on the use of two parallel pyrene panels, which serve as roofs and floors, capable of forming multiple [C-H···π] interactions with the axially oriented C-H bonds on glycopyranosyl rings in the carbohydrate-based substrates. In addition, eight polarized pyridinium C-H bonds, projecting from the roofs and floors of the temple receptors toward the binding cavities, form [C-H···O] hydrogen bonds, with the equatorially oriented OH groups on the sugars located inside the hydrophobic cavities. Four para-xylylene pillars play a crucial role in controlling the distance between the roof and floor. These temple receptors are highly selective for the binding of glucose and its derivatives. Furthermore, they show enhanced fluorescence upon binding with glucose in water, a property which is useful for glucose-sensing in aqueous solution.
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- 2021
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42. Chiroptical Properties of Mechanically Interlocked Molecules
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J. Fraser Stoddart and Arthur H. G. David
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Chemistry ,Chemical physics ,Catenane ,Molecule ,General Chemistry ,Chirality (chemistry) - Published
- 2021
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43. Radically Enhanced Dual Recognition
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Xingang Zhao, J. Fraser Stoddart, Bo Song, Xiao-Yang Chen, Dengke Shen, Yong Wu, Kang Cai, Yang Jiao, Long Zhang, Haochuan Mao, Huang Wu, Hongliang Chen, Yuanning Feng, Charlotte L. Stern, and Michael R. Wasielewski
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Chemistry ,Diradical ,Cooperativity ,Viologen ,General Medicine ,General Chemistry ,Catalysis ,law.invention ,Dication ,Crystallography ,Molecular recognition ,Radical ion ,law ,medicine ,Molecule ,Electron paramagnetic resonance ,medicine.drug - Abstract
Complexation between a viologen radical cation (V.+ ) and cyclobis(paraquat-p-phenylene) diradical dication (CBPQT2(.+) ) has been investigated and utilized extensively in the construction of mechanically interlocked molecules (MIMs) and artificial molecular machines (AMMs). The selective recognition of a pair of V.+ using radical-pairing interactions, however, remains a formidable challenge. Herein, we report the efficient encapsulation of two methyl viologen radical cations (MV.+ ) in a size-matched bisradical dicationic host - namely, cyclobis(paraquat-2,6-naphthalene)2(.+) , i.e., CBPQN2(.+) . Central to this dual recognition process was the choice of 2,6-bismethylenenaphthalene linkers for incorporation into the bisradical dicationic host. They provide the space between the two bipyridinium radical cations in CBPQN2(.+) suitable for binding two MV.+ with relatively short (3.05-3.25 A) radical-pairing distances. The size-matched bisradical dicationic host was found to exhibit highly selective and cooperative association with the two MV.+ in MeCN at room temperature. The formation of the tetrakisradical tetracationic inclusion complex - namely, [(MV)2 ⊂CBPQN]4(.+) - in MeCN was confirmed by VT 1 H NMR, as well as by EPR spectroscopy. The solid-state superstructure of [(MV)2 ⊂CBPQN]4(.+) reveals an uneven distribution of the binding distances (3.05, 3.24, 3.05 A) between the three different V.+ , suggesting that localization of the radical-pairing interactions has a strong influence on the packing of the two MV.+ inside the bisradical dicationic host. Our findings constitute a rare example of binding two radical guests with high affinity and cooperativity using host-guest radical-pairing interactions. Moreover, they open up possibilities of harnessing the tetrakisradical tetracationic inclusion complex as a new, orthogonal and redox-switchable recognition motif for the construction of MIMs and AMMs.
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- 2021
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44. The Rise and Promise of Molecular Nanotopology
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J. Fraser Stoddart, Qing-Hui Guo, Yuanning Feng, and Yang Jiao
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Physics ,stomatognathic diseases ,Field (physics) ,Mechanical bond ,Confluence ,otorhinolaryngologic diseases ,General Chemistry ,Template synthesis ,Topology ,Topology (chemistry) ,Term (time) - Abstract
Molecular nanotopology—a term we coined recently—is a rapidly developing field of research that is emerging out of the confluence of chemical topology with the mechanical bond. When perusing the in...
