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Fluorescence microscopy is a powerful tool for visualizing cellular structures, but it faces challenges such as noise, low contrast, and autofluorescence that can hinder accurate image analysis. To address these limitations, we propose a novel hybrid image enhancement method that combines wavelet‐based denoising, linear contrast enhancement, and convolutional neural network‐based autofluorescence correction. Our automated method employs Haar wavelet transform for noise reduction and a series of adaptive linear transformations for pixel value adjustment, effectively enhancing image quality while preserving crucial details. Furthermore, we introduce a semantic segmentation approach using CNNs to identify and correct autofluorescence in cellular aggregates, enabling targeted mitigation of unwanted background signals. We validate our method using quantitative metrics, such as signal‐to‐noise ratio (SNR) and peak signal‐to‐noise ratio (PSNR), demonstrating superior performance compared to both mathematical and deep learning‐based techniques. Our method achieves an average SNR improvement of 8.5 dB and a PSNR increase of 4.2 dB compared with the original images, outperforming state‐of‐the‐art methods such as BM3D and CLAHE. Extensive testing on diverse datasets, including publicly available human‐derived cardiosphere and fluorescence microscopy images of bovine endothelial cells stained for mitochondria and actin filaments, showcases the flexibility and robustness of our approach across various acquisition conditions and artifacts. The proposed method significantly improves fluorescence microscopy image quality, facilitating more accurate and reliable analysis of cellular structures and processes, with potential applications in biomedical research and clinical diagnostics. [ABSTRACT FROM AUTHOR]

Low-light images often exhibit reduced brightness, weak contrast, and color distortion. Consequently, enhancing low-light images is essential to make them suitable for computer vision tasks. Nevertheless, addressing this task is particularly challenging because of the inherent constraints posed by low-light environments. In this study, we propose a novel low-light image enhancement network using adaptive feature stretching and informative attention. The proposed network architecture mainly includes an adaptive feature stretch block designed to extend the narrow range of image features to a broader range. To achieve improved image restoration, an informative attention block is introduced to assign weight to the output features from the adaptive feature stretch block. We conduct comprehensive experiments on widely used benchmark datasets to assess the effectiveness of the proposed network. The experimental results show that the proposed low-light image enhancement network yields satisfactory results compared with existing state-of-the-art methods from both subjective and objective perspectives while maintaining acceptable network complexity. [ABSTRACT FROM AUTHOR]

In the realm of offline handwritten text recognition, numerous normalization algorithms have been developed over the years to serve as preprocessing steps prior to applying automatic recognition models to handwritten text scanned images. These algorithms have demonstrated effectiveness in enhancing the overall performance of recognition architectures. However, many of these methods rely heavily on heuristic strategies that are not seamlessly integrated with the recognition architecture itself. This paper introduces the use of a Pix2Pix trainable model, a specific type of conditional generative adversarial network, as the method to normalize handwritten text images. Also, this algorithm can be seamlessly integrated as the initial stage of any deep learning architecture designed for handwritten recognition tasks. All of this facilitates training the normalization and recognition components as a unified whole, while still maintaining some interpretability of each module. Our proposed normalization approach learns from a blend of heuristic transformations applied to text images, aiming to mitigate the impact of intra-personal handwriting variability among different writers. As a result, it achieves slope and slant normalizations, alongside other conventional preprocessing objectives, such as normalizing the size of text ascenders and descenders. We will demonstrate that the proposed architecture replicates, and in certain cases surpasses, the results of a widely used heuristic algorithm across two metrics and when integrated as the first step of a deep recognition architecture. [ABSTRACT FROM AUTHOR]

The COVID-19 pandemic, which originated in 2019, has caused a significant global number of fatalities. The economic and healthcare impacts of COVID-19 infection in survivors have become evident during this period. An important first step towards the effective management of COVID-19 is an effective screening of patients, which includes radiology examinations using chest radiography as one of the primary screening modalities. Early research has shown that patients with pneumonia and COVID-19 infection show different anomalies in chest radiography images. Classifying images of COVID-19 and pneumonia diseases has proven to be a challenging task for computers. Several classification systems were developed using different databases in order to determine the category to which the detected image belongs. The accuracy percentage was assessed using these systems. However, there are instances where the imaging techniques may produce distorted images, low contrast images, or fail to accurately depict the edges of the internal organs. These challenges can have an impact on the accuracy of a classification model's design. In this study, a new robust model called FPD-VGG-16 is introduced. This model combines the Visual Geometry Group (VGG-16) deep learning technique with the Fractional Partial Differential (FrPDA) mathematical method. The idea of using FrPDA is to improve edges, increase the visibility of texture details, and retain smooth areas in comparison to using only deep algorithms. The proposed model demonstrates accurate pneumonia detection and COVID-19 classification from chest X-ray images; the model recorded an impressive accuracy of 98.1%, along with equally remarkable precision and recall values 0.982 and 0.980 respectively, as well as and f1-score score of 0.981. While 96.2% as an accuracy measure is achieved in this study without using the FrPDA algorithm. [ABSTRACT FROM AUTHOR]

In the field of traffic surveillance systems, where effective traffic management and safety are the primary concerns, vehicle detection and tracking play an important role. Low brightness, low contrast, and noise are issues with low-light environments that result from poor lighting or insufficient exposure. In this paper, we proposed a vehicle detection and tracking model based on the aerial image captured during nighttime. Before object detection, we performed fogging and image enhancement using MIRNet architecture. After pre-processing, YOLOv5 was used to locate each vehicle position in the image. Each detected vehicle was subjected to a Scale-Invariant Feature Transform (SIFT) feature extraction algorithm to assign a unique identifier to track multiple vehicles in the image frames. To get the best possible location of vehicles in the succeeding frames templates were extracted and template matching was performed. The proposed model achieves a precision score of 0.924 for detection and 0.861 for tracking with the Unmanned Aerial Vehicle Benchmark Object Detection and Tracking (UAVDT) dataset, 0.904 for detection, and 0.833 for tracking with the Vision Meets Drone Single Object-Tracking (VisDrone) dataset.

