13 results on '"Iwura T"'
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2. Intermolecular interactions and conformation of antibody dimers present in IgG1 biopharmaceuticals
- Author
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Iwura, T., Fukuda, J., Yamazaki, K., Kanamaru, Shuji, and Arisaka, F.
- Subjects
Stereochemistry ,Protein Conformation ,Proteolysis ,Dimer ,Sodium ,chemistry.chemical_element ,Mass spectrometry ,Biochemistry ,Antibodies ,Fluorescence ,Mass Spectrometry ,chemistry.chemical_compound ,medicine ,Thermal stability ,Molecular Biology ,medicine.diagnostic_test ,Circular Dichroism ,Intermolecular force ,General Medicine ,Crystallography ,Monomer ,chemistry ,Covalent bond ,Immunoglobulin G ,Chromatography, Gel ,Electrophoresis, Polyacrylamide Gel ,Dimerization ,Ultracentrifugation - Abstract
Intermolecular interactions and conformation in dimer species of Palivizumab, a monoclonal antibody (IgG1), were investigated to elucidate the physical and chemical properties of the dimerized antibody. Palivizumab solution contains ∼1% dimer and 99% monomer. The dimer species was isolated by size-exclusion chromatography and analysed by a number of methods including analytical ultracentrifugation-sedimantetion velocity (AUC-SV). AUC-SV in the presence of sodium dodecyl sulphate indicated that approximately half of the dimer fraction was non-covalently associated, whereas the other half was dimerized by covalent bond. Disulphide bond and dityrosine formation were likely to be involved in the covalent dimerization. Limited proteolysis of the isolated dimer by Lys-C and mass spectrometry for the resultant products indicated that the dimer species were formed by Fab-Fc or Fab-Fab interactions, whereas Fc-Fc interactions were not found. It is thus likely that the dimerization occurs mainly via the Fab region. With regard to the conformation of the dimer species, the secondary and tertiary structures were shown to be almost identical to those of the monomer. Furthermore, the thermal stability turned out also to be very similar between the dimer and monomer.
- Published
- 2014
3. 3P046 Effect of the Ionic Strength on the Thermal Unfolding Process of Granulocyte-Colony Stimulating Factor(G-CSF)
- Author
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Yamazaki, K., primary, Iwura, T., additional, Ishikawa, R., additional, and Ozaki, Y., additional
- Published
- 2004
- Full Text
- View/download PDF
4. Physicochemical analysis and biological characterization of FKB327 as a biosimilar to adalimumab.
- Author
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Schreiber S, Yamamoto K, Muniz R, and Iwura T
- Subjects
- Adalimumab chemistry, Adalimumab pharmacology, Animals, Antirheumatic Agents chemistry, Antirheumatic Agents pharmacology, Apoptosis drug effects, Biosimilar Pharmaceuticals chemistry, Biosimilar Pharmaceuticals pharmacology, Cell Line, Chemistry Techniques, Analytical, Humans, Peptide Mapping, Tumor Necrosis Factor-alpha antagonists & inhibitors, Adalimumab administration & dosage, Antirheumatic Agents administration & dosage, Biosimilar Pharmaceuticals administration & dosage
- Abstract
FKB327 was approved by the European Medicines Agency as a biosimilar to European-authorized adalimumab (Humira
® ; AbbVie Inc). Adalimumab is a monoclonal antibody, binding and inhibiting tumor necrosis factor (TNF)-α with use indicated for several immune-mediated, chronic, and inflammatory disorders. The approval is based on high similarity in the physicochemical properties between FKB327 and adalimumab. The objective of this study is to assess the biological similarity, with regard to Fab- and Fc-associated functions, and describe the relationship between physicochemical and biological characterization and functional activity. State-of-the-art orthogonal techniques were implemented to assess the structure and function of FKB327. Peptide mapping with liquid chromatography and mass spectrometry, capillary electrophoresis-sodium dodecyl sulfate, ultraviolet circular dichroism, size-exclusion high-performance liquid chromatography (HPLC), and cation exchange HPLC were the techniques used to assess structure. Functional activity was assessed with enzyme-linked immunosorbent assay, surface plasmon resonance, and cell-based assays. The polypeptide sequence of FKB327 was identical to that of adalimumab. FKB327 also was demonstrated to have a similar secondary and tertiary structure to adalimumab. Posttranslational heterogeneities, along with size and charge variants, were not clinically meaningful. FKB327 binds to TNF-α, FcγR, the neonatal Fc receptor, and C1q, and induces apoptosis, antibody-dependent cellular cytotoxicity, and complement-dependent cytotoxicity. The binding and activity of FKB327 were similar to that of adalimumab. FKB327 shares similar structure and activity with adalimumab. Based on characterization of physicochemical and biological properties, FKB327 is expected to have a similar safety, immunogenicity, and efficacy profile to adalimumab., (© 2020 The Authors. Pharmacology Research & Perspectives published by John Wiley & Sons Ltd, British Pharmacological Society and American Society for Pharmacology and Experimental Therapeutics.)- Published
- 2020
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5. Recent Achievements and Current Interests in Research on the Characterization and Quality Control of Biopharmaceuticals in Japan.
