22 results on '"Iván Mateos"'
Search Results
2. Effects of Thymbra capitata essential oil on in vitro fermentation end-products and ruminal bacterial communities
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María José Ranilla, Sonia Andrés, Chiara Gini, Filippo Biscarini, Cristina Saro, Alba Martín, Iván Mateos, Secundino López, F. Javier Giráldez, Latifa Abdennebi-Najar, David Pereira, Hanen Falleh, Riadh Ksouri, Paola Cremonesi, Bianca Castiglioni, and Fabrizio Ceciliani
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Medicine ,Science - Abstract
Abstract An in vitro trial was carried out to investigate the effects of natural Thymbra capitata essential oil (NEO) and its main compounds [including carvacrol, p-cymene, γ-terpinene given alone or in a synthetic combination (SEO)] on ruminal fermentation and the bacterial community using batch cultures inoculated with ruminal digesta and incubating two different basal diets [high-forage (F) and high-concentrate (C) diet]. After 24 h of incubation, primary fermentation end-products [gas, methane, volatile fatty acids (VFAs) and ammonia] and rumen microbial diversity were determined. NEO reduced the total VFA concentration (P 0.05) by any of the experimental treatments or diets evaluated. Microbial diversity analysis showed only a moderate effect of carvacrol and SEO on 13 genera, including, mainly, Atopobium and Blautia (involved in subacute ruminal acidosis) or Candidatus Saccharimonas (related to laminitis). In conclusion, T. capitata EO has a limited potential to attain nutritional or environmental benefits, but further research should be carried out to clarify its effects on animal health and microbial food safety.
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- 2023
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3. Effects of Garlic Oil and Cinnamaldehyde on Sheep Rumen Fermentation and Microbial Populations in Rusitec Fermenters in Two Different Sampling Periods
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Jairo García-Rodríguez, Cristina Saro, Iván Mateos, María Dolores Carro, and María José Ranilla
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garlic oil ,cinnamaldehyde ,Rusitec ,methane ,qPCR ,ARISA ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Garlic oil (GO) and cinnamaldehyde (CIN) have shown potential to modify rumen fermentation. The aim of this study was to assess the effects of GO and CIN on rumen fermentation, microbial protein synthesis (MPS), and microbial populations in Rusitec fermenters fed a mixed diet (50:50 forage/concentrate), as well as whether these effects were maintained over time. Six fermenters were used in two 15-day incubation runs. Within each run, two fermenters received no additive, 180 mg/L of GO, or 180 mg/L of CIN. Rumen fermentation parameters were assessed in two periods (P1 and P2), and microbial populations were studied after each of these periods. Garlic oil reduced the acetate/propionate ratio and methane production (p < 0.001) in P1 and P2 and decreased protozoal DNA concentration and the relative abundance of fungi and archaea after P1 (p < 0.05). Cinnamaldehyde increased bacterial diversity (p < 0.01) and modified the structure of bacterial communities after P1, decreased bacterial DNA concentration after P2 (p < 0.05), and increased MPS (p < 0.001). The results of this study indicate that 180 mg/L of GO and CIN promoted a more efficient rumen fermentation and increased the protein supply to the animal, respectively, although an apparent adaptive response of microbial populations to GO was observed.
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- 2024
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4. The Effect of Supplementation with Betaine and Zinc on In Vitro Large Intestinal Fermentation in Iberian Pigs under Heat Stress
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Zaira Pardo, Iván Mateos, Cristina Saro, Rómulo Campos, Héctor Argüello, Manuel Lachica, María José Ranilla, and Ignacio Fernández-Fígares
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Iberian pig ,heat stress ,zinc ,betaine ,in vitro hindgut fermentation ,short-chain fatty acids ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
We investigated the effects of betaine and zinc on the in vitro fermentation of pigs under heat stress (HS). Twenty-four Iberian pigs (43.4 ± 1.2 kg) under HS (30 °C) were assigned to treatments for 4 weeks: control (unsupplemented), betaine (5 g/kg), and zinc (0.120 g/kg) supplemented diet. Rectal content was used as the inoculum in 24-hincubations with pure substrates (starch, pectin, inulin, cellulose). Total gas, short-chain fatty acid (SCFA), and methane production and ammonia concentration were measured. The abundance of total bacteria and several bacterial groups was assessed. Betaine increased the acetate production with pectin and inulin, butyrate production with starch and inulin, and ammonia concentration, and decreased propionate production with pectin and inulin. The abundance of Bifidobacterium and two groups of Clostridium decreased with betaine supplementation. Zinc decreased the production of SCFA and gas with starch and inulin, associated with diminished bacterial activity. Propionate production decreased with starch, pectin, and inulin while butyrate production increased with inulin, and isoacid production increased with cellulose and inulin in pigs supplemented with zinc. The ammonia concentration increased for all substrates. The Clostridium cluster XIV abundance decreased in pigs fed zinc supplemented diets. The results reported were dependent on the substrate fermented, but the augmented butyrate production with both betaine and zinc could be of benefit for the host.
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- 2023
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5. Differential Diet and pH Effects on Ruminal Microbiota, Fermentation Pattern and Fatty Acid Hydrogenation in RUSITEC Continuous Cultures
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Julio Ernesto Vargas, Lorena López-Ferreras, Sonia Andrés, Iván Mateos, Egon Henrique Horst, and Secundino López
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rumen ,RUSITEC ,in vitro ,continuous cultures ,forage ,concentrate ,Fermentation industries. Beverages. Alcohol ,TP500-660 - Abstract
The aim of this study was to distinguish effects due to diet composition from those triggered by ruminal pH on fermentation patterns and microbial profiles in a continuous culture system (RUSITEC). The study followed a 2 × 2 factorial design, with two diets varying in the proportions of forage and concentrate and two pH levels in the culture medium. RUSITEC fermenters were used to simulate rumen fermentation and feed digestibility, fermentation end-products, microbial protein synthesis, microbial community, and long-chain fatty acid profiles in the digesta were determined. Multivariate analyses were applied to summarize the overall results. High concentrate (34% cereal grain, 32% hay) diets were more digestible (p < 0.05) than high forage (10% cereal grain, 78% hay) diets, resulting in a greater (p < 0.05) formation of most fermentation end-products and microbial protein in the rumen. However, there were no significant (p > 0.05) differences between diets in methane production. Ciliate protozoa, anaerobic fungi, some fibrolytic bacteria, hydrogenation of oleic acid, and relative proportion of conjugated linoleic acid were increased (p < 0.05) with high forage diets. A decline in rumen pH from 6.8 to 6.4 decreased (p < 0.05) feed digestibility, protein degradability, and the daily outputs of some fermentation end-products (gas, VFA, acetate, ammonia) but had no effect (p > 0.05) on the synthesis of microbial protein, and on the output of methane, propionate, butyrate or lactate. Minor changes in microbial community profile or the fatty acid relative proportions were observed within this pH range. The overall multivariate analysis revealed a clear discrimination between high-concentrate and high-forage diets, with subtler and less-defined pH effects on ruminal fermentation and microbial communities.