Objectives: To develop a radiomics model based on diffusion-weighted imaging (DWI) utilizing automated machine learning method to differentiate cerebral cystic metastases from brain abscesses. Materials and methods: A total of 186 patients with cerebral cystic metastases (n = 98) and brain abscesses (n = 88) from two clinical institutions were retrospectively included. The datasets (129 from institution A) were randomly portioned into separate 75% training and 25% internal testing sets. Radiomics features were extracted from DWI images using two subregions of the lesion (cystic core and solid wall). A thorough image preprocessing method was applied to DWI images to ensure the robustness of radiomics features before feature extraction. Then the Tree-based Pipeline Optimization Tool (TPOT) was utilized to search for the best optimized machine learning pipeline, using a fivefold cross-validation in the training set. The external test set (57 from institution B) was used to evaluate the model’s performance. Results: Seven distinct TPOT models were optimized to distinguish between cerebral cystic metastases and abscesses either based on different features combination or using wavelet transform. The optimal model demonstrated an AUC of 1.00, an accuracy of 0.97, sensitivity of 1.00, and specificity of 0.93 in the internal test set, based on the combination of cystic core and solid wall radiomics signature using wavelet transform. In the external test set, this model reached 1.00 AUC, 0.96 accuracy, 1.00 sensitivity, and 0.93 specificity. Conclusion: The DWI-based radiomics model established by TPOT exhibits a promising predictive capacity in distinguishing cerebral cystic metastases from abscesses. [ABSTRACT FROM AUTHOR]

In cultivated landscapes, grasslands are an important land use type for insect life. Grassland management practices can have a significant impact on insect ecology. For example, intense fertilization and frequent cutting can reduce the diversity and abundance of insects by destroying their habitat and food sources. Thus, the quality of grassland habitat for insect development depends on its management intensity. The intensification of grassland production is discussed as one factor contributing to the decline in insect biomass over recent decades. Characterizing grassland changes over time provides one piece to the larger puzzle of insect decline. We analyzed landscape-level trends in grassland biomass near Orbroich and Wahnbachtal in North Rhine-Westphalia, Germany, over a 25-year period. In both areas, pronounced insect biomass decline had been observed. More than 430 Landsat images were used. An image normalization process was developed and employed to ensure that observed changes over time were attributed to grassland changes and not systemic changes inherent within image time series. Distinct clusters of grassland parcels were identified based on intensity and temporal changes in biomass using Normalized Difference Vegetation Index (NDVI) as an indicator. Cluster separability was confirmed using the Transform Divergence method. The results showed clusters having periods of distinct trends in vegetation biomass, indicating changes in grassland agronomic and/or management practices over time (e.g., fertilization, increased silage production). Changes in management practices coincided with regional trends in cultivation as documented by official statistics. We demonstrated the feasibility of using 100+ images over multiple decades to perform a long-term remote sensing analysis examining grassland change. These temporally expansive and spatially detailed trends of grassland change can be included as factors in the multi-variate analysis of insect decline. The methodology can be applied to other geographic areas. Such improved insights can support informed landscape design and cultivation patterns in relation to insect ecology and the broader context of biodiversity enhancement. [ABSTRACT FROM AUTHOR]

Paddy has been the staple food of millions of people and due to its rising demand, it is imperative to increase paddy crop yield within the limited availability of land. Paddy yield depends on many factors and one of the significant factors is the quality of germinative seed. However, the traditional methods for selecting quality germinative seeds are expensive and time-consuming. Therefore, automatic detection of germinative seeds using non-destructive techniques is unavoidable. Few methods exist for the identification of germinative paddy seeds. However, these methods suffered from low-accuracy and precision rates because the methods only depends on hand-crafted and classical features. In this research, we propose a novel framework to identify germinative seeds applying deep convolutional neural network (CNN). We collected paddy seeds' images using a smartphone in open environment. However, acquiring images in open environment can lead to illumination, orientation, and scale-related challenges, which might hinder model performance. Therefore, we addressed the illumination problem by converting the images into HSV format and applying the image normalization technique to handle scale and orientation challenges. We also address the overfitting problem by deriving an optimal set of parameters by tuning the hyperparameters of the model. The experimental results on a dataset consisting of three paddy varieties: BRRI 36, BRRI 49, and BRRI 52 demonstrated that our proposed framework achieved high accuracy (99.50%) in identifying germinative paddy seeds. We also compare the performance of our model applying different pre-trained transfer learning techniques (googlenet, alexnet, resnet50, and resnet101) and an existing traditional feature-based technique, RSGES. Our proposed model significantly outperforms the transfer learning techniques and RSGES for all the datasets in terms of all evaluation metrics. Hence, this model can be integrated in the industry and farmer level as a non-destructive method for identifying germinative paddy seeds. [ABSTRACT FROM AUTHOR]

In the realm of offline handwritten text recognition, numerous normalization algorithms have been developed over the years to serve as preprocessing steps prior to applying automatic recognition models to handwritten text scanned images. These algorithms have demonstrated effectiveness in enhancing the overall performance of recognition architectures. However, many of these methods rely heavily on heuristic strategies that are not seamlessly integrated with the recognition architecture itself. This paper introduces the use of a Pix2Pix trainable model, a specific type of conditional generative adversarial network, as the method to normalize handwritten text images. Also, this algorithm can be seamlessly integrated as the initial stage of any deep learning architecture designed for handwritten recognition tasks. All of this facilitates training the normalization and recognition components as a unified whole, while still maintaining some interpretability of each module. Our proposed normalization approach learns from a blend of heuristic transformations applied to text images, aiming to mitigate the impact of intra-personal handwriting variability among different writers. As a result, it achieves slope and slant normalizations, alongside other conventional preprocessing objectives, such as normalizing the size of text ascenders and descenders. We will demonstrate that the proposed architecture replicates, and in certain cases surpasses, the results of a widely used heuristic algorithm across two metrics and when integrated as the first step of a deep recognition architecture.

