6 results on '"Isaiah Shriner"'
Search Results
2. Inherently confinable split-drive systems in Drosophila
- Author
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Gerard Terradas, Anna B. Buchman, Jared B. Bennett, Isaiah Shriner, John M. Marshall, Omar S. Akbari, and Ethan Bier
- Subjects
Science - Abstract
NHEJ alleles and Cas9 remnants after a gene drive introduction are scientific and public concerns. Here, the authors use split drives with recoded rescue elements to target essential genes and minimize the appearance of NHEJ alleles while also leaving no trace of Cas9.
- Published
- 2021
- Full Text
- View/download PDF
3. Genetically Encoded CRISPR Components Yield Efficient Gene Editing in the Invasive Pest Drosophila suzukii
- Author
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Nikolay P. Kandul, Anna Buchman, Fang Li, Esther J. Belikoff, Junru Liu, Isaiah Shriner, Omar S. Akbari, Akihiko Yamamoto, Ting Yang, and Maxwell J. Scott
- Subjects
Genetics ,animal structures ,biology ,fungi ,food and beverages ,biology.organism_classification ,Genome editing ,Yield (chemistry) ,CRISPR ,PEST analysis ,Drosophila suzukii ,Drosophila ,Biotechnology - Abstract
Originally from Asia, Drosophila suzukii Matsumura is a global pest of economically important soft-skinned fruits. Also commonly known as spotted wing drosophila, it is largely controlled through r...
- Published
- 2021
- Full Text
- View/download PDF
4. Engineered reproductively isolated species drive reversible population replacement
- Author
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Junru Liu, Igor Antoshechkin, Omar S. Akbari, Anna Buchman, Isaiah Shriner, Ting Yang, Michael Perry, and John M. Marshall
- Subjects
0301 basic medicine ,CRISPR-Cas9 genome editing ,Male ,Population Dynamics ,General Physics and Astronomy ,Population Replacement ,Evolutionary biology ,Lethal ,Regenerative Medicine ,Gene flow ,Synthetic biology ,0302 clinical medicine ,INDEL Mutation ,CRISPR-Associated Protein 9 ,Melanogaster ,CRISPR ,Clustered Regularly Interspaced Short Palindromic Repeats ,Kinetoplastida ,Multidisciplinary ,Reproductive isolation ,Drosophila melanogaster ,Female ,Biotechnology ,RNA, Guide, Kinetoplastida ,Gene Flow ,Reproductive Isolation ,Genetic Speciation ,Science ,Bioengineering ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,Genetics ,Animals ,Gene ,Gene Drive Technology ,General Chemistry ,Gene drive ,Insect disease ,biology.organism_classification ,030104 developmental biology ,Good Health and Well Being ,Genes ,RNA ,Genes, Lethal ,030217 neurology & neurosurgery ,Guide - Abstract
Engineered reproductive species barriers are useful for impeding gene flow and driving desirable genes into wild populations in a reversible threshold-dependent manner. However, methods to generate synthetic barriers are lacking in advanced eukaryotes. Here, to overcome this challenge, we engineer SPECIES (Synthetic Postzygotic barriers Exploiting CRISPR-based Incompatibilities for Engineering Species), an engineered genetic incompatibility approach, to generate postzygotic reproductive barriers. Using this approach, we create multiple reproductively isolated SPECIES and demonstrate their reproductive isolation and threshold-dependent gene drive capabilities in D. melanogaster. Given the near-universal functionality of CRISPR tools, this approach should be portable to many species, including insect disease vectors in which confinable gene drives could be of great practical utility., There exist only a handful of methods to engineer reproductive barriers in eukaryotes. Here the authors use CRISPR to engineer multiple barriers in D. melanogaster and model their spread.