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- 2023
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6. Heat Stress Increases In Vitro Hindgut Fermentation of Distinct Substrates in Iberian Pigs
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Zaira Pardo, Iván Mateos, Rómulo Campos, Andrea Francisco, Manuel Lachica, María José Ranilla, and Ignacio Fernández-Fígares
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heat stress ,Iberian pig ,in vitro hindgut fermentation ,short-chain fatty acids ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Heat stress reduces the feed intake and growth of pigs. We hypothesized that heat stress affects the intestinal fermentation capacity of pigs. Sixteen Iberian pigs (44 ± 1.0 kg) were randomly assigned to one of two treatments (eight pigs/treatment) for 4 weeks—heat stress (HS; 30 °C) ad libitum or thermoneutral (TN; 20 °C) pair feeding. Frozen rectum contents were used as inocula for 24 h in vitro incubations in which a mixture of starches, citrus pectin, inulin from chicory, and cellulose were the substrates. Cellulose was poorly degraded, whereas pectin and the mixture of starches were the most fermentable substrates according to total short-chain fatty acid (SCFA) production. The mixture of starches and inulin produced the greatest amount of gas. For all substrates, heat stress enhanced gas production (8%, p = 0.001), total SCFA production (16%, p = 0.001), and the production of acetate and propionate (12% and 42%, respectively; p = 0.001). The increased isoacid production (33%, p = 0.001) and ammonia concentration (12%, p = 0.001) may indicate protein fermentation under heat stress. In conclusion, the in vitro intestinal fermentation capacity of pigs under heat stress was increased compared to thermoneutral conditions, which may indicate an adaptive response to heat stress.
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- 2020
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7. Replacing Forage by Crude Olive Cake in a Dairy Sheep Diet: Effects on Ruminal Fermentation and Microbial Populations in Rusitec Fermenters
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Jairo García-Rodríguez, Iván Mateos, Cristina Saro, Jesús S. González, María Dolores Carro, and María José Ranilla
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crude olive cake ,Rusitec ,dairy sheep ,qPCR ,ARISA ,microbial protein synthesis ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Olive oil extraction generates large amounts of a highly pollutant by-product called olive cake (OC), and its use in ruminant feeding could be an alternative. This study was designed to evaluate the effects of partially replacing forage by crude OC (COC) in a mixed dairy diet on rumen fermentation and microbial populations in Rusitec fermenters. The COC replaced 33% of the forage (66% maize silage and 33% barley straw) and was included at 16.6% of the total diet. Four fermenters were used in a cross-over design with two 13-day incubation periods. Experimental diets had a 50:50 forage-to-concentrate ratio and were formulated to contain the same protein (16.0%) and neutral detergent fiber (32.5%) levels. Compared with control fermenters, those fed the COC diet showed greater (p ≤ 0.02) pH (6.07 vs. 6.22), diet disappearance (0.709 vs. 0.748), and butyrate proportions (18.0 vs. 19.4), but there were no differences in volatile fatty acids and ammonia production. Microbial growth, bacterial diversity, protozoal abundance, and relative abundance of fungi and archaea were unaffected by diet, although the solid phase of COC-fed fermenters showed greater (p = 0.01) bacterial abundance than control ones. Results indicate that COC could replace 33% of the forage in a mixed dairy diet.
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- 2020
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8. Effects of Replacing Extruded Maize by Dried Citrus Pulp in a Mixed Diet on Ruminal Fermentation, Methane Production, and Microbial Populations in Rusitec Fermenters
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Jairo García-Rodríguez, Cristina Saro, Iván Mateos, Jesús S. González, María Dolores Carro, and María José Ranilla
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citrus pulp ,extruded maize ,qPCR ,ARISA ,microbial protein synthesis ,methane ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Citrus pulp is a highly abundant by-product of the citrus industry. The aim of this study was to assess the effects of replacing extruded maize (EM; 20% of total diet) by dried citrus pulp (DCP; 20%) in a mixed diet on rumen fermentation and microbial populations in Rusitec fermenters. The two diets contained 50% alfalfa hay and 50% concentrate, and the same protein level. Four Rusitec fermenters were used in a cross-over design with two 13-d incubation runs. After 7-d of diet adaptation, diet disappearance, fermentation parameters, microbial growth, and microbial populations were assessed. Fermenters receiving the DCP showed greater pH values and fiber disappearance (p < 0.001) and lower methane production (p = 0.03) than those fed EM. Replacing EM by DCP caused an increase in the proportions of propionate and butyrate (p < 0.001) and a decrease in acetate (p = 0.04). Microbial growth, bacterial diversity, and the quantity of bacteria and protozoa DNA were not affected by the diet, but the relative abundances of fungi and archaea were greater (p < 0.03) in solid and liquid phases of DCP fermenters, respectively. Results indicate that DCP can substitute EM, promoting a more efficient ruminal fermentation.