It is a challenging work to solve the geometric attack in the field of digital watermarking. In order to solve the synchronization between the host image and the watermark, image normalization is introduced. Firstly, the geometrically invariant space of image is constructed by using image normalization, and a region of interest (ROI) is obtained from the normalized image by utilizing the invariant centroid theory. Then, the contourlet transform is performed on the ROI. Low-pass sub-band coefficients are divided into non-overlapping blocks. Finally, as the energy of the blocks are not the same, an adaptive quantization step is used to embed the binary watermark information on the maximum singular value of the block. The experimental results demonstrate that the watermarked images exhibit high visual quality, and the scheme is effective against common image processing and geometric distortions.

Multitemporal cross-sensor imagery is fundamental for the monitoring of the Earth's surface over time. However, these data often lack visual consistency because of variations in the atmospheric and surface conditions, making it challenging to compare and analyze images. Various image-normalization methods have been proposed to address this issue, such as histogram matching and linear regression using iteratively reweighted multivariate alteration detection (IR-MAD). However, these methods have limitations in their ability to maintain important features and their requirement of reference images, which may not be available or may not adequately represent the target images. To overcome these limitations, a relaxation-based algorithm for satellite-image normalization is proposed. The algorithm iteratively adjusts the radiometric values of images by updating the normalization parameters (slope (α) and intercept (β)) until a desired level of consistency is reached. This method was tested on multitemporal cross-sensor-image datasets and showed significant improvements in radiometric consistency compared to other methods. The proposed relaxation algorithm outperformed IR-MAD and the original images in reducing radiometric inconsistencies, maintaining important features, and improving the accuracy (MAE = 2.3; RMSE = 2.8) and consistency of the surface-reflectance values (R2 = 87.56%; Euclidean distance = 2.11; spectral angle mapper = 12.60). [ABSTRACT FROM AUTHOR]

• Simplify invariant algorithms using orthogonal properties of basis functions. • Fast computation of moment invariants using a new set of recurrence relations. • New normalization scheme for anisotropic scaling and translation invariants. • Features with better discriminative power and resilience to noise. [Display omitted] Anisotropic scaling and translation invariants of Tchebichef moments are commonly used in image analysis to address issues arising from patterns distorted by non-uniform scaling and translation. In this paper, we formulate a new fast computational algorithm and a new normalization scheme based on the properties of Tchebichef moments. The proposed model can correctly resolve the mirror reflection ambiguities caused by the scaling transformations and gives smaller size deviations for various patterns so that the canonical form can easily fit within the normalized space. An empirical study shows that the proposed method significantly improves numerical computation and classification accuracy under non-noisy and noisy conditions when compared with existing methods. The main contribution of this paper is a novel fast computational algorithm for anisotropic scaling and translation invariants of Tchebichef moments and a new normalization scheme that produces features with higher discriminative power. The proposed algorithm is useful for recognizing objects with non-uniform size and displacement deformations. It is also a key component in formulating a better affine invariant algorithm for the image analysis community. [ABSTRACT FROM AUTHOR]

This paper analyzes the problems of document image recognition and the existing solutions. Document recognition algorithms have been studied for quite a long time, but despite this, currently, the topic is relevant and research continues, as evidenced by a large number of associated publications and reviews. However, most of these works and reviews are devoted to individual recognition tasks. In this review, the entire set of methods, approaches, and algorithms necessary for document recognition is considered. A preliminary systematization allowed us to distinguish groups of methods for extracting information from documents of different types: single-page and multi-page, with text and handwritten contents, with a fixed template and flexible structure, and digitalized via different ways: scanning, photographing, video recording. Here, we consider methods of document recognition and analysis applied to a wide range of tasks: identification and verification of identity, due diligence, machine learning algorithms, questionnaires, and audits. The groups of methods necessary for the recognition of a single page image are examined: the classical computer vision algorithms, i.e., keypoints, local feature descriptors, Fast Hough Transforms, image binarization, and modern neural network models for document boundary detection, document classification, document structure analysis, i.e., text blocks and tables localization, extraction and recognition of the details, post-processing of recognition results. The review provides a description of publicly available experimental data packages for training and testing recognition algorithms. Methods for optimizing the performance of document image analysis and recognition methods are described.

Primary Central Nervous System Lymphoma (PCNSL) is an aggressive neoplasm with a poor prognosis. Although therapeutic progresses have significantly improved Overall Survival (OS), a number of patients do not respond to HD–MTX-based chemotherapy (15–25%) or experience relapse (25–50%) after an initial response. The reasons underlying this poor response to therapy are unknown. Thus, there is an urgent need to develop improved predictive models for PCNSL. In this study, we investigated whether radiomics features can improve outcome prediction in patients with PCNSL. A total of 80 patients diagnosed with PCNSL were enrolled. A patient sub-group, with complete Magnetic Resonance Imaging (MRI) series, were selected for the stratification analysis. Following radiomics feature extraction and selection, different Machine Learning (ML) models were tested for OS and Progression-free Survival (PFS) prediction. To assess the stability of the selected features, images from 23 patients scanned at three different time points were used to compute the Interclass Correlation Coefficient (ICC) and to evaluate the reproducibility of each feature for both original and normalized images. Features extracted from Z-score normalized images were significantly more stable than those extracted from non-normalized images with an improvement of about 38% on average (p-value < 10 − 12 ). The area under the ROC curve (AUC) showed that radiomics-based prediction overcame prediction based on current clinical prognostic factors with an improvement of 23% for OS and 50% for PFS, respectively. These results indicate that radiomics features extracted from normalized MR images can improve prognosis stratification of PCNSL patients and pave the way for further study on its potential role to drive treatment choice. [ABSTRACT FROM AUTHOR]