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- 2021
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45. Aggregation-Induced Emission and Circularly Polarized Luminescence Duality in Tetracationic Binaphthyl-Based Cyclophanes
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Amine Garci, Seifallah Abid, Arthur H. G. David, Marcos D. Codesal, Luka Đorđević, Ryan M. Young, Hiroaki Sai, Laura Le Bras, Aurélie Perrier, Marco Ovalle, Paige J. Brown, Charlotte L. Stern, Araceli G. Campaña, Samuel I. Stupp, Michael R. Wasielewski, Victor Blanco, and J. Fraser Stoddart
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Luminescence ,Aggregation-Induced Emission ,Chirality ,Circularly Polarized Luminescence ,Macrocycles ,Optoelectronics ,Stereoisomerism ,General Chemistry ,General Medicine ,Catalysis ,Luminescent Measurements ,Fluorescent Dyes - Abstract
Here, we report an approach to the synthesis of highly charged enantiopure cyclophanes by the insertion of axially chiral enantiomeric binaphthyl fluorophores into the constitutions of pyridinium-based macrocycles. Remarkably, these fluorescent tetracationic cyclophanes exhibit a significant AIE compared to their neutral optically active binaphthyl precursors. A combination of theoretical calculations and time-resolved spectroscopy reveal that the AIE originates from limited torsional vibrations associated with the axes of chirality present in the chiral enantiomeric binaphthyl units and the fine-tuning of their electronic landscape when incorporated within the cyclophane structure. Furthermore, these highly charged enantiopure cyclophanes display CPL responses both in solution and in the aggregated state. This unique duality of AIE and CPL in these tetracationic cyclophanes is destined to be of major importance in future development of photonic devices and bio-applications., National Science Foundation (NSF) DMR-2003739, United States Department of Energy (DOE) DE-SC0000989, SHyNE Resource NSF ECCS-2025633, IIN, Northwestern's MRSEC program NSF DMR-1720139, MCIN/AIE EQC2019-006543-P, ERDF A way of making Europe, FEDER(ERDF)/Junta de Andalucia-Consejeria de Transformacion Economica, Industria, Conocimiento y Universidades P18-FR-2877
- Published
- 2022
46. Selective Separation of Hexachloroplatinate(IV) Dianions Based on Exo‐Binding with Cucurbit[6]uril
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Yu Wang, Bo Song, Long Zhang, Leighton O. Jones, Charlotte L. Stern, Wenqi Liu, George C. Schatz, Huang Wu, Xiao-Yang Chen, and J. Fraser Stoddart
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Chemistry ,Hydrogen bond ,Supramolecular chemistry ,chemistry.chemical_element ,General Chemistry ,General Medicine ,Highly selective ,Chloride ,Combinatorial chemistry ,Catalysis ,Metal ,chemistry.chemical_compound ,visual_art ,medicine ,visual_art.visual_art_medium ,Hexachloroplatinate ,Platinum ,medicine.drug - Abstract
Since anions are vital for many chemical, biological and environmental processes, their recognition and separation continue to attract attention from chemists, materials scientists and engineers. Employing exo-binding of artificial macrocycles to recognize selectively anions remains a challenge in supramolecular chemistry. Herein, we report the instantaneous co-crystallization and concomitant co-precipitation between hexachloroplatinate dianions and cucurbit[6]uril, a phenomenon which relies on the selective recognition of these dianions through the noncovalent bonding interactions on the outer surface of cucurbit[6]uril. The selective hexachloroplatinate dianion recognition is driven by the weak [Pt-Cl···H-C] hydrogen bonding and [Pt-Cl···C=O] ion-dipole interactions. The synthetic protocol is highly selective. It is not observed in combinations between cucurbit[6]uril and other Pt- and Pd- or Rh-based chloride anions. We have also demonstrated that cucurbit[6]uril is able to separate selectively hexachloroplatinate dianions from mixtures of hexachloroplatinate, tetrachloropalladate, and hexachlororhodate anions. This highly selective and fast co-crystallization process, in principle, could be exploited to recover platinum from the spent vehicular three-way catalytic converters and other platinum-bearing metal waste.
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- 2021
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47. Radical-pairing-induced molecular assembly and motion
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Kang Cai, J. Fraser Stoddart, Long Zhang, and R. Dean Astumian
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Molecular switch ,Materials science ,Hydrogen bond ,General Chemical Engineering ,media_common.quotation_subject ,Supramolecular chemistry ,Nanotechnology ,General Chemistry ,Conjugated system ,Asymmetry ,Supramolecular assembly ,Molecular recognition ,Molecule ,media_common - Abstract
Radical-pairing interactions between conjugated organic π-radicals are relative newcomers to the inventory of molecular recognition motifs explored in supramolecular chemistry. The unique electronic, magnetic, optical and redox-responsive properties of the conjugated π-radicals render molecules designed with radical-pairing interactions useful for applications in various areas of chemistry and materials science. In particular, the ability to control formation of radical cationic or anionic species, by redox stimulation, provides a flexible trigger for directed assembly and controlled molecular motions, as well as a convenient means of inputting energy to fuel non-equilibrium processes. In this Review, we provide an overview of different examples of radical-pairing-based recognition processes and of their emerging use in (1) supramolecular assembly, (2) templation of mechanically interlocked molecules, (3) stimuli-controlled molecular switches and, by incorporation of kinetic asymmetry in the design, (4) the creation of unidirectional molecular transporters based on pumping cassettes powered by fuelled switching of radical-pairing interactions. We conclude the discussion with an outlook on future directions for the field. Radical-pairing interactions were, until recently, considered something of a chemical curiosity. But these weak interactions, on par with hydrogen bonds, are easily switched on and off and, as a result, have become widely exploited in supramolecular chemistry, particularly in the assembly of out-of-equilibrium structures.
