214 results on '"J R, WILLIAMSON"'
Search Results
2. Association of pre-treatment somatic cell counts with bacteriological cure following diagnosis of intramammary infection
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J R, Williamson, T R, Callaway, E, Rollin, and V E, Ryman
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Mammary Glands, Animal ,Milk ,General Veterinary ,Animals ,Lactation ,Cattle Diseases ,Cattle ,Female ,Cell Count ,Mastitis, Bovine ,Anti-Bacterial Agents - Abstract
Antibiotic administration is crucial to ensure the health and productivity of dairy cattle. Mastitis is a disease that is typically a result of an intramammary infection (IMI), and antibiotic regimens are implemented to aid in curing IMI. Diagnosis is usually by detection of elevated milk somatic cell counts (SCC) and/or presence of culturable pathogens in the milk. Antibiotic treatment success is associated with the SCC at the time of treatment, though this correlation is still poorly understood. The objective of this project was to evaluate pre-treatment SCC and its association with IMI cure incidence following a standard antibiotic treatment. We hypothesized that pre-treatment SCC would be significantly lower in cases where the IMI ultimately cured compared to cases where the IMI failed to cure. Milk samples were collected aseptically from lactating cow quarters experiencing clinical or subclinical mastitis (n = 52). Clinical mastitis was diagnosed by a trained milking technician and subclinical mastitis was diagnosed at the quarter level as a SCC 200,000 cells/mL and presence of bacterical growth in milk at time of treatment. After collection of the day 0 (D0) milk samples, the SCC was enumerated, and the milk sample cultured. Intramammary antibiotic therapy Cetftiofur hydrochloride (Spectramast® LC) was administered once/day for 5 days. Post-treatment samples were collected 14 d (D14) and 28 d (D28) later. A bacteriological cure was confirmed when both the D14 and D28 samples were free of culturable pathogens. The overall cure rate was 46.2%. Interestingly, the cure rates of antibiotic therapy decreased as pre-treatment SCC increased. Quarters that experienced bacteriological cure demonstrated a lower pre-treatment SCC (507,041 cells/mL ± 127.86 SEM, P = 0.01) compared to cows that did not cure, which had high pre-treatment SCC (1,640,392 cells/mL ± 333.28 SEM). Quarters that failed to cure had higher SCC values 28 days post-treatment in comparison to quarters that cured (P 0.001). Future studies should investigate whether we can develop unique SCC-dependent mastitis treatment protocols which increase mastitis cure rates and enhance overall mammary health.
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- 2022
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3. Role of Imbalances in Myoinositol Metabolism in Diabetes-Induced Hemodynamic and Permeability Changes in Rats: Effects of Myoinositol-Supplemented Diets
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Amanda Speedy, Giuseppe Pugliese, D. Andreani, K. Chang, J. R. Williamson, and R. G. Tilton
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Blood capillary ,medicine.medical_specialty ,Endocrinology ,Permeability (electromagnetism) ,Internal medicine ,Diabetes mellitus ,medicine ,Hemodynamics ,Metabolism ,Biology ,Complication ,medicine.disease - Published
- 2015
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4. a-Ketoisovalerate Metabolism in Liver and Interactions with Other Metabolic Pathways
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Barbara E. Corkey, Ángeles Martín-Requero, K. E. Coll, J. R. Williamson, and E Walajtys-Rode
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Metabolic pathway ,Biochemistry ,Chemistry ,Metabolism - Published
- 2015
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5. The influence of forest site on rate and extent of soil compaction and profile disturbance of skid trails during ground-based harvesting
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J R Williamson and W A Neilsen
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Global and Planetary Change ,Ecology ,Skid (automobile) ,Soil organic matter ,Soil compaction ,Environmental science ,Soil horizon ,Forestry ,Soil classification ,Soil science ,Site index ,Bulk density ,Soil quality - Abstract
Soil compaction has been considered a principal form of damage associated with logging, restricting root growth and reducing productivity. The rate and extent of soil compaction on skid trails was measured at six field locations covering a range of dry and wet forests. Data was collected for up to 21 passes of a laden logging machine. A similar extent of compaction, averaging 0.17 g·cm-3 increase in total soil bulk density (BD), was recorded for all field sites despite substantial site and soil differences. On average, 62% of the compaction in the top 10 cm of the soil occurred after only one pass of a laden logging machine. The environment under which soils had formed played a major role in determining the BD of the undisturbed soil. Compaction was strongly related to the original BD, forest type, and soil parent material. Soil strengths obtained in the field fell below levels found to restrict root growth. However, reduction in macropores, and the effect of that on aeration and drainage could reduce tree growth. On the wettest soils logged, machine forces displaced topsoils rather than causing compaction in situ. Recommended logging methods and implications for the development of sustainability indices are discussed.
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- 2000
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6. Discordant effects of guanidines on renal structure and function and on regional vascular dysfunction and collagen changes in diabetic rats
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J. R. Nyengaard, K. Chang, S. Berhorst, K. M. Reiser, J. R. Williamson, and R. G. Tilton
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Endocrinology, Diabetes and Metabolism ,Internal Medicine - Published
- 1997
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7. LY290181, an inhibitor of diabetes-induced vascular dysfunction, blocks protein kinase C-stimulated transcriptional activation through inhibition of transcription factor binding to a phorbol response element
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K. A. Birch, W. F. Heath, R. N. Hermeling, C. M. Johnston, L. Stramm, C. Dell, C. Smith, J. R. Williamson, and A. Reifel-Miller
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Endocrinology, Diabetes and Metabolism ,Internal Medicine - Published
- 1996
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8. Effect of aminoguanidine on the frequency of neuroaxonal dystrophy in the superior mesenteric sympathetic autonomic ganglia of rats with streptozocin-induced diabetes
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R. E. Schmidt, D. A. Dorsey, L. N. Beaudet, K. M. Reiser, J. R. Williamson, and R. G. Tilton
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Endocrinology, Diabetes and Metabolism ,Internal Medicine - Published
- 1996
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9. Inhibition of sorbitol dehydrogenase. Effects on vascular and neural dysfunction in streptozocin-induced diabetic rats
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J. R. Williamson, Ronald G. Tilton, M K Van den Enden, J. R. Nyengaard, Yasuo Ido, and K. Chang
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Male ,L-Iditol 2-Dehydrogenase ,medicine.medical_specialty ,Sorbitol dehydrogenase ,Endocrinology, Diabetes and Metabolism ,Fructose ,Biology ,Eye ,Retina ,Diabetes Mellitus, Experimental ,Rats, Sprague-Dawley ,chemistry.chemical_compound ,Diabetic Neuropathies ,Diabetes mellitus ,Internal medicine ,Pyruvic Acid ,medicine ,Internal Medicine ,Animals ,Sorbitol ,Lactic Acid ,Pyruvates ,Glycated Hemoglobin ,Aldose reductase ,medicine.disease ,Sciatic Nerve ,Rats ,carbohydrates (lipids) ,Pyrimidines ,Peripheral neuropathy ,Endocrinology ,chemistry ,Enzyme inhibitor ,Lactates ,biology.protein ,Sciatic nerve ,Diabetic Angiopathies - Abstract
These experiments were undertaken to assess the role of sorbitol dehydrogenase in mediating sorbitol pathway-linked neural and vascular dysfunction in rats with strep-tozocin-induced diabetes. 2-methyl-4-[N N-dimethylsulfamoyl-piperazino]-pyrimidine (S-0773), a putative inhibitor of sorbitol dehydrogenase, was given in the drinking water to control and diabetic rats. After 5 weeks of diabetes, glycosylated hemoglobin levels were increased twofold and were unaffected by S-0773. Sorbitol levels in diabetic rats were increased 11- to 14-fold in ocular tissues and sciatic nerve; S-0773 increased sorbitol levels another 4-fold or more in these same tissues but had much smaller effects in other tissues. Diabetes-associated increases in fructose levels and lactate:pyruvate ratios in retina and in sciatic nerve were markedly attenuated by S-0773. S-0773 also attenuated, but did not completely normalize, impaired caudal nerve conduction and vascular dysfunction in ocular tissues, sciatic nerve, and aorta in diabetic rats. These observations, together with other evidence, suggest that sorbitol pathway-linked vascular dysfunction (in ocular tissues, peripheral nerve, and aorta) and electrophysiological dysfunction (in peripheral nerve) induced by diabetes are more closely linked to increased oxidation of sorbitol to fructose than to putative osmotic effects of elevated sorbitol levels or redox and metabolic imbalances associated with reduction of glucose to sorbitol by aldose reductase.
