Search

‘Glass’ squids (family Cranchiidae Prosch, 1849) are diverse and widely distributed, but many cranchiid genera are in need of global taxonomic revision. Although two species of Taonius are generally recognised from the Pacific Ocean (T. belone and T. borealis), a recent review of material from this basin has revealed the presence of at least six species, including at least four new to science, described here as T. expolitus, T. notalia, T. robisoni, and T. tanuki. Morphological species identities are supported by several characters, including arm sucker count, and arm and manus sucker dentition. Proposed species delimitations are further supported by differences in mitochondrial DNA (cytochrome c oxidase subunit I). Although a full systematic review of the Cranchiidae is still needed tripling the known diversity of Taonius in the Pacific Ocean and clarifying identities of its locally occurring species represent an important step forward. [ABSTRACT FROM AUTHOR]

The subfamily Seirinae (Collembola: Entomobryidae) is among the most diverse suprageneric taxa of epedaphic springtails and is particularly abundant and species-rich in tropical and subtropical regions. Numerous studies have investigated its internal and external phylogenetic relationships, enhancing our understanding on Seirinae systematics. Recent taxonomic efforts have also advanced our knowledge on the subfamily morphology and diversity. In this study, we reevaluate the phylogeny of Seirinae using the mitogenomes of 26 samples from different continents, aiming to discuss recent findings regarding the group systematics, to identify cases of alien species introduced in China and Thailand, and propose new synonyms for Seira spp. Additionally, we describe a new species from Thailand and provide a redescription of Seira brasiliana (Arlé) based on the study of Brazilian and Chinese specimens. Through these efforts, we provide further ground for understanding the evolution, systematics, distribution and taxonomy of the group, contributing to future studies on Seirinae and Entomobryidae. [ABSTRACT FROM AUTHOR]

An integrative taxonomic approach, combining new morphological data with the analysis of partial COI sequences (DNA-barcodes) is used to describe Lebertia litoralis Zawal & Szenejko sp. nov. from lake habitats in Poland and Norway. The obtained DNA-barcodes of Polish and Norwegian specimens differ only slightly (k = 4.142, Π = 0.006). Morphologically, the new species is most similar to Lebertia porosa Thor, 1900 and L. obscura Thor, 1900, from which it differs by a slenderer shape of the first leg and the position of the distoventral setae of p-4, inserted rather far away from the distal segment edge. [ABSTRACT FROM AUTHOR]

Gastrotrichs of the genus Chaetonotus Ehrenberg, 1830 (Chaetonotida, Chaetonotidae) are known to be a speciose and pervasive group in both the marine and freshwater ecosystems, and recent investigations indicate that there is a significant amount of species diversity yet to be discovered. In the present study, a new species of this genus is described from two quarry lakes in northern Italy and characterized using an integrative morphological and molecular approach. Chaetonotus polites n. sp. is recognized by a rather stocky body, a five-lobed head, and the cuticular covering resolved in 13 alternating columns of partially imbricated scales, trilobed on the head and pentagonal on the trunk; each scale bears a peculiar simple, very thick, curved spine with a truncated apex. The new species is also distinguished by four putative molecular apomorphies at the 18S rRNA gene and two at the 28S rRNA gene. The location and type of these unique traits in the predicted secondary structure of the ribosomal genes is provided. The phylogenetic analysis based on concatenated sequences of three genes (the nuclear 18S and 28S rRNA genes and the mitochondrial COI gene) derived from 123 selected chaetonotidans, including the novel species, confirms that the genus Chaetonotus is a polyphyletic group, with several of its members resolved together with species of other genera. The new species forms a cluster with species of the subgenus Hystricochaetonotus Schwank 1990, suggestive of its potential stem lineage. [ABSTRACT FROM AUTHOR]