- Author
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Ishii-Watabe A, Shibata H, Suetomo H, Ikeda Y, Telikepalli S, Kiyoshi M, Hayashi Y, Muto T, Tanaka Y, Ueda S, Iwura T, Saitoh S, Aoyama M, Harazono A, Hyuga M, Goda Y, Torisu T, and Uchiyama S
- Subjects
- Biological Assay, Biological Factors, Japan, Particle Size, Quality Control, Biological Products
- Abstract
As reported in the previous commentary (Ishii-Watabe et al., J Pharm Sci 2017), the Japanese biopharmaceutical research group is promoting collaborative multilaboratory studies to evaluate and standardize new methodologies for biopharmaceutical characterization and quality control. We have conducted the studies and held 2 annual meetings in 2018 and 2019. At the 2018 meeting, Dr. Rukman DeSilva of the U.S. Food and Drug Administration and Dr. Srivalli Telikepalli of the National Institute of Standards and Technology participated as guest speakers. At the 2019 meeting, we invited Prof. John Carpenter of the University of Colorado, Prof. Gerhard Winter and Prof. Wolfgang Friess of Ludwig Maximilian University of Munich, and Dr. Tim Menzen of Coriolis Pharma Research, as guest commentators. In both meetings, the main research topic was strategies for the characterization and control of protein aggregates/subvisible particles in drug products. Specifically, the use of the light obscuration method for insoluble particulate matter testing with reduced injection volumes, and a comparison of analytical performance between flow imaging and light obscuration were discussed. Other topics addressed included host cell protein analysis, bioassay, and quality control strategies. In this commentary, the recent achievements of the research group, meeting discussions, and future perspectives are summarized., (Copyright © 2020. Published by Elsevier Inc.)
- Published
- 2020
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6. Collaborative Study for Analysis of Subvisible Particles Using Flow Imaging and Light Obscuration: Experiences in Japanese Biopharmaceutical Consortium.
- Author
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Kiyoshi M, Shibata H, Harazono A, Torisu T, Maruno T, Akimaru M, Asano Y, Hirokawa M, Ikemoto K, Itakura Y, Iwura T, Kikitsu A, Kumagai T, Mori N, Murase H, Nishimura H, Oda A, Ogawa T, Ojima T, Okabe S, Saito S, Saitoh S, Suetomo H, Takegami K, Takeuchi M, Yasukawa H, Uchiyama S, and Ishii-Watabe A
- Subjects
- Japan, Light, Optical Imaging, Particle Size, Technology, Pharmaceutical, Immunoglobulins, Intravenous chemistry, Protein Aggregates
- Abstract
The evaluation of subvisible particles, including protein aggregates, in therapeutic protein products has been of great interest for both pharmaceutical manufacturers and regulatory agencies. To date, the flow imaging (FI) method has emerged as a powerful tool instead of light obscuration (LO) due to the fact that (1) protein aggregates contain highly transparent particles and thereby escape detection by LO and (2) FI provides detailed morphological characteristics of subvisible particles. However, the FI method has not yet been standardized nor listed in any compendium. In an attempt to assess the applicability of the standardization of the FI method, we conducted a collaborative study using FI and LO instruments in a Japanese biopharmaceutical consortium. Three types of subvisible particle preparations were shared across 12 laboratories and analyzed for their sizes and counts. The results were compared between the methods (FI and LO), inter-laboratories, and inter-instruments (Micro Flow Imaging and FlowCam). We clarified the marked difference between the detectability of FI and LO when counting highly transparent protein aggregates in the preparations. Although FlowCam provided a relatively higher number of particles compared with MFI, consistent results were obtained using the instrument from the same manufacturer in all 3 samples., (Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2019
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7. Recent Topics of Research in the Characterization and Quality Control of Biopharmaceuticals in Japan.