A method has been developed for calculating the proton beam transmission of static objects with a quasi-uniform areal density from a single proton radiography image under the condition of a Gaussian-like transverse beam profile. The calculated images of the transmission are intended to reconstruct the density of the investigated objects. A proton radiography of static targets was performed on an experimental setup with special magnetic optics PUMA with a proton energy of 800 MeV and an intensity of 1010 particles per image. It is shown that the application of the method makes it possible to reconstruct the proton beam transmission of the object under study with an average relative error of approximately 1–1.2%. [ABSTRACT FROM AUTHOR]

Background and purpose: Radiomics offers great potential in improving diagnosis and treatment for patients with glioblastoma multiforme. However, in order to implement radiomics in clinical routine, the features used for prognostic modelling need to be stable. This comprises significant challenge in multi-center studies. The aim of this study was to evaluate the impact of different image normalization methods on MRI features robustness in multi-center study. Methods: Radiomics stability was checked on magnetic resonance images of eleven patients. The images were acquired in two different hospitals using contrast-enhanced T1 sequences. The images were normalized using one of five investigated approaches including grey-level discretization, histogram matching and z-score. Then, radiomic features were extracted and features stability was evaluated using intra-class correlation coefficients. In the second part of the study, improvement in the prognostic performance of features was tested on 60 patients derived from publicly available dataset. Results: Depending on the normalization scheme, the percentage of stable features varied from 3.4% to 8%. The histogram matching based on the tumor region showed the highest amount of the stable features (113/1404); while normalization using fixed bin size resulted in 48 stable features. The histogram matching also led to better prognostic value (median c-index increase of 0.065) comparing to non-normalized images. Conclusions: MRI normalization plays an important role in radiomics. Appropriate normalization helps to select robust features, which can be used for prognostic modelling in multicenter studies. In our study, histogram matching based on tumor region improved both stability of radiomic features and their prognostic value.

In cultivated landscapes, grasslands are an important land use type for insect life. Grassland management practices can have a significant impact on insect ecology. For example, intense fertilization and frequent cutting can reduce the diversity and abundance of insects by destroying their habitat and food sources. Thus, the quality of grassland habitat for insect development depends on its management intensity. The intensification of grassland production is discussed as one factor contributing to the decline in insect biomass over recent decades. Characterizing grassland changes over time provides one piece to the larger puzzle of insect decline. We analyzed landscape-level trends in grassland biomass near Orbroich and Wahnbachtal in North Rhine-Westphalia, Germany, over a 25-year period. In both areas, pronounced insect biomass decline had been observed. More than 430 Landsat images were used. An image normalization process was developed and employed to ensure that observed changes over time were attributed to grassland changes and not systemic changes inherent within image time series. Distinct clusters of grassland parcels were identified based on intensity and temporal changes in biomass using Normalized Difference Vegetation Index (NDVI) as an indicator. Cluster separability was confirmed using the Transform Divergence method. The results showed clusters having periods of distinct trends in vegetation biomass, indicating changes in grassland agronomic and/or management practices over time (e.g., fertilization, increased silage production). Changes in management practices coincided with regional trends in cultivation as documented by official statistics. We demonstrated the feasibility of using 100+ images over multiple decades to perform a long-term remote sensing analysis examining grassland change. These temporally expansive and spatially detailed trends of grassland change can be included as factors in the multi-variate analysis of insect decline. The methodology can be applied to other geographic areas. Such improved insights can support informed landscape design and cultivation patterns in relation to insect ecology and the broader context of biodiversity enhancement.

Multitemporal cross-sensor imagery is fundamental for the monitoring of the Earth’s surface over time. However, these data often lack visual consistency because of variations in the atmospheric and surface conditions, making it challenging to compare and analyze images. Various image-normalization methods have been proposed to address this issue, such as histogram matching and linear regression using iteratively reweighted multivariate alteration detection (IR-MAD). However, these methods have limitations in their ability to maintain important features and their requirement of reference images, which may not be available or may not adequately represent the target images. To overcome these limitations, a relaxation-based algorithm for satellite-image normalization is proposed. The algorithm iteratively adjusts the radiometric values of images by updating the normalization parameters (slope (α) and intercept (β)) until a desired level of consistency is reached. This method was tested on multitemporal cross-sensor-image datasets and showed significant improvements in radiometric consistency compared to other methods. The proposed relaxation algorithm outperformed IR-MAD and the original images in reducing radiometric inconsistencies, maintaining important features, and improving the accuracy (MAE = 2.3; RMSE = 2.8) and consistency of the surface-reflectance values (R2 = 87.56%; Euclidean distance = 2.11; spectral angle mapper = 12.60).

Optical character recognition (OCR) in images captured from arbitrary angles requires preliminary normalization, i.e. a geometric transformation resulting in an image as if it was captured at an angle suitable for OCR. In most cases, a surface containing characters can be considered flat, and a pinhole model can be adopted for a camera. Thus, in theory, the normalization should be projective. Usually, the camera optical axis is approximately perpendicular to the document surface, so the projective normalization can be replaced with an affine one without a significant loss of accuracy. An affine image transformation is performed significantly faster than a projective normalization, which is important for OCR on mobile devices. In this work, we propose a fast approach for image normalization. It utilizes an affine normalization instead of a projective one if there is no significant loss of accuracy. The approach is based on a proposed criterion for the normalization accuracy: root mean square (RMS) coordinate discrepancies over the region of interest (ROI). The problem of optimal affine normalization according to this criterion is considered. We have established that this unconstrained optimization is quadratic and can be reduced to a problem of fractional quadratic functions integration over the ROI. The latter was solved analytically in the case of OCR where the ROI consists of rectangles. The proposed approach is generalized for various cases when instead of the affine transform its special cases are used: scaling, translation, shearing, and their superposition, allowing the image normalization procedure to be further accelerated.