The application of traditional morphological and ecological species concepts to closely related, asexual fungal taxa is challenging due to the lack of distinctive morphological characters and frequent cosmopolitan and plurivorous behaviour. As a result, multilocus sequence analysis (MLSA) has become a powerful and widely used tool to recognise and delimit independent evolutionary lineages (IEL) in fungi. However, MLSA can mask discordances in individual gene trees and lead to misinterpretation of speciation events. This phenomenon has been extensively documented in Diaporthe, and species identifications in this genus remains an ongoing challenge. However, the accurate delimitation of Diaporthe species is critical as the genus encompasses several cosmopolitan pathogens that cause serious diseases on many economically important plant hosts. In this regard, following a survey of palm leaf spotting fungi in Lisbon, Portugal, Diaporthe species occurring on Arecaceae hosts were used as a case study to implement an integrative taxonomic approach for a reliable species identification in the genus. Molecular analyses based on the genealogical concordance phylogenetic species recognition (GCPSR) and DNA-based species delimitation methods revealed that speciation events in the genus have been highly overestimated. Most IEL identified by the GCPSR were also recognised by Poisson tree processes (PTP) coalescent-based methods, which indicated that phylogenetic lineages in Diaporthe are likely influenced by incomplete lineage sorting (ILS) and reticulation events. Furthermore, the recognition of genetic recombination signals and the evaluation of genetic variability based on sequence polymorphisms reinforced these hypotheses. New clues towards the intraspecific variation in the common loci used for phylogenetic inference of Diaporthe species are discussed. These results demonstrate that intraspecific variability has often been used as an indicator to introduce new species in Diaporthe, which has led to a proliferation of species names in the genus. Based on these data, 53 species are reduced to synonymy with 18 existing Diaporthe species, and a new species, D. pygmaeae, is introduced. Thirteen new plant host-fungus associations are reported, all of which represent new host family records for Arecaceae. This study has recognised and resolved a total of 14 valid Diaporthe species associated with Arecaceae hosts worldwide, some of which are associated with disease symptoms. This illustrates the need for more systematic research to examine the complex of Diaporthe taxa associated with palms and determine their potential pathogenicity. By implementing a more rational framework for future studies on species delimitation in Diaporthe, this study provides a solid foundation to stabilise the taxonomy of species in the genus. Guidelines for species recognition, definition and identification in Diaporthe are included. [ABSTRACT FROM AUTHOR]

Cortinarius (Fr.) Fr. is one of the most species-rich genera in the Agaricales (Basidiomycota). Cortinarius subgen. Dermocybe (Fr.) Trog includes brightly coloured Cortinarii with anthraquinone pigments. The chemotaxonomic approach has always been as important as classical methods for species definition of Dermocybe and helped to improve overall species concepts. However, some species concepts within this group remain unclear. We therefore address this topic based on a combined phylogenetic, morphological, and pigment-chemical approach. For this, sequence data, HPLC–MS pigment profiles and spore sizes were included were included to obtain a better resolution of taxa. The study was based on 173 recent collections and 12 type specimens. A total of 117 rDNA ITS sequences were produced from the collections in this study, 102 sequences were retrieved from databases. We could detect and clearly delimit 19 Dermocybe species occurring in central European habitats, from which 16 are discussed in detail. Additionally, we grouped the detected anthraquinone pigments into four groups. This detailed analysis of dermocyboid Cortinarius species occurring in a restricted number of habitat types confirmed our hypothesis that species diversity is much higher than currently assumed. This high diversity is blurred by too wide and incorrect species concepts of several classical species like C. croceus and C. cinnamomeus. Molecular and chemotaxonomical studies carried out together with careful phenotypical analyses resulted in a good differentiation of species. A key is presented for these taxa to allow a better identification of Cortinarius subgenus Dermocybe spp. occurring in Central Europe mainly in the alpine range. [ABSTRACT FROM AUTHOR]

Scarabaeoidea is a diverse and widely distributed insect group; many are agricultural pests including species within the genus Phyllophaga. Species diversity studies in this taxonomic group are done mainly using morphological identification. However, despite existing taxonomic keys for adults and larvae, identification may be difficult due to their complex morphology. Molecular taxonomy can increase the value and accuracy of morphological species identification of larvae and adults. To test this, larvae collected from soil close to maize plants were identified using molecular taxonomy, and compared with adults captured using light traps. The larvae (2021) and adults (2022) were sampled on maize at the same locations in central Mexico. Molecular identification was achieved using three regions within the Cytochrome oxidase gene (cox), two in the Cytochrome c oxidase subunit 1 (cox1), Cytochrome b (CytB) and 28S rDNA. Cox gene information was more useful than nuclear information (28S). Combined morphological and molecular taxonomy of adults distinguished between seven Phyllophaga species. Although two closely related species, P. polyphyla and P. ravida , were distinguished using cox gene information, greater resolution was obtained using CytB. All analyses identified cryptic species within P. vetula. Species found amongst sampled adults were similar to those found amongst larvae. However, the number of species was greater in adults than in larvae at the same locations. Larval information showed Phyllophaga community structure changed over time. Our findings will contribute to a better understanding of Phyllophaga's ecology in maize. [ABSTRACT FROM AUTHOR]