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- 1995
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10. Aminoguanidine, a novel inhibitor of nitric oxide formation, prevents diabetic vascular dysfunction
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J. A. Corbett, R. G. Tilton, K. Chang, K. S. Hasan, Y. Ido, J. L. Wang, M. A. Sweetland, J. R. Lancaster, J. R. Williamson, and M. L. McDaniel
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Endocrinology, Diabetes and Metabolism ,Internal Medicine - Published
- 1992
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11. Effects of sorbinil, dietary myo-inositol supplementation, and insulin on resolution of neuroaxonal dystrophy in mesenteric nerves of streptozocin-induced diabetic rats
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R. E. Schmidt, S. B. Plurad, B. D. Coleman, J. R. Williamson, and R. G. Tilton
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Endocrinology, Diabetes and Metabolism ,Internal Medicine - Published
- 1991
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12. Diacylglycerol accumulation and microvascular abnormalities induced by elevated glucose levels
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John Turk, J R Williamson, Richard A. Easom, William R. Sherman, Bryan A. Wolf, and Kathy Chang
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Male ,medicine.medical_specialty ,Vascular permeability ,Endogeny ,Biology ,Glycerides ,Microcirculation ,Capillary Permeability ,Diglycerides ,Alkaloids ,Internal medicine ,medicine ,Animals ,Staurosporine ,Protein Kinase C ,Protein kinase C ,Diacylglycerol kinase ,Catabolism ,Albumin ,Rats, Inbred Strains ,General Medicine ,NAD ,Rats ,Glucose ,Endocrinology ,Granulation Tissue ,Tetradecanoylphorbol Acetate ,Diabetic Angiopathies ,Research Article ,medicine.drug - Abstract
The present experiments were undertaken to examine the hypothesis that glucose-induced increased de novo synthesis of 1,2-diacyl-sn-glycerol (which has been observed in a number of different tissues, including retinal capillary endothelial cells exposed to elevated glucose levels in vitro) and associated activation of protein kinase C may play a role in mediating glucose-induced vascular functional changes. We report here that twice daily instillation of 30 mM glucose over 10 d in a rat skin chamber granulation tissue model induces approximately a 2.7-fold increase in diacylglycerol (DAG) levels (versus tissues exposed to 5 mM glucose) in association with marked increases in vascular clearance of albumin and blood flow. The glucose-induced increase in DAG levels as well as the vascular functional changes are prevented by addition of 3 mM pyruvate. Pharmacological activation of protein kinase C with the phorbol ester TPA in the presence of 5 mM glucose increases microvascular albumin clearance and blood flow, and similar effects are observed with 1-monoolein (MOG), a pharmacological inhibitor of the catabolism of endogenous DAG. A pharmacological inhibitor of protein kinase C (staurosporine) greatly attenuates the rise in microvascular albumin clearance (but not the rise in blood flow) induced by glucose or by MOG. These findings are compatible with the hypothesis that elevated concentrations of glucose increase tissue DAG content via de novo synthesis, resulting in protein kinase C activation, and that these biochemical events are among the factors that generate the increased microvascular albumin clearance.
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- 1991
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13. Evaluating Barnett Shale Production Performance Using an Integrated Approach
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J. H. Frantz, J. R. Williamson, W. K. Sawyer, D. Johnston, G. Waters, L. P. Moore, R. J. MacDonald, M. Pearcy, S. V. Ganpule, and K. S. March
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Petroleum engineering ,Production (economics) ,Integrated approach ,Oil shale ,Geology - Abstract
This paper presents the results of using a shale-specific, finite-difference reservoir simulation model to history match and forecast production data from the Barnett Shale reservoir. The paper will illustrate the many uses of the model for vertical and horizontal wells including determining gas in place, recovery factors, optimal well spacing, drainage areas and drainage shapes, optimal fracture half-lengths and conductivities, infill evaluations, horizontal well modeling and optimal number of stimulation treatments, analysis of microseismic data, and compression evaluations. The model was developed in the early 1990s to incorporate all of the production mechanisms inherent in shales including matrix gas porosity, gas desorption isotherm, single-or two-phase flow of gas and water in the natural fractures, layers, complex hydraulic fractures, and variable flowing bottomhole pressures. The paper will discuss the methodology to incorporate all field data into the simulator including core, logs, well test, completion, stimulation, microseismic, and production data. Examples will be given using public datasets. We also show production comparisons between vertical and horizontal wells since this is of topical interest in the play's development history. Furthermore, we discuss the various types of data to collect, their importance to proper stimulation design, and the integration methodology to evaluate and complete shale reservoirs.
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- 2005
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14. Interaction of the Bacillus stearothermophilus ribosomal protein S15 with its 5'-translational operator mRNA
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L G, Scott and J R, Williamson
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Models, Molecular ,Ribosomal Proteins ,Operator Regions, Genetic ,Base Sequence ,Molecular Sequence Data ,Titrimetry ,RNA-Binding Proteins ,Electrophoretic Mobility Shift Assay ,Substrate Specificity ,Geobacillus stearothermophilus ,Kinetics ,RNA, Bacterial ,Protein Biosynthesis ,RNA, Ribosomal, 16S ,Mutation ,Nucleic Acid Conformation ,Amino Acid Sequence ,Cloning, Molecular ,5' Untranslated Regions - Abstract
The Bacillus stearothermophilus ribosomal protein S15 (BS15) binds both a three-helix junction in the central domain of 16 S ribosomal RNA and its cognate mRNA. Native gel mobility-shift assays show that BS15 interacts specifically and with high affinity to the 5'-untranslated region (5'-UTR) of this cognate mRNA with an apparent dissociation constant of 3(+/-0.3) nM. In order to localize the structural elements that are essential for BS15 recognition, a series of deletion mutants of the full cognate mRNA were prepared and tested in the same gel-shift assay. The minimal binding site for BS15 is a 50 nucleotide RNA showing a close secondary structure resemblance to the BS15 binding region from 16 S rRNA. There are two major structural motifs that must be maintained for high-affinity binding. The first being a purine-rich three-helix junction, and the second being an internal loop. The sequence identity of the internal loops differs greatly between the BS15 mRNA and rRNA sites, and this difference is correlated to discrimination between wild-type BS15 and a BS15(H45R) mutant. The association and dissociation kinetics measured for the 5'-UTR-BS15 interaction are quite slow, but are typical for a ribosomal protein-RNA interaction. The BS15 mRNA and 16 S rRNA binding sites share a common secondary structure yet have little sequence identity. The mRNA and rRNA may in fact present similar if not identical structural elements that confer BS15 recognition.
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- 2002
15. Central domain assembly: thermodynamics and kinetics of S6 and S18 binding to an S15-RNA complex
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M I, Recht and J R, Williamson
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Ribosomal Proteins ,Ribosomal Protein S6 ,Bacteria ,Base Sequence ,Macromolecular Substances ,Escherichia coli Proteins ,Calorimetry ,Protein Structure, Tertiary ,Kinetics ,Protein Subunits ,Bacterial Proteins ,RNA, Ribosomal, 16S ,Thermodynamics ,Dimerization ,Ribosomes ,Protein Binding - Abstract
The 30 S ribosomal subunit assembles in vitro through the hierarchical binding of 21 ribosomal proteins to 16 S rRNA. The central domain of 16 S rRNA becomes the platform of the 30 S subunit upon binding of ribosomal proteins S6, S8, S11, S15, S18 and S21. The assembly of the platform is nucleated by binding of S15 to 16 S rRNA, followed by the cooperative binding of S6 and S18. The prior binding of S6 and S18 is required for binding of S11 and S21. We have studied the mechanism of the cooperative binding of S6 and S18 to the S15-rRNA complex by isothermal titration calorimetry and gel mobility shift assays with rRNA and proteins from the hyperthermophilic bacterium Aquifex aeolicus. S6 and S18 form a stable heterodimer in solution with an apparent dissociation constant of 8.7 nM at 40 degrees C. The S6:S18 heterodimer binds to the S15-rRNA complex with an equilibrium dissociation constant of 2.7 nM at 40 degrees C. Consistent with previous studies using rRNA and proteins from Escherichia coli, we observed no binding of S6 or S18 in the absence of the other protein or S15. The presence of S15 increases the affinity of S6:S18 for the RNA by at least four orders of magnitude. The kinetics of S6:S18 binding to the S15-rRNA complex are slow, with an apparent bimolecular rate constant of 8.0 x 10(4) M(-1) s(-1) and an apparent unimolecular dissociation rate of 1.6 x 10(-4) s(-1). These results, which are consistent with a model in which S6 and S18 bind as a heterodimer to the S15-rRNA complex, provide a mechanistic framework to describe the previously observed S15-mediated cooperative binding of S6 and S18 in the ordered assembly of a multi-protein ribonucleoprotein complex.