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- 2020
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9. Butyrate reduces epithelial barrier dysfunction induced by the foodborne mycotoxin deoxynivalenol in cell monolayers derived from pig jejunum organoids
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Julie Alberge, Eloïse Mussard, Carine Al-Ayoubi, Corinne Lencina, Christelle Marrauld, Laurent Cauquil, Caroline S. Achard, Ivan Mateos, Imourana Alassane-Kpembi, Isabelle P. Oswald, Laura Soler, Sylvie Combes, and Martin Beaumont
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Gut microbiota ,metabolites ,toxin ,epithelium ,permeability ,enteroids ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
The foodborne mycotoxin deoxynivalenol (DON) produced by Fusarium species threats animal and human health through disruption of the intestinal barrier. Targeting the gut microbiota and its products appears as a promising strategy to mitigate DON intestinal toxicity. In this study, we investigated whether the bacterial metabolite butyrate could alleviate epithelial barrier disruption induced by DON. We used a model of cell monolayers derived from porcine jejunum organoids allowing to reproduce the cellular complexity of the intestinal epithelium. Our results show that DON dose-dependently disrupted the epithelial barrier integrity, reduced epithelial differentiation, and altered innate immune defenses. Butyrate attenuated the DON-induced increase in paracellular permeability. Butyrate also prevented epithelial barrier dysfunction triggered by anisomycin, a ribosome inhibitor like DON. Moreover, butyrate partially counteracted the effects of DON on tight junctions (TJP1, OCLN), innate epithelial defenses (PTGS2, CD14, TLR4, TLR5), and absorptive cell functions (CA2, VIL1, NHE3, CFTR). In contrast, butyrate did not prevent the toxic effects of DON on mitochondrial metabolism, proliferation and goblet cell functions. Taken together, our results demonstrate that the bacterial metabolite butyrate is able to reduce DON-induced epithelial barrier disruption.
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- 2024
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10. Betaine increases net portal absorption of volatile fatty acids in Iberian pigs
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M. Gómez-García, Cristina Saro, Manuel Lachica, M. J. Ranilla, Iván Mateos, Ignacio Fernández-Fígares, Ministerio de Economía, Industria y Competitividad (España), Junta de Castilla y León, European Commission, Ranilla García, M. José [0000-0002-4000-7704], Saro Higuera, Cristina [0000-0002-1887-4529], Ranilla García, M. José, and Saro Higuera, Cristina
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040301 veterinary sciences ,Swine ,Butyrate ,Valerate ,SF1-1100 ,Bacterial population ,0403 veterinary science ,Net portal flux ,chemistry.chemical_compound ,Betaine ,Animal science ,Lactobacillus ,Animals ,chemistry.chemical_classification ,biology ,0402 animal and dairy science ,Short chain fatty acids ,04 agricultural and veterinary sciences ,biology.organism_classification ,Fatty Acids, Volatile ,040201 dairy & animal science ,Diet ,Animal culture ,Ileal Vein ,Butyrates ,Sus scrofa mediterraneus ,chemistry ,Osmolyte ,Fermentation ,Propionate ,Animal Science and Zoology ,Propionates - Abstract
7 páginas, 2 figuras, 4 tablas., Betaine is an osmolyte with the potential to increase volatile fatty acids (VFAs) production and hence improve intestinal health.The present study investigated how betaine affects portal and arterial concentrations and net portal absorption (NPA) of VFA in growing Iberian pigs. Eight 30 kg BW Iberian growing barrows with indwelling catheters in portal vein, ileal vein and carotid artery were randomly assigned to a control diet or a diet supplemented with 0.5% betaine. Para-aminohippuric acid was infused into the ileal vein as a marker to determine portal blood flow using the dilution method. Blood samples were simultaneously taken from the carotid artery and portal vein at 60, 60, 120, 180, 240, 300 and 360 min after feeding 1 200 g of the diet. The NPA of VFA (acetate, propionate, butyrate, valerate, isobutyrate and caproate) was determined by multiplying the porto-arterial plasma concentration differences by portal plasma flow. Betaine increased NPA of acetate (1.44 fold; P < 0.001) and total VFA (0.55 fold; P < 0.001) while decreased NPA of propionate (0.38 fold; P < 0.05) and valerate (1.46 fold; P < 0.05) compared with control pigs. Estimated heat production potentially derived from NPA of VFA accounted for 0.20–0.27 of metabolizable energy for maintenance. Acetate and propionate accounted for most of the total VFA estimated heat production (0.83–0.89). Regarding bacterial communities, betaine apparently did not change the DNA abundance of fecal total bacteria, Lactobacillus, Bifidobacterium, Enterobacteriaceae, Bacteroides and the Clostridium clusters I, IV and XIV. In conclusion, betaine increased portal appearance and NPA of VFA, contributing to cover maintenance energy requirements, This research was supported by grant AGL2016-80231-R from Ministerio de Economía, Industria y Competitividad, Spain. M. Gómez-García was supported by grant LE131-18 from Junta de Castilla y León co-financed by the European Social Fund.
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- 2021
11. Heat Stress Increases In Vitro Hindgut Fermentation of Distinct Substrates in Iberian Pigs
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Rómulo Campos, Iván Mateos, Andrea Francisco, Zaira Pardo, María José Ranilla, Manuel Lachica, Ignacio Fernández-Fígares, Ministerio de Economía y Competitividad (España), Ranilla García, M. José [0000-0002-4000-7704], and Ranilla García, M. José
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food.ingredient ,Pectin ,Inulin ,short-chain fatty acids ,Article ,heat stress ,Ammonia ,chemistry.chemical_compound ,food ,lcsh:Zoology ,Iberian pig ,Food science ,lcsh:QL1-991 ,Cellulose ,chemistry.chemical_classification ,lcsh:Veterinary medicine ,General Veterinary ,Fatty acid ,food and beverages ,humanities ,chemistry ,Propionate ,in vitro hindgut fermentation ,lcsh:SF600-1100 ,Animal Science and Zoology ,Fermentation ,Hindgut fermentation - Abstract
Heat stress reduces the feed intake and growth of pigs. We hypothesized that heat stress affects the intestinal fermentation capacity of pigs. Sixteen Iberian pigs (44 ±, 1.0 kg) were randomly assigned to one of two treatments (eight pigs/treatment) for 4 weeks&mdash, heat stress (HS, 30 °, C) ad libitum or thermoneutral (TN, 20 °, C) pair feeding. Frozen rectum contents were used as inocula for 24 h in vitro incubations in which a mixture of starches, citrus pectin, inulin from chicory, and cellulose were the substrates. Cellulose was poorly degraded, whereas pectin and the mixture of starches were the most fermentable substrates according to total short-chain fatty acid (SCFA) production. The mixture of starches and inulin produced the greatest amount of gas. For all substrates, heat stress enhanced gas production (8%, p = 0.001), total SCFA production (16%, p = 0.001), and the production of acetate and propionate (12% and 42%, respectively, p = 0.001). The increased isoacid production (33%, p = 0.001) and ammonia concentration (12%, p = 0.001) may indicate protein fermentation under heat stress. In conclusion, the in vitro intestinal fermentation capacity of pigs under heat stress was increased compared to thermoneutral conditions, which may indicate an adaptive response to heat stress.