For nearly four decades, harlequin toads, genus Atelopus, have suffered unparalleled population declines. While this also results in limited understanding of alphataxonomic relationships, these toads face an urgent need for advances in systematics to inform conservation efforts. However, high intraspecific variation and cryptic diversity have hindered a comprehensive understanding of Atelopus diversity. This is particularly exemplified among Amazonian populations related to A. spumarius, where decades of taxonomic work have not been able yet to unravel relationships between the many forms, while the names coined so far have led to taxonomic confusion leaving numerous lineages unnamed. A recent comprehensive phylogenetic study has revealed new insights into the systematics of harlequin toads with an emphasis on Amazonian forms, identifying several unnamed lineages. We here describe one of these evolutionary lineages as a new species, restricted to the Ecuadorian Amazon basin, in an integrative taxonomic approach using molecular, morphological, bioacoustic and larval information. With this, we contribute to a better understanding of Atelopus diversity as the baseline of conservation action. [ABSTRACT FROM AUTHOR]

We describe two new caecilian species of the genus Caecilia (Gymnophiona: Caeciliidae) from the wet tropical Chocó Forest, north-western Ecuador. We applied an integrative taxonomic approach, taking into consideration external morphology, osteology from intensive ct-scanning, and molecular phylogenetic analyses. The two new species were compared to all other Caecilia species, known to occur west of the Ecuadorian and Colombian Andes. The new taxa can be distinguished by their external morphological characters, as well as by their osteology, genetic divergence, and phylogenetic relationships. The two new species, although morphologically quite different, were closely related. Caecilia tesoro sp. n. is a large-bodied, robust species with a unique colour pattern in larger individuals. In contrast, Caecilia truncata sp. n. is a smaller caeciliid and sister to medium-sized C. volcani, a species known from Panama. Morphologically, C. truncata sp. n. is best recognized by a very truncated snout shape. As know from many previously recognized neotropical caeciliids, both new species are likely endemic to small ranges, here the humid tropical lowland to mid-altitude forests of western Ecuador. Both new species seem to tolerate some degree of habitat degradation. Our new findings support to intensify research and conservation activities in one of South America's most diverse but severely endangered biomes. We also present, for the first time, some clues of the phylogenetic position of elongated C. nigricans and C. leucocephala. Caecilia nigricans was sister to a clade composed of one Oscaecilia and ten species of Caecilia. This topology rendered the genus Caecilia paraphyletic relative to Oscaecilia. [ABSTRACT FROM AUTHOR]

The Pleidae, or pygmy backswimmers, is a family of aquatic bugs (Hemiptera, Heteroptera, Nepomorpha) containing four genera. Here, we describe Plea cryptica sp. nov. and redescribe its sister species, Plea minutissima Leach, 1817. Whereas the morphological distinction of these closely related species is only possible for males, molecular data clearly separate them. As part of our taxonomic study, we provide comprehensive molecular data including more than 200 DNA barcodes from all over Europe, complete nuclear ribosomal DNA, full mitochondrial genome data, and 3D scans for both species. Furthermore, the same molecular markers are also presented for Neoplea striola (Fieber, 1844). We used Maximum Likelihood (ML) analyses to reconstruct the phylogeny of the Pleidae and Notonectoidea based on available mitogenomic data. Our study represents a successful implementation of the proposed concept of taxonomics, using data from high-throughput sequencing technologies for integrative taxonomic studies, and allowing high confidence for both biodiversity and ecological research. [ABSTRACT FROM AUTHOR]

Accurate taxonomic classification of deep-sea taxa is often impeded by the presence of highly morphologically similar but genetically distinct species. This issue is particularly pronounced in the isopods of the deep-sea family Macrostylidae, which exhibit remarkably low morphological variation despite significant genetic diversity. In this study, we present the first application of geometric morphometric techniques to 41 specimens across five species of deep-sea macrostylid isopods collected from Icelandic waters. Our results suggest that geometric morphometric techniques can effectively discriminate between macrostylid species. These techniques, hence, promise to be an important addition to the toolset of macrostylid taxonomists. [ABSTRACT FROM AUTHOR]