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- 2001
16. p38beta MAP kinase protects rat mesangial cells from TNF-alpha-induced apoptosis
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Y L, Guo, B, Kang, J, Han, and J R, Williamson
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Male ,Cell Survival ,Pyridines ,Tumor Necrosis Factor-alpha ,Genetic Vectors ,Imidazoles ,NF-kappa B ,Apoptosis ,Transfection ,p38 Mitogen-Activated Protein Kinases ,Adenoviridae ,Glomerular Mesangium ,Rats ,Rats, Sprague-Dawley ,Mitogen-Activated Protein Kinase 11 ,Mutation ,Animals ,Enzyme Inhibitors ,Mitogen-Activated Protein Kinases ,Cells, Cultured - Abstract
p38 MAP kinases (p38) and c-Jun N-terminal protein kinases (JNK) have been associated with TNF-alpha-induced apoptosis. However, recent studies indicate that an early but brief activation of JNK and/or p38 may actually protect some cells from TNF-alpha-induced apoptosis. Whether the activation of JNK and p38 provides a pro- or anti-apoptotic signal for TNF-alpha has been controversial. In this study, we investigated the role of p38 in the regulation of TNF-alpha cytotoxicity in rat mesangial cells. Treatment of the cells with TNF-alpha alone had little effect on their viability, but they became very sensitive to apoptosis when treated with TNF-alpha in the presence of the p38 inhibitor SB 203580. These results suggested that the p38 pathway is critical for mesangial cells to survive the toxic effect of TNF-alpha. Using adenovirus-mediated gene transfer technique, we further demonstrated that p38beta, but not p38alpha, is essential to protect the cells from TNF-alpha toxicity. It has been speculated that there is a synergetic interaction between the p38 and the nuclear factor-kappaB (NF-kappaB) pathways in protecting certain cells from apoptosis. However, expression of neither p38beta nor its dominant negative mutant in mesangial cells interfered with TNF-alpha-induced translocation of NF-kappaB, the initial step of NF-kappaB activation. While it is unclear whether p38beta regulates NF-kappaB transcription activity at other steps, it is apparent that p38beta does not affect TNF-alpha-induced NF-kappaB activation at the stage of nuclear translocation.
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- 2001
17. The Study of Single Biomolecules with Fluorescence Methods
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X. Zhuang, Hazen P. Babcock, S. Chu, Laura E. Bartley, J. W. Orr, D. Herschlag, Hee Kyung Kim, Taekjip Ha, J. R. Williamson, and Rick Russell
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chemistry.chemical_classification ,Physics ,Förster resonance energy transfer ,chemistry ,Chemical physics ,Biomolecule ,Molecule ,Polymer physics ,Protein folding ,Polymer ,Kinetic energy ,Fluorescence - Abstract
The study of individual molecules allows one to look beyond the ensemble average and observe the distribution and time trajectory of the structure and motion of molecules. This approach has led to new paradigms in polymer physics. The study of polymer dynamics at the single-molecule level has led to the discovery that identical DNA molecules exposed to the same conditions will follow a multitude of paths to equilibrium as they extend in elongational [1] and shear [2] flows. This “molecular individualism” was not discovered in half a century of experimental work on bulk samples. Nor was it anticipated theoretically. It is possible that biological processes such as protein folding and enzyme activity will also show a rich set of kinetic paths and transient states that can only be fully characterized at the single-molecule level. Thus, it is important to develop techniques that will allow the study of molecular processes at the level of single molecules.
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- 2001
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18. Induced fit in RNA-protein recognition
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J R, Williamson
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Ribosomal Proteins ,Protein Folding ,Molecular Structure ,RNA ,RNA-Binding Proteins ,Protein Binding - Abstract
Two generalizations can be drawn from the recent rapid progress in understanding RNA-protein interactions. First, there is a great diversity of observed protein and RNA structural motifs. Second, formation of almost every RNA-protein complex that has been characterized involves conformational changes in the protein, the RNA, or both. The role of these conformational changes in the biological function of RNA-protein complexes is not at all clear. Whether or not conformational changes are a critical feature of ribonucleoprotein complex assembly or are an unimportant mechanistic detail, the ubiquity of these changes warrants careful consideration of their implications.
- Published
- 2000
19. Vascular dysfunction induced by AGE is mediated by VEGF via mechanisms involving reactive oxygen species, guanylate cyclase, and protein kinase C
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Y, Ido, K C, Chang, W S, Lejeune, R J, Bjercke, K M, Reiser, J R, Williamson, and R G, Tilton
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Glycation End Products, Advanced ,Male ,Vascular Endothelial Growth Factor A ,Lymphokines ,Vascular Endothelial Growth Factors ,Endothelial Growth Factors ,Antioxidants ,Rats ,Capillary Permeability ,Rats, Sprague-Dawley ,Guanylate Cyclase ,Regional Blood Flow ,Granulation Tissue ,Animals ,Glycated Serum Albumin ,Vascular Diseases ,Reactive Oxygen Species ,Protein Kinase C ,Serum Albumin - Abstract
These experiments were designed to elucidate mechanisms mediating vascular dysfunction induced by advanced glycation end products (AGEs).Skin chambers were mounted on the backs of Sprague-Dawley rats and 1 week later, granulation tissue that formed in the bottom of the chamber was exposed twice daily for 7 days to glycated rat serum albumin in the presence and absence of inhibitors of reactive oxygen intermediates, nitric oxide synthase and guanylate cyclase, protein kinase C (PKC), and a neutralizing vascular endothelial growth factor (VEGF) antibody. Vascular (125)I-albumin clearance and blood flow were quantified by use of a double isotope-dilution technique and radiolabeled microspheres, respectively.Albumin permeation and blood flow were increased dose-dependently to a maximum of 2 to 3 times controls by increasing the extent of glucose modification, the concentration, or the duration of exposure to glycated albumin. These increases were significantly attenuated by probucol and superoxide dismutase; N(G)-nitro-L-arginine-methyl ester (L-NAME), a nitric oxide synthase inhibitor; LY83583, a guanylate cyclase inhibitor; and LY333531, a beta-isoform-selective protein kinase C inhibitor. A neutralizing VEGF monoclonal antibody also markedly attenuated the permeability and blood flow increases induced by glycated albumin.These observations indicate potentially important roles for oxygen free-radicals and nitric oxide in mediating permeability and blood flow changes induced by glycated proteins via mechanisms involving increased protein kinase C activity and VEGF production. Striking similarities in the mechanism by which hyperglycemia and glycated proteins induce vascular dysfunction suggest that a common pathway mediates effects of these different metabolic imbalances on vascular dysfunction.
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- 2000
20. Preparation of specifically 2H- and 13C-labeled ribonucleotides
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L G, Scott, T J, Tolbert, and J R, Williamson
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Carbon Isotopes ,Magnetic Resonance Spectroscopy ,HIV-2 ,RNA, Viral ,Ribonucleotides ,Deuterium ,Chromatography, High Pressure Liquid ,Enzymes - Published
- 2000
21. Kinetic oligonucleotide hybridization for monitoring kinetic folding of large RNAs
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D K, Treiber and J R, Williamson
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Kinetics ,Base Sequence ,Molecular Sequence Data ,Oligonucleotides ,Nucleic Acid Conformation ,Nucleic Acid Hybridization ,RNA - Published
- 2000
22. Detection of N-H...N hydrogen bonding in RNA via scalar couplings in the absence of observable imino proton resonances
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M, Hennig and J R, Williamson
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Magnetic Resonance Spectroscopy ,Base Sequence ,Nitrogen ,RNA Stability ,HIV-2 ,Nucleic Acid Conformation ,RNA, Viral ,Hydrogen Bonding ,Imines ,Deuterium ,Base Pairing ,Article ,HIV Long Terminal Repeat - Abstract
Hydrogen bond networks stabilize RNA secondary and tertiary structure and are thus essentially important for protein recognition. During structure refinements using either NMR or X-ray techniques, hydrogen bonds were usually inferred indirectly from the proximity of donor and acceptor functional groups. Recently, quantitative heteronuclear J(N,N)-HNN COSY NMR experiments were introduced that allowed the direct identification of donor and acceptor nitrogen atoms involved in hydrogen bonds. However, protons involved in base pairing interactions in nucleic acids are often not observable due to exchange processes. The application of a modified quantitative J(N,N)-HNN COSY pulse scheme permits observation of(2h)J(N,N) couplings via non-exchangeable protons. This approach allowed the unambiguous identification of the A27.U23 reverse Hoogsteen base pair involved in a U-A.U base triple in the HIV-2 transactivation response element-argininamide complex. Despite a wealth of NOE information, direct evidence for this interaction was lacking due to the rapid exchange of the U23 imino proton. The ability to directly observe hydrogen bonds, even in D(2)O and in the presence of rapid exchange, should facilitate structural studies of RNA.