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- 2020
12. Effects of replacing extruded maize by dried citrus pulp in a mixed diet on ruminal fermentation, methane production, and microbial populations in rusitec fermenters
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Iván Mateos, María Dolores Carro, Jairo García-Rodríguez, Cristina Saro, María José Ranilla, Jesús Salvador González, Ministerio de Ciencia, Innovación y Universidades (España), and Universidad de León
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Microbial protein synthesis ,Butyrate ,Bacterial growth ,engineering.material ,Article ,Rumen ,stomatognathic system ,lcsh:Zoology ,Food science ,lcsh:QL1-991 ,Incubation ,Extruded maize ,chemistry.chemical_classification ,lcsh:Veterinary medicine ,General Veterinary ,biology ,Pulp (paper) ,food and beverages ,biology.organism_classification ,Rusitec ,stomatognathic diseases ,qPCR ,chemistry ,ARISA ,Propionate ,engineering ,lcsh:SF600-1100 ,Citrus pulp ,Animal Science and Zoology ,Fermentation ,Methane ,Bacteria - Abstract
Citrus pulp is a highly abundant by-product of the citrus industry. The aim of this study was to assess the effects of replacing extruded maize (EM, 20% of total diet) by dried citrus pulp (DCP, 20%) in a mixed diet on rumen fermentation and microbial populations in Rusitec fermenters. The two diets contained 50% alfalfa hay and 50% concentrate, and the same protein level. Four Rusitec fermenters were used in a cross-over design with two 13-d incubation runs. After 7-d of diet adaptation, diet disappearance, fermentation parameters, microbial growth, and microbial populations were assessed. Fermenters receiving the DCP showed greater pH values and fiber disappearance (p <, 0.001) and lower methane production (p = 0.03) than those fed EM. Replacing EM by DCP caused an increase in the proportions of propionate and butyrate (p <, 0.001) and a decrease in acetate (p = 0.04). Microbial growth, bacterial diversity, and the quantity of bacteria and protozoa DNA were not affected by the diet, but the relative abundances of fungi and archaea were greater (p <, 0.03) in solid and liquid phases of DCP fermenters, respectively. Results indicate that DCP can substitute EM, promoting a more efficient ruminal fermentation.
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- 2020
13. Replacing Soybean Meal with Urea in Diets for Heavy Fattening Lambs: Effects on Growth, Metabolic Profile and Meat Quality
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Sonia Andrés, Javier Mateo, Cristina Saro, Francisco Javier Giráldez, Alba Martín, María José Ranilla, Iván Mateos, Secundino López, Junta de Castilla y León, European Commission, Andrés, Sonia, Ranilla García, M. José, López, Secundino, Giráldez, Francisco Javier, Andrés, Sonia [0000-0001-5255-1582], Ranilla García, M. José [0000-0002-4000-7704], López, Secundino [0000-0001-6267-683X], and Giráldez, Francisco Javier [0000-0002-0680-1541]
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Feed efficiency ,animal diseases ,Soybean meal ,Metabolic profile ,urea ,Biology ,Feed conversion ratio ,Article ,meat quality ,Rumen ,chemistry.chemical_compound ,Animal science ,Rumen fermentation ,feed efficiency ,medicine ,Urea ,Dry matter ,Meat quality ,Acidosis ,General Veterinary ,food and beverages ,Metabolic acidosis ,medicine.disease ,Assaf lambs ,metabolic profile ,rumen fermentation ,Blood chemistry ,chemistry ,Animal Science and Zoology ,acidosis ,medicine.symptom - Abstract
14 páginas, 7 tablas., Thirty-six Assaf male lambs (29.4 ± 3.10 kg body weight (BW)) were used to study the feasibility of including urea (at 0, 0.6 or 0.95% of dry matter for Control, Urea1, and Urea2 diets, respectively) in substitution of soybean meal in fattening diets. Animals were individually penned and feed intake was recorded daily. Blood samples were taken at days 35 and 63 of the experimental period to determine the acid-base status and the biochemical profile. At the end of the experiment (nine weeks), lambs were slaughtered, ruminal contents were collected and carcass and meat quality were evaluated. There were not differences (p > 0.05) among treatments in dry matter intake, animal performance, ruminal fermentation pattern, and carcass and meat parameters. Serum albumin concentration was higher and concentration of HCO3 and total CO2 in blood were lower in Urea2 compared to Urea1 and Control lambs. These results, together with the tendency to lower (p = 0.065) blood pH in this group might suggest a moderate metabolic acidosis. Partial replacement of soybean meal with urea did not impair growth rate in heavy fattening Assaf lambs (from 29 to 50 kg body weight), reduced feeding costs and had no adverse effects on feed efficiency, rumen fermentation and carcass and meat quality., This research was funded by Junta de Castilla y León, project CSI047 P17. Cristina Saro acknowledges the receipt of a postdoctoral contract funded by the European Regional Development Fund.