The identification of spider species presents many challenges, since in most cases the characters used are from genital structures that are only fully developed in the adult stage, hence the identification of immatures is most often not possible. Additionally, these structures usually also present some intra-specific variability, which in some cases makes the identification of closely related species difficult. The genetic barcode technique (DNA barcodes), based on sequencing of the mitochondrial marker cytochrome c oxidase subunit I (COI), has proven a useful, complementary tool to overcome these limitations. In this work, the contribution of DNA barcoding to the taxonomy of the subfamily Amaurobioidinae is explored using the refined single linkage analysis (RESL) algorithm for the delimitation of operational taxonomic units (OTUs), in comparison with the assemble species by automatic partitioning (ASAP) algorithm, and presented in conjunction with an updated molecular phylogenetic analysis of three other markers (28S rRNA, 16S rRNA, Histone H3), in addition to COI. Of a total of 97 included species identified by morphology, 82 species were concordant with the operational taxonomic units obtained from RESL, representing an 85% correspondence between the two methods. Similar results were obtained using the ASAP algorithm. Previous observations of morphological variation within the same species are supported, and this technique provides new information on genetic structure and potentially cryptic species. Most of the discrepancies between DNA barcoding and morphological identification are explained by low geographic sampling or by divergent or geographically structured lineages. After the addition of many specimens with only COI data, the multi-marker phylogenetic analysis is consistent with previous results and the support is improved. The markers COI , closely followed by 28S , are the most phylogenetically informative. We conclude that the barcode DNA technique is a valuable source of data for the delimitation of species of Amaurobioidinae, in conjunction with morphological and geographic data, and it is also useful for the detection of cases that require a more detailed and meticulous study. Taxonomic identification of spider species from morphological structures has limitations in cases of closely related species or intraspecific variability. We investigate the utility of genetic barcoding with the mitochondrial marker cytochrome c oxidase I (COI) in ghost spiders of the subfamily Amaurobioidinae. Most discrepancies between DNA barcoding and morphological identification are explained by low geographic sampling or by geographically structured lineages. In addition, we show that the marker COI is phylogenetically informative for deeper nodes in the tree. (Image credit: Martín Ramírez.) [ABSTRACT FROM AUTHOR]

Australian salt lakes contain a diverse range of endemic invertebrates. The brine shrimp Parartemia is among the most speciose and salt-tolerant of these invertebrates. The morphotaxonomy of Parartemia is well established but there has only been limited molecular assessment of the phylogenetic relationships and boundaries of the morphospecies. We used multiple genetic markers (nuclear 28S and mitochondrial 16S and COI) and tree-building methods (Bayesian inference and maximum likelihood) to investigate the phylogeny of Parartemia. We also used species delimitation methods to test the validity of morphological species designations. The data set included all but 2 of the 18 described Parartemia morphospecies, collected from a total of 93 sites from across southern Australia plus some sequences from GenBank. The results identified large amounts of molecular divergence (e.g. COI P- values of up to 25.23%), some groups of closely related species (which also usually shared some morphological similarities) and some distinctive species, although the relationships among divergent lineages were generally not well resolved. The most conservative set of results from the species delimitation analyses suggests that the morphotaxonomy is largely accurate, although many morphospecies comprised divergent genetic lineages separated by COI P- values of up to 17.02%. Two putative new morphospecies, three cryptic species and one synonymy were identified. Our findings improve the knowledge of Parartemia taxonomy and will facilitate the development of future studies and conservation of this taxon. The brine shrimp Parartemia is a diverse, salt-tolerant genus found in Australian salt lakes. Its current taxonomy is mainly based on morphological data. We used molecular data to investigate the number and relationships of Parartemia species and found two new morphospecies and three cryptic species. Although most species were valid, molecular divergence among and within some species was substantial. Our results confirm the species richness of the genus and our updated species list will aid in targeted conservation efforts. (Image credit: Md Aminul Islam.) [ABSTRACT FROM AUTHOR]

The predatory cladoceran Bythotrephes is one of North America's most successful and impactive invasive species in freshwater plankton communities. The taxonomic status of the genus Bythotrephes Leydig, 1860 (Crustacea: Cladocera: Cercopagididae) has remained unclear and a subject of intensive debate for over 150 years. We applied an integrative taxonomy approach with multi-gene analysis (mitochondrial COI and 12S genes, and nuclear 18S and 28S genes) on 80 individuals (representing at least four morphospecies) from various regions spanning the genus distribution (North America, Europe, and Asia) to resolve the taxonomic status of species within Bythotrephes. The results of our study strongly