152 results on '"Iolanda Filella"'
Search Results
2. Aspect Matters: Unraveling Microclimate Impacts on Mountain Greenness and Greening
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Gaofei Yin, Jiangliu Xie, Dujuan Ma, Qiaoyun Xie, Aleixandre Verger, Adrià Descals, Iolanda Filella, and Josep Peñuelas
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Geophysics. Cosmic physics ,QC801-809 - Abstract
Abstract Mountains are vital ecosystems, yet predicting plant growth there is complex due to diverse microclimates on slopes. Equatorial‐facing slopes (EFSs) are drier and warmer, and polar‐facing slopes (PFSs) are wetter and colder, than their regional macroclimates. Analyzing Moderate Resolution Imaging Spectroradiometer normalized difference vegetation index from 2003 to 2021, we identified a clear geographic pattern of differences in greenness on the two opposite aspects: EFSs were greener than PFSs in cold areas and were browner in dry areas, mainly determined by the relative importance of limitations of temperature and water. PFSs had stronger greening trends than did EPSs, leading to a weakening difference in greenness between EPSs and PFSs in temperature‐limited areas, and an intensifying difference in water‐limited areas. This suggests the alleviation of temperature limitation and exacerbation of water limitation. Montane ecosystems constitute a “natural laboratory” for deepening our understanding of the temporal evolution of the climatic control of vegetation growth with a space‐for‐time substitution.
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- 2023
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3. Widespread drought‐induced leaf shedding and legacy effects on productivity in European deciduous forests
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Adrià Descals, Aleixandre Verger, Gaofei Yin, Iolanda Filella, and Josep Peñuelas
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Deciduous forests ,drought responses ,early leaf shedding ,european heatwaves ,land surface phenology ,Sentinel‐2 ,Technology ,Ecology ,QH540-549.5 - Abstract
Abstract Heatwaves and droughts are becoming more common and severe in Europe, causing changes in tree phenology, disrupting the sequestration of carbon and causing tree mortality on a continental scale. The responses of leaf shedding to heatwaves and droughts remain uncertain, although temperate deciduous forests may shed their leaves if exposed to extreme heat and water stress. Little information, however, is available about the extent and recurrence of early leaf shedding induced by drought, likely because it occurs in small forest patches and can be discriminated only during a few weeks. We used highly spatiotemporal Sentinel‐2 data as evidence of widespread drought‐induced early leaf shedding in Europe during 2017–2021. We estimated the timing of leaf shedding from NDVI time series and a threshold‐based method that extracts the end of the growing season. Then, we evaluated the heatwave and drought impacts at the end of season by analysing the z‐score of Landsat‐7 and ‐8 land surface temperature and the ERA5‐Land air temperature and aridity index. The 10‐m resolution Sentinel‐2 data identified early leaf shedding not detected by the low‐resolution (250 m) MODIS sensor. Early leaf shedding was observed across Europe during the entire study period and its occurrence was linked to preceding anomalously high temperatures and arid conditions. Our results also indicated that mean summer NDVI decreased significantly in the years following early leaf shedding, suggesting a legacy decline in vegetation productivity. Our study demonstrates that decametric satellite data can be used to monitor the responses of forests to extreme climate events at the canopy level and indicates that early leaf shedding associated with heatwaves and droughts is more widespread and frequent across the continent than previously thought.
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- 2023
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4. Satellite-Detected Contrasting Responses of Canopy Structure and Leaf Physiology to Drought
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Hongfan Gu, Gaofei Yin, Yajie Yang, Aleixandre Verger, Adria Descals, Iolanda Filella, Yelu Zeng, Dalei Hao, Qiaoyun Xie, Xing Li, Jingfeng Xiao, and Josep Penuelas
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Canopy structure ,leaf physiology ,plant photosynthesis ,solar-induced chlorophyll fluorescence (SIF) ,summer drought ,Ocean engineering ,TC1501-1800 ,Geophysics. Cosmic physics ,QC801-809 - Abstract
Disentangling drought impacts on plant photosynthesis is crucial for projecting future terrestrial carbon dynamics. We examined the separate responses of canopy structure and leaf physiology to an extreme summer drought that occurred in 2011 over Southwest China, where the weather was humid and radiation was the main growth-limiting factor. Canopy structure and leaf physiology were, respectively, represented by near-infrared reflectance of vegetation (NIRv) derived from MODIS data and leaf scale fluorescence yield (Φf) derived from both continuous SIF (CSIF) and global OCO-2 SIF (GOSIF). We detected contrasting responses of canopy structure and leaf physiology to drought with a 14.0% increase in NIRv, compared with 12.6 or 19.3% decreases in Φf from CSIF and GOSIF, respectively. The increase in structure resulted in a slight carbon change, due to water deficit-induced physiological constraints. The net ecosystem effect was a 7.5% (CSIF), 1.2% (GOSIF), and −2.96% (EC-LUE GPP) change in photosynthesis. Our study improves understanding of complex vegetation responses of plant photosynthesis to drought and may contribute to the reconciliation of contrasting observed directions in plant responses to drought in cloudy regions via remote sensing.
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- 2023
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5. Photosynthetically Active Radiation and Foliage Clumping Improve Satellite-Based NIRv Estimates of Gross Primary Production
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Iolanda Filella, Adrià Descals, Manuela Balzarolo, Gaofei Yin, Aleixandre Verger, Hongliang Fang, and Josep Peñuelas
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GPP ,clumping index ,NIRv ,photosynthetically active radiation ,evergreen needleleaf forest ,vegetation cover type ,Science - Abstract
Monitoring gross primary production (GPP) is necessary for quantifying the terrestrial carbon balance. The near-infrared reflectance of vegetation (NIRv) has been proven to be a good predictor of GPP. Given that radiation powers photosynthesis, we hypothesized that (i) the addition of photosynthetic photon flux density (PPFD) information to NIRv would improve estimates of GPP and that (ii) a further improvement would be obtained by incorporating the estimates of radiation distribution in the canopy provided by the foliar clumping index (CI). Thus, we used GPP data from FLUXNET sites to test these possible improvements by comparing the performance of a model based solely on NIRv with two other models, one combining NIRv and PPFD and the other combining NIRv, PPFD and the CI of each vegetation cover type. We tested the performance of these models for different types of vegetation cover, at various latitudes and over the different seasons. Our results demonstrate that the addition of daily radiation information and the clumping index for each vegetation cover type to the NIRv improves its ability to estimate GPP. The improvement was related to foliage organization, given that the foliar distribution in the canopy (CI) affects radiation distribution and use and that radiation drives productivity. Evergreen needleleaf forests are the vegetation cover type with the greatest improvement in GPP estimation after the addition of CI information, likely as a result of their greater radiation constraints. Vegetation type was more determinant of the sensitivity to PPFD changes than latitude or seasonality. We advocate for the incorporation of PPFD and CI into NIRv algorithms and GPP models to improve GPP estimates.
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- 2023
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6. A Broadband Green-Red Vegetation Index for Monitoring Gross Primary Production Phenology
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Gaofei Yin, Aleixandre Verger, Adrià Descals, Iolanda Filella, and Josep Peñuelas
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Environmental sciences ,GE1-350 ,Physical geography ,GB3-5030 - Abstract
The chlorophyll/carotenoid index (CCI) is increasingly used for remotely tracking the phenology of photosynthesis. However, CCI is restricted to few satellites incorporating the 531 nm band. This study reveals that the Moderate Resolution Imaging Spectroradiometer (MODIS) broadband green reflectance (band 4) is significantly correlated with this xanthophyll-sensitive narrowband (band 11) (R2=0.98,p
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- 2022
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7. Adaptive responses of animals to climate change are most likely insufficient
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Viktoriia Radchuk, Thomas Reed, Céline Teplitsky, Martijn van de Pol, Anne Charmantier, Christopher Hassall, Peter Adamík, Frank Adriaensen, Markus P. Ahola, Peter Arcese, Jesús Miguel Avilés, Javier Balbontin, Karl S. Berg, Antoni Borras, Sarah Burthe, Jean Clobert, Nina Dehnhard, Florentino de Lope, André A. Dhondt, Niels J. Dingemanse, Hideyuki Doi, Tapio Eeva, Joerns Fickel, Iolanda Filella, Frode Fossøy, Anne E. Goodenough, Stephen J. G. Hall, Bengt Hansson, Michael Harris, Dennis Hasselquist, Thomas Hickler, Jasmin Joshi, Heather Kharouba, Juan Gabriel Martínez, Jean-Baptiste Mihoub, James A. Mills, Mercedes Molina-Morales, Arne Moksnes, Arpat Ozgul, Deseada Parejo, Philippe Pilard, Maud Poisbleau, Francois Rousset, Mark-Oliver Rödel, David Scott, Juan Carlos Senar, Constanti Stefanescu, Bård G. Stokke, Tamotsu Kusano, Maja Tarka, Corey E. Tarwater, Kirsten Thonicke, Jack Thorley, Andreas Wilting, Piotr Tryjanowski, Juha Merilä, Ben C. Sheldon, Anders Pape Møller, Erik Matthysen, Fredric Janzen, F. Stephen Dobson, Marcel E. Visser, Steven R. Beissinger, Alexandre Courtiol, and Stephanie Kramer-Schadt
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Science - Abstract
It is unclear whether species’ responses to climate change tend to be adaptive or sufficient to keep up with climate change. Here, Radchuk et al. perform a meta-analysis showing that in birds phenology has advanced adaptively in some species, though not all the way to the new optima.
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- 2019
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8. A Novel Method to Simultaneously Measure Leaf Gas Exchange and Water Content
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Samuli Junttila, Teemu Hölttä, Yann Salmon, Iolanda Filella, and Josep Peñuelas
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hyperspectral imaging ,spectroscopy ,plant water relations ,leaf water status ,remote sensing ,equivalent water thickness ,Science - Abstract
Understanding the relationship between plant water status and productivity and between plant water status and plant mortality is required to effectively quantify and predict the effects of drought on plants. Plant water status is closely linked to leaf water content that may be estimated using remote sensing technologies. Here, we used an inexpensive miniature hyperspectral spectrometer in the 1550–1950 nm wavelength domain to measure changes in silver birch (Betula pendula Roth) leaf water content combined with leaf gas exchange measurements at a sub-minute time resolution, under increasing vapor pressure deficit, CO2 concentrations, and light intensity within the measurement cuvette; we also developed a novel methodology for calibrating reflectance measurements to predict leaf water content for individual leaves. Based on reflectance at 1550 nm, linear regression modeling explained 98–99% of the variation in leaf water content, with a root mean square error of 0.31–0.43 g cm−2. The prediction accuracy of the model represents a c. ten-fold improvement compared to previous studies that have used destructive sampling measurements of several leaves. This novel methodology allows the study of interlinkages between leaf water content, transpiration, and assimilation at a high time resolution that will increase understanding of the movement of water within plants and between plants and the atmosphere.
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- 2022
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9. Deciphering the Biotic and Climatic Factors That Influence Floral Scents: A Systematic Review of Floral Volatile Emissions
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Gerard Farré-Armengol, Marcos Fernández-Martínez, Iolanda Filella, Robert R. Junker, and Josep Peñuelas
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climate ,floral volatiles ,phylogeny ,pollination syndromes ,terpenoids ,VOC composition ,Plant culture ,SB1-1110 - Abstract
Currently, a global analysis of the information available on the relative composition of the floral scents of a very diverse variety of plant species is missing. Such analysis may reveal general patterns on the distribution and dominance of the volatile compounds that form these mixtures, and may also allow measuring the effects of factors such as the phylogeny, pollination vectors, and climatic conditions on the floral scents of the species. To fill this gap, we compiled published data on the relative compositions and emission rates of volatile organic compounds (VOCs) in the floral scents of 305 plant species from 66 families. We also gathered information on the groups of pollinators that visited the flowers and the climatic conditions in the areas of distribution of these species. This information allowed us to characterize the occurrence and relative abundances of individual volatiles in floral scents and the effects of biotic and climatic factors on floral scent. The monoterpenes trans-β-ocimene and linalool and the benzenoid benzaldehyde were the most abundant floral VOCs, in both ubiquity and predominance in the floral blends. Floral VOC richness and relative composition were moderately preserved traits across the phylogeny. The reliance on different pollinator groups and the climate also had important effects on floral VOC richness, composition, and emission rates of the species. Our results support the hypothesis that key compounds or compounds originating from specific biosynthetic pathways mediate the attraction of the main pollinators. Our results also indicate a prevalence of monoterpenes in the floral blends of plants that grow in drier conditions, which could link with the fact that monoterpene emissions protect plants against oxidative stresses throughout drought periods and their emissions are enhanced under moderate drought stress. Sesquiterpenes, in turn, were positively correlated with mean annual temperature, supporting that sesquiterpene emissions are dominated mainly by ambient temperature. This study is the first to quantitatively summarise data on floral-scent emissions and provides new insights into the biotic and climatic factors that influence floral scents.