Translation rotation and scale invariants of Tchebichef moments are commonly used descriptors in image analysis. Existing invariant algorithms either indirectly compute from geometric moments or directly using Tchebichef moments. The former approach is relatively simple, but inefficient, especially when the system consists only of Tchebichef moments. Likewise, the latter approach is complicated, mainly because of the method used to formulate the invariant algorithm. Hence, in this paper, we introduce a new set of translation, rotation and scale Tchebichef moment invariants (TRSI) using moment normalization, which is much computationally efficient and accurate. This is achieved by formulating the recurrence relationship of the descriptors and successfully resolve uniqueness issues of principal axis normalization. Experimental studies show that the proposed method is computationally much faster and possesses higher discriminative power in classification when compared with present invariant algorithms. The main contribution of this paper is a novel fast computational algorithm that simplifies translation, rotation and scale invariant algorithms of Tchebichef moments and a novel normalization scheme that preserve invariants’ orthogonality from the moment functions. The technique can be deployed to derive affine invariants of Tchebichef moments, and invariants for other orthogonal moments like Krawtchouk, Hahn, Racah moments etc.

Abstract Background Analysis of heterogeneous populations such as viral quasispecies is one of the most challenging bioinformatics problems. Although machine learning models are becoming to be widely employed for analysis of sequence data from such populations, their straightforward application is impeded by multiple challenges associated with technological limitations and biases, difficulty of selection of relevant features and need to compare genomic datasets of different sizes and structures. Results We propose a novel preprocessing approach to transform irregular genomic data into normalized image data. Such representation allows to restate the problems of classification and comparison of heterogeneous populations as image classification problems which can be solved using variety of available machine learning tools. We then apply the proposed approach to two important problems in molecular epidemiology: inference of viral infection stage and detection of viral transmission clusters using next-generation sequencing data. The infection staging method has been applied to HCV HVR1 samples collected from 108 recently and 257 chronically infected individuals. The SVM-based image classification approach achieved more than 95% accuracy for both recently and chronically HCV-infected individuals. Clustering has been performed on the data collected from 33 epidemiologically curated outbreaks, yielding more than 97% accuracy. Conclusions Sequence image normalization method allows for a robust conversion of genomic data into numerical data and overcomes several issues associated with employing machine learning methods to viral populations. Image data also help in the visualization of genomic data. Experimental results demonstrate that the proposed method can be successfully applied to different problems in molecular epidemiology and surveillance of viral diseases. Simple binary classifiers and clustering techniques applied to the image data are equally or more accurate than other models.

CNC display (Computer Numerical Control)is an important source of information on industrial production equipment operation (e.g., it shows errors in real-time). In this paper, we consider the direct monitoring problem for a CNC display to automatically detect error codes and analyze their sequences. We present our pilot service implementation, which uses real-life production equipmenta VARIA machine with CNC SINUMERIK 840D sl system.

The star identification (star-ID) algorithm can match the stars captured by an optical system with a star catalog according to certain features. Star-ID has been an important research issue in many astronomical studies and a strong robust star-ID algorithm can effectively identify a certain number of stars as a standard source to correct uncalibrated telescopes. Generally, before star-ID, the celestial coordinates should be translated into the image coordinates with knowledge of optical center coordinates, image rotation angle, focal length of optical system, image sensor's pixel size and so on. For an uncalibrated telescope, the star-ID performance usually suffers from the errors or even the lack of these parameters. In this paper, a novel star-ID algorithm is devised which is based on image normalization technique and the Zernike moment such that the invariant features of asterisms are extracted instead of traditional ways. And three real images which captured via an uncalibrated ground-based telescope are used to validate our method, and the results show that it can effectively identify stars with a success rate of 99.27%, which demonstrate the robustness and accuracy of the proposed method.

Primary Central Nervous System Lymphoma (PCNSL) is an aggressive neoplasm with a poor prognosis. Although therapeutic progresses have significantly improved Overall Survival (OS), a number of patients do not respond to HD–MTX-based chemotherapy (15–25%) or experience relapse (25–50%) after an initial response. The reasons underlying this poor response to therapy are unknown. Thus, there is an urgent need to develop improved predictive models for PCNSL. In this study, we investigated whether radiomics features can improve outcome prediction in patients with PCNSL. A total of 80 patients diagnosed with PCNSL were enrolled. A patient sub-group, with complete Magnetic Resonance Imaging (MRI) series, were selected for the stratification analysis. Following radiomics feature extraction and selection, different Machine Learning (ML) models were tested for OS and Progression-free Survival (PFS) prediction. To assess the stability of the selected features, images from 23 patients scanned at three different time points were used to compute the Interclass Correlation Coefficient (ICC) and to evaluate the reproducibility of each feature for both original and normalized images. Features extracted from Z-score normalized images were significantly more stable than those extracted from non-normalized images with an improvement of about 38% on average (p-value < 10−12). The area under the ROC curve (AUC) showed that radiomics-based prediction overcame prediction based on current clinical prognostic factors with an improvement of 23% for OS and 50% for PFS, respectively. These results indicate that radiomics features extracted from normalized MR images can improve prognosis stratification of PCNSL patients and pave the way for further study on its potential role to drive treatment choice.