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- 2019
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14. Fumonisin-Exposure Impairs Age-Related Ecological Succession of Bacterial Species in Weaned Pig Gut Microbiota
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Sylvie Combes, Isabelle P. Oswald, Laurent Cauquil, Joëlle Laffitte, Sara Botti, Céline Barilly, Philippe Pinton, Géraldine Pascal, Anne Marie Cossalter, Iván Mateos, Génétique Physiologie et Systèmes d'Elevage (GenPhySE ), École nationale supérieure agronomique de Toulouse [ENSAT]-Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Plateforme Ezop (Ezop), ToxAlim (ToxAlim), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Ecole Nationale Vétérinaire de Toulouse (ENVT), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Ecole d'Ingénieurs de Purpan (INPT - EI Purpan), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de la Recherche Agronomique (INRA)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National de la Recherche Agronomique (INRA), Biosynthèse & Toxicité des Mycotoxines (ToxAlim-BioToMyc), PTP Science Park, Région Occitanie CLE 2014, ANR Fumolip (ANR-16-CE21-0003), ANR LipoReg (ANR-15-Carn0016), ANR ExpoMycoPig (ANR-17-Carn012), Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT), and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-École nationale supérieure agronomique de Toulouse [ENSAT]
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Male ,0301 basic medicine ,Aging ,MiSeq 16S rDNA sequencing ,Swine ,Health, Toxicology and Mutagenesis ,[SDV]Life Sciences [q-bio] ,030106 microbiology ,lcsh:Medicine ,Veillonellaceae ,Zoology ,Weaning ,Biology ,Gut flora ,Toxicology ,Fumonisins ,Article ,Feces ,03 medical and health sciences ,chemistry.chemical_compound ,Diversity index ,fumonisin ,fluids and secretions ,Lactobacillus ,Fumonisin ,microbiota ,Animals ,2. Zero hunger ,lcsh:R ,Lachnospiraceae ,food and beverages ,pigs ,biology.organism_classification ,Animal Feed ,Diet ,Gastrointestinal Microbiome ,3. Good health ,030104 developmental biology ,chemistry ,Toxicity ,Roseburia - Abstract
Pigs are highly affected by dietary mycotoxin contamination and particularly by fumonisin. The effects of fumonisin on pig intestinal health are well documented, but little is known regarding its impact on gut microbiota. We investigate the effects of the fumonisin (FB1, 12 mg/kg feed) on the fecal microbiota of piglets (n = 6) after 0, 8, 15, 22, and 29 days of exposure. A control group of six piglets received a diet free of FB1. Bacterial community diversity, structure and taxonomic composition were carried out by V3&ndash, V4 16S rRNA gene sequencing. Exposure to FB1 decreases the diversity index, and shifts and constrains the structure and the composition of the bacterial community. This takes place as early as after 15 days of exposure and is at a maximum after 22 days of exposure. Compared to control, FB1 alters the ecological succession of fecal microbiota species toward higher levels of Lactobacillus and lower levels of the Lachnospiraceae and Veillonellaceae families, and particularly OTUs (Operational Taxonomic Units) of the genera Mitsuokella, Faecalibacterium and Roseburia. In conclusion, FB1 shifts and constrains age-related evolution of microbiota. The direct or indirect contribution of FB1 microbiota alteration in the global host response to FB1 toxicity remains to be investigated.
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- 2018
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15. Shifts in microbial populations in Rusitec fermenters as affected by the type of diet and impact of the method for estimating microbial growth (15N v. microbial DNA)
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M. J. Ranilla, Iván Mateos, María Dolores Carro, Cristina Saro, and Ministerio de Economía y Competitividad (España)
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0301 basic medicine ,DNA, Bacterial ,Rumen ,Microbial DNA ,Ribosomal Intergenic Spacer analysis ,Bacterial growth ,microbial populations ,SF1-1100 ,Incubation period ,Microbiology ,03 medical and health sciences ,Animals ,Food science ,Incubation ,2. Zero hunger ,Rusitec fermenters ,Fibrobacter succinogenes ,Cross-Over Studies ,Sheep ,biology ,Bacteria ,0402 animal and dairy science ,bacterial diversity ,Hordeum ,04 agricultural and veterinary sciences ,biology.organism_classification ,040201 dairy & animal science ,Animal Feed ,Animal culture ,Diet ,qPCR ,030104 developmental biology ,Microbial populations ,Bacterial diversity ,Fermentation ,Animal Science and Zoology ,Medicago sativa - Abstract
10 páginas, 4 tablas, 3 figuras., Rusitec fermenters are in vitro systems widely used to study ruminal fermentation, but little is known about the microbial populations establishing in them. This study was designed to assess the time evolution of microbial populations in fermenters fed medium- (MC; 50% alfalfa hay : concentrate) and high-concentrate diets (HC; 15 : 85 barley straw : concentrate). Samples from solid (SOL) and liquid (LIQ) content of fermenters were taken immediately before feeding on days 3, 8 and 14 of incubation for quantitative polymerase chain reaction and automated ribosomal intergenic spacer analysis analyses. In SOL, total bacterial DNA concentration and relative abundance of Ruminococcus flavefaciens remained unchanged over the incubation period, but protozoal DNA concentration and abundance of Fibrobacter succinogenes, Ruminococcus albus and fungi decreased and abundance of methanogenic archaea increased. In LIQ, total bacterial DNA concentration increased with time, whereas concentration of protozoal DNA and abundance of methanogens and fungi decreased. Diet × time interactions were observed for bacterial and protozoal DNA and relative abundance of F. succinogenes and R. albus in SOL, as well as for protozoal DNA in LIQ. Bacterial diversity in SOL increased with time, but no changes were observed in LIQ. The incubated diet influenced all microbial populations, with the exception of total bacteria and fungi abundance in LIQ. Bacterial diversity was higher in MC-fed than in HC-fed fermenters in SOL, but no differences were detected in LIQ. Values of pH, daily production of volatile fatty acids and CH4 and isobutyrate proportions remained stable over the incubation period, but other fermentation parameters varied with time. The relationships among microbial populations and fermentation parameters were in well agreement with those previously reported in in vivo studies. Using 15N as a microbial marker or quantifying total microbial DNA for estimating microbial protein synthesis offered similar results for diets comparison, but both methods presented contrasting results for microbial growth in SOL and LIQ phases. The study showed that fermentation parameters remained fairly stable over the commonly used sampling period (days 8 to 14), but shifts in microbial populations were detected. Moreover, microbial populations differed markedly from those in the inocula, which indicates the difficulty of directly transposing results on microbial populations developed in Rusitec fermenters to in vivo conditions., This work was supported by the Spanish Ministry of Economy and Competitiveness under the Project AGL2011-22628. We would like to thank Dr Benjamin Rabanal for helping us with qPCR and ARISA analyses.