- Published
- 2000
23. The role of cytosolic reductive stress in oxidant formation and diabetic complications
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J R, Williamson, C, Kilo, and Y, Ido
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Diabetes Complications ,Oxidative Stress ,Cytosol ,Diabetes Mellitus ,Humans ,Oxidants ,Reactive Oxygen Species - Published
- 1999
24. A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex
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H, Mao, S A, White, and J R, Williamson
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Models, Molecular ,Ribosomal Proteins ,Binding Sites ,Base Sequence ,Amino Acid Motifs ,Molecular Sequence Data ,Hydrogen Bonding ,RNA, Fungal ,Saccharomyces cerevisiae ,Protein Structure, Secondary ,Feedback ,Fungal Proteins ,Allosteric Regulation ,Mutation ,Amino Acid Sequence ,RNA, Messenger ,Base Pairing ,Nuclear Magnetic Resonance, Biomolecular - Abstract
The yeast Saccharomyces cerevisiae ribosomal protein L30 negatively autoregulates its production by binding to a helix-loop-helix structure formed in its pre-mRNA and its mRNA. A three-dimensional solution structure of the L30 protein in complex with its regulatory RNA has been solved using NMR spectroscopy. In the complex, the helix-loop-helix RNA adopts a sharply bent conformation at the internal loop region. Unusual RNA features include a purine stack, a reverse Hoogsteen base pair (G11anti-G56syn) and highly distorted backbones. The L30 protein is folded in a three-layer alpha/beta/alpha sandwich topology, and three loops at one end of the sandwich make base-specific contacts with the RNA internal loop. The protein-RNA binding interface is divided into two clusters, including hydrophobic and aromatic stacking interactions centering around G56, and base-specific hydrogen-bonding contacts to A57, G58 and G10-U60 wobble base pair. Both the protein and the RNA exhibit a partially induced fit for binding, where loops in the protein and the internal loop in the RNA become more ordered upon complex formation. The specific interactions formed between loops on L30 and the internal loop on the mRNA constitute a novel loop-loop recognition motif where an intimate RNA-protein interface is formed between regions on both molecules that lack regular secondary structure.
- Published
- 1999
25. PACE analysis of RNA-peptide interactions
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C D, Cilley and J R, Williamson
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Ribonucleoproteins ,Autoradiography ,RNA ,RNA-Binding Proteins ,Electrophoresis, Polyacrylamide Gel ,Viral Regulatory and Accessory Proteins ,Peptides ,Protein Binding - Published
- 1999
26. Local folding coupled to RNA binding in the yeast ribosomal protein L30
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H, Mao and J R, Williamson
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Models, Molecular ,Ribosomal Proteins ,Protein Folding ,Binding Sites ,Magnetic Resonance Spectroscopy ,Circular Dichroism ,Molecular Sequence Data ,RNA-Binding Proteins ,Saccharomyces cerevisiae ,Protein Structure, Secondary ,Protein Structure, Tertiary ,RNA Precursors ,Nucleic Acid Conformation ,Amino Acid Sequence ,RNA, Messenger ,Protons ,Sequence Alignment ,Protein Binding - Abstract
The ribosomal protein L30 from yeast Saccharomyces cerevisiae auto-regulates its own synthesis by binding to a structural element in both its pre-mRNA and its mRNA. The three-dimensional structures of L30 in the free (f L30) and the pre-mRNA bound (b L30) forms have been solved by nuclear magnetic resonance spectroscopy. Both protein structures contain four alternating alpha-helices and four beta-strands segments and adopt an overall topology that is an alphabetaalpha three-layer sandwich, representing a unique fold. Three loops on one end of the alphabetaalpha sandwich have been mapped as the RNA binding site on the basis of structural comparison, chemical shift perturbation and the inter-molecular nuclear Overhauser effects to the RNA. The structural and dynamic comparison of f L30 and b L30 reveals that local dynamics may play an important role in the RNA binding. The fourth helix in b L30 is longer than in f L30, and is stabilized by RNA binding. The exposed hydrophobic surface that is buried upon RNA binding may provide the energy necessary to drive secondary structure formation, and may account for the increased stability of b L30.
- Published
- 1999
27. First Report of Philephedra tuberculosa (Hemiptera: Coccidae) in the United States Virgin Islands
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T. W. Zimmerman, R. A. Arancibia, J. R. Williamson, and Gregory S. Hodges
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biology ,Tuberculosa ,Ecology ,Insect Science ,Philephedra ,biology.organism_classification ,Hemiptera ,Ecology, Evolution, Behavior and Systematics ,Coccidae - Published
- 2008
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28. Role for nitric oxide in the hyperpermeability and hemodynamic changes induced by intravenous VEGF
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R G, Tilton, K C, Chang, W S, LeJeune, C C, Stephan, T A, Brock, and J R, Williamson
- Subjects
Male ,Vascular Endothelial Growth Factor A ,Lymphokines ,omega-N-Methylarginine ,Dose-Response Relationship, Drug ,Vascular Endothelial Growth Factors ,Hemodynamics ,Serum Albumin, Bovine ,Endothelial Growth Factors ,Eye ,Nitric Oxide ,Recombinant Proteins ,Rats ,Capillary Permeability ,Rats, Sprague-Dawley ,Drug Combinations ,Animals ,Endothelium, Vascular ,Enzyme Inhibitors ,Nitric Oxide Synthase ,Infusions, Intravenous - Abstract
To explore the effects of brief intravenous (IV) infusion of vascular endothelial growth factor (VEGF) on vascular albumin permeability, blood flow, and vascular conductance (blood flow normalized to arterial blood pressure) in ocular tissues and brain and to assess the role of nitric oxide in mediating these changes.A quantitative, double-tracer, radiolabeled albumin permeation method was combined with radiolabeled microspheres for assessment of changes in vascular permeability and blood flow, respectively, induced in ocular tissues by IV infusion of recombinant human VEGF165 for 20 minutes (80-450 picomoles/kg body weight). An inhibitor of nitric oxide synthase (NOS), NG-monomethyl-L-arginine (L-NMMA; 50 micromoles/kg body weight infused simultaneously with VEGF), was used to explore the role of nitric oxide in mediating the vascular changes induced by VEGF.Infusion of VEGF165 in thiopental-anesthetized rats dose-dependently increased 125I albumin permeation in the retina, anterior uvea, and choroid/sclera and in brain, aorta, lung, kidney, small intestine, and peripheral nerve. Mean arterial blood pressure, cardiac output, and stroke volume were decreased only at the highest dose of VEGF, whereas heart rate remained unchanged. Blood flow was increased in the anterior uvea, and vascular conductance was increased in retina, anterior uvea, choroid/sclera, and brain at the highest dose of VEGF. The NOS inhibitor, L-NMMA, blocked VEGF-induced vascular hyperpermeability in all ocular and nonocular tissues, prevented the increase in vascular conductance in all ocular tissues, and blocked the decrease in mean arterial blood pressure, cardiac output, and stroke volume. Infusion of L-NMMA alone decreased vascular conductance in choroid/sclera and kidney, slightly increased mean arterial blood pressure, and in general, did not affect 125I-albumin permeation. (L-NMMA slightly decreased albumin permeation in the retina and increased it in the brain.)Intravenous infusion of VEGF can acutely impair endothelial cell barrier functional integrity and relax resistance arterioles in ocular tissues and brain through a mechanism involving activation of NOS.
- Published
- 1999
29. Fast folding mutants of the Tetrahymena group I ribozyme reveal a rugged folding energy landscape
- Author
-
M S, Rook, D K, Treiber, and J R, Williamson
- Subjects
Protein Folding ,Base Sequence ,Molecular Sequence Data ,Temperature ,Nucleic Acid Hybridization ,Catalysis ,Kinetics ,Mutation ,Tetrahymena ,Animals ,Nucleic Acid Conformation ,Thermodynamics ,Urea ,RNA, Catalytic - Abstract
A model for the kinetic folding pathway of the Tetrahymena ribozyme has been proposed where the two main structural domains, P4-P6 and P3-P7, form in a hierarchical manner with P4-P6 forming first and P3-P7 folding on the minute timescale. Recent studies in our laboratory identified a set of mutations that accelerate P3-P7 formation, and all of these mutations appear to destabilize a native-like kinetic trap. To better understand the microscopic details of this slow step in the Tetrahymena ribozyme folding pathway, we have used a previously developed kinetic oligonucleotide hybridization assay to characterize the folding of several fast folding mutants. A comparison of the temperature dependence of P3-P7 folding between the mutant and wild-type ribozymes demonstrates that a majority of the mutations act by decreasing the activation enthalpy required to reach the transition state and supports the existence of the native-like kinetic trap. In several mutant ribozymes, P3-P7 folds with biphasic kinetics, indicating that only a subpopulation of molecules can evade the kinetic barrier. The rate of folding of the wild-type increases in the presence of urea, while for the mutants urea merely shifts the distribution between the two folding populations. Small structural changes or changes in solvent can accelerate folding, but these changes lead to complex folding behavior, and do not give rise to rapid two-state folding transitions. These results support the recent view of folding as an ensemble of molecules traversing a rugged energy landscape to reach the lowest energy state.