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- 2020
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10. Monitoring Spatial and Temporal Variabilities of Gross Primary Production Using MAIAC MODIS Data
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Marcos Fernández-Martínez, Rong Yu, John Gamon, Gabriel Hmimina, Iolanda Filella, Manuela Balzarolo, Benjamin Stocker, and Josep Peñuelas
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GPP ,seasonality ,interannual variability ,trends ,forests ,Science - Abstract
Remotely sensed vegetation indices (RSVIs) can be used to efficiently estimate terrestrial primary productivity across space and time. Terrestrial productivity, however, has many facets (e.g., spatial and temporal variability, including seasonality, interannual variability, and trends), and different vegetation indices may not be equally good at predicting them. Their accuracy in monitoring productivity has been mostly tested in single-ecosystem studies, but their performance in different ecosystems distributed over large areas still needs to be fully explored. To fill this gap, we identified the facets of terrestrial gross primary production (GPP) that could be monitored using RSVIs. We compared the temporal and spatial patterns of four vegetation indices (NDVI, EVI, NIRV, and CCI), derived from the MODIS MAIAC data set and of GPP derived from data from 58 eddy-flux towers in eight ecosystems with different plant functional types (evergreen needle-leaved forest, evergreen broad-leaved forest, deciduous broad-leaved forest, mixed forest, open shrubland, grassland, cropland, and wetland) distributed throughout Europe, covering Mediterranean, temperate, and boreal regions. The RSVIs monitored temporal variability well in most of the ecosystem types, with grasslands and evergreen broad-leaved forests most strongly and weakly correlated with weekly and monthly RSVI data, respectively. The performance of the RSVIs monitoring temporal variability decreased sharply, however, when the seasonal component of the time series was removed, suggesting that the seasonal cycles of both the GPP and RSVI time series were the dominant drivers of their relationships. Removing winter values from the analyses did not affect the results. NDVI and CCI identified the spatial variability of average annual GPP, and all RSVIs identified GPP seasonality well. The RSVI estimates, however, could not estimate the interannual variability of GPP across sites or monitor the trends of GPP. Overall, our results indicate that RSVIs are suitable to track different facets of GPP variability at the local scale, therefore they are reliable sources of GPP monitoring at larger geographical scales.
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- 2019
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11. Characterisation of Functional-Trait Dynamics at High Spatial Resolution in a Mediterranean Forest from Sentinel-2 and Ground-Truth Data
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Santiago Schauman, Aleixandre Verger, Iolanda Filella, and Josep Peñuelas
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Sentinel-2 ,field campaign ,validation ,mediterranean forest ,functional-trait dynamics ,spatial heterogeneity ,Science - Abstract
The characterisation of functional-trait dynamics of vegetation from remotely sensed data complements the structural characterisation of ecosystems. In this study we characterised for the first time the spatial heterogeneity of the intra-annual dynamics of the fraction of absorbed photosynthetically active radiation (FAPAR) as a functional trait of the vegetation in Prades Mediterranean forest in Catalonia, Spain. FAPAR was derived from the Multispectral Instrument (MSI) on the Sentinel-2 satellite and validated by comparison with the ground measurements acquired in June 2017 at the annual peak of vegetation activity. The validation results showed that most of points were distributed along the 1:1 line, with no bias nor scattering: R2 = 0.93, p < 0.05; with a root mean square error of 0.03 FAPAR (4.3%). We classified the study area into nine vegetation groups with different dynamics of FAPAR using a methodology that is objective and repeatable over time. This functional classification based on the annual magnitude (FAPAR-M) and the seasonality (FAPAR-CV) from the data on one year (2016⁻2017) complements structural classifications. The internal heterogeneity of the FAPAR dynamics in each land-cover type is attributed to the environmental and to the specific species composition variability. A spatial autoregressive (SAR) model for the main type of land cover, evergreen holm oak forest (Quercus ilex), indicated that topographic aspect, slope, height, and the topographic aspect x slope interaction accounted for most of the spatial heterogeneity of the functional trait FAPAR-M, thus improving our understanding of the explanatory factors of the annual absorption of photosynthetically active radiation by the vegetation canopy for this ecosystem.
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- 2018
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12. Assessing Ecosystem Isoprene Emissions by Hyperspectral Remote Sensing
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Manuela Balzarolo, Josep Peñuelas, Iolanda Filella, Miguel Portillo-Estrada, and Reinhart Ceulemans
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reflectance ,pigment pools ,xanthophyll ,zeaxanthin ,light use efficiency ,photochemical reflectance index ,Science - Abstract
This study examined the relationship between foliar isoprene emissions, light use efficiency and photochemical reflectance index (PRI) throughout the canopy profile and explored the contribution of xanthophyll cycle pigments versus other carotenoid pigments to the isoprene/PRI relationship. Foliar isoprene emissions within the canopy profile were measured in a high-density poplar plantation in Flanders (Belgium) during the 2016 growing season. The results confirmed that PRI was a promising estimator of isoprene emissions at canopy level. Interestingly, xanthophyll cycle pigments contributed more to isoprene biosynthesis than chlorophyll and drove the isoprene/PRI relationship. The simple independent pigment index and novel defined indices, such as the hyperspectral isoprene index and simple hyperspectral isoprene index, showed promising results and could be suitable estimators of isoprene emissions due to their strong relationship with the xanthophyll pool.
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- 2018
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13. A MODIS Photochemical Reflectance Index (PRI) as an Estimator of Isoprene Emissions in a Temperate Deciduous Forest
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Iolanda Filella, Chao Zhang, Roger Seco, Mark Potosnak, Alex Guenther, Thomas Karl, John Gamon, Stephen Pallardy, Lianhong Gu, Saewung Kim, Manuela Balzarolo, Marcos Fernandez-Martinez, and Josep Penuelas
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drought ,GPP ,isoprene ,LUE ,MEGAN ,MODIS ,PRI ,photorespiration ,reducing power ,substrate availability ,Science - Abstract
The quantification of isoprene and monoterpene emissions at the ecosystem level with available models and field measurements is not entirely satisfactory. Remote-sensing techniques can extend the spatial and temporal assessment of isoprenoid fluxes. Detecting the exchange of biogenic volatile organic compounds (BVOCs) using these techniques is, however, a very challenging goal. Recent evidence suggests that a simple remotely sensed index, the photochemical reflectance index (PRI), which is indicative of light-use efficiency, relative pigment levels and excess reducing power, is a good indirect estimator of foliar isoprenoid emissions. We tested the ability of PRI to assess isoprenoid fluxes in a temperate deciduous forest in central USA throughout the entire growing season and under moderate and extreme drought conditions. We compared PRI time series calculated with MODIS bands to isoprene emissions measured with eddy covariance. MODIS PRI was correlated with isoprene emissions for most of the season, until emissions peaked. MODIS PRI was also able to detect the timing of the annual peak of emissions, even when it was advanced in response to drought conditions. PRI is thus a promising index to estimate isoprene emissions when it is complemented by information on potential emission. It may also be used to further improve models of isoprene emission under drought and other stress conditions. Direct estimation of isoprene emission by PRI is, however, limited, because PRI estimates LUE, and the relationship between LUE and isoprene emissions can be modified by severe stress conditions.
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- 2018
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14. Females of the specialist butterfly Euphydryas aurinia (Lepidoptera: Nymphalinae: Melitaeini) select the greenest leaves of Lonicera implexa (Caprifoliaceae) for oviposition
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Constantí STEFANESCU, Josep PEÑUELAS, Jordi SARDANS, and Iolanda FILELLA
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lepidoptera ,nymphalinae ,euphydryas aurinia ,lonicera implexa ,insect-plant interaction ,oviposition cues ,plant size ,foliar chlorophyll concentration ,spectral reflectance ,mediterranean area ,Zoology ,QL1-991 - Abstract
In Mediterranean habitats, the specialist butterfly Euphydryas aurinia oviposits on Lonicera implexa. Previous work has shown that ovipositing females select and lay a higher number of egg clusters on certain plants. In this paper the results of a field study aimed at assessing whether females use plant size and/or plant or leaf greenness (i.e., chlorophyll concentrations) as cues for oviposition are described. Size of plants did not appear to be an important factor in determining host plant selection, probably because even small plants provide enough resources for the young larvae to reach the diapausing stage and because last instar larvae, the most likely to face resource depletion, can move great distances in search of food. Measurements of both spectral reflectance and chlorophyll concentration of plants failed to reveal differences between host and non-host plants. On the other hand, reflectance and chlorophyll concentration of leaves were found to be important in oviposition choice as egg clusters were generally located on the greenest leaves with the highest chlorophyll contents. This suggests that females use visual cues to select the leaves that will provide optimal growth opportunities for newly hatched larvae. Although there was some indication that plants receiving a greater number of egg clusters also had more leaves of high chlorophyll content, multiple egg batches on single plants could also be a consequence of females being attracted by the presence of conspecific egg clusters.
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- 2006
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15. Photochemical Reflectance Index (PRI) for Detecting Responses of Diurnal and Seasonal Photosynthetic Activity to Experimental Drought and Warming in a Mediterranean Shrubland
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Chao Zhang, Iolanda Filella, Daijun Liu, Romà Ogaya, Joan Llusià, Dolores Asensio, and Josep Peñuelas
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drought ,evergreen ,midday depression ,photochemical reflectance index (PRI) ,photosynthesis ,remote sensing ,warming ,water index (WI) ,Science - Abstract
Climatic warming and drying are having profound impacts on terrestrial carbon cycling by altering plant physiological traits and photosynthetic processes, particularly for species in the semi-arid Mediterranean ecosystems. More effective methods of remote sensing are needed to accurately assess the physiological responses and seasonal photosynthetic activities of evergreen species to climate change. We evaluated the stand reflectance in parallel to the diurnal and seasonal changes in gas exchange, fluorescence and water contents of leaves and soil for a Mediterranean evergreen shrub, Erica multiflora, submitted to long-term experimental warming and drought. We also calculated a differential photochemical reflectance index (ΔPRI, morning PRI subtracted from midday PRI) to assess the diurnal responses of photosynthesis (ΔA) to warming and drought. The results indicated that the PRI, but not the normalized difference vegetation index (NDVI), was able to assess the seasonal changes of photosynthesis. Changes in water index (WI) were consistent with seasonal foliar water content (WC). In the warming treatment, ΔA value was higher than control in winter but ΔYield was significantly lower in both summer and autumn, demonstrating the positive effect of the warming on the photosynthesis in winter and the negative effect in summer and autumn, i.e., increased photosynthetic midday depression in summer and autumn, when temperatures were much higher than in winter. Drought treatment increased the midday depression of photosynthesis in summer. Importantly, ΔPRI was significantly correlated with ΔA both under warming and drought, indicating the applicability of ΔPRI for tracking the midday depression of photosynthetic processes. Using PRI and ΔPRI to monitor the variability in photosynthesis could provide a simple method to remotely sense photosynthetic seasonality and midday depression in response to ongoing and future environmental stresses.