- Published
- 2017
16. Fermentación ruminal: un análisis de las poblaciones microbianas y los parámetros fermentativos en sistemas in vitro = Ruminal fermentation: an analysis of microbial populations and fermentation parameters in in vitro systems
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Iván Mateos Álvarez, María José Ranilla García, Carro Travieso, María Dolores, Producción Animal, and Facultad de Veterinaria
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Sanidad animal ,Nutrición ,Ruminal fermentation ,Ganado ovino ,Fermentation ,Food science ,Biology ,Veterinaria ,In vitro ,Microbiology ,Fermentación ruminal - Abstract
307 p. En esta Tesis Doctoral se realizaron varios experimentos para analizar diferentes factores que afectan a la fermentación ruminal in vitro y a los microorganismos ruminales que se desarrollan en cultivos no renovados de microorganismos ruminales y en fermentadores RUSITEC. El objetivo del primer estudio fue evaluar los efectos de dosis crecientes [0 (control: CON), 20, 60, 180 y 540 mg/L de medio de incubación] de aceite de ajo (GO) y cinamaldehído (CIN) sobre la fermentación ruminal in vitro de dos dietas. Los cultivos no renovados de microorganismos ruminales fueron inoculados con fluido ruminal procedente de cuatro ovejas alimentadas con una dieta con el 50% de concentrado (MC; 50 : 50 heno de alfalfa : concentrado) o de cuatro ovejas alimentadas con dieta alta en concentrado (AC; 15 : 85 paja de cebada : concentrado)
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- 2017
17. Influence of rumen contents’ processing method on microbial populations in the fluid and subsequent in vitro fermentation of substrates of variable composition
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María Dolores Carro, M. Ramos, M. J. Ranilla, Iván Mateos, Cristina Saro, and Ministerio de Economía y Competitividad (España)
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0301 basic medicine ,Rumen ,In vitro fermentation ,Ribosomal Intergenic Spacer analysis ,030106 microbiology ,Biology ,03 medical and health sciences ,Inoculum preparation ,Botany ,Dry matter ,Food science ,Incubation ,Fibrobacter succinogenes ,0402 animal and dairy science ,food and beverages ,04 agricultural and veterinary sciences ,Straw ,040201 dairy & animal science ,3. Good health ,qPCR ,Microbial populations ,ARISA ,Hay ,Animal Science and Zoology ,Fermentation - Abstract
12 páginas, 4 tablas, 3 figuras., The in vitro batch culture technique is being increasingly used to study rumen fermentation, but the results are affected by several factors, being the source of the inoculum one of the most relevant. This work was conducted to assess the effects of different processing methods of ruminal contents on microbial populations in the obtained fluid, and its influence on fermentation parameters when the fluid was used as inoculum for in vitro incubations. Rumen contents were obtained from four rumen-fistulated sheep fed a 2:1 alfalfa hay:concentrate diet and subjected to the following treatments: SQ: squeezed through four layers of cheesecloth; FL: SQ treatment and further filtration through a 100-m nylon cloth; STO: blended for three min at 230 rev min−1 in a Stomacher® and further filtrations as in SQ. Microbial populations’ abundance and bacterial diversity in the ruminal fluids were analysed by quantitative PCR (qPCR) and automated ribosomal intergenic spacer analysis (ARISA), respectively. Three forages (alfalfa hay, grass hay and barley straw) were incubated in vitro, either alone or mixed with concentrate (1:1), using each of the ruminal fluids as inoculum. There were no differences between SQ and FL methods in any of the microbial populations analysed, but STO increased the relative abundance of Fibrobacter succinogenes and Ruminococcus albus (P < 0.05) and decreased (P < 0.05) the concentration of protozoal DNA compared with SQ. Bacterial diversity was not affected (P > 0.05) by the processing methods. There were no interactions (P > 0.05) between the processing method and the characteristics of the substrates for any of the fermentation parameters analysed. Compared with SQ, the STO method resulted in greater (P < 0.05) methane production and ammonia-N concentrations in 8 h incubations. After 24 h of incubation, the use of STO inoculum increased (P < 0.05) methane production and dry matter degradability compared with SQ, with no differences in the rest of the parameters., This work was supported by the Spanish Ministry of Economy and Competitiveness under the Project AGL2011-22628.
- Published
- 2016
18. Comparison of fermentation characteristics and bacterial diversity in the rumen of sheep and in batch cultures of rumen microorganisms
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Cristina Saro, María Dolores Carro, M. J. Ranilla, Iván Mateos, and Ministerio de Economía y Competitividad (España)
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Microbial-populations ,Ribosomal Intergenic Spacer analysis ,Forage ,Concentrate ratio ,03 medical and health sciences ,Rumen ,In-vitro ,Animal science ,Cellulolytic bacteria ,Genetics ,Silvicultura ,Patterns ,Incubation ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,0402 animal and dairy science ,Fatty acid ,food and beverages ,Ruminal fermentation ,04 agricultural and veterinary sciences ,Diets ,Intergenic spacer analysis ,040201 dairy & animal science ,Digesta flow kinetics ,chemistry ,Hay ,Propionate ,Animal Science and Zoology ,Fermentation ,Agronomy and Crop Science - Abstract
10 páginas., The objective of the current study was to assess how closely batch cultures (BC) of rumen microorganisms can mimic the dietary differences in fermentation characteristics found in the rumen, and to analyse changes in bacterial diversity over the in vitro incubation period. Four ruminally and duodenally cannulated sheep were fed four diets having forage : concentrate ratios (FCR) of 70 : 30 or 30 : 70, with either alfalfa hay or grass hay as forage. Rumen fluid from each sheep was used to inoculate BC containing the same diet fed to the donor sheep, and the main rumen fermentation parameters were determined after 24 h of incubation. There were differences between BC and sheep in the magnitude of most measured parameters, but BC detected differences among diets due to forage type similar to those found in sheep. In contrast, BC did not reproduce the dietary differences due to FCR found in sheep for pH, degradability of neutral detergent fibre and total volatile fatty acid (VFA) concentrations. There were differences between systems in the magnitude of most determined parameters and BC showed higher pH values and NH3-N concentrations, but lower fibre degradability and VFA and lactate concentrations compared with sheep. There were significant relationships between in vivo and in vitro values for molar proportions of acetate, propionate and butyrate, and the acetate : propionate ratio. The automated ribosomal intergenic spacer analysis (ARISA) of 16S ribosomal deoxyribonucleic acid showed that FCR had no effect on bacterial diversity either in the sheep rumen fluid used as inoculum (IN) or in BC samples. In contrast, bacterial diversity was greater with alfalfa hay diets than those with grass hay in the IN, but was unaffected by forage type in the BC. Similarity index between the bacterial communities in the inocula and those in the BC ranged from 67.2 to 74.7%, and was unaffected by diet characteristics. Bacterial diversity was lower in BC than in the inocula with 14 peaks out of a total of 181 detected in the ARISA electropherograms never appearing in BC samples, which suggests that incubation conditions in the BC may have caused a selection of some bacterial strains. However, each BC sample showed the highest similarity index with its corresponding rumen IN, which highlights the importance of using rumen fluid from donors fed a diet similar to that being incubated in BC when conducting in vitro experiments., Funding provided by the Spanish C.I.C.Y.T. (Project No. AGL2011-22628) is gratefully acknowledged.