- Published
- 1998
30. Angiotensin II induces diverse signal transduction pathways via both Gq and Gi proteins in liver epithelial cells
- Author
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O M, Tsygankova, M, Peng, J A, Maloney, N, Hopkins, and J R, Williamson
- Subjects
Mitogen-Activated Protein Kinase Kinases ,Proto-Oncogene Proteins c-yes ,Angiotensin II ,MAP Kinase Kinase 1 ,Epithelial Cells ,Protein Serine-Threonine Kinases ,Protein-Tyrosine Kinases ,Proto-Oncogene Proteins c-fyn ,Cell Line ,Rats ,Enzyme Activation ,Proto-Oncogene Proteins c-raf ,src-Family Kinases ,Liver ,GTP-Binding Proteins ,Proto-Oncogene Proteins ,Animals ,Proto-Oncogene Proteins c-fos ,Signal Transduction - Abstract
Angiotensin II stimulates a biphasic activation of Raf-1, MEK, and ERK in WB liver epithelial cells. The first peak of activity is rapid and transient and is followed by a sustained phase. Angiotensin II also causes a rapid activation of p21ras in these cells. Moreover, two Src family kinases (Fyn and Yes) were activated by angiotensin II in a time- and concentration-dependent manner. Microinjection of antibodies against Fyn and Yes blocked angiotensin II-induced DNA synthesis and c-Fos expression in WB cells, indicating an obligatory involvement of these tyrosine kinases in the activation of the ERK cascade by angiotensin II. Finally, substantial reduction of the angiotensin II-stimulated activation of Fyn, Raf-1, ERK, and expression of c-Fos by pertussis toxin pretreatment argues that G proteins of the Gi family as well as the Gq family are involved in angiotensin II-mediated mitogenic pathways in WB cells.
- Published
- 1998
31. The Pumilio protein binds RNA through a conserved domain that defines a new class of RNA-binding proteins
- Author
-
P D, Zamore, J R, Williamson, and R, Lehmann
- Subjects
Sequence Homology, Amino Acid ,Recombinant Fusion Proteins ,Molecular Sequence Data ,RNA-Binding Proteins ,DNA-Binding Proteins ,Drosophila melanogaster ,Species Specificity ,Protein Biosynthesis ,Mutation ,Animals ,Drosophila Proteins ,Humans ,Insect Proteins ,Amino Acid Sequence ,RNA, Messenger ,Conserved Sequence ,Transcription Factors ,Research Article - Abstract
Translation of hunchback(mat) (hb[mat]) mRNA must be repressed in the posterior of the pre-blastoderm Drosophila embryo to permit formation of abdominal segments. This translational repression requires two copies of the Nanos Response Element (NRE), a 16-nt sequence in the hb[mat] 3' untranslated region. Translational repression also requires the action of two proteins: Pumilio (PUM), a sequence-specific RNA-binding protein; and Nanos, a protein that determines the location of repression. Binding of PUM to the NRE is thought to target hb(mat) mRNA for repression. Here, we show the RNA-binding domain of PUM to be an evolutionarily conserved, 334-amino acid region at the carboxy-terminus of the approximately 158-kDa PUM protein. This contiguous region of PUM retains the RNA-binding specificity of full-length PUM protein. Proteins with sequences homologous to the PUM RNA-binding domain are found in animals, plants, and fungi. The high degree of sequence conservation of the PUM RNA-binding domain in other far-flung species suggests that the domain is an ancient protein motif, and we show that conservation of sequence reflects conservation of function: that is, the homologous region from a human protein binds RNA with sequence specificity related to but distinct from Drosophila PUM.
- Published
- 1997
32. Hyperglycemic cytosolic reductive stress 'pseudohypoxia': implications for diabetic retinopathy
- Author
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Y, Ido and J R, Williamson
- Subjects
Cytosol ,Diabetic Retinopathy ,Stress, Physiological ,Hyperglycemia ,Animals ,Hypoxia ,Oxidation-Reduction ,Rats - Published
- 1997
33. Solution structure of the HIV-2 TAR-argininamide complex
- Author
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A S, Brodsky and J R, Williamson
- Subjects
Models, Molecular ,Transcriptional Activation ,Magnetic Resonance Spectroscopy ,Gene Products, tat ,HIV-2 ,Molecular Sequence Data ,Humans ,Nucleic Acid Conformation ,RNA, Viral ,tat Gene Products, Human Immunodeficiency Virus ,Arginine ,Protein Binding - Abstract
The trans-activating region (TAR) RNA-Tat protein interaction is important for activation of transciption in the human immunodeficiency virus (HIV). A model complex for this interaction composed of the two base bulge HIV-2 TAR and the amide derivative of arginine was studied by multidimensional heteronuclear NMR. Because of the improved spectral properties of the HIV-2 TAR complex, a larger number of NOEs in the bulge region were observed than in earlier studies of the HIV-1 TAR-argininamide complex. A total of 681 NOE distance restraints were collected and used to determine the solution structure of the HIV-2 TAR-argininamide complex. As observed in the previously proposed model from this lab, the two A-form stems co-axially stack and the critical U23 and the argininamide are located in the major groove. Model calculations including non-experimental restraints indicate that U23 is within hydrogen bonding distance to A27 consistent with the formation of a U x A x U base-triple. Base-triple formation helps open the major groove to increase the accessibility of G26 to hydrogen bond donors from the guanidinium group of argininamide. Argininamide binding is stabilized by stacking of the guanidinium group between the bases of A22 and U23, forming an argininamide sandwich.
- Published
- 1997
34. Slow folding kinetics of RNase P RNA
- Author
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P P, Zarrinkar, J, Wang, and J R, Williamson
- Subjects
Base Sequence ,Escherichia coli Proteins ,Molecular Sequence Data ,Ribonuclease H ,Nucleic Acid Hybridization ,Ribonuclease P ,Kinetics ,RNA, Bacterial ,Endoribonucleases ,Tetrahymena ,Escherichia coli ,Animals ,Nucleic Acid Conformation ,Magnesium ,RNA, Catalytic ,Oligonucleotide Probes ,RNA, Protozoan ,Bacillus subtilis ,Research Article - Abstract
Understanding the folding mechanisms of large, highly structured RNAs is important for understanding how these molecules carry out their function. Although models for the three-dimensional architecture of several large RNAs have been constructed, the process by which these structures are formed is only now beginning to be explored. The kinetic folding pathway of the Tetrahymena ribozyme involves multiple intermediates and both Mg2+-dependent and Mg2+-independent steps. To determine whether this general mechanism is representative of folding of other large RNAs, a study of RNase P RNA folding was undertaken. We show, using a kinetic oligonucleotide hybridization assay, that there is at least one slow step on the folding pathway of RNase P RNA, resulting in conformational changes in the P7 helix region on the minute timescale. Although this folding event requires the presence of Mg2+, the slow step itself does not involve Mg2+ binding. The P7 and P2 helix regions exhibit distinctly different folding behavior and ion dependence, implying that RNase P folding is likely to be a complex process. Furthermore, there are distinct similarities in the folding of RNase P RNA from both Bacillus subtilis and Escherichia coli, indicating that the folding pathway may also be conserved along with the final structure. The slow folding kinetics, Mg2+-independence of the rate, and existence of intermediates are basic features of the folding mechanism of the Tetrahymena group I intron that are also found in RNase P RNA, suggesting these may be general features of the folding of large RNAs.
- Published
- 1996
35. Endurance exercise training decreases capillary basement membrane width in older nondiabetic and diabetic adults
- Author
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Wendy M. Kohrt, O. Holloszy, R. J. Spina, P. L. Hoffmann, J. R. Williamson, and Andrew R. Coggan
- Subjects
Senescence ,Adult ,Male ,medicine.medical_specialty ,Aging ,Physiology ,Treadmill exercise ,Physical exercise ,Impaired glucose tolerance ,Endurance training ,Physiology (medical) ,Internal medicine ,Diabetes mellitus ,Glucose Intolerance ,Medicine ,Humans ,Muscle, Skeletal ,Exercise ,Aged ,Basement membrane ,business.industry ,Cell Membrane ,Age Factors ,Skeletal muscle ,Middle Aged ,medicine.disease ,Capillaries ,medicine.anatomical_structure ,Endocrinology ,Diabetes Mellitus, Type 2 ,Female ,business - Abstract
The objectives of these studies were to 1) evaluate the relationships among age, glucose intolerance, and skeletal muscle capillary basement membrane (CBM) width (CBMW) and 2) determine the effects of exercise training on CBMW by comparing values of young (28 +/- 4 yr) and older (63 +/- 7 yr) athletes with those of age-matched sedentary control subjects and by measuring CBMW in older men and women before and after a 9-mo endurance-exercise training program. CBMW was measured in tissue samples obtained from the gastrocnemius muscle. CBMW in sedentary 64 +/- 3-yr-old subjects was 25% thicker than in sedentary 24 +/- 3-yr-old subjects. CBMW was similar in young and older athletes and was thinner than the CBMW of age-matched sedentary control subjects. There were no differences in CBMW among older sedentary individuals with normal or impaired glucose tolerance or mild non-insulin-dependent diabetes mellitus. Nine months of endurance exercise training reduced CBMW in older men and women by 30-40%, to widths that were not different from those of the young subjects; this response was independent of glucose tolerance status. These findings suggest that habitual exercise prevents the thickening of the skeletal muscle CBM that is characteristic of advancing age. Moreover, the thickening of the CBM appears to be readily reversed as a result of exercise training, even in older individuals.