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- 2017
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16. β-Ocimene, a Key Floral and Foliar Volatile Involved in Multiple Interactions between Plants and Other Organisms
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Gerard Farré-Armengol, Iolanda Filella, Joan Llusià, and Josep Peñuelas
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trans-β-ocimene ,(E)-β-ocimene ,floral scent ,dominant VOCs ,Organic chemistry ,QD241-441 - Abstract
β-Ocimene is a very common plant volatile released in important amounts from the leaves and flowers of many plant species. This acyclic monoterpene can play several biological functions in plants, by potentially affecting floral visitors and also by mediating defensive responses to herbivory. The ubiquity and high relative abundance of β-ocimene in the floral scents of species from most plant families and from different pollination syndromes (ranging from generalism to specialism) strongly suggest that this terpenoid may play an important role in the attraction of pollinators to flowers. We compiled abundant evidence from published studies that supports β-ocimene as a generalist attractant of a wide spectrum of pollinators. We found no studies testing behavioural responses of pollinators to β-ocimene, that could directly demonstrate or deny the function of β-ocimene in pollinator attraction; but several case studies support that the emissions of β-ocimene in flowers of different species follow marked temporal and spatial patterns of emission, which are typical from floral volatile organic compound (VOC) emissions that are involved in pollinator attraction. Furthermore, important β-ocimene emissions are induced from vegetative plant tissues after herbivory in many species, which have relevant functions in the establishment of tritrophic interactions. We thus conclude that β-ocimene is a key plant volatile with multiple relevant functions in plants, depending on the organ and the time of emission. Experimental behavioural studies on pure β-ocimene conducted with pollinating insects will be necessary to prove the assumptions made here.
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- 2017
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17. Affecting Factors and Recent Improvements of the Photochemical Reflectance Index (PRI) for Remotely Sensing Foliar, Canopy and Ecosystemic Radiation-Use Efficiencies
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Chao Zhang, Iolanda Filella, Martín F. Garbulsky, and Josep Peñuelas
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gross primary productivity (GPP) ,radiation-use efficiency (RUE) ,photochemical reflectance index (PRI) ,affecting factors ,spatiotemporal scales ,Science - Abstract
Accurately assessing terrestrial gross primary productivity (GPP) is crucial for characterizing the climate-carbon cycle. Remotely sensing the photochemical reflectance index (PRI) across vegetation functional types and spatiotemporal scales has received increasing attention for monitoring photosynthetic performance and simulating GPP over the last two decades. The factors confounding PRI variation, especially on long timescales, however, require the improvement of PRI understanding to generalize its use for estimating carbon uptake. In this review, we summarize the most recent publications that have reported the factors affecting PRI variation across diurnal and seasonal scales at foliar, canopy and ecosystemic levels; synthesize the reported correlations between PRI and ecophysiological variables, particularly with radiation-use efficiency (RUE) and net carbon uptake; and analyze the improvements in PRI implementation. Long-term variation of PRI could be attributed to changes in the size of constitutive pigment pools instead of xanthophyll de-epoxidation, which controls the facultative short-term changes in PRI. Structural changes at canopy and ecosystemic levels can also affect PRI variation. Our review of the scientific literature on PRI suggests that PRI is a good proxy of photosynthetic efficiency at different spatial and temporal scales. Correcting PRI by decreasing the influence of physical or physiological factors on PRI greatly strengthens the relationships between PRI and RUE and GPP. Combining PRI with solar-induced fluorescence (SIF) and optical indices for green biomass offers additional prospects.
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- 2016
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18. Divergent Performances of Vegetation Indices in Extracting Photosynthetic Phenology for Northern Deciduous Broadleaf Forests.
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Yajie Yang, Rui Chen, Gaofei Yin, Cong Wang, Guoxiang Liu 0001, Aleixandre Verger, Adrià Descals, Iolanda Filella, and Josep Peñuelas
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- 2022
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19. Land surface phenology from Copernicus Global Land time series.
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Kevin Bórnez, Aleixandre Verger, Iolanda Filella, and Josep Penuelas
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- 2017
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20. Radiation‐constrained boundaries cause nonuniform responses of the carbon uptake phenology to climatic warming in the Northern Hemisphere
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Adrià Descals, Aleixandre Verger, Gaofei Yin, Iolanda Filella, Yongshuo H. Fu, Shilong Piao, Ivan A. Janssens, and Josep Peñuelas
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Chemistry ,Global and Planetary Change ,Ecology ,Climate Change ,Temperature ,Environmental Chemistry ,Seasons ,Forests ,Tundra ,Biology ,Ecosystem ,Carbon ,General Environmental Science - Abstract
Climatic warming has lengthened the photosynthetically active season in recent decades, thus affecting the functioning and biogeochemistry of ecosystems, the global carbon cycle and climate. Temperature response of carbon uptake phenology varies spatially and temporally, even within species, and daily total intensity of radiation may play a role. We empirically modelled the thresholds of temperature and radiation under which daily carbon uptake is constrained in the temperate and cold regions of the Northern Hemisphere, which include temperate forests, boreal forests, alpine and tundra biomes. The two-dimensionality of the temperature-radiation constraint was reduced to one single variable, theta, which represents the angle in a polar coordinate system for the temperature-radiation observations during the start and end of the growing season. We found that radiation will constrain the trend towards longer growing seasons with future warming but differently during the start and end of season and depending on the biome type and region. We revealed that radiation is a major factor limiting photosynthetic activity that constrains the phenology response to temperature during the end-of-season. In contrast, the start of the carbon uptake is overall highly sensitive to temperature but not constrained by radiation at the hemispheric scale. This study thus revealed that while at the end-of-season the phenology response to warming is constrained at the hemispheric scale, at the start-of-season the advance of spring onset may continue, even if it is at a slower pace.
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- 2022
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21. Linking OMI HCHO and MODIS PRI satellite data with BVOCS emissions in NE Spain.
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Shawn C. Kefauver, Iolanda Filella, Chao Zhang 0006, and Josep Penuelas
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- 2015
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22. Vegetation optical depth reveals changes in ecosystem-level water stress for global forests
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0000-0002-7215-0150, Samuli Junttila, Adrià Descals, Iolanda Filella, Josep Peñuelas, Martin Brandt, Jean-Pierre Wigneron, Mikko Vastaranta, 0000-0002-7215-0150, Samuli Junttila, Adrià Descals, Iolanda Filella, Josep Peñuelas, Martin Brandt, Jean-Pierre Wigneron, and Mikko Vastaranta
- Abstract
Plant water stress due to climate change is posing a threat to various ecosystem services such as carbon sequestration, food and wood production, and climate regulation. To address this issue, methods are needed to assess and monitor plant water stress at various spatial and temporal scales. Passive microwave emission observations from satellites have proven useful in monitoring changes in vegetation water content and assessing plant water stress at a low spatial resolution (> 9 km). In this study, we used vegetation optical depth (VOD) and measurements of hydraulic vulnerability to create a novel model for assessing ecosystem-level water stress. We used L-band VOD and global measurements of xylem water potential at 88% loss of stem hydraulic conductivity (P88) from the TRY database (including 1103 measurements of P88 from 463 species and nine different vegetation biomes) to create a linear regression model between L-band VOD and biomelevel P88. We used monthly mean values of L-band VOD and calculated ratios of yearly minimum and maximum VOD (L-VODmin/max) for each pixel to describe average variability in ecosystem-level water content. The developed L-VODmin/max metric explained 75% of the variation in P88 at the biome level (R 2 =0.75) indicating that the novel L-VODmin/max metric is capable of capturing changes in plant water status. We then used the L-VODmin/max metric and daily climate data from the ERA5 to see if water stress has increased over time in the world's forests that are more water limited (aridity index below 1.5). For these areas, we found a positive trend in maximum daily vapour pressure deficit, which correlated negatively (p<0.05) with L-VODmin/max trend for the same time period further confirming that L-VODmin/max is capable of explaining differences in plant water status. Additionally, we examined the trend in L-VODmin/max for global forests for the same 2011-2020 period and found a significant negative trend (increasing water stress, p<0.05) f
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- 2023
23. Vegetation optical depth reveals changes in ecosystem-level water stress for global forests
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Samuli Junttila, Adrià Descals, Iolanda Filella, Josep Peñuelas, Martin Brandt, Jean-Pierre Wigneron, and Mikko Vastaranta
- Abstract
Plant water stress due to climate change is posing a threat to various ecosystem services such as carbon sequestration, food and wood production, and climate regulation. To address this issue, methods are needed to assess and monitor plant water stress at various spatial and temporal scales. Passive microwave emission observations from satellites have proven useful in monitoring changes in vegetation water content and assessing plant water stress at a low spatial resolution (> 9 km). In this study, we used vegetation optical depth (VOD) and measurements of hydraulic vulnerability to create a novel model for assessing ecosystem-level water stress. We used L-band VOD and global measurements of xylem water potential at 88% loss of stem hydraulic conductivity (P88) from the TRY database (including 1103 measurements of P88 from 463 species and nine different vegetation biomes) to create a linear regression model between L-band VOD and biome-level P88. We used monthly mean values of L-band VOD and calculated ratios of yearly minimum and maximum VOD (L-VODmin/max) for each pixel to describe average variability in ecosystem-level water content. The developed L-VODmin/max metric explained 75% of the variation in P88 at the biome level (R2=0.75) indicating that the novel L-VODmin/max metric is capable of capturing changes in plant water status. We then used the L-VODmin/max metric and daily climate data from the ERA5 to see if water stress has increased over time in the world's forests that are more water limited (aridity index below 1.5). For these areas, we found a positive trend in maximum daily vapour pressure deficit, which correlated negatively (p
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- 2023
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24. Analyzing the effect of the duration of soil warming on subarctic grasslands using high-resolution multispectral images
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Amir Hamedpour, Bjarni D. Sigurdsson, Josep Peñuelas, Iolanda Filella, Hafsteinn Einarsson, Steven Latré, and Tryggvi Stefánsson
- Abstract
Climate change is causing rapid changes in sub-Arctic and Arctic terrestrial ecosystems compared to the other biomes. As these ecosystems are so sensitive to climate change, more research on how the rising of temperature affects these ecosystems is essential.This study is implemented in the ForHot research site located in Iceland encompassing geothermally heated natural grasslands. This research site contains two areas, one that has been warmed geothermally for over 60 years (long-term warming; LTW) and the other since 2008 (medium-term warming; MTW). The LTW area contains 24 plots and the MTW contains 30 plots, with the mean annual soil temperature ranging between 5 to 21 °C for LTW and 6 to 46 °C for MTW in 2022. The main goal of this study was to understand how the warming level and the duration of warming (MTW vs. LTW) have affected the average seasonal Normalized Difference Vegetation Index (NDVI) during 2022.For this study, we repeatedly collected high-resolution multispectral data using Micasense dual camera system and DJI Matrice 600 drone each month from April 2022 to October 2022 as well as soil temperature data of each plot, and some other parameters such as precipitation, air temperature, wind speed, and soil water content.Here we present the results on how the warming level and the duration of warming affected the monthly and seasonal average NDVI in the MTW and LTW grassland ecosystems.
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- 2023
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25. Long and medium-term interannual assessment of sub-Arctic grassland aboveground biomass at different soil warming levels
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Ruth P. Tchana Wandji, Niki Leblans, Niel Verbrigghe, Iolanda Filella, Peter Lootens, Agathe Merand, Ivan Janssens, and Bjarni D. Sigurdsson
- Abstract
Climate change affects ecosystems considerably worldwide, but as warming is happening at an accelerated pace at higher latitudes, it is essential to study how warming affects ecosystem structure and function in Arctic and sub-Arctic ecosystems.In this research, we looked at changes in the aboveground biomass (AGB) of two Icelandic sub-Arctic grasslands located at the ForHot site. The ForHot site is an exceptional studying site where the soils are naturally warmed. Thus, making it an important natural laboratory to assess and learn more about the long-term effect of global warming. At the research site, one grassland ecosystem has soils that have been warmed for over 60 years (long-term warming; LTW) and the other since 2008 (medium-term warming; MTW), when an earthquake disrupted geothermal channels in the underlying bedrock. Fifty permanent survey plots were established in the autumn of 2012 along the two grassland soil temperature gradients (ranging from 0 to +18°C).We assessed how vegetation structure (non-vascular; AGBnon-vasc and vascular plants; AGBvasc) and the ecosystem's maximum aboveground total biomass(AGBtot) were affected by different levels of soil warming over multiple studied years (i.e. 2013, 2016, 2018, 2020, 2021 and 2022).Our preliminary results showed unexpectedly relatively small changes in AGBtot with warming. We hypothesise that changes in AGBvasc would typically induce opposite changes in AGBnon-vasc, probably because of light competition. When looking separately at the vegetation structures, for AGBvasc, the duration of soil warming induced contrasted responses between MTW and LTW grasslands. That is, in the MTW grassland, there were no changes for most years (p > .05) and strong negative responses (p < .05) with warming in seasonally maximum AGBvasc for other years. Whereas in the LTW grassland, warming generally increased AGB for most years (p < .05), and also a strong negative response as observed in the MTW for the respective years despite statistically not significant. This strong negative response could be because of untypically high AGB production in control (unwarmed) plots during those years and less positive reactions with different levels of soil warming. We will show some potential drivers (environmental variables) for those unexpected temporal variations in the warming response. AGBnon-vasc, such as lichens and mosses, have an unclear pattern across the soil warming gradient in both grassland ecosystems.