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- 2021
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48. Electron-Catalyzed Dehydrogenation in a Single-Molecule Junction
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Feng Jiang, Chen Hu, Ping Zhou, Su Chen, Bo Song, J. Fraser Stoddart, Kang Cai, Michael R. Wasielewski, Long Zhang, Hongliang Chen, Yunyan Qiu, Wenjing Hong, Hong Guo, Xingang Zhao, Yang Jiao, and Xiao-Yang Chen
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Chemistry ,Conductance ,Molecular electronics ,General Chemistry ,Electron ,Conjugated system ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Redox ,Catalysis ,0104 chemical sciences ,Colloid and Surface Chemistry ,Chemical physics ,Molecule ,Dehydrogenation - Abstract
Investigating how electrons propagate through a single molecule is one of the missions of molecular electronics. Electrons, however, are also efficient catalysts for conducting radical reactions, a property that is often overlooked by chemists. Special attention should be paid to electron catalysis when interpreting single-molecule conductance results for the simple reason that an unexpected reaction mediated or triggered by electrons might take place in the single-molecule junction. Here, we describe a counterintuitive structure-property relationship that molecules, both linear and cyclic, employing a saturated bipyridinium-ethane backbone, display a similar conductance signature when compared to junctions formed with molecules containing conjugated bipyridinium-ethene backbones. We describe an ethane-to-ethene transformation, which proceeds in the single-molecule junction by an electron-catalyzed dehydrogenation. Electrochemically based ensemble experiments and theoretical calculations have revealed that the electrons trigger the redox process, and the electric field promotes the dehydrogenation. This finding not only demonstrates the importance of electron catalysis when interpreting experimental results, but also charts a pathway to gaining more insight into the mechanism of electrocatalytic hydrogen production at the single-molecule level.
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- 2021
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49. Diverse Proton-Conducting Nanotubes via a Tandem Macrocyclization and Assembly Strategy
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Emily K. Roesner, Anton D. Chavez, J. Fraser Stoddart, Ioannina Castano, Alan E. Enciso, Manping Jia, Marco Rolandi, Michael J. Strauss, Austin M. Evans, Jeremy L. Swartz, Rebecca L. Li, Xavier Aguilar-Enriquez, and William R. Dichtel
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chemistry.chemical_classification ,Nanotube ,Macrocyclic Compounds ,Nanotubes ,Molecular Structure ,Imine ,Protonation ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Catalysis ,0104 chemical sciences ,Supramolecular polymers ,chemistry.chemical_compound ,Crystallography ,Colloid and Surface Chemistry ,Monomer ,chemistry ,Cyclization ,Diamine ,Pyridine ,Self-assembly ,Protons - Abstract
Macrocycles that assemble into nanotubes exhibit emergent properties stemming from their low dimensionality, structural regularity, and distinct interior environments. We report a versatile strategy to synthesize diverse nanotube structures in a single, efficient reaction by using a conserved building block bearing a pyridine ring. Imine condensation of a 2,4,6-triphenylpyridine-based diamine with various aromatic dialdehydes yields chemically distinct pentagonal [5 + 5], hexagonal [3 + 3], and diamond-shaped [2 + 2] macrocycles depending on the substitution pattern of the aromatic dialdehyde monomer. Atomic force microscopy and in solvo X-ray diffraction demonstrate that protonation of the macrocycles under the mild conditions used for their synthesis drives assembly into high-aspect ratio nanotubes. Each of the pyridine-containing nanotube assemblies exhibited measurable proton conductivity by electrochemical impedance spectroscopy, with values as high as 10-3 S m-1 (90% R.H., 25 °C) that we attribute to differences in their internal pore sizes. This synthetic strategy represents a general method to access robust nanotube assemblies from a universal pyridine-containing monomer, which will enable systematic investigations of their emergent properties.
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- 2021
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50. Aromatic hydrocarbon belts
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Qing-Hui Guo, Yunyan Qiu, Mei-Xiang Wang, and J. Fraser Stoddart
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Architectural engineering ,010405 organic chemistry ,Chemistry ,General Chemical Engineering ,General Chemistry ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences - Abstract
Aromatic hydrocarbon belts (AHCBs) have fascinated scientists for over half a century because of their aesthetically appealing structures and potential applications in the field of carbon nanotechnology. One of the enduring challenges in synthesizing AHCBs is how do we cope with the build-up of energy in the highly strained structures during their synthesis? Successful preparations of AHCBs offer the prospect of providing well-defined templates for the growth of uniform single-walled carbon nanotubes-a long-standing interest in nanocarbon science. In this Review, we revisit the protracted historical background involving the rational design and synthesis of AHCBs and highlight some of the more recent breakthroughs, with emphasis being placed on the different strategies that have been used for building up curved and fused benzenoid rings into molecular belts. We also discuss the scientific challenges in this fledgling field and provide some pointers as to what could transpire in years to come.
- Published
- 2021
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