- Published
- 1996
36. Interaction of HIV Rev peptides with the Rev response element RNA
- Author
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J R, Williamson, J L, Battiste, H, Mao, and A D, Frankel
- Subjects
Binding Sites ,Magnetic Resonance Spectroscopy ,Base Sequence ,Molecular Structure ,Molecular Sequence Data ,HIV ,rev Gene Products, Human Immunodeficiency Virus ,Virus Replication ,Genes, env ,Models, Biological ,Protein Structure, Secondary ,Gene Products, rev ,Nucleic Acid Conformation ,RNA, Viral ,Protein Binding - Abstract
As a model system for understanding RNA-protein interactions, we are studying the structure of peptides derived from HIV Rev in complex with an RNA derived from the Rev Response Element (RRE) using NMR spectroscopy. Formation of the Rev peptide-RRE complex is accompanied by formation of two purine-purine base pairs in the RRE. These base pairs create an unusual geometry that widens the major groove of the RRE RNA. The Rev peptide is predominantly in an alpha-helical conformation in the complex. The specific recognition of the RRE by Rev involves widening of the major groove to accommodate the Rev alpha-helix.
- Published
- 1995
37. Preparation of isotopically enriched RNAs for heteronuclear NMR
- Author
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R T, Batey, J L, Battiste, and J R, Williamson
- Subjects
RNA, Bacterial ,Magnetic Resonance Spectroscopy ,Base Sequence ,Gram-Negative Aerobic Bacteria ,Transcription, Genetic ,Hydrolysis ,Isotope Labeling ,Deoxyribonucleotides ,Molecular Sequence Data ,Escherichia coli ,Ribonucleotides ,Chromatography, High Pressure Liquid ,Culture Media - Published
- 1995
38. Endotoxin-induced uveitis in the rat is attenuated by inhibition of nitric oxide production
- Author
-
R G, Tilton, K, Chang, J A, Corbett, T P, Misko, M G, Currie, N S, Bora, H J, Kaplan, and J R, Williamson
- Subjects
Male ,Nitrates ,Bacterial Toxins ,Hemodynamics ,Nitric Oxide ,Guanidines ,Rats ,Aqueous Humor ,Capillary Permeability ,Endotoxins ,Uveitis ,Leukocyte Count ,Rats, Inbred Lew ,Regional Blood Flow ,Salmonella ,Albumins ,Animals ,Amino Acid Oxidoreductases ,Nitric Oxide Synthase - Abstract
These experiments were undertaken to assess the role of increased nitric oxide production in the pathogenesis of vascular dysfunction associated with endotoxin-induced uveitis.Lipopolysaccharides (LPS) (100 micrograms of Salmonella minnesota) was injected into foot-pads of Lewis rats randomly assigned to an untreated group or to a group treated with subcutaneous injections of aminoguanidine, a selective inhibitor of the inducible isoform of nitric oxide synthase (iNOS). Controls included untreated and aminoguanidine-treated rats. Twenty to 24 hours later, blood flow and vascular 125I-albumin permeation were quantified in ocular tissues. Eyes were graded histologically for leukocyte infiltration into the anterior uvea and anterior chamber, and leukocyte counts were performed on aqueous fluid. Plasma nitrate levels were measured fluorometrically after enzymatic reduction to nitrite.Lipopolysaccharides markedly increased plasma nitrate levels and 125I-albumin permeation in aqueous fluid, retina, anterior uvea, and choroid-sclera. Blood flow was increased only in the anterior uvea. Aminoguanidine normalized plasma nitrate levels and prevented or significantly ameliorated the 125I-albumin permeation and blood flow changes in ocular tissues. The increased aqueous fluid content of lymphocytes and neutrophils in LPS-treated rats, as well as the increased histologic score of iritis, were significantly reduced by aminoguanidine.These results suggest that the hemodynamic and vascular permeability changes associated with endotoxin-induced uveitis are mediated in large part by increased production of nitric oxide.
- Published
- 1994
39. Epidermal growth factor-induced activation and translocation of phospholipase C-gamma 1 to the cytoskeleton in rat hepatocytes
- Author
-
L J, Yang, S G, Rhee, and J R, Williamson
- Subjects
Male ,Epidermal Growth Factor ,Biological Transport ,Actins ,Rats ,Enzyme Activation ,Isoenzymes ,Rats, Sprague-Dawley ,Liver ,GTP-Binding Proteins ,Type C Phospholipases ,Animals ,Tyrosine ,Phosphorylation ,Cells, Cultured ,Cytoskeleton - Abstract
In this study, we have examined the relationship between epidermal growth factor (EGF)-induced tyrosine phosphorylation of phospholipase C-gamma 1 (PLC-gamma 1) and its translocation from the cytosol to the Triton X-100-insoluble cytoskeleton fraction in rat hepatocytes. The translocation of PLC-gamma 1 was specific for EGF stimulation, because a similar effect was not observed with insulin or vasopressin. EGF caused a transient increase of PLC activity in the cytoskeleton fraction which could be abolished by immunoprecipitating PLC-gamma 1. Tyrosine phosphorylated PLC-gamma 1 was seen only in the cytoskeleton fraction, suggesting that tyrosine phosphorylation is required for PLC-gamma 1 translocation to the cytoskeleton. This process may involve binding of PLC-gamma 1 to actin filaments, since actin was immunoprecipitated together with PLC-gamma 1 in the cytoskeleton after EGF treatment. EGF-induced translocation of PLC-gamma 1 to the cytoskeleton was not inhibited by pertussis toxin, but Gi alpha was translocated in an EGF-dependent manner, suggesting that the interaction of PLC-gamma 1 with its activated Gi-protein is downstream from both PLC-gamma 1 tyrosine phosphorylation and its translocation to the cytoskeleton. Taken together, the present studies indicate that EGF-induced tyrosine phosphorylation of PLC-gamma 1, its association with the cytoskeleton, and its interaction with activated Gi alpha protein are all obligatory for PLC-gamma 1 activation in hepatocytes.
- Published
- 1994
40. Glomerulosclerosis in type 2 (non-insulin-dependent) diabetes mellitus: relationship to glycaemia in the University Group Diabetes Program (UGDP)
- Author
-
A M, Carpenter, F C, Goetz, P M, LeCompte, and J R, Williamson
- Subjects
Blood Glucose ,Diabetes Mellitus, Type 2 ,Creatinine ,Humans ,Blood Pressure ,Diabetic Nephropathies ,Autopsy ,Prospective Studies ,Vascular Diseases ,Middle Aged ,Kidney ,Diabetic Angiopathies ,United States - Abstract
Kidney tissue of acceptable quality was available from autopsies of 55 patients who had been followed prospectively for 3 to 15 years as participants in the University Group Diabetes Program, a study of vascular disease in Type 2 (non-insulin-dependent) diabetic patients. Slides were prepared for light microscopic reading by uniform histologic techniques, and then were randomly intermixed and coded with tissues identically prepared from matched non-diabetic subjects (morphologic controls). After independent review by three morphologists, the results were tabulated and assigned to one of four diagnostic groups: 1) typical diabetic nodular glomerulosclerosis; 2) mesangial changes suggestive of diabetes (diffuse lesion); 3) non-diabetic renal disease; 4) normal for age. Of the diabetic cases 31% (17 of 55) were found to show nodular glomerulosclerosis, and another 47% (26 of 55) showed suggestive changes; none of the morphologic control slides was read as showing nodular glomerulosclerosis, but some were judged to show suggestive mesangial (diffuse) changes. Although only 4 of the 17 diabetic patients with nodules had died of uraemia, many had hypertension, which may have contributed to their deaths from vascular disease. The patients with nodular glomerular changes also showed, on the average, the highest blood glucose levels during life. Type 2 diabetes in later life appears to be associated with a high risk for typical tissue changes of diabetic kidney damage, which may contribute significantly to morbidity and mortality and may be present before azotaemia and qualitative proteinuria have been recognized.