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- 2023
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26. Nonlinear Thermal Responses Outweigh Water Limitation in the Attenuated Effect of Climatic Warming on Photosynthesis in Northern Ecosystems
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Gaofei Yin, Aleixandre Verger, Adrià Descals, Iolanda Filella, Josep Peñuelas, Sichuan Provincial Department of Science and Technology, National Natural Science Foundation of China, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Generalitat de Catalunya, Fundación Ramón Areces, and Consejo Superior de Investigaciones Científicas (España)
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Geophysics ,General Earth and Planetary Sciences - Abstract
Plant photosynthesis is strongly limited by temperature at high northern latitudes. The temperature sensitivity of plant photosynthesis in scenarios of future climatic warming, however, is highly uncertain. We used sun-induced fluorescence—a satellite proxy for plant photosynthesis—to analyze the spatiotemporal response of photosynthesis to temperature at high northern latitudes. We detected a widespread decline in the sensitivity of photosynthesis to temperature during the last two decades: 3.25 versus 2.19%/°C, in the 2000s and 2010s, respectively. We used methods of machine learning and temporal composition to characterize the contribution of nonlinear thermal responses and water limitation. Both methods consistently identified the nonlinear thermal responses as the main driver of the attenuated positive warming effect. We highlighted the traditionally temperature-limited ecosystems at high northern latitudes may be approaching the temperature tipping point, beyond which the warming effect on plant photosynthesis would transition from positive to negative., This research was financially supported by the Sichuan Science and Technology Program 2021JDJQ0007 and 2020JDTD0003, the National Natural Science Foundation of China 41971282, the Spanish Government project PID2019-110521GB-I00, the Catalan government projects SGR2017-1005 and 2020PANDE00117, and the Fundación Ramón Areces project ELEMENTAL-CLIMATE. This work represents a contribution to the CSIC-PTI TELEDETECT.
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- 2022
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27. Amazonian biogenic volatile organic compounds under global change
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Joan Llusià, Ana Maria Yáñez-Serrano, Jonathan Williams, Eliane G. Alves, J. Kesselmeier, Paulo Artaxo, Josep Peñuelas, Katerina Sindelarova, Jana Doubalova, Trissevgeni Stavrakou, Efstratios Bourtsoukidis, Iolanda Filella, Alex Guenther, and Maite Bauwens
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0106 biological sciences ,Land cover ,010504 meteorology & atmospheric sciences ,Climate Change ,Climate ,Amazonian ,Climate change ,Forests ,Atmospheric sciences ,010603 evolutionary biology ,01 natural sciences ,Amazonia ,Deforestation ,Forest ecology ,Environmental Chemistry ,Ecosystem ,Global change ,Ecological interactions ,0105 earth and related environmental sciences ,General Environmental Science ,Biogenic volatile organic compounds ,Volatile Organic Compounds ,Global and Planetary Change ,Biomass (ecology) ,Ecology ,Depositional processes ,15. Life on land ,Air chemistry ,13. Climate action ,Atmospheric chemistry ,Land use ,Environmental science ,Seasons ,AEROSSOL - Abstract
Biogenic volatile organic compounds (BVOCs) play important roles at cellular, foliar, ecosystem and atmospheric levels. The Amazonian rainforest represents one of the major global sources of BVOCs, so its study is essential for understanding BVOC dynamics. It also provides insights into the role of such large and biodiverse forest ecosystem in regional and global atmospheric chemistry and climate. We review the current information on Amazonian BVOCs and identify future research priorities exploring biogenic emissions and drivers, ecological interactions, atmospheric impacts, depositional processes and modifications to BVOC dynamics due to changes in climate and land cover. A feedback loop between Amazonian BVOCs and the trends of climate and land-use changes in Amazonia is then constructed. Satellite observations and model simulation time series demonstrate the validity of the proposed loop showing a combined effect of climate change and deforestation on BVOC emission in Amazonia. A decreasing trend of isoprene during the wet season, most likely due to forest biomass loss, and an increasing trend of the sesquiterpene to isoprene ratio during the dry season suggest increasing temperature stress-induced emissions due to climate change.
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- 2020
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28. Complex spatiotemporal phenological shifts as a response to rainfall changes
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Laura Llorens, Marc Estiarte, Pere Comas, Xiaoyang Zhang, Francisco Lloret, Iolanda Filella, Romà Ogaya, Josep Peñuelas, and Jaume Terradas
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Mediterranean climate ,geography ,geography.geographical_feature_category ,Physiology ,Phenology ,Ecology ,Growing season ,Climate change ,Plant Science ,Vegetation ,Shrubland ,Peninsula ,Environmental science ,Ecosystem ,Physical geography - Abstract
Summary • Climatic warming produces significant gradual alterations in the timing of life-cycle events, and here we study the phenological effects of rainfall-pattern changes. • We conducted ecosystem field experiments that partially excluded rain and runoff during the growing season in a Mediterranean forest and in a mediterranean shrubland. Studies of time-series of leaf-unfolding, flowering and fruiting over the last 50 yr in central Catalonia were carried out, and greenup onset in the Iberian Peninsula was monitored by satellite images. • Experimental, historical and geographical changes in rainfall produced significant, complex and strongly species-specific, as well as spatially and temporally variable, phenological effects. Among these changes, it was found that in the Iberian Peninsula, greenup onset changes from spring (triggered by rising temperatures) in the northern cool-wet regions to autumn (triggered by the arrival of autumn rainfalls) in the southern warm-dry regions. Even in the mesic Mediterranean central Catalonia (NE of the peninsula) rainfall had a stronger relative influence than temperature on fruiting phenology. • The results show that changes in rainfall and water availability, an important driver of climate change, can cause complex phenological changes with likely far-reaching consequences for ecosystem and biosphere functioning and structure. The seasonal shift in the Iberian Peninsula further highlights this importance and indicates that vegetation may respond to climate change not only with gradual, but also with abrupt temporal and spatial, changes in the timing of greenup onset.
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- 2021
29. Assessing ecosystem isoprene emissions by hyperspectral remote sensing
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Miguel Portillo-Estrada, Reinhart Ceulemans, Iolanda Filella, Josep Peñuelas, and Manuela Balzarolo
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0106 biological sciences ,Canopy ,010504 meteorology & atmospheric sciences ,reflectance ,Economics ,Zeaxanthin ,Science ,Growing season ,Reflectance ,Photochemical Reflectance Index ,Atmospheric sciences ,01 natural sciences ,photochemical reflectance index ,chemistry.chemical_compound ,Reflectance index ,xanthophyll ,light use efficiency ,Biology ,Carotenoid ,Isoprene ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Light use efficiency ,Photochemical ,Xanthophyll ,zeaxanthin ,chemistry ,Chlorophyll ,General Earth and Planetary Sciences ,Environmental science ,Pigment pools ,pigment pools ,010606 plant biology & botany - Abstract
This study examined the relationship between foliar isoprene emissions, light use efficiency and photochemical reflectance index (PRI) throughout the canopy profile and explored the contribution of xanthophyll cycle pigments versus other carotenoid pigments to the isoprene/PRI relationship. Foliar isoprene emissions within the canopy profile were measured in a high-density poplar plantation in Flanders (Belgium) during the 2016 growing season. The results confirmed that PRI was a promising estimator of isoprene emissions at canopy level. Interestingly, xanthophyll cycle pigments contributed more to isoprene biosynthesis than chlorophyll and drove the isoprene/PRI relationship. The simple independent pigment index and novel defined indices, such as the hyperspectral isoprene index and simple hyperspectral isoprene index, showed promising results and could be suitable estimators of isoprene emissions due to their strong relationship with the xanthophyll pool.
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- 2021
30. GLOVOCs - Master compound assignment guide for proton transfer reaction mass spectrometry users
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Iolanda Filella, Albert Gargallo-Garriga, J. A. de Gouw, Joan Llusià, Josep Peñuelas, Roger Seco, Luca Cappellin, Jonathan Williams, Efstratios Bourtsoukidis, Christiane Werner, Víctor Granda, and Ana Maria Yáñez-Serrano
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Atmospheric Science ,Compound assignment ,PTR-MS ,PTR-TOF-MS ,Quadrupole ,Time of flight ,VOC ,010504 meteorology & atmospheric sciences ,Computer science ,010501 environmental sciences ,Mass spectrometry ,01 natural sciences ,Identification (information) ,Ptr tof ms ,PTR-MSPTR-TOF-MS ,Biochemical engineering ,Proton-transfer-reaction mass spectrometry ,0105 earth and related environmental sciences ,General Environmental Science - Abstract
Altres ajuts: AMYS acknowledges the Spanish Ministry of Education and Science for her Juan de la Cierva-Incorporación grant. CW acknowledges the ERC consolidator grant VOCO2 (647008) The richness of measurements obtained by Proton-Transfer Reactions Mass Spectrometry (PTR-MS) has opened a new paradigm for the quantification of volatile organic compounds (VOCs). A wide range of compounds can be monitored, however, each detected signal is subject to a compound assignment instead of actual identification because PTR techniques are mass-selective and isomers cannot be separately measured. Thus, rapid development in the field requests continued community efforts to identify compounds. In this study we have reviewed the available literature and created a master compound assignment guide called GLOVOCS that can be referred to by PTR-MS practitioners. GLOVOCS is aimed to help in advancing science of VOCs by facilitating the research of multiple groups using PTR-MS to monitor VOCs and to disentangle the physical, chemical and biological mechanisms underlying their production, emission and impact on environment and organisms from bacteria to humans. The guide is freely accessible at http://glovocs.creaf.cat as a collaborative tool, where users can both consult and contribute to the identification of VOCs by providing possible candidates for all chemical formulas from 18 to 330 atomic mass units. When available, we indicate if there is evidence for biogenic or anthropogenic VOC origin, as well as grouping the compounds based on the Classyfire chemotaxonomic classification (Djoumbou Feunang et al., 2016). While GLOVOCS aims to facilitate the first assessment and consistent classification of compounds, we highly recommend further cross-validation for verifying compounds when using PTR-MS techniques.
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- 2021
31. Vegetation baseline phenology from kilometric global LAI satellite products
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Iolanda Filella, Josep Peñuelas, Aleixandre Verger, Frédéric Baret, Environnement Méditerranéen et Modélisation des Agro-Hydrosystèmes (EMMAH), Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre de Recerca Ecològica i Aplicacions Forestals (CREAF), Global Ecology Unit, and Spanish National Research Council (CSIC)
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010504 meteorology & atmospheric sciences ,[SDE.MCG]Environmental Sciences/Global Changes ,Biome ,0211 other engineering and technologies ,Soil Science ,02 engineering and technology ,Land cover ,01 natural sciences ,Normalized Difference Vegetation Index ,SPOT-VEGETATION ,[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing ,Climatic drivers ,medicine ,Climatic ,Mean annual seasonal cycle ,Computers in Earth Sciences ,Leaf area index ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing ,Phenology ,Geology ,Vegetation ,drivers ,15. Life on land ,Seasonality ,medicine.disease ,Leaf ,MODIS ,Ground observations ,13. Climate action ,Climatology ,[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV] ,Spatial ecology ,Environmental science ,area index ,Climatology of land surface phenology - Abstract
Land surface phenology derived from remotely sensed satellite data can substantially improve our macroecological knowledge and the representation of phenology in earth system models. We characterized the baseline phenology of the vegetation at the global scale from the GEOCLIM climatology of leaf area index (LAI) estimated from 1-km SPOT-VEGETATION time series for 1999-2010. The phenological metrics were calibrated over an ensemble of ground observations of the timing of leaf unfolding and autumnal colouring of leaves. The start and end of season were best identified using respectively 30% and 40% threshold of LAI amplitude values. The accuracy of the derived phenological metrics, evaluated using available ground observations for birch forests over Europe (and lilac shrubs over North America), improved as compared to those derived from MODIS-EVI and produced an overall root mean square error of 7 days (19 days) for the timing of the start of season, 15 for the end of season, and 16 for the length of season. The spatial patterns of the derived LAI phenology agreed well with those from MODIS-EVI and -NDVI, although the timing of the start, end, and length of season differed by about one month at the global scale, with higher uncertainties in areas of limited seasonality of the satellite signal and systematic biases due to the differences in the methodologies and datasets. The baseline LAI phenology was spatially consistent with the global distributions of climatic drivers and biome land cover.