- Author
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Ishii-Watabe A, Shibata H, Harazono A, Hyuga M, Kiyoshi M, Saitoh S, Iwura T, Torisu T, Goda Y, and Uchiyama S
- Subjects
- Biological Assay methods, Biotechnology methods, Humans, Japan, Polysaccharides chemistry, Proteins chemistry, Quality Control, Research, Technology, Pharmaceutical standards, Biological Factors chemistry, Biopharmaceutics standards, Drug Industry standards
- Abstract
The research and development of next-generation innovative medicines is a prominent interest of both the government and industries in Japan. On June 29, 2017, a kickoff meeting of a new research group focused on the quality issues of biopharmaceuticals was held in Tokyo with Prof. John Carpenter as an invited guest. The group's research focuses mainly on the evaluation and control of protein aggregates/subvisible particles in drug products, but the research topics also include glycan analysis, host-cell protein evaluation, bioassay validation, and analytical quality by design. The purpose of the group's activities is to resolve the critical and fundamental quality issues important to pharmaceutical companies through the collaboration of industries, academia, and regulatory agencies. In this commentary, our current plan to address these issues and the discussion at the kickoff meeting are described., (Copyright © 2017 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.)
- Published
- 2017
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8. Factors to Govern Soluble and Insoluble Aggregate-formation in Monoclonal Antibodies.
- Author
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Fukuda J, Iwura T, Yanagihara S, and Kano K
- Subjects
- Biopharmaceutics instrumentation, Calorimetry, Differential Scanning, Chemistry, Pharmaceutical, Chromatography, Gel, Dynamic Light Scattering, Hot Temperature, Models, Theoretical, Multivariate Analysis, Protein Binding, Protein Conformation, Protein Stability, Solubility, Spectrometry, Fluorescence, Antibodies, Monoclonal chemistry, Biopharmaceutics methods, Immunoglobulin G chemistry, Protein Multimerization
- Abstract
The aggregation formation of monoclonal antibodies as biopharmaceuticals induced by heat stress was evaluated by size-exclusion chromatography, and the formation rate was correlated with several physicochemical parameters of the antibodies to clarify the factors to govern the aggregate formation. The parameters we studied were: the melting temperature (Tm) and the standard enthalpy of the melting point (ΔmH°) evaluated by differential scanning calorimetry under given and common conditions; the wavelength (λmax) and the intensity (Fint) of the maximum fluorescence peak of 1-anilinonaphthalene-8-sulfonate as a probe dye; the z-average diameter (D) evaluated by dynamic light scattering; and the isoelectric point (pI) and the hydrophobic index (Hpho) of the complementarity determining region calculated from the amino acid sequence. Multivariate statistical analysis with these explanatory variables based on Akaike's information criterion indicates that the soluble aggregate formation is negatively correlated with Tm and pI, while the insoluble aggregate formation is positively correlated with Fint and pI. Based on these results, the mechanisms of the aggregate formation and methods to prevent the formation are discussed.
- Published
- 2015
- Full Text
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9. Conformational stability, reversibility and heat-induced aggregation of α-1-acid glycoprotein.