- Published
- 1993
41. Apoptosis induced by withdrawal of interleukin-3 (IL-3) from an IL-3-dependent hematopoietic cell line is associated with repartitioning of intracellular calcium and is blocked by enforced Bcl-2 oncoprotein production
- Author
-
G, Baffy, T, Miyashita, J R, Williamson, and J C, Reed
- Subjects
Kinetics ,Mice ,Proto-Oncogene Proteins c-bcl-2 ,Terpenes ,Proto-Oncogene Proteins ,Animals ,Thapsigargin ,Apoptosis ,Calcium ,Interleukin-3 ,Hematopoietic Stem Cells ,Cell Line ,Chelating Agents - Abstract
The regulation of intracellular pools of Ca2+ was investigated in an interleukin-3 (IL-3)-dependent hematopoietic cell line 32D that undergoes programmed cell death ("apoptosis") when deprived of lymphokine. Comparisons were made with 32D cells that had been stably transfected with a bcl-2 expression plasmid that encodes a 26-kDa intracellular integral-membrane protein known to abrogate apoptosis resulting from IL-3 withdrawal. Removal of IL-3 from cultures of 32D cells or control-transfected 32D-NEO cells for 1-2 days led to cell cycle arrest and oligonucleosomal DNA fragmentation and was associated with lower cytosolic free Ca2+ concentrations ([Ca2+]i), as measured by Indo-1 fluorescence of viable cells in Ca(2+)-containing media. In bcl-2-expressing 32D-BCL2 cells, IL-3 withdrawal also resulted in cessation of proliferation, but [Ca2+]i levels were not decreased and DNA fragmentation was markedly suppressed. Nonmitochondrial stores of Ca2+ were also significantly diminished in IL-3-deprived 32D-NEO but not in 32D-BCL2 cells, based on measurements of Ca2+ release into the cytosol following exposure of cells to thapsigargin (an inhibitor of endoplasmic reticulum Ca(2+)-ATPases) under Ca(2+)-free conditions. In contrast, estimates of mitochondrial Ca2+ stores using an uncoupler of oxidative phosphorylation 1799 (2,6-dihydroxy-1,1,1,7,7,7-he xafluoro-2,6-bis(trifluoromethyl)heptan-4-one[bis(he xafluoroacetonyl)]acetone) suggested that IL-3 deprivation leads to an increase in this intracellular pool of Ca2+ in 32D-NEO but not in 32D-BCL2 cells. Re-addition of IL-3 to factor-deprived 32D-NEO cells reversed the changes in thapsigargin- and 1799-releasable Ca2+ pools and rescued many of the cells from death. Measurements of total cellular Ca2+ revealed no difference in 32D-NEO cells before and after IL-3 withdrawal, suggesting that the observed alterations in mitochondrial and nonmitochondrial Ca2+ pools result from intracellular repartitioning of Ca2+. Treatment of IL-3-deprived 32D-NEO cells with Ca2+ ionophores blocked DNA fragmentation and prolonged cell survival, whereas addition of Ca2+ chelators to IL-3-stimulated 32D cells resulted in oligonucleosomal DNA fragmentation and cell death, suggesting that diminutions in the concentrations of Ca2+ in cytosol, endoplasmic reticulum, or other intracellular compartments either directly or indirectly regulate apoptosis in these lymphokine-dependent hematopoietic cells.
- Published
- 1993
42. Glucose and diabetic vascular disease
- Author
-
N B, Ruderman, J R, Williamson, and M, Brownlee
- Subjects
Diglycerides ,Glucose ,Hyperglycemia ,Animals ,Humans ,Sorbitol ,Diabetic Angiopathies ,Protein Kinase C ,Extracellular Matrix - Abstract
The central therapeutic problem in diabetes mellitus is prevention and treatment of the chronic vascular disease associated with this disorder. Prolonged exposure to hyperglycemia is the primary factor associated with the development of diabetes-specific microvascular disease, and the relationship between deranged glucose metabolism and arterial disease is complicated by many other factors that influence atherogenesis in nondiabetics. Until relatively recently, knowledge about diabetic vascular disease was limited mainly to clinical description. New information about abnormal vascular physiology, ultrastructure, biochemistry, cell biology, and molecular biology now makes it possible to understand in an integrated fashion the major specific mechanisms by which hyperglycemia damages diabetic vessels. Continued progress in this area will further optimize the development of safe and effective drugs for the treatment of diabetic vascular disease.
- Published
- 1992
43. Association of solubilized angiotensin II receptors with phospholipase C-alpha in murine neuroblastoma NIE-115 cells
- Author
-
S J, Mah, A M, Ades, R, Mir, I R, Siemens, J R, Williamson, and S J, Fluharty
- Subjects
Receptors, Angiotensin ,Angiotensin II ,Blotting, Western ,Cell Membrane ,Antibodies, Monoclonal ,Cholic Acids ,Precipitin Tests ,Iodine Radioisotopes ,Isoenzymes ,Angiotensin Receptor Antagonists ,Mice ,Neuroblastoma ,Type C Phospholipases ,Chromatography, Gel ,Tumor Cells, Cultured ,Animals - Abstract
The peptide angiotensin II (AngII) has been reported to stimulate phosphoinositide-specific phospholipase C (PLC) activity in the murine neuroblastoma cell line N1E-115. In the present study, polyclonal antibodies raised against a PLC isoenzyme, PLC-alpha, reacted with a 60-kDa protein present in both membrane and cytosolic fractions of differentiated N1E-115 cells. In order to examine the possible association of PLC-alpha with cell surface AngII receptors (AngII-Rs), membranes from differentiated N1E-115 cells were solubilized, using the zwitterionic detergent 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS). CHAPS (1%) solubilized AngII-Rs, from N1E-115 cells, that maintained their high affinity for agonists. Gel filtration analysis of the solubilized membranes revealed that the majority of the specific binding of 125I-AngII eluted as a large protein complex with a molecular mass of 380 kDa and that agonist binding was partially reduced by guanosine-5'-O-(3-thio)triphosphate (GTP gamma S), within this complex. CHAPS also effectively solubilized immunoreactive PLC-alpha, from N1E-115 cell membranes, that was similarly present within the 380-kDa AngII-binding complex. Anti-PLC-alpha antisera immunoprecipitated approximately 16% of the total phosphatidylinositol-4,5-bisphosphate-specific PLC activity in the 1% CHAPS extract and 40% of cytosolic PLC activity. Moreover, a 60-kDa 35S-Trans S-labeled protein, comigrating with immunoreactive PLC-alpha, was immunoprecipitated from the 1% CHAPS extract by the antisera. In addition, anti-PLC-alpha antisera immunoprecipitated approximately 20% of solubilized AngII-Rs prebound with 125I-AngII but failed to precipitate receptors prebound with the antagonist 125I-Sarc1,Ile8-AngII. The anti-PLC-alpha antisera also immunoprecipitated AngII-Rs when intact membranes were labeled with 125I-AngII before solubilization in 1% CHAPS, suggesting that the AngII-R interaction with PLC-alpha was not the result of detergent-promoted protein-protein interaction. On the other hand, monoclonal antibodies against another PLC isozyme, PLC-gamma, did not precipitate AngII-Rs in solubilized N1E-115 membranes. Finally, the formation of the immunoprecipitated AngII-R-PLC-alpha complex was disrupted by the nonhydrolyzable guanine nucleotide analog GTP gamma S, suggesting that the interaction between AngII-Rs and PLC-alpha is likely to involve a heterotrimeric guanine nucleotide-binding protein in neuron-like cells.
- Published
- 1992
44. Mast cell granules within endothelial cells: a possible signal in the inflammatory process?
- Author
-
K, DeSchryver-Kecskemeti, J R, Williamson, B A, Jakschik, R E, Clouse, and D H, Alpers
- Subjects
Adult ,Inflammation ,Male ,Colon ,Colitis ,Cytoplasmic Granules ,Cell Degranulation ,Capillaries ,Rats ,Microscopy, Electron ,Animals ,Humans ,Endothelium, Vascular ,Mast Cells - Abstract
Mast cell-endothelial cell interactions have long been suspected to be important in inflammation. The detail of the pathways of communication have yet to be elucidated. In this report we describe, for the first time, mast cell granules within endothelial cells of colonic capillaries in a patient with florid colitis, as well as rats with experimentally induced mast cell degranulation. We postulate that this phenomenon may occur more generally during immunologically mediated inflammatory cell degranulation, and may be one mechanism of communication to endothelium.
- Published
- 1992
45. Hyperglycemia, Diabetes, and Vascular Disease
- Author
-
Neil B. Ruderman, Michael Brownlee, and J. R. Williamson
- Subjects
medicine.medical_specialty ,Vascular disease ,business.industry ,Disease ,Bioinformatics ,medicine.disease ,Pathogenesis ,Endocrinology ,Internal medicine ,Diabetes mellitus ,Epidemiology ,medicine ,Vascular structure ,business - Abstract
This study examines the link between hyperglycaemia and micro-and macro-vascular disease in diabetes. The authors review clinical, biochemical and epidemiological evidence that high levels of blood glucose produce metabolic and biochemical alterations in vascular walls. These alterations in turn lead to abnormalities in vascular structure and function. Although there are differences in the pathogenesis of these types of vascular diseases, the text emphasizes the common effects of hyperglycaemia on vascular metabolism, function and disease. The book is based on a symposium of the American Physiological Society.
- Published
- 1992
- Full Text
- View/download PDF
46. The roles of glucose-induced metabolic hypoxia and imbalances in carnitine metabolism in mediating diabetes-induced vascular dysfunction
- Author
-
J R, Williamson and E, Arrigoni-Martelli
- Subjects
Blood Glucose ,Carnitine ,Animals ,Humans ,NAD ,Cell Hypoxia ,Diabetic Angiopathies - Abstract
Investigations were initiated to examine the rate of imbalances in carnitine metabolism in the pathogenesis of diabetic vascular changes in the retina, peripheral nerves, aorta and kidney. It appears that glucose/diabetes-induced vascular dysfunction and early vascular structural changes are mediated by hyperglycaemic hypoxia i.e. glucose-induced metabolic imbalances that cause an increase in the reduced nicotinamide-adenine dinucleotide/nicotinic acid dehydrogenase ratio, and are linked to imbalances in carnitine metabolism.