- Published
- 2015
19. Nutritive value for ruminants of winter oats-legume intercrops in organic cultivation
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Iván Mateos, A. Díaz, María L. Tejido, Mª Dolores Carro Travieso, C. Palacios, María José Ranilla, Cristina Saro, Junta de Castilla y León, and Consejo Superior de Investigaciones Científicas (España)
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Irrigation ,Yield ,animal structures ,Common vetch ,030309 nutrition & dietetics ,Drought tolerance ,Forage ,Growth ,Biology ,03 medical and health sciences ,Rumen ,Degradation ,In-vitro ,Legume ,2. Zero hunger ,0303 health sciences ,Vetch mixtures ,Agricultura ,food and beverages ,Plains ,Intercropping ,04 agricultural and veterinary sciences ,15. Life on land ,biology.organism_classification ,Quality ,Agronomy ,Seeding ratios ,040103 agronomy & agriculture ,Environmental management system ,0401 agriculture, forestry, and fisheries ,Animal Science and Zoology ,Monoculture ,Food Science - Abstract
Winter oats were grown according to European organic farming regulations in monoculture (oats) and in intercropping with bard vetch (BAV), bitter vetch (BIV) or both legumes (MIX) to evaluate the effects of intercropping on forage yield and nutritive value for ruminants. The experiment was carried out as a randomised complete block design with four replications, and whole forage samples were obtained at two harvest dates (June and July). For both harvest times, all intercrops increased (P < 0.05) forage yield compared with oats, but forage crude protein content was only increased (P < 0.05) for BAV and MIX. Compared with oats, intercropping with BAV increased (P < 0.05) in vitro rate of gas production and total volatile fatty acid production, indicating a higher rate and extent of rumen degradation of BAV forage. In contrast, BIV forage harvested in June had lower (P < 0.05) rate of gas production and total volatile fatty acid production than June oats, but in general no differences in the in vitro rumen fermentation were detected between oats and BIV samples harvested in July. The results indicate that forage yield and quality can be enhanced by intercropping oats with BAV; however, intercropping with BIV increased yield but decreased nutritive value of the forage. © CSIRO 2014., Junta de Castilla y Leon LE129A12-1; Spanish CSIC (JAE-doc program)
- Published
- 2014
20. The influence of diet type (dairy versus intensive fattening) on the effectiveness of garlic oil and cinnamaldehyde to manipulate in vitro ruminal fermentation and methane production
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María L. Tejido, María Dolores Carro, C. Kamel, Cristina Saro, M. J. Ranilla, Iván Mateos, Ministerio de Educación y Ciencia (España), and Ministerio de Ciencia e Innovación (España)
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Diallyl disulfide ,Garlic Oil ,Butyrate ,Concentrate ratio ,Biology ,Continous-culture ,Cinnamaldehyde ,03 medical and health sciences ,chemistry.chemical_compound ,Rumen microbial fermentation ,Animal science ,Maize-silage ,Natural plant-extracts ,Incubation ,030304 developmental biology ,2. Zero hunger ,chemistry.chemical_classification ,0303 health sciences ,Sheep ,Inoculation ,0402 animal and dairy science ,Fatty acid ,04 agricultural and veterinary sciences ,040201 dairy & animal science ,Digesta flow kinetics ,Dose-response ,chemistry ,Agronomy ,Digestibility ,Environmental management system ,Animal Science and Zoology ,Fermentation ,Food Science - Abstract
9 páginas., The objective of this study was to evaluate the effects of increasing doses [0 (control: CON), 20, 60, 180 and 540 mg/L incubation medium] of garlic oil (GO) and cinnamaldehyde (CIN) on in vitro ruminal fermentation of two diets. Batch cultures of mixed ruminal microorganisms were inoculated with ruminal fluid from four sheep fed a medium-concentrate diet (MC; 50 : 50 alfalfa hay : concentrate) or four sheep fed a high-concentrate diet (HC; 15 : 85 barley straw : concentrate). Diets MC and HC were representative of those fed to dairy and fattening ruminants, respectively. Samples of each diet were used as incubation substrates for the corresponding inoculum, and the incubation was repeated on 4 different days (four replicates per experimental treatment). There were GO x diet-type and CIN x diet-type interactions (P < 0.001-0.05) for many of the parameters determined, indicating different effects of both oils depending on the diet type. In general, effects of GO were more pronounced for MC compared with HC diet. Supplementation of GO did not affect (P > 0.05) total volatile fatty acid (VFA) production at any dose. For MC diet, GO at 60, 180 and 540 mg/L decreased (P < 0.05) molar proportion of acetate (608, 569 and 547 mmol/mol total VFA, respectively), and increased (P < 0.05) propionate proportion (233, 256 and 268 mmol/mol total VFA, respectively), compared with CON values (629 and 215 mmol/mol total VFA for acetate and propionate, respectively). A minimum dose of 180 mg of GO/L was required to produce similar modifications in acetate and propionate proportions with HC diet, but no effects (P > 0.05) on butyrate proportion were detected. Methane/VFA ratio was reduced (P < 0.05) by GO at 60, 180 and 540 mg/L for MC diet (0.23, 0.16 and 0.10 mol/mol, respectively), and by GO at 20, 60, 180 and 540 mg/L for HC diet (0.19, 0.19, 0.16 and 0.08 mol/mol, respectively), compared with CON(0.26 and 0.21 mol/mol for MC and HC diets, respectively). No effects (P = 0.16-0.85) of GO on final pH and concentrations of NH3-N and lactate were detected. For both diet types, the highest CIN