- Author
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Iwura T, Fukuda J, Yamazaki K, and Arisaka F
- Subjects
- Calorimetry, Differential Scanning, Chromatography, Gel, Circular Dichroism, Electrophoresis, Polyacrylamide Gel, Hot Temperature, Protein Aggregates, Protein Denaturation, Transition Temperature, Orosomucoid chemistry, Protein Conformation, Protein Stability
- Abstract
To investigate the relationship between conformational stability, reversibility of denaturation and aggregation of protein, we determined the conformation, melting temperature (Tm), and reversibility of heat-induced denaturation of α-1-acid glycoprotein (AGP) in aqueous solutions at various pH values using circular dichroism (CD) and differential scanning microcalorimetry. To quantitate and characterize heat-induced AGP aggregation under the same pH conditions, solutions of AGP were incubated at 50°C and then analysed by size exclusion chromatography (SEC), sodium dodecyl sulfate-polyacrylamide gel electrophoresis, CD and SEC in the presence of 4,4'-dianilino-1,1'-binaphthyl-5,5'-disulfonic acid. The conformational stability of AGP was reduced at lower pH, whereas the reversibility of protein denaturation was reduced at higher pH. AGP formed some large non-covalent aggregates during incubation at lower pH, whereas incubation at higher pH tended to cause the formation of dimer species without the formation of large aggregates. These results indicated that lower conformational stability was related to the formation of non-covalent large aggregates, whereas reduced reversibility was related to dimer formation. Thus, evaluating both conformational stability and reversibility is necessary for developing optimal formulations and to predict the kinds of aggregates that will be induced during protein storage., (© The Authors 2014. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.)
- Published
- 2014
- Full Text
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10. Separation and quantification of monoclonal-antibody aggregates by hollow-fiber-flow field-flow fractionation.
- Author
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Fukuda J, Iwura T, Yanagihara S, and Kano K
- Subjects
- Fractionation, Field Flow instrumentation, Hot Temperature, Antibodies, Monoclonal chemistry, Antibodies, Monoclonal isolation & purification, Fractionation, Field Flow methods, Protein Aggregates
- Abstract
Hollow-fiber-flow field-flow fractionation (HF5) separates protein molecules on the basis of the difference in the diffusion coefficient, and can evaluate the aggregation ratio of proteins. However, HF5 is still a minor technique because information on the separation conditions is limited. We examined in detail the effect of different settings, including the main-flow rate, the cross-flow rate, the focus point, the injection amount, and the ionic strength of the mobile phase, on fractographic characteristics. On the basis of the results, we proposed optimized conditions of the HF5 method for quantification of monoclonal antibody in sample solutions. The HF5 method was qualified regarding the precision, accuracy, linearity of the main peak, and quantitation limit. In addition, the HF5 method was applied to non-heated Mab A and heat-induced-antibody-aggregate-containing samples to evaluate the aggregation ratio and the distribution extent. The separation performance was comparable with or better than that of conventional methods including analytical ultracentrifugation-sedimentation velocity and asymmetric-flow field-flow fractionation.
- Published
- 2014
- Full Text
- View/download PDF
11. Methanol-induced tertiary and secondary structure changes of granulocyte-colony stimulating factor.
- Author
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Yamazaki K, Iwura T, Ishikawa R, and Ozaki Y
- Subjects
- Anilino Naphthalenesulfonates chemistry, Circular Dichroism, Dose-Response Relationship, Drug, Filgrastim, Hot Temperature, Methanol administration & dosage, Protein Denaturation, Protein Structure, Secondary drug effects, Protein Structure, Tertiary drug effects, Recombinant Proteins, Spectrometry, Fluorescence, Spectrophotometry, Infrared, Granulocyte Colony-Stimulating Factor chemistry, Methanol pharmacology
- Abstract
We have studied methanol-induced conformational changes in rmethuG-CSF at pH 2.5 by means of circular dichroism (CD), fluorescence and infrared (IR) spectroscopy, and 8-anilino-1-naphthalene sulfonic acid (ANS) binding. Methanol has little effect on the secondary and tertiary structures of rmethuG-CSF when its concentration is in the range of 0 to 20% (v/v). At 30% (v/v) methanol, rmethuG-CSF has ANS binding ability. In the methanol concentration range of 30 to 70% (v/v) the amount of alpha-helix decreases a little, and the tertiary structure decreases significantly. At methanol concentrations above 70% (v/v), a transition to a more helical state occurs, while there is little change in the tertiary structure, and no ANS binding ability. Thermal denaturation studies involving CD have demonstrated that as the methanol concentration increases the melting temperature and the cooperativity of transition decrease, and the transition covers a much wider range of temperature. It seems that the decreased cooperativity means an increase in the concentration of partially folded intermediate states during the unfolding of rmethuG-CSF.