- Published
- 1992
47. Pertussis toxin-sensitive Gi protein involvement in epidermal growth factor-induced activation of phospholipase C-gamma in rat hepatocytes
- Author
-
L J, Yang, G, Baffy, S G, Rhee, D, Manning, C A, Hansen, and J R, Williamson
- Subjects
Male ,Adenosine Diphosphate Ribose ,Epidermal Growth Factor ,Rats, Inbred Strains ,Protein-Tyrosine Kinases ,Rats ,Enzyme Activation ,ErbB Receptors ,Kinetics ,Cytosol ,Liver ,Pertussis Toxin ,GTP-Binding Proteins ,Reference Values ,Type C Phospholipases ,Animals ,Calcium ,Virulence Factors, Bordetella ,Cells, Cultured - Abstract
Treatment of rat hepatocytes with epidermal growth factor (EGF) produced an enhanced tyrosine phosphorylation of the EGF receptor and phospholipase C-gamma (PLC-gamma) in conjunction with the mobilization of Ca2+. Approximately 30% of the total PLC-gamma was tyrosine-phosphorylated with a maximum being reached after 30 s of incubation with EGF. Pretreatment of the rats with pertussis toxin prior to isolation of the hepatocytes blocked EGF-induced tyrosine phosphorylation of PLC-gamma and Ca2+ mobilization but had no effect on autophosphorylation of the EGF receptor or Ca2+ responses elicited by angiotensin II or phenylephrine. Under these conditions Gi protein alpha subunits were fully ADP-ribosylated. A 41-kDa Gi protein alpha subunit was found to be present in the anti-PLC-gamma immune complex after EGF stimulation as shown by in vitro ADP-ribosylation using [32P]NAD+ and activated pertussis toxin. The kinetics of association between PLC-gamma with Gi alpha protein reached a maximum after 1 min of incubation with EGF. Antibodies specific for the EGF receptor also coimmunoprecipitated a Gi protein alpha subunit. Treatment of hepatocytes with EGF caused first an increase and then a decrease in the amount of Gi protein alpha subunit associated with the EGF receptor. In contrast, studies with cultured rat liver (WB) cells, a cell line in which EGF stimulation of phosphoinositide hydrolysis is not inhibited by pertussis toxin, showed that a stable complex of Gi alpha was not formed with either PLC-gamma or EGF receptor immunoprecipitates. These results indicate that a pertussis toxin-sensitive Gi protein is uniquely involved in the signal transduction pathway mediating EGF-induced activation of PLC-gamma and Ca2+ mobilization in hepatocytes.
- Published
- 1991
48. Mechanisms of receptor-mediated Ca2+ signaling in rat hepatocytes
- Author
-
C A, Hansen, L J, Yang, and J R, Williamson
- Subjects
Male ,Microinjections ,Inositol Phosphates ,Rats, Inbred Strains ,Receptors, Cell Surface ,Rats ,Kinetics ,Phenylephrine ,Cytosol ,Liver ,Guanosine 5'-O-(3-Thiotriphosphate) ,Animals ,Cells, Cultured ,Signal Transduction - Abstract
The Ca2+ signal observed in individual fura-2-loaded hepatocytes stimulated with the alpha 1-adrenergic agonist phenylephrine consisted of a variable latency period, a rapid biphasic increase in the cytosolic free Ca2+, followed by a period of maintained elevated cytosolic Ca2+ (plateau phase) that depended on the continued presence of both agonist and external Ca2+. Microinjection of guanosine-5'-O-(3-thiophosphate) elicited a Ca2+ transient with the same basic features. The Ca2+ transient resulting from microinjecting inositol 1,4,5-trisphosphate (Ins-1,4,5-P3) occurred with essentially no latency period and consisted of a rapid spike that decayed back to preinjection levels within 15 s. Microinjection of inositol 1,4,5-trisphosphorothioate (thio-IP3), a nonmetabolizable analog of Ins-1,4,5-P3, elicited a Ca2+ transient that was initially identical to that observed with Ins-1,4,5-P3, except that the cytosolic Ca2+ remained elevated. The maintained thio-IP3-induced Ca2+ increase was dependent on the presence of external Ca2+, suggesting an activation of Ca2+ influx. Reintroduction of external Ca2+ in the presence of 5 microM phenylephrine to Ca(2+)-depleted cells resulted in a 2-fold greater rate of rise in the cytosolic Ca2+ compared to the rate observed upon Ca2+ addition to cells Ca(2+)-depleted by preatement with thapsigargin. The rate of Ca2+ rise upon Ca2+ addition to cells microinjected with thio-IP3 was similar to that observed with phenylephrine. Coinjection of the cells with thio-IP3 plus heparin reduced the rate of Ca2+ rise upon Ca2+ addition to that observed in thapsigargin-treated cells. These data indicate that the mechanism responsible for receptor-mediated stimulation of Ca2+ entry into hepatocytes involves not only capacitative Ca2+ entry but also an additional component mediated directly by Ins-1,4,5-P3.
- Published
- 1991
49. Calcium and the malaria parasite: parasite maturation and the loss of red cell deformability
- Author
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D J, Krogstad, S P, Sutera, J S, Marvel, I Y, Gluzman, C W, Boylan, J R, Colca, J R, Williamson, and P H, Schlesinger
- Subjects
Cytoskeletal Proteins ,Erythrocytes ,Calcium Radioisotopes ,Erythrocyte Deformability ,Plasmodium falciparum ,Animals ,Humans ,Calcium ,Egtazic Acid ,Calcimycin - Abstract
In the studies reported here, we examined the role of calcium in the maturation of the human malaria parasite Plasmodium falciparum, and in the loss of red cell deformability associated with parasite maturation. P. falciparum alters the permeability of its host red cell, which normally maintains submicromolar cytoplasmic concentrations of calcium. Infection of the red cell and parasite maturation produce a 30-fold increase in calcium uptake. Both parasite maturation and the loss of red cell deformability are blocked by EGTA (by extracellular-free calcium concentrations less than or equal to 35 microM) and by other calcium antagonists. The loss of red cell deformability that occurs with parasite maturation is accompanied by alterations in the cytoskeletal proteins of parasitized red cells similar to those produced by the calcium ionophore A23187 (reductions in bands 2.1 [ankyrin], 4.1, and 5 [actin]). These results establish that parasite development and the loss of red cell deformability are calcium-dependent. They suggest that parasite-induced changes in the calcium permeability of the red cell activate endogenous transglutaminase activity by raising the free calcium concentration of the red cell cytoplasm.
- Published
- 1991
50. Accurate determination of mean cell volume by isotope dilution in erythrocyte populations with variable deformability
- Author
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J S, Marvel, S P, Sutera, D J, Krogstad, H S, Zarkowsky, and J R, Williamson
- Subjects
Erythrocyte Indices ,Radioisotope Dilution Technique ,Sheep ,Genetic Variation ,Serum Albumin, Bovine ,Anemia, Sickle Cell ,Microspheres ,Rats ,Iodine Radioisotopes ,Reference Values ,Erythrocyte Deformability ,Animals ,Humans ,Cattle ,Rabbits ,Cobalt Radioisotopes ,Rheology ,Edetic Acid - Abstract
Variations in erythrocyte deformability and morphology lead to artifacts in electronic determinations of mean cellular volume (MCV) by the aperture-impedance method. The micropipette-aspiration technique loses accuracy when applied to severely aberrant cells such as dense sickle cells. A new light-scattering technique requires that the cells be capable of undergoing isovolumetric sphering. In contrast, the isotope-dilution (ID) method measures absolute mean volume and is free of artifacts associated with abnormal deformability or morphology. It does not depend on any algorithms or correction factors and does not subject the cells to any stringent processing, not even centrifugation. The ID method can be used to determine the mean volume of red cells in hypo- or hypertonic media or in the presence of pharmacologic agents. It requires no more than a 1-ml aliquot of suspended cells at a hematocrit of at least 30%. The cells can be readily recovered, washed, and reused. Using EDTA labeled with 57Co as an extracellular space marker we have used ID to determine the MCV of fractionated normal human red blood cells (RBC), unfractionated RBC containing SS hemoglobin, and RBC from four other mammalian species. In the case of human RBC obtained from eight normal donors, we obtained mean MCV values (+/- SD) of 83.6 +/- 3.0, 87.5 +/- 3.9, and 76.5 +/- 5.3 fl for unfractionated and top and bottom 10% density fractions, respectively. The value 83.6 is significantly lower than the generally accepted range of 89-91 indicated by electronic analyzers calibrated against spun microhematocrits. The discrepancy of about 7% can account for the difference between mean cell hemoglobin concentration (MCHC) data determined by a calibrated Coulter Counter and corresponding data obtained with paired samples using a cyanmethemoglobin procedure specified in NCCLS Standard H15-A and corrected for trapped plasma.
- Published
- 1991
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