Art design is based on art and images, in which dynamic images require pre-processing and fusion. This paper explores how to apply the dynamic image fusion technology in the development of the innovation capabilities of college students majoring in art design. The research results show that image sequences with different exposures can be directly formed into low dynamic range images through multi-exposure fusion, or the high dynamic range can be restored first, and then converted to a low dynamic range image through tone mapping. The main principles for innovation development in art design education include conformity, student-centeredness, and overall optimization. The dynamic image fusion enhancement algorithm is mainly divided into five functional modules, which are used to calculate multi-scale gradient, structure tensor, and target gradient for the fused image, solve the steepest descent method and output normalized images, respectively. [ABSTRACT FROM AUTHOR]

Normalization is a step in image processing that is used to reduce lighting and contrast effects, significantly increasing the accuracy of the entire solution. The face detection algorithm proposed by Viola-Jones popularized the image normalization process. The basis of this process consists in obtaining the integral image and its square integral. This process requires a greater amount of computational resources, being then avoided, particularly in embedded systems, even if it compromises the result of the solution. In this article we propose a way to implement the image normalization process from the integral of that image already stored in memory, without increasing the amount of external memory, accessing each value of integral stored only twice. [ABSTRACT FROM AUTHOR]

Automatic classification of brain tumor types is essential to accelerate the treatment process and increase the patient's survival rate. In today's world, magnetic resonance imaging is used for determining the brain tumor types in an effective manner. The manual classification of brain tumor consumes more time and also applicable for a limited number of images, so a deep learning-based model is proposed in this research paper for automatic classification of brain tumor types. At first, the brain images are collected from T1-weighted contrast-enhanced magnetic resonance image dataset. Then, the normalization technique and histogram of oriented gradients are employed to improve the visible level of the collected raw brain images and to extract the feature vectors from the normalized brain images. The histogram descriptor effectively describes the edge and contour features of the images related to other feature descriptors. Further, the extracted features are given as the input to convolutional neural networks to classify meningiomas, gliomas, and pituitary tumors. The hard swish-based RELU activation function is included in convolutional neural networks that effectively improve the classification performance and learning speed. In the experimental phase, the proposed model achieved 98.6% of accuracy that is better compared to the existing algorithms like deep convolutional neural network with transfer learning and fine-tuning. [ABSTRACT FROM AUTHOR]

Recently, the multimedia complexity is noticeably increased due to the growth of internet and multimedia technologies and it has become one of the prime research topics in multimedia content retrieval. In this research, a dual phase model is proposed to enhance the performance of content based image retrieval. Initially, normalization technique is employed to improve the visibility level of the images that are collected from Wang and COREL datasets. Next, color moments and Alex-Net convolutional neural network are used to extract the feature values from the normalized image. By combining low and high level features, the semantic space between the extracted feature values is less that helps in retrieving the relevant content images significantly. Finally, the Manhattan distance measure is applied to measure the distance between the query image and an image dataset to retrieve the relevant images. The experimental result showed that the proposed dual phase model achieved better performance in content based image retrieval by means of recall, precision and f-score. From the comparative analysis, the proposed dual phase model showed a maximum of 0.43 precision value and 0.06 recall value improvement in content based image retrieval compared to the existing works like Bi-layer system, spatial and frequency domain features with Euclidean distance, and local directional pattern with color histograms. [ABSTRACT FROM AUTHOR]

Changes in ventricular size, related to brain edema and hydrocephalus, as well as the extent of hemorrhage are associated with adverse outcomes in patients with subarachnoid hemorrhage (SAH). Frequently, these are measured manually using consecutive non-contrast computed tomography scans. Here, we developed a rule-based approach which incorporates both intensity and spatial normalization and utilizes user-defined thresholds and anatomical templates to segment both lateral ventricle (LV) and SAH blood volumes automatically from CT images. The algorithmic segmentations were evaluated against two expert neuroradiologists on representative slices from 20 admission scans from aneurysmal SAH patients. Previous methods have been developed to automate this time-consuming task, but they lack user feedback and are hard to implement due to large-scale data and complex design processes. Our results using automatic ventricular segmentation aligned well with expert reviewers with a median Dice coefficient of 0.81, AUC of 0.91, sensitivity of 81%, and precision of 84%. Automatic segmentation of SAH blood was most reliable near the base of the brain with a median Dice coefficient of 0.51, an AUC of 0.75, precision of 68%, and sensitivity of 50%. Ultimately, we developed a rule-based method that is easily adaptable through user feedback, generates spatially normalized segmentations that are comparable regardless of brain morphology or acquisition conditions, and automatically segments LV with good overall reliability and basal SAH blood with good precision. Our approach could benefit longitudinal studies in patients with SAH by streamlining assessment of edema and hydrocephalus progression, as well as blood resorption., Competing Interests: Declaration of conflicting interestsThe author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.