- Published
- 2021
5. Genetically Encoded CRISPR components Yield Efficient Gene Editing in the Invasive Pest,Drosophila suzukii
- Author
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Esther J. Belikoff, Anna Buchman, Isaiah Shriner, Nikolay P. Kandul, Junru Liu, Omar S. Akbari, Maxwell J. Scott, Fang Li, Ting Yang, and Akihiko Yamamoto
- Subjects
biology ,Genome editing ,Cas9 ,Drosophilidae ,CRISPR ,Computational biology ,Guide RNA ,biology.organism_classification ,Drosophila suzukii ,Drosophila ,Functional genomics - Abstract
Originally from Asia,Drosophila suzukii(Matsumura, 1931, Diptera:Drosophilidae) is presently a global pest of economically important soft-skinned fruits. Also commonly known as spotted wingDrosophila(SWD), it is largely controlled through repeated applications of broad-spectrum insecticides. There is a pressing need for a better understanding of SWD biology and for developing alternative environmentally-friendly methods of control. The RNA-guided Cas9 nuclease has revolutionized functional genomics and is an integral component of several recently developed genetic strategies for population control of insects. Here we have developed transgenic strains that encode three different terminators and four different promoters to express Cas9 in both the soma and/or germline of SWD. The Cas9 lines were evaluated through genetic crossing to transgenic lines that encode single guide RNAs targeting the conserved X-linkedyellowbody andwhiteeye genes. We find that several Cas9/gRNA lines display very high editing capacity. Going forward, these tools will be instrumental for evaluating gene function in SWD and may provide tools useful for the development of new genetic strategies for control of this invasive species.
- Published
- 2021
- Full Text
- View/download PDF
6. Inherently confinable split-drive systems in Drosophila
- Author
-
Anna Buchman, Omar S. Akbari, Gerard Terradas, Jared B. Bennett, Ethan Bier, Isaiah Shriner, and John M. Marshall
- Subjects
0301 basic medicine ,Male ,CRISPR-Cas9 genome editing ,DNA End-Joining Repair ,Science ,Mutant ,General Physics and Astronomy ,Genetically Modified ,General Biochemistry, Genetics and Molecular Biology ,Article ,Homology directed repair ,Animals, Genetically Modified ,03 medical and health sciences ,0302 clinical medicine ,Genetics ,CRISPR ,Animals ,Clustered Regularly Interspaced Short Palindromic Repeats ,Gene conversion ,Allele ,Gene ,Alleles ,Synthetic biology ,Gene Editing ,Multidisciplinary ,biology ,Cas9 ,Contraception/Reproduction ,fungi ,Gene Drive Technology ,Recombinational DNA Repair ,Gene drive ,General Chemistry ,biology.organism_classification ,Phenotype ,enzymes and coenzymes (carbohydrates) ,030104 developmental biology ,Drosophila melanogaster ,embryonic structures ,Genetic engineering ,Drosophila ,Female ,CRISPR-Cas Systems ,030217 neurology & neurosurgery ,Biotechnology - Abstract
CRISPR-based gene-drive systems, which copy themselves via gene conversion mediated by the homology-directed repair (HDR) pathway, have the potential to revolutionize vector control. However, mutant alleles generated by the competing non-homologous end-joining (NHEJ) pathway, resistant to Cas9 cleavage, can interrupt the spread of gene-drive elements. We hypothesized that drives targeting genes essential for viability or reproduction also carrying recoded sequences that restore endogenous gene functionality should benefit from dominantly-acting maternal clearance of NHEJ alleles combined with recessive Mendelian culling processes. Here, we test split gene-drive (sGD) systems in Drosophila melanogaster that are inserted into essential genes required for viability (rab5, rab11, prosalpha2) or fertility (spo11). In single generation crosses, sGDs copy with variable efficiencies and display sex-biased transmission. In multigenerational cage trials, sGDs follow distinct drive trajectories reflecting their differential tendencies to induce target chromosome damage and/or lethal/sterile mosaic Cas9-dependent phenotypes, leading to inherently confinable drive outcomes., NHEJ alleles and Cas9 remnants after a gene drive introduction are scientific and public concerns. Here, the authors use split drives with recoded rescue elements to target essential genes and minimize the appearance of NHEJ alleles while also leaving no trace of Cas9.
- Published
- 2020
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