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- 2021
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32. Divergent estimates of forest photosynthetic phenology using structural and physiological vegetation indices
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Gaofei Yin, Adrià Descals, Iolanda Filella, Aleixandre Verger, and Josep Peñuelas
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,AIAC ,Ecology ,Phenology ,Physiology ,Structure ,15. Life on land ,Photosynthetic phenology ,Photosynthesis ,01 natural sciences ,Geophysics ,Vegetation index ,medicine ,General Earth and Planetary Sciences ,Environmental science ,Vegetation Index ,medicine.symptom ,Vegetation (pathology) ,010606 plant biology & botany ,0105 earth and related environmental sciences - Abstract
The accurate estimation of photosynthetic phenology using vegetation indices (VIs) is important for measuring the interannual variation of atmospheric CO2 concentrations, but the relative performances of structural and physiological VIs remain unclear. We found that structural VIs (normalized difference VI, enhanced VI, and near-infrared reflectance of vegetation) were suitable for estimating the start of the photosynthetically active season in deciduous broadleaf forests using gross primary production measured by FLUXNET as a benchmark, and a physiological VI (chlorophyll/carotenoid index) was better at identifying the end of the photosynthetically active season for deciduous broadleaf forests and both the start and end of season for evergreen needleleaf forests. The divergent performances were rooted in the combined control of structural and physiological regulations of carbon uptake by plants. Most existing studies of photosynthetic phenology have been based on structural VIs, so we suggest revisiting the dynamics of photosynthetic phenology using physiological VIs, which has significant implications on global plant phenology and carbon uptake studies.
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- 2021
33. Dynamics of volatile organic compounds in a western Mediterranean oak forest
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Iolanda Filella, David Bartolomé-Català, Albert Bach, Ana Maria Yáñez-Serrano, Joan Llusià, Roger Seco, Josep Peñuelas, and Vasileios N. Matthaios
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Mediterranean climate ,Atmospheric Science ,Tree canopy ,Ozone ,Biogenic and anthropogenic VOC interaction ,010504 meteorology & atmospheric sciences ,Biogenic emissions ,010501 environmental sciences ,01 natural sciences ,chemistry.chemical_compound ,chemistry ,Positive matrix factorization ,Environmental chemistry ,Forest ecology ,Environmental science ,Oak forest ,Volatile organic compounds ,Montseny Natural Park ,Diel vertical migration ,Proton-transfer-reaction mass spectrometry ,0105 earth and related environmental sciences ,General Environmental Science - Abstract
Volatile organic compounds (VOCs) are emitted from many sources and have important implications for plant fitness, ecological interactions, and atmospheric processes, including photochemistry and ozone formation. Forest ecosystems are strong sources of biogenic VOCs. We aimed to characterize forest below-canopy VOC mixing ratios, monitored by Proton Transfer Reaction Mass Spectrometry (PTR-MS), at Montseny Natural Park, a Mediterranean forest 50 km from the Barcelona urban area. Measurements were taken every 2 min during six months around the maximum emission period of summer. All VOCs had diel cycles with higher mixing ratios during the day, but different patterns over time. Monitored VOCs were grouped as biogenic, oxygenated, or aromatic compounds. Additionally, a positive matrix factorization analysis identified four emission profiles that were attributed to photochemical VOC production, biogenic emissions, mixed VOC emission sources, and traffic emissions. Even though the biogenic source was the strongest source profile at the site, we found a strong influence of anthropogenic air masses infiltrating the forest canopy and altering the biogenic air masses at the site., AMYS, JP, IF, and JL acknowledge funding provided by the Spanish Government grant PID2019-110521GB-I00, the European Research Council Synergy grant ERC-SyG-2013-610028 IMBALANCE-P, and the Catalan Government grant SGR 2017-1005. AMYS also acknowledges the Spanish Ministry of Education and Science for her Juan de la Cierva-Incorporación grant. We would like to especially thank Joana Barber and Daniel Guinart from the Biosphere Reserve of Montseny Natural Park for allowing us to use the park facilities for the study.
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- 2021
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34. β-Ocimene, a key floral and foliar volatile involved in multiple interactions between plants and other organisms
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Josep Peñuelas, Iolanda Filella, Gerard Farré-Armengol, and Joan Llusià
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0106 biological sciences ,Pollination ,Acyclic Monoterpenes ,Pharmaceutical Science ,Review ,Flowers ,Alkenes ,Biology ,Generalist and specialist species ,010603 evolutionary biology ,01 natural sciences ,trans-β-ocimene ,Analytical Chemistry ,lcsh:QD241-441 ,Ocimene ,chemistry.chemical_compound ,lcsh:Organic chemistry ,Pollinator ,Drug Discovery ,Botany ,Dominant VOCs ,dominant VOCs ,Animals ,Physical and Theoretical Chemistry ,Trans-β-ocimene ,Relative species abundance ,floral scent ,Volatile Organic Compounds ,Herbivore ,Ecology ,Organic Chemistry ,(E)-β-ocimene ,Plants ,15. Life on land ,Attraction ,trans--ocimene ,chemistry ,Chemistry (miscellaneous) ,(E)--ocimene ,Molecular Medicine ,Floral scent ,Function (biology) ,010606 plant biology & botany - Abstract
Ocimene is a very common plant volatile released in important amounts from the leaves and flowers of many plant species. This acyclic monoterpene can play several biological functions in plants, by potentially affecting floral visitors and also by mediating defensive responses to herbivory. The ubiquity and high relative abundance of -ocimene in the floral scents of species from most plant families and from different pollination syndromes (ranging from generalism to specialism) strongly suggest that this terpenoid may play an important role in the attraction of pollinators to flowers. We compiled abundant evidence from published studies that supports -ocimene as a generalist attractant of a wide spectrum of pollinators. We found no studies testing behavioural responses of pollinators to -ocimene, that could directly demonstrate or deny the function of -ocimene in pollinator attraction; but several case studies support that the emissions of -ocimene in flowers of different species follow marked temporal and spatial patterns of emission, which are typical from floral volatile organic compound (VOC) emissions that are involved in pollinator attraction. Furthermore, important -ocimene emissions are induced from vegetative plant tissues after herbivory in many species, which have relevant functions in the establishment of tritrophic interactions. We thus conclude that -ocimene is a key plant volatile with multiple relevant functions in plants, depending on the organ and the time of emission. Experimental behavioural studies on pure -ocimene conducted with pollinating insects will be necessary to prove the assumptions made here. (VLID)2535286
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- 2021
35. Human Breathable Air in a Mediterranean Forest: Characterization of Monoterpene Concentrations under the Canopy
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Iolanda Filella, Roser Maneja, Joan Llusià, Ana Maria Yáñez-Serrano, Josep Peñuelas, and Albert Bach
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Mediterranean climate ,Canopy ,Daytime ,010504 meteorology & atmospheric sciences ,Health, Toxicology and Mutagenesis ,Monoterpene ,forest chemistry ,lcsh:Medicine ,Forest bathing ,Forests ,010501 environmental sciences ,Atmospheric sciences ,Orest bathing ,01 natural sciences ,Article ,Trees ,Human health ,Fddd ,Humans ,Oak forest ,BVOCs ,Diel vertical migration ,0105 earth and related environmental sciences ,Morning ,lcsh:R ,Public Health, Environmental and Occupational Health ,monoterpenes ,15. Life on land ,Forest exposure ,forest bathing ,humanities ,PTR-MS ,Europe ,13. Climate action ,Monoterpenes ,Environmental science ,Forest chemistry ,Seasons ,forest exposure ,Environmental Monitoring - Abstract
Monoterpenes have been identified as potential determinants of the human health effects induced by forest exposure. The present study characterizes the total monoterpene concentrations at nose height in a Mediterranean Holm oak forest located in North-East Iberian Peninsula during the annual emission peak (summer and autumn: June to November) using a Proton Transfer Reaction&ndash, Mass Spectrometry (PTR-MS). Results show a strong variability of the total monoterpene concentrations in season and daytime. The concentration peak appears during July and August. These two months displayed two average maxima in their diel cycles: One during early morning (from 6:00 to 8:00, 0.30 ppbv for July and 0.41 ppbv for August) and another one at early afternoon (from 13:00 to 15:00, 0.27 ppbv during July and 0.32 ppbv during August). Monoterpene concentrations were strongly related with the temperature (exponentially) and solar radiation (rectangular hyperbolic relationship). The concentrations registered here are similar or higher than in previous ex situ studies showcasing the effects of forests on human health. These findings provide relevant data for the scientific and healthcare community by improving the understanding of monoterpene dynamics at nose height and suggesting further research on the effects of forests on human health, particularly in the Mediterranean region.
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- 2020
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36. Probing the relationship between formaldehyde column concentrations and soil moisture using mixed models and attribution analysis
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Marcos Fernández Martinez, Andrea Pozzer, Trissevgeni Stavrakou, Ana Maria Yáñez-Serrano, Susanna Strada, Josep Peñuelas, Iolanda Filella, Maite Bauwens, and Filippo Giorgi
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Mixed model ,chemistry.chemical_compound ,chemistry ,Environmental chemistry ,Formaldehyde ,Environmental science ,Attribution analysis ,Water content ,Column (database) - Abstract
In response to changes in environmental factors (e.g., temperature, radiation, soil moisture), plants emit biogenic volatile organic compounds (BVOCs). Once released in the atmosphere, BVOCs influence levels of greenhouse gases and air pollutants (e.g., methane, ozone and aerosols), thus affecting both climate and air quality. In turn, climate change may alter BVOC emissions by modifying the driving environmental conditions and by increasing the occurrence and intensity of severe stresses that alter plant functioning. To understand and better constrain the evolution of BVOC emissions under future climates, it is important to reduce the uncertainties in global and regional estimates of BVOC emissions under present climate. Part of the uncertainty in the estimates of BVOC emissions is related to the impact that water stress might have on BVOC emissions. Field campaign, in-situ and laboratory experiments investigated the effect of different regimes of water stress (short- vs. long-term) on BVOC emissions. However, these studies provide geographically scattered and uneven results. To explore the relationship between BVOC emissions and water stress globally, we use remotely sensed soil moisture and formaldehyde, a proxy of BVOC emissions. As BVOCs include a multitude of gas tracers with lifetime ranging from few hours to days, a fully characterisation of these components is virtually impossible. Nevertheless, in the continental boundary layer, formaldehyde is an intermediate by-product of the oxidation of BVOCs, it thus provides a proxy for probing local BVOC emissions, and in particular isoprene, which accounts for about 50% of the total BVOC emissions.In the present study, retrievals of formaldehyde from the Ozone Monitoring Instrument (OMI) are combined with observations of soil moisture, biomass, aerosols, evapotranspiration, drought index, temperature and precipitation. Firstly, we look into the linear annual trend of the selected fields. Secondly, assuming formaldehyde as the dependent variable, we apply a linear mixed model analysis that extends the application of a simple linear regression model by accounting for both fixed (i.e., explained by the independent variables) and random (i.e., due to dependence in the data) effects. The analysis of the linear trend of formaldehyde concentrations shows a positive trend over the Amazon and Central Africa and a negative trend over South Africa and Australia. Over the Amazon, formaldehyde is negatively correlated with the Standardised Precipitation-Evapotranspiration Index (SPEI), a drought index that accounts for both changes in temperature and precipitation, with positive and negative values identifying wet and dry events, respectively. The outcomes of this analysis might provide new insights in the relationship between BVOC emissions and water stress and might help in improving parameterizations that link soil moisture to BVOC emissions in numerical models.