Background: Previous histopathology and MRI studies have addressed the differences between focal white matter lesions (FWML) and diffusely abnormal white matter (DAWM) in multiple sclerosis (MS). These two categories of white matter T2-weighted (T2w) hyperintensity show different degrees of demyelination, axonal loss and immune cell density on histopathology, potentially offering distinct correlations with symptoms. Objectives: 1) To automate the separation of FWML and DAWM using T2w MRI intensity thresholds and to investigate their differences in magnetization transfer ratios (MTR), which are sensitive to myelin content; 2) to correlate MTR values in FWML and DAWM with normalized signal intensity values on fluid attenuated inversion recovery (FLAIR), T2w, and T1-weighted (T1w) contrasts, as well as with the ratio of T2w/T1w normalized values, in order to determine whether these normalized intensities can be used when MTR is not available. Methods: We used three MRI datasets: datasets 1 and 2 had 20 MS participants each, scanned with similar 3T MRI protocols in 2 centers, including: 3D T1w (MP2RAGE), 3D FLAIR, 2D T2w, and 3D magnetization-transfer (MT) contrasts. Dataset 3 consisted of 67 scans of participants enrolled in a multisite study and had T1w and T2w contrasts. We used the first dataset to develop an automated technique to separate FWML from DAWM and the second and third to validate the automation of the technique. We applied the automatic thresholds to all datasets to assess the overlap of the manual and the automated masks using Dice kappa. We also assessed differences in mean MTR values between NAWM, DAWM and FWML, using manually and automatically derived masks in datasets 1 and 2. Finally, we used the mean intensity of manually-traced areas of NAWM on T2w images as the normalization factor for each MRI contrast, and compared these with the normalized-intensity values obtained using automated NAWM (A-NAWM) masks as the normalization factor. ANOVA assessed the MTR differences across tissue types. Paired t-test or Wilcoxon signed-ranked test assessed FWML and DAWM differences between manual and automatically derived volumes. Pearson correlations assessed the relationship between MTR and normalized intensity values in the manual and automatically derived masks. Results: The mean Dice-kappa values for dataset 1 were: 0.79 for DAWM masks and 0.90 for FWML masks. In dataset 2, mean Dice-kappa values were: 0.78 for DAWM and 0.87 for FWML. In dataset 3, mean Dice-kappa values were 0.72 for DAWM, and 0.87 for FWML. Manual and automated DAWM and FWML volumes were not significantly different in all datasets. MTR values were significantly lower in manually and automatically derived FWML compared with DAWM in both datasets (dataset 1 manual: F ​= ​111,08, p ​

Background: Analysis of heterogeneous populations such as viral quasispecies is one of the most challenging bioinformatics problems. Although machine learning models are becoming to be widely employed for analysis of sequence data from such populations, their straightforward application is impeded by multiple challenges associated with technological limitations and biases, difficulty of selection of relevant features and need to compare genomic datasets of different sizes and structures. Results: We propose a novel preprocessing approach to transform irregular genomic data into normalized image data. Such representation allows to restate the problems of classification and comparison of heterogeneous populations as image classification problems which can be solved using variety of available machine learning tools. We then apply the proposed approach to two important problems in molecular epidemiology: inference of viral infection stage and detection of viral transmission clusters using next-generation sequencing data. The infection staging method has been applied to HCV HVR1 samples collected from 108 recently and 257 chronically infected individuals. The SVM-based image classification approach achieved more than 95% accuracy for both recently and chronically HCV-infected individuals. Clustering has been performed on the data collected from 33 epidemiologically curated outbreaks, yielding more than 97% accuracy. Conclusions: Sequence image normalization method allows for a robust conversion of genomic data into numerical data and overcomes several issues associated with employing machine learning methods to viral populations. Image data also help in the visualization of genomic data. Experimental results demonstrate that the proposed method can be successfully applied to different problems in molecular epidemiology and surveillance of viral diseases. Simple binary classifiers and clustering techniques applied to the image data are equally or more accurate than other models. [ABSTRACT FROM AUTHOR]

• Normalizing images with respect to healthy prostate tissue is optimal. • Histogram-based normalization should be used otherwise. • Over 87% of radiomic features drastically change after normalization. • Improper normalization is worse than no normalization. The variance in intensities of MRI scans is a fundamental impediment for quantitative MRI analysis. Intensity values are not only highly dependent on acquisition parameters, but also on the subject and body region being scanned. This warrants the need for image normalization techniques to ensure that intensity values are consistent within tissues across different subjects and visits. Many intensity normalization methods have been developed and proven successful for the analysis of brain pathologies, but evaluation of these methods for images of the prostate region is lagging. In this paper, we compare four different normalization methods on 49 T2-w scans of prostate cancer patients: 1) the well-established histogram normalization, 2) the generalized scale normalization, 3) an extension of generalized scale normalization called generalized ball-scale normalization, and 4) a custom normalization based on healthy prostate tissue intensities. The methods are compared qualitatively and quantitatively in terms of behaviors of intensity distributions as well as impact on radiomic features. Our findings suggest that normalization based on prior knowledge of the healthy prostate tissue intensities may be the most effective way of acquiring the desired properties of normalized images. In addition, the histogram normalization method outperform the generalized scale and generalized ball-scale methods which have proven superior for other body regions. [ABSTRACT FROM AUTHOR]

• A tool to manually refine mismatches after image normalization. • It is particularly useful in challenging normalization cases, such as atrophied brains. • Within an Alzheimer's disease deep brain stimulation cohort, it helped create meaningful models to explain patient outcome. • WarpDrive is available from a 3D Slicer extension and within the Lead-DBS software. Spatial normalization—the process of mapping subject brain images to an average template brain—has evolved over the last 20+ years into a reliable method that facilitates the comparison of brain imaging results across patients, centers & modalities. While overall successful, sometimes, this automatic process yields suboptimal results, especially when dealing with brains with extensive neurodegeneration and atrophy patterns, or when high accuracy in specific regions is needed. Here we introduce WarpDrive, a novel tool for manual refinements of image alignment after automated registration. We show that the tool applied in a cohort of patients with Alzheimer's disease who underwent deep brain stimulation surgery helps create more accurate representations of the data as well as meaningful models to explain patient outcomes. The tool is built to handle any type of 3D imaging data, also allowing refinements in high-resolution imaging, including histology and multiple modalities to precisely aggregate multiple data sources together. [ABSTRACT FROM AUTHOR]

Illumination variations in non-atmospherically corrected high-resolution satellite (HRS) images acquired at different dates/times/locations pose a major challenge for large-area environmental mapping and monitoring. This problem is exacerbated in cases where a classification model is trained only on one image (and often limited training data) but applied to other scenes without collecting additional samples from these new images. In this research, by focusing on caribou lichen mapping, we evaluated the potential of using conditional Generative Adversarial Networks (cGANs) for the normalization of WorldView-2 (WV2) images of one area to a source WV2 image of another area on which a lichen detector model was trained. In this regard, we considered an extreme case where the classifier was not fine-tuned on the normalized images. We tested two main scenarios to normalize four target WV2 images to a source 50 cm pansharpened WV2 image: (1) normalizing based only on the WV2 panchromatic band, and (2) normalizing based on the WV2 panchromatic band and Sentinel-2 surface reflectance (SR) imagery. Our experiments showed that normalizing even based only on the WV2 panchromatic band led to a significant lichen-detection accuracy improvement compared to the use of original pansharpened target images. However, we found that conditioning the cGAN on both the WV2 panchromatic band and auxiliary information (in this case, Sentinel-2 SR imagery) further improved normalization and the subsequent classification results due to adding a more invariant source of information. Our experiments showed that, using only the panchromatic band, F1-score values ranged from 54% to 88%, while using the fused panchromatic and SR, F1-score values ranged from 75% to 91%.