dose decreased (P < 0.05) production of total VFA, gas and methane, which would indicate an inhibition of fermentation. Compared with CON, CIN at 180 mg/L increased (P < 0.05) acetate proportion for the MC (629 and 644 mmol/mol total VFA for CON and CIN, respectively) and HC (525 and 540 mmol/mol total VFA, respectively) diets, without affecting the proportions of any other VFA or total VFA production. Whereas for MC diet CIN at 60 and 180 mg/L decreased (P < 0.05) NH3-N concentrations compared with CON, only a trend (P < 0.10) was observed for CIN at 180 mg/L with the HC diet. Supplementation of CIN up to 180 mg/L did not affect (P = 0.18-0.99) lactate concentrations and production of gas and methane for any diet. The results show that effectiveness of GO and CIN to modify ruminal fermentation may depend on diet type, which would have practical implications if they are confirmed in vivo., Spanish C.I.C.Y.T. AGL2008-04707-C02-02 AIB2010NZ-00190; M.E.C. of Spain AP2006-03049
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- 2013
- Full Text
- View/download PDF
21. Fumonisin-Exposure Impairs Age-Related Ecological Succession of Bacterial Species in Weaned Pig Gut Microbiota
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Ivan Mateos, Sylvie Combes, Géraldine Pascal, Laurent Cauquil, Céline Barilly, Anne-Marie Cossalter, Joëlle Laffitte, Sara Botti, Philippe Pinton, and Isabelle P. Oswald
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fumonisin ,microbiota ,pigs ,MiSeq 16S rDNA sequencing ,Medicine - Abstract
Pigs are highly affected by dietary mycotoxin contamination and particularly by fumonisin. The effects of fumonisin on pig intestinal health are well documented, but little is known regarding its impact on gut microbiota. We investigate the effects of the fumonisin (FB1, 12 mg/kg feed) on the fecal microbiota of piglets (n = 6) after 0, 8, 15, 22, and 29 days of exposure. A control group of six piglets received a diet free of FB1. Bacterial community diversity, structure and taxonomic composition were carried out by V3–V4 16S rRNA gene sequencing. Exposure to FB1 decreases the diversity index, and shifts and constrains the structure and the composition of the bacterial community. This takes place as early as after 15 days of exposure and is at a maximum after 22 days of exposure. Compared to control, FB1 alters the ecological succession of fecal microbiota species toward higher levels of Lactobacillus and lower levels of the Lachnospiraceae and Veillonellaceae families, and particularly OTUs (Operational Taxonomic Units) of the genera Mitsuokella, Faecalibacterium and Roseburia. In conclusion, FB1 shifts and constrains age-related evolution of microbiota. The direct or indirect contribution of FB1 microbiota alteration in the global host response to FB1 toxicity remains to be investigated.
- Published
- 2018
- Full Text
- View/download PDF
22. Comparing chemical composition and digestibility of pedicels and palm leaves as a source for livestock feeding by in vitro and in situ techniques
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Boufennara, S., Bouazza, L., Medjekal, S., Rahal, K., Iván Mateos, Ranilla, M. J., Lopez, S., Ministry of Higher Education and Scientific Research (Algeria), and CSIC-ULE - Instituto de Ganadería de Montaña (IGM)
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Chemical compositions ,food and beverages ,Palm date ,In situ technique ,In vitro digestibility ,Tannins - Abstract
14 páginas, 5 tablas., The aim of this study was to determine the chemical composition and in vitro digestibility, and to estimate the in vitro fermentation parameters of palm leaves and pedicels from Ghars palm variety. A rumen in situ technique was also used to examine In vitro Digestible Dry Matter (IDDM), In vitro Digestible Crude Protein (IDCP), and In vitro Digestible Neutral Fiber (IDNF), and rate and extent of gas production. Vetch-oat hay was taken as a reference feed material. The samples were collected in Tolga district (southeast Algeria). TheCrude Protein (CP) content of the plant species was low for pedicels and palm leaves (33 and 60 g kg−1 DM, respectively). The highest content of total extractable phenols, tannins and condensed tannins was observed in palm leaves whereas pedicels showed lower concentrations. In vitro digestibility and in situ DM disappearance were slightly different for the examined forages. Analogue trends were observed for the in vitro fermentation kinetics estimated from the gas production curves. Pedicels showed the highest DM effective degradability (ED; assuming a passage rate of 0.03 h-1 ) whereas palm leaves seemed to be a poorly degradable material with an ED coefficient of 0.39 and 0.14 g g -1DM, respectively. Despite the moderate CP and high fiber content along with in vitro digestibility and in situ DM disappearance found in pedicels, in comparison with vetch oat hay degradation, it indicated that this plant could have a greater nutritional value. Dry matter disappearance after 144 h of incubation was negatively correlated with phenolic compounds and total extractable tannins, suggesting that the in vitro techniques can be appropriate for detecting the presence of anti-nutritional substances in shrubs., Financial support received from the Algerian Ministry of Higher Education and Scientific is gratefully acknowledged. The author is grateful to the Department de Production Animal, CSIC-Universidad de León, Spain, for accepting performing all experiments in there. The author is particularly grateful to S. Lopez for his assistance and technical support.
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