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- 2020
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37. Annual and seasonal variations in soil volatile organic compound concentrations in a Mediterranean shrubland and holm oak forest
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Dolores Asensio, Zhaobin Mu, Iolanda Filella, Romà Ogaya, Zhigang Yi, Joan Llusià, and Josep Peñuelas
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chemistry.chemical_classification ,Mediterranean climate ,geography ,geography.geographical_feature_category ,Soil Science ,Photosynthesis ,complex mixtures ,Shrubland ,chemistry ,Environmental chemistry ,Soil water ,Environmental science ,Soil ecology ,Volatile organic compound ,Ecosystem ,Water content - Abstract
Soil biogenic volatile organic compounds (VOCs) play an important role in soil ecology and function and may affect atmospheric chemistry. While previous studies of soil VOCs have predominantly measured surface flux exchange rates, VOC concentrations within the surface soil layer are largely unknown, especially in Mediterranean ecosystems. In this study, we measured seasonal and annual concentrations of soil VOCs in a Mediterranean shrubland and a holm oak forest over the period 2014–2016. Soil CO2 efflux, and soil enzyme and plant activities were measured as explanatory variables of soil VOC concentrations. There were greater total soil VOC concentrations in the shrubland (3.66 ± 1.01 ppb) than the holm oak forest (2.23 ± 0.51 ppb) across the study period. There were the greatest concentrations of monoterpenes (0.85 ± 0.43 ppb) and methanol (0.81 ± 0.20 ppb) in the shrubland and forest, respectively, and concentrations of methanol, acetic acid, formaldehyde, ethanol, and acetaldehyde were the dominant compounds in both ecosystems (>0.1 ppb). Although concentrations of some VOCs in both ecosystems were highest and lowest in spring and winter, respectively, the variability of other VOCs depended on compound and ecosystem. Soil temperature and water content, CO2 efflux, and enzyme activity were the best explanatory variables for variation in soil VOC concentrations in the two ecosystems: there was a stronger association between concentration of dominant compounds, except formaldehyde, with soil temperature and/or CO2 efflux than with soil water content. Activity of C- and N-degrading enzymes was positively associated with the concentration of VOCs, depending on ecosystem, and consistently correlated with high soil water content. In the holm oak forest soils, net photosynthetic rate (A) was positively correlated with soil concentration of monoterpenes. These results show that soil VOC concentrations in these Mediterranean ecosystems are driven by soil temperature and water content, and microbial activity, in combination with ecosystem plant activity. It is thus likely that projected climate change increases in temperature increase soil VOC concentrations and lead to increases in emissions to the atmosphere; however, microbial production and consumption of soil VOCs may be modulated by soil water content.
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- 2022
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38. Soil thawing regulates the spring growth onset in tundra and alpine biomes
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Adrià Descals, Josep Peñuelas, Marc Peaucelle, Philippe Ciais, Aleixandre Verger, Yongshuo H. Fu, Ivan A. Janssens, Iolanda Filella, S. L. Piao, Dennis D. Baldocchi, ICOS-ATC (ICOS-ATC), Laboratoire des Sciences du Climat et de l'Environnement [Gif-sur-Yvette] (LSCE), Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), H2020 Marie Skłodowska-Curie Actions, MSCA: 891369 European Research Council, ERC: ERC-SyG-2013-610028 IMBALANCE-P SGR 2017-1005 Fonds Wetenschappelijk Onderzoek, FWO: G018319N PID2019-110521GB-I00, The authors would like to acknowledge the financial support from the European Research Council Synergy grant ERC-SyG-2013-610028 IMBALANCE-P, the Spanish Government grant PID2019-110521GB-I00 and the Catalan Government grant SGR 2017-1005 . M.P. acknowledges the financial support from the Fonds Wetenschappelijk Onderzoek (FWO, grant no. G018319N ) and the H2020 Marie Skłodowska-Curie Actions (LEAF-2-TBM grant no. 891369 )., and Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)
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Environmental Engineering ,010504 meteorology & atmospheric sciences ,Climate Change ,Plant phenology ,Growing season ,010501 environmental sciences ,Forests ,Thawing ,01 natural sciences ,complex mixtures ,Soil ,Environmental Chemistry ,Biology ,Waste Management and Disposal ,Tundra ,Ecosystem ,0105 earth and related environmental sciences ,Phenology ,Taiga ,Temperature ,Deciduous forests ,Vegetation ,15. Life on land ,Pollution ,Chemistry ,Deciduous ,Agronomy ,Boreal forests ,13. Climate action ,Spring onset ,Soil water ,[SDE]Environmental Sciences ,Environmental science ,Seasons ,Temperate rainforest - Abstract
Soil temperature remains isothermal at 0 degrees C and water shifts to a liquid phase during soil thawing. Vegetation may receive this process as a signal and a key to restore physiological activity. We aimed to show the relationship between the timing of soil thawing and the spring growth onset. We estimated the delay between the soil thawing and the spring growth onset in 78 sites of the FLUXNET network. We built a soil thawing map derived from modeling for the northern hemisphere and related it to the greenness onset estimated with satellite imagery. Spring onset estimated with GPP time series occurred shortly after soil surface thawing in tundra (1.1 +/- 3.5 days) and alpine grasslands (16.6 +/- 5.8 days). The association was weaker for deciduous forests (40.3 +/- 4.2 days), especially where soils freeze infrequently. Needleleaved forests tended to start the growing season before the end of thawing (-17.4 +/- 3.6 days), although observations from remote sensing (MODIS Land Cover Dynamics) indicated that the onset of greenness started after the thawing period (26.8 +/- 32 days). This study highlights the role of soil temperature at the spring growth onset at high latitudes. Soil thawing becomes less relevant in temperate forests, where soil is occasionally frozen and other climate factors become more important. (C) 2020 Elsevier B.V. All rights reserved.
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- 2020
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39. The handbook for standardized field and laboratory measurements in terrestrial climate change experiments and observational studies (ClimEx)
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Lawren Sack, Simon M. Smart, Martine van der Ploeg, Petr Holub, Robert Weigel, Arezoo Taghizadeh-Toosi, Stuart W. Smith, Kamal Zurba, Ina C. Meier, Inger Kappel Schmidt, Lena Muffler, Fletcher W. Halliday, Benjamin Blonder, Karel Klem, Thomas Wohlgemuth, Arne Ven, Niki I. W. Leblans, Claus Beier, Peter A. Wilfahrt, Leandro Van Langenhove, Unni Vik, Casper T. Christiansen, Joan Llusià, Vigdis Vandvik, Marc Macias-Fauria, Katja Tielbörger, Iolanda Filella, Jan Jacob Keizer, Tone Birkemoe, Sabine Reinsch, Markus A. K. Sydenham, Mariska te Beest, Heidi Sjursen Konestabo, Inge H. J. Althuizen, Frederick C. Meinzer, Isabel C. Barrio, Megan L. Miller, Sara Vicca, Nelson Abrantes, Lee T. Dickman, Marc Estiarte, Richard J. Telford, Otmar Urban, Sean T. Michaletz, Catherine Preece, Stein Joar Hegland, Joachim Töpper, Ivika Ostonen, Paul Kardol, Albert Gargallo-Garriga, Sune Linder, Virve Ravolainen, Julie C. Zinnert, Michal Oravec, Miles R. Marshall, Gil Bohrer, Andreas Schindlbacher, Jarle W. Bjerke, Josep Peñuelas, Mark A. K. Gillespie, Pille Mänd, Lucas S. Cernusak, Daniel M. Johnson, Lucia Fuchslueger, Z. Carter Berry, Bjarni D. Sigurdsson, Ika Djukic, Jürgen Kreyling, Isabel Campos, Andrey V. Malyshev, Anke Jentsch, Ashley M. Matheny, James D. M. Speed, Hanna Lee, Jonas J. Lembrechts, Jan C. Ruppert, Christine Scoffoni, György Kröel-Dulay, Albert Porcar-Castell, Lauren K. Wood, Gesche Blume-Werry, Armando Lenz, Bogdan H. Chojnicki, Christopher M. Gough, Nate G. McDowell, Kristýna Večeřová, Günter Hoch, Iilka Beil, José M. Grünzweig, Iain Colin Prentice, Amy E. Eycott, Anja Linstädter, Erik Verbruggen, Inma Lebron, Dajana Radujković, Anne Sverdrup-Thygeson, David A. Robinson, Francesca Jaroszynska, Ellen Stuart-Haëntjens, Ragnhild Gya, Jordi Sardans, Hans J. De Boeck, Aud Helen Halbritter Rechsteiner, Bernhard J. Cosby, Gregory R. Goldsmith, Klaus Steenberg Larsen, John D. Marshall, María Almagro, Bernd Josef Berauer, Simon M. Landhäusser, Fiona M. Soper, Relena R. Ribbons, Karin Hansen, Scott B. Jones, Marco M. Lehmann, ClimMani Working Group, AXA Research Fund, Commission of the European Communities, Geology (-2014), Viikki Plant Science Centre (ViPS), Department of Forest Sciences, Ecosystem processes (INAR Forest Sciences), Forest Ecology and Management, and Institute for Atmospheric and Earth System Research (INAR)
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0106 biological sciences ,Open science ,coordinated experiments ,Computer science ,Matematikk og naturvitenskap: 400::Basale biofag: 470 [VDP] ,Data management ,DISTRIBUTED EXPERIMENTS ,Hydrology and Quantitative Water Management ,01 natural sciences ,Mathematics and natural scienses: 400::Basic biosciences: 470 [VDP] ,CARBON ,Basic biosciences: 470 [VDP] ,open science ,PRECIPITATION MANIPULATION EXPERIMENTS ,0502 Environmental Science and Management ,Scientific disciplines ,Ecology ,Ecological Modeling ,methodology ,Basale biofag: 470 [VDP] ,Data availability ,VDP::Basic biosciences: 470 ,experimental macroecology ,data management and documentation ,Chemistry ,Life Sciences & Biomedicine ,Hydrologie en Kwantitatief Waterbeheer ,119 Other natural sciences ,Best practice ,best practice ,Climate change ,Environmental Sciences & Ecology ,010603 evolutionary biology ,Ecosystem structure ,LITTER DECOMPOSITION ,Meteorology and Climatology ,0603 Evolutionary Biology ,vegetation ,PLANT ,Environmental planning ,Biology ,Ecology, Evolution, Behavior and Systematics ,METAANALYSIS ,ecosystem ,WIMEK ,Science & Technology ,0602 Ecology ,business.industry ,010604 marine biology & hydrobiology ,15. Life on land ,NITROGEN ,MODEL ,VDP::Basale biofag: 470 ,13. Climate action ,Observational study ,business ,RESPONSES - Abstract
1. Climate change is a world-wide threat to biodiversity and ecosystem structure, functioning and services. To understand the underlying drivers and mechanisms, and to predict the consequences for nature and people, we urgently need better understanding of the direction and magnitude of climate change impacts across the soil–plant–atmosphere continuum. An increasing number of climate change studies are creating new opportunities for meaningful and high-quality generalizations and improved process understanding. However, significant challenges exist related to data availability and/or compatibility across studies, compromising opportunities for data re-use, synthesis and upscaling. Many of these challenges relate to a lack of an established ‘best practice’ for measuring key impacts and responses. This restrains our current understanding of complex processes and mechanisms in terrestrial ecosystems related to climate change. 2. To overcome these challenges, we collected best-practice methods emerging from major ecological research networks and experiments, as synthesized by 115 experts from across a wide range of scientific disciplines. Our handbook contains guidance on the selection of response variables for different purposes, protocols for standardized measurements of 66 such response variables and advice on data management. Specifically, we recommend a minimum subset of variables that should be collected in all climate change studies to allow data re-use and synthesis, and give guidance on additional variables critical for different types of synthesis and upscaling. The goal of this community effort is to facilitate awareness of the importance and broader application of standardized methods to promote data re-use, availability, compatibility and transparency. We envision improved research practices that will increase returns on investments in individual research projects, facilitate second-order research outputs and create opportunities for collaboration across scientific communities. Ultimately, this should significantly improve the quality and impact of the science, which is required to fulfil society's best practice, coordinated experiments, data management and documentation, ecosystem, experimental macroecology, methodology, open science, vegetation This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. © 2019 The Authors. Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society.