Many research applications of neuroimaging use magnetic resonance imaging (MRI). As such, recommendations for image analysis and standardized imaging pipelines exist. Clinical imaging, however, relies heavily on X-ray computed tomography (CT) scans for diagnosis and prognosis. Currently, there is only one image processing pipeline for head CT, which focuses mainly on head CT data with lesions. We present tools and a complete pipeline for processing CT data, focusing on open-source solutions, that focus on head CT but are applicable to most CT analyses. We describe going from raw DICOM data to a spatially normalized brain within CT presenting a full example with code. Overall, we recommend anonymizing data with Clinical Trials Processor, converting DICOM data to NIfTI using dcm2niix, using BET for brain extraction, and registration using a publicly-available CT template for analysis.

Spatial registration is an essential step in the analysis of fMRI data because it enables between-subject analyses of brain activity, measured either during task performance or in the resting state. In this study, we investigated how anatomical registration with MRTOOL affects the reliability of task-related fMRI activity. We used as a benchmark the results from two other spatial registration methods implemented in SPM12: the Unified Segmentation algorithm and the DARTEL toolbox. Structural alignment accuracy and the impact on functional activation maps were assessed with high-resolution T1-weighted images and a set of task-related functional volumes acquired in 10 healthy volunteers. Our findings confirmed that anatomical registration is a crucial step in fMRI data processing, contributing significantly to the total inter-subject variance of the activation maps. MRTOOL and DARTEL provided greater registration accuracy than Unified Segmentation. Although DARTEL had superior gray matter and white matter tissue alignment than MRTOOL, there were no significant differences between DARTEL and MRTOOL in test-retest reliability. Likewise, we found only limited differences in BOLD activation morphology between MRTOOL and DARTEL. The test-retest reliability of task-related responses was comparable between MRTOOL and DARTEL, and both proved superior to Unified Segmentation. We conclude that MRTOOL, which is suitable for single-subject processing of structural and functional MR images, is a valid alternative to other SPM12-based approaches that are intended for group analysis. MRTOOL now includes a normalization module for fMRI data and is freely available to the scientific community. [ABSTRACT FROM AUTHOR]

Many research applications of neuroimaging use magnetic resonance imaging (MRI). As such, recommendations for image analysis and standardized imaging pipelines exist. Clinical imaging, however, relies heavily on X-ray computed tomography (CT) scans for diagnosis and prognosis. Currently, there is only one image processing pipeline for head CT, which focuses mainly on head CT data with lesions. We present tools and a complete pipeline for processing CT data, focusing on open-source solutions, that focus on head CT but are applicable to most CT analyses. We describe going from raw DICOM data to a spatially normalized brain within CT presenting a full example with code. Overall, we recommend anonymizing data with Clinical Trials Processor, converting DICOM data to NIfTI using dcm2niix, using BET for brain extraction, and registration using a publicly-available CT template for analysis. [ABSTRACT FROM AUTHOR]

This paper presents a novel approach for image enhancement. In the proposed method, retinal image is divided into three sub-parts, optic disc region, vessels region and non-vessels region (black region outside vessels). Color image enhancement is then performed on these three regions in HSV domain. Then the color image is converted to gray using a multi-scale line detector based technique. For vessel detection, a modified Frangi vessels detector is used. This filter produces a nearly uniform response in every vascular structure and precisely boosts the border between the background and the vascular structures. This filter accomplished the best result in segmentation quantitative metrics performance, vessel enhancement signal-to-noise ratio and uniformity of the response in vascular structures as compared to other filters. Excremental results show that the performance of modified Frangi method is much better than the old Frangi and also comparable with most of the state-of-the-art methods. [ABSTRACT FROM AUTHOR]

Super-pixel feature extraction is a key problem to get an acceptable performance in color super-pixel classification. Given a color feature extraction problem, it is necessary to know which is the best approach to solve this problem. In the current work, we're interested in the challenge of nucleus and cytoplasm automatic recognition in the cytological image. We propose an automatic process for white blood cells (WBC) segmentation using super-pixel classification. The process is divided into five steps. In first step, the color normalization is calculated. The super-pixels generation by Simple Linear Iterative Clustering algorithm is performed in the second step. In third step, the color property is used to achieve illumination invariance. In fourth step, color features are calculated on each super-pixel. Finally, supervised learning is realized to classify each super-pixel into nucleus and cytoplasm region. The present work rallied an exhaustive statistical evaluation of a very wide variety of the color super-pixel classification, with height normalization methods, four-color spaces and four feature extraction techniques. Normalization and color spaces slightly increase the average accuracy of super-pixel classification. Our experiments based to statistical comparison allow to conclude that comprehensive gray world normalized normalization is better than without normalization for super-pixel classification achieving the first positions in the Friedman ranking. RGB space is the best color spaces to be used in super-pixel feature extraction for nucleus and cytoplasm segmentation. For feature extraction, the learning methods work better on the first order statistics features for the automatic WBC segmentation. [ABSTRACT FROM AUTHOR]