- Published
- 2006
- Full Text
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12. Effects of ionic strength on the thermal unfolding process of granulocyte-colony stimulating factor.
- Author
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Yamazaki K, Iwura T, Ishikawa R, and Ozaki Y
- Subjects
- Circular Dichroism, Filgrastim, Granulocyte Colony-Stimulating Factor chemistry, Humans, Recombinant Proteins, Spectrophotometry, Ultraviolet, Spectroscopy, Fourier Transform Infrared, Static Electricity, Granulocyte Colony-Stimulating Factor metabolism, Osmolar Concentration, Protein Denaturation
- Abstract
This paper reports the effect of ionic strength on the process of thermal unfolding of recombinant methionyl human granulocyte-colony stimulating factor (rmethuG-CSF) at acid pH. We previously reported that the protein aggregates were formed at the highest temperature at pD 2.1 in the pD range of 5.5-2.1 and that the aggregation proceeded a little at pD 2.1 because of the strong repulsive interaction between the unordered structures that play the role of a precursor for the aggregation. In the present study temperature-dependent IR spectra and far-UV CD spectra were measured for rmethuG-CSF in aqueous solutions containing various concentrations of NaCl at acid pH. Second derivative and curve-fitting analysis were performed to examine the obtained IR spectra. The results revealed that the structure of rmethuG-CSF becomes less stable with increasing ionic strength at all pDs investigated (pD 2.1, 2.5, and 4.0). We have also demonstrated that, at pD 2.1, the temperature at which the protein aggregation starts becomes lower and that the amount of the aggregates becomes larger with the addition of NaCl. This is probably because the addition of NaCl masks the repulsive electrostatic interaction between the unordered structures.
- Published
- 2006
- Full Text
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13. Determination of the secondary structure in solution of the Escherichia coli DnaA DNA-binding domain.
- Author
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Obita T, Iwura T, Su'etsugu M, Yoshida Y, Tanaka Y, Katayama T, Ueda T, and Imoto T
- Subjects
- Amino Acid Sequence, Bacterial Proteins metabolism, Chromatography, Gel, Circular Dichroism, DNA-Binding Proteins metabolism, Dose-Response Relationship, Drug, Magnetic Resonance Spectroscopy, Molecular Sequence Data, Mutation, Protein Binding, Protein Folding, Protein Structure, Secondary, Protein Structure, Tertiary, Structure-Activity Relationship, Bacterial Proteins chemistry, DNA-Binding Proteins chemistry, Escherichia coli metabolism
- Abstract
DnaA protein binds specifically to a group of binding sites collectively called as DnaA boxes within the bacterial replication origin to induce local unwinding of duplex DNA. The DNA-binding domain of DnaA, domain IV, comprises the C-terminal 94 amino acid residues of the protein. We overproduced and purified a protein containing only this domain plus a methionine residue. This protein was stable as a monomer and maintained DnaA box-specific binding activity. We then analyzed its solution structure by CD spectrum and heteronuclear multi-dimensional NMR experiments. We established extensive assignments of the 1H, 13C, and 15N nuclei, and revealed by obtaining combined analyses of chemical shift index and NOE connectivities that DnaA domain IV contains six alpha-helices and no beta-sheets, consistent with results of CD analysis. Mutations known to reduce DnaA box-binding activity were specifically located in or near two of the alpha-helices. These findings indicate that the DNA-binding fold of DnaA domain IV is unique among origin-binding proteins.
- Published
- 2002
- Full Text
- View/download PDF
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