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- 2019
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40. Characterisation of functional-trait dynamics at high spatial resolution in a Mediterranean forest from sentinel-2 and ground-truth data
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Iolanda Filella, Josep Peñuelas, Santiago Schauman, and Aleixandre Verger
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0106 biological sciences ,Mediterranean climate ,Canopy ,functional-trait dynamics ,010504 meteorology & atmospheric sciences ,Science ,Otras Ciencias de la Tierra y relacionadas con el Medio Ambiente ,Land cover ,Atmospheric sciences ,010603 evolutionary biology ,01 natural sciences ,VALIDATION ,Ciencias de la Tierra y relacionadas con el Medio Ambiente ,purl.org/becyt/ford/1 [https] ,purl.org/becyt/ford/1.5 [https] ,medicine ,field campaign ,0105 earth and related environmental sciences ,validation ,Ground truth ,FIELD CAMPAIGN ,spatial heterogeneity ,Vegetation ,15. Life on land ,Seasonality ,medicine.disease ,Spatial heterogeneity ,SPATIAL HETEROGENEITY ,SENTINEL-2 ,Photosynthetically active radiation ,General Earth and Planetary Sciences ,Environmental science ,Sentinel-2 ,MEDITERRANEAN FOREST ,FUNCTIONAL-TRAIT DYNAMICS ,CIENCIAS NATURALES Y EXACTAS ,mediterranean forest - Abstract
The characterisation of functional-trait dynamics of vegetation from remotely sensed data complements the structural characterisation of ecosystems. In this study we characterised for the first time the spatial heterogeneity of the intra-annual dynamics of the fraction of absorbed photosynthetically active radiation (FAPAR) as a functional trait of the vegetation in Prades Mediterranean forest in Catalonia, Spain. FAPAR was derived from the Multispectral Instrument (MSI) on the Sentinel-2 satellite and validated by comparison with the ground measurements acquired in June 2017 at the annual peak of vegetation activity. The validation results showed that most of points were distributed along the 1:1 line, with no bias nor scattering: R2 = 0.93, p <, 0.05, with a root mean square error of 0.03 FAPAR (4.3%). We classified the study area into nine vegetation groups with different dynamics of FAPAR using a methodology that is objective and repeatable over time. This functional classification based on the annual magnitude (FAPAR-M) and the seasonality (FAPAR-CV) from the data on one year (2016&ndash, 2017) complements structural classifications. The internal heterogeneity of the FAPAR dynamics in each land-cover type is attributed to the environmental and to the specific species composition variability. A spatial autoregressive (SAR) model for the main type of land cover, evergreen holm oak forest (Quercus ilex), indicated that topographic aspect, slope, height, and the topographic aspect x slope interaction accounted for most of the spatial heterogeneity of the functional trait FAPAR-M, thus improving our understanding of the explanatory factors of the annual absorption of photosynthetically active radiation by the vegetation canopy for this ecosystem.
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- 2018
41. A MODIS Photochemical Reflectance Index (PRI) as an Estimator of Isoprene Emissions in a Temperate Deciduous Forest
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Mark J. Potosnak, Thomas Karl, John A. Gamon, Marcos Fernández-Martínez, Josep Peñuelas, Alex Guenther, Roger Seco, Iolanda Filella, Lianhong Gu, Saewung Kim, Chao Zhang, Manuela Balzarolo, and Stephen G. Pallardy
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0106 biological sciences ,photorespiration ,010504 meteorology & atmospheric sciences ,Isoprene ,Economics ,Monoterpene ,Science ,Eddy covariance ,Growing season ,drought ,Atmospheric sciences ,Photochemical Reflectance Index ,Temperate deciduous forest ,01 natural sciences ,chemistry.chemical_compound ,substrate availability ,LUE ,reducing power ,0105 earth and related environmental sciences ,Drought ,Photorespiration ,Estimator ,15. Life on land ,Terpenoid ,chemistry ,MODIS ,13. Climate action ,General Earth and Planetary Sciences ,Environmental science ,MEGAN ,Substrate availability ,GPP ,PRI ,Reducing power ,isoprene ,010606 plant biology & botany - Abstract
The quantification of isoprene and monoterpene emissions at the ecosystem level with available models and field measurements is not entirely satisfactory. Remote-sensing techniques can extend the spatial and temporal assessment of isoprenoid fluxes. Detecting the exchange of biogenic volatile organic compounds (BVOCs) using these techniques is, however, a very challenging goal. Recent evidence suggests that a simple remotely sensed index, the photochemical reflectance index (PRI), which is indicative of light-use efficiency, relative pigment levels and excess reducing power, is a good indirect estimator of foliar isoprenoid emissions. We tested the ability of PRI to assess isoprenoid fluxes in a temperate deciduous forest in central USA throughout the entire growing season and under moderate and extreme drought conditions. We compared PRI time series calculated with MODIS bands to isoprene emissions measured with eddy covariance. MODIS PRI was correlated with isoprene emissions for most of the season, until emissions peaked. MODIS PRI was also able to detect the timing of the annual peak of emissions, even when it was advanced in response to drought conditions. PRI is thus a promising index to estimate isoprene emissions when it is complemented by information on potential emission. It may also be used to further improve models of isoprene emission under drought and other stress conditions. Direct estimation of isoprene emission by PRI is, however, limited, because PRI estimates LUE, and the relationship between LUE and isoprene emissions can be modified by severe stress conditions.
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- 2018
42. Enhanced emissions of floral volatiles by Diplotaxis erucoides (L.) in response to folivory and florivory by Pieris brassicae (L.)
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Iolanda Filella, Gerard Farré-Armengol, Josep Peñuelas, Clara Primante, and Joan Llusià
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0106 biological sciences ,Pieris brassicae ,Herbivore ,biology ,Chemistry ,Methanol ,Glucosinolates ,Ethyl acetate ,VOCs ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Biochemistry ,Pollinator ,Floral scent ,Botany ,Folivory-florivory synergy ,Diplotaxis erucoides ,Ecology, Evolution, Behavior and Systematics ,010606 plant biology & botany - Abstract
The main function of floral emissions of volatile organic compounds (VOCs) in entomophilous plants is to attract pollinators. Floral blends, however, can also contain volatile compounds with defensive functions. These defensive volatiles are specifically emitted when plants are attacked by pathogens or herbivores. We characterized the changes in the floral emissions of Diplotaxis erucoides induced by folivory and florivory by Pieris brassicae. Plants were continually subjected to folivory, florivory and folivory + florivory treatments for two days. We measured floral emissions with proton transfer reaction/mass spectroscopy (PTR-MS) at different times during the application of the treatments. The emissions of methanol, ethyl acetate and another compound, likely 3-butenenitrile, increased significantly in response to florivory. Methanol and 3-butenenitrile increased 2.4- and 26-fold, respectively, in response to the florivory treatment. Methanol, 3-butenenitrile and ethyl acetate increased 3-, 100- and 9-fold, respectively, in response to the folivory + florivory treatment. Folivory alone had no detectable effect on floral emissions. All VOC emissions began immediately after attack, with no evidence of delayed induction in any of the treatments. Folivory and florivory had a synergistic effect when applied together, which strengthened the defensive response when the attack was extended to the entire plant.
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- 2015
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43. Nutrient-rich plants emit a less intense blend of volatile isoprenoids
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Ian J. Wright, Francesco Loreto, Joan Llusià, Marcos Fernández-Martínez, Almut Arneth, Josep Peñuelas, Ülo Niinemets, and Iolanda Filella
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0106 biological sciences ,Physiology ,Monoterpene ,chemistry.chemical_element ,Plant Science ,Volatile organic compounds (VOCs) ,010603 evolutionary biology ,01 natural sciences ,Article ,chemistry.chemical_compound ,Nutrient ,Dry weight ,Botany ,Temperate climate ,Biology ,Isoprene ,Phylogeny ,Phosphorus (P) ,Abiotic component ,Phosphorus ,15. Life on land ,Terpenoid ,chemistry ,13. Climate action ,Monoterpenes ,Nutrient availability ,Nitrogen (N) ,010606 plant biology & botany - Abstract
Imbalance-p paper contact with Marcos Fernández: m.fernandez@creaf.uab.cat The emission of isoprenoids (e.g. isoprene and monoterpenes) by plants plays an important defensive role against biotic and abiotic stresses. Little is known, however, about the functional traits linked to species-specific variability in the types and rates of isoprenoids emitted and about possible co-evolution of functional traits with isoprenoid emission type (isoprene emitter, monoterpene emitter or both). - We combined data for isoprene and monoterpene emission rates per unit dry mass with key functional traits (foliar nitrogen (N) and phosphorus (P) concentrations, and leaf mass per area) and climate for 113 plant species, covering the boreal, wet temperate, Mediterranean and tropical biomes. - Foliar N was positively correlated with isoprene emission, and foliar P was negatively correlated with both isoprene and monoterpene emission rate. Nonemitting plants generally had the highest nutrient concentrations, and those storing monoterpenes had the lowest concentrations. Our phylogenetic analyses found that the type of isoprenoid emission followed an adaptive, rather than a random model of evolution. - Evolution of isoprenoids may be linked to nutrient availability. Foliar N and P are good predictors of the type of isoprenoid emission and the rate at which monoterpenes, and to a lesser extent isoprene, are emitted.
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- 2018
44. Assessment of the Response of Photosynthetic Activity of Mediterranean Evergreen Oaks to Enhanced Drought Stress and Recovery by Using PRI and R690/R630
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Gerard Farré-Armengol, Josep Peñuelas, Chao Zhang, Iolanda Filella, and Catherine Preece
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0106 biological sciences ,Mediterranean climate ,Drought stress ,010504 meteorology & atmospheric sciences ,Greenhouse ,drought ,Mediterranean ,Photochemical Reflectance Index ,Photosynthesis ,chlorophyll fluorescence (ChlF) ,photochemical reflectance index (PRI) ,photosynthesis ,R690/R630 ,recovery ,Photosynthesis R690/R630 ,01 natural sciences ,Recovery ,Botany ,Biology ,0105 earth and related environmental sciences ,Chlorophyll fluorescence (ChlF) ,Drought ,fungi ,food and beverages ,Forestry ,lcsh:QK900-989 ,15. Life on land ,Evergreen ,Reflectivity ,Highly sensitive ,Agronomy ,13. Climate action ,Photochemical reflectance index (PRI) ,lcsh:Plant ecology ,Environmental science ,010606 plant biology & botany - Abstract
Agraïments: Chao Zhang gratefully acknowledges the support from the Chinese Scholarship Council. The photochemical reflectance index (PRI) and red-edge region of the spectrum are known to be sensitive to plant physiological processes, and through measurement of these optical signals it is possible to use non-invasive remote sensing to monitor the plant photosynthetic status in response to environmental stresses such as drought. We conducted a greenhouse experiment using Quercus ilex, a Mediterranean evergreen oak species, to investigate the links between leaf-level PRI and the red-edge based reflectance ratio (R690/R630) with CO2 assimilation rates (A), and photochemical efficiency (FV/FM and Yield) in response to a gradient of mild to extreme drought treatments (nine progressively enhanced drought levels) and corresponding recovery. PRI and R690/R630 both decreased under enhanced drought stress, and had significant correlations with A, FV/FM and Yield. The differential values between recovery and drought treatments of PRI (DPRIrecovery) and R690/R630 (DR690/R630recovery) increased with the enhanced drought levels, and significantly correlated with the increases of DArecovery, DFV/FMrecovery and DYieldrecovery. We concluded that both PRI and R690/R630 were not only sensitive to enhanced drought stresses, but also highly sensitive to photosynthetic recovery. Our study makes important progress for remotely monitoring the effect of drought and recovery on photosynthetic regulation using the simple physiological indices of PRI and R690/R630.
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- 2017
45. Relationships among floral VOC emissions, floral rewards and visits of pollinators in five plant species of a Mediterranean shrubland
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Iolanda Filella, Josep Peñuelas, Joan Llusià, and Gerard Farré-Armengol
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media_common.quotation_subject ,PLANT-POLLINATOR INTERACTION ,FLORAL SCENT ,Plant Science ,Biology ,medicine.disease_cause ,Competition (biology) ,Shrubland ,FLORAL PHENOLOGY ,BISCUTELLA LAEVIGATA ,Pollinator ,Abundance (ecology) ,Pollen ,medicine ,Nectar ,MUSCARI NEGLECTUM ,media_common ,geography ,geography.geographical_feature_category ,Ecology ,Phenology ,EUPHORBIA FLAVICOMA ,fungi ,food and beverages ,Attraction ,PHLOMIS LYCHNITIS ,ROSMARINUS OFFICINALIS ,BIOLOGICAL MARKET - Abstract
Background and aims – In plant-pollinator communities seasonal changes in the abundance of pollinators lead to seasonal changes in competition among flowering plants for their services. Here we address the following question: Do flowers of a given species produce more olfactory signals (emissions of volatile compounds) and rewards (nectar and pollen) during the phase(s) of the flowering period within which they have to maximally compete with the signals and rewards of other co-flowering species in the community, compared to the amount of signals and rewards produced during the period(s) with less floral competition? Methods – We analysed the floral emission rates of biogenic volatile organic compounds by gas chromatography and proton transfer reaction mass spectrometry, the visitation rates of pollinators, and the availability of nectar and pollen during the flowering periods of five species to test whether floral rewards and signals would decrease with an increase in pollinator visitation rates during late spring and early summer, i.e. coinciding with decreasing competitive pressure for the services of pollinators. Key results – The results indicate that phenological patterns in the production of rewards are only present at the species level in those species with long flowering periods or with matching periods of changes in pollinator populations. The capacity of emitting isoprenoids and oxidised volatile organic compounds, however, did not present significant patterns during the flowering period in any of the five species studied. Conclusions – The results support the hypothesis of a decreasing competitive pressure for the attraction of pollinators that may drive a decrease in floral investment in rewards but not an accompanying decrease of the capacity of emitting volatile olfactory signals in a species with long flowering period. However, the negative correlation between nectar production and visitation rates may be reinforced by the opposite responses of these variables to climatic conditions. This fact makes difficult to discern possible evolutionary forces tending to decrease rewards from plastic responses to changing environmental conditions in that part of the flowering period in which pollinator visitation rates are higher.
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- 2014
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46. Foliar elemental composition of European forest tree species associated with evolutionary traits and present environmental and competitive conditions
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Rocío Alonso, Matthias C. Rillig, Iolanda Filella, Jofre Carnicer, Jordi Sardans, Tanja G. M. Sanders, Stavros D. Veresoglou, Josep Peñuelas, Ivan A. Janssens, and Gerard Farré-Armengol
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Ecological niche ,Global and Planetary Change ,Biogeochemical cycle ,Ecology ,Phylogenetic tree ,media_common.quotation_subject ,Niche ,15. Life on land ,Biology ,Competition (biology) ,Deposition (aerosol physics) ,Ecological stoichiometry ,Botany ,Ecology, Evolution, Behavior and Systematics ,media_common ,Woody plant - Abstract
Aim Plant elemental composition and stoichiometry are crucial for plant structure and function. We studied to what extent elemental stoichiometry in plants might be strongly related to environmental drivers and competition from coexisting species. Location Europe. Methods We analysed foliar N, P, K, Ca and Mg concentrations and their ratios among 50 species of European forest trees sampled in 5284 plots across Europe and their relationships with phylogeny, forest type, current climate and N deposition. Results Phylogeny is strongly related to overall foliar elemental composition in European tree species. Species identity explained 56.7% of the overall foliar elemental composition and stoichiometry. Forest type and current climatic conditions also partially explained the differences in foliar elemental composition among species. In the same genus co-occurring species had overall higher differences in foliar elemental composition and stoichiometry than the non-co-occurring species. Main conclusions The different foliar elemental compositions among species are related to phylogenetic distances, but they are also related to current climatic conditions, forest types, drivers of global change such as atmospheric N deposition, and to differences among co-occurring species as a probable consequence of niche specialization to reduce direct competition for the same resources. Different species have their own ‘fixed’ foliar elemental compositions but retain some degree of plasticity to the current climatic and competitive conditions. A wider set of elements beyond N and P better represent the biogeochemical niche and are highly sensitive to plant function. Foliar elemental composition can thus be useful for representing important aspects of plant species niches.
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- 2014
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47. Remote sensing of atmospheric biogenic volatile organic compounds (BVOCs) via satellite-based formaldehyde vertical column assessments
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Shawn C. Kefauver, Josep Peñuelas, and Iolanda Filella
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chemistry.chemical_classification ,Formaldehyde ,Climate change ,Global change ,Vegetation ,Atmospheric sciences ,chemistry.chemical_compound ,chemistry ,Remote sensing (archaeology) ,Atmospheric chemistry ,General Earth and Planetary Sciences ,Environmental science ,Satellite ,Volatile organic compound ,Remote sensing - Abstract
Global vegetation is intrinsically linked to atmospheric chemistry and climate, and better understanding vegetation–atmosphere interactions can allow scientists to not only predict future change patterns, but also to suggest future policies and adaptations to mediate vegetation feedbacks with atmospheric chemistry and climate. Improving global and regional estimates of biogenic volatile organic compound (BVOCs) emissions is of great interest for their biological and environmental effects and possible positive and negative feedbacks related to climate change and other vectors of global change. Multiple studies indicate that BVOCs are on the rise, and with near 20 years of global remote sensing of formaldehyde (HCHO), the immediate and dominant BVOC atmospheric oxidation product, the accurate and quantitative linkage of BVOCs with plant ecology, atmospheric chemistry, and climate change is of increasing relevance. The remote sensing of BVOCs, via HCHO in a three step process, suffers from an additive modell...
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- 2014
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48. A tethered-balloon PTRMS sampling approach for surveying of landscape-scale biogenic VOC fluxes
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Iolanda Filella, Romà Ogaya, Joan Llusià, Roger Seco, Josep Peñuelas, Jim Greenberg, Jordi Sardans, Xiaoyan Jiang, Alex Guenther, A. Turnipseed, Marc Estiarte, and Francesca Rapparini
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chemistry.chemical_classification ,Atmospheric Science ,geography ,geography.geographical_feature_category ,Meteorology ,lcsh:TA715-787 ,Mixed layer ,lcsh:Earthwork. Foundations ,Sampling (statistics) ,Terrain ,Vegetation ,Inlet ,Atmospheric sciences ,lcsh:Environmental engineering ,Flux (metallurgy) ,chemistry ,Environmental science ,Volatile organic compound ,Surface layer ,lcsh:TA170-171 - Abstract
Landscape-scale fluxes of biogenic gases were surveyed by deploying a 100 m Teflon tube attached to a tethered balloon as a sampling inlet for a fast-response proton-transfer-reaction mass spectrometer (PTRMS). Along with meteorological instruments deployed on the tethered balloon and a 3 m tripod and outputs from a regional weather model, these observations were used to estimate landscape-scale biogenic volatile organic compound fluxes with two micrometeorological techniques: mixed layer variance and surface layer gradients. This highly mobile sampling system was deployed at four field sites near Barcelona to estimate landscape-scale biogenic volatile organic compound (BVOC) emission factors in a relatively short period (3 weeks). The two micrometeorological techniques were compared with emissions predicted with a biogenic emission model using site-specific emission factors and land-cover characteristics for all four sites. The methods agreed within the uncertainty of the techniques in most cases, even though the locations had considerable heterogeneity in species distribution and complex terrain. Considering the wide range in reported BVOC emission factors for individual vegetation species (more than an order of magnitude), this temporally short and inexpensive flux estimation technique may be useful for constraining BVOC emission factors used as model inputs.
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- 2014
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49. Photosynthetic light use efficiency from satellite sensors: From global to Mediterranean vegetation
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Martín F. Garbulsky, Iolanda Filella, Josep Peñuelas, and Aleixandre Verger
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Abiotic stresses ,INGENIERÍAS Y TECNOLOGÍAS ,Plant Science ,Photosynthesis ,Photochemical Reflectance Index ,Fluorescence ,Normalized Difference Vegetation Index ,Sensores Remotos ,Leaf pigments ,Ingeniería del Medio Ambiente ,Chlorophyll fluorescence ,Ecology, Evolution, Behavior and Systematics ,Remote sensing ,Ecology ,Agricultura ,Carbon uptake ,Hyperspectral imaging ,Primary production ,Mediterranean vegetation ,CIENCIAS AGRÍCOLAS ,Environmental science ,Satellite ,PRI ,Agricultura, Silvicultura y Pesca ,Agronomy and Crop Science - Abstract
Recent advances in remote-sensing techniques for light use efficiency (LUE) are providing new possibilities for monitoring carbon uptake by terrestrial vegetation (gross primary production, GPP), in particular for Mediterranean vegetation types. This article reviews the state of the art of two of the most promising approaches for remotely estimating LUE: the use of the photochemical reflectance index (PRI) and the exploitation of the passive chlorophyll fluorescence signal. The theoretical and technical issues that remain before these methods can be implemented for the operational global production of LUE from forthcoming hyperspectral satellite data are identified for future research. Fil: Garbulsky, Martín Fabio. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Fisiológicas y Ecológicas Vinculadas a la Agricultura; Argentina. Universidad de Buenos Aires. Facultad de Agronomía. Departamento de Produccion Animal. Cátedra de Forrajicultura; Argentina Fil: Filella, I.. Consejo Superior de Investigaciones Científicas. Global Ecology Unit; España. Centro de Investigación Ecológica y Aplicaciones Forestales; España Fil: Verger, A.. Consejo Superior de Investigaciones Científicas. Global Ecology Unit; España. Centro de Investigación Ecológica y Aplicaciones Forestales; España Fil: Peñuelas, J.. Consejo Superior de Investigaciones Científicas. Global Ecology Unit; España. Centro de Investigación Ecológica y Aplicaciones Forestales; España
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- 2014
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50. Changes in floral bouquets from compound-specific responses to increasing temperatures
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Josep Peñuelas, Joan Llusià, Iolanda Filella, Ülo Niinemets, and Gerard Farré-Armengol
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Mediterranean climate ,Pollination ,Physicochemical properties ,Climate Change ,Climate change ,Flowers ,Biology ,Chemical communication ,Models, Biological ,Gas Chromatography-Mass Spectrometry ,Article ,Terpene ,Common species ,Pollinator ,Botany ,Temperature-response curve ,Flower volatile emissions ,Environmental Chemistry ,Computer Simulation ,Flower physiology ,General Environmental Science ,Volatile Organic Compounds ,Global and Planetary Change ,Ecology ,Terpenes ,Global warming ,fungi ,Temperature ,food and beverages ,Emission profiles ,Horticulture ,13. Climate action ,Volatility ,Odorants ,Monoterpenes ,Sesquiterpenes - Abstract
We addressed the potential effects of changes in ambient temperature on the profiles of volatile emissions from flow- ers and tested whether warming could induce significant quantitative and qualitative changes in floral emissions, which would potentially interfere with plant-pollinator chemical communication. We measured the temperature responses of floral emissions of various common species of Mediterranean plants using dynamic headspace sampling and used GC-MS to identify and quantify the emitted terpenes. Floral emissions increased with temperature to an optimum and thereafter decreased. The responses to temperature modeled here predicted increases in the rates of flo- ral terpene emission of 0.03-1.4-fold, depending on the species, in response to an increase of 1 °C in the mean global ambient temperature. Under the warmest projections that predict a maximum increase of 5 °C in the mean tempera- ture of Mediterranean climates in the Northern Hemisphere by the end of the century, our models predicted increases in the rates of floral terpene emissions of 0.34-9.1-fold, depending on the species. The species with the lowest emis- sion rates had the highest relative increases in floral terpene emissions with temperature increases of 1-5 °C. The response of floral emissions to temperature differed among species and among different compounds within the spe- cies. Warming not only increased the rates of total emissions, but also changed the ratios among compounds that con- stituted the floral scents, i.e. increased the signal for pollinators, but also importantly altered the signal fidelity and probability of identification by pollinators, especially for specialists with a strong reliance on species-specific floral blends.
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- 2014
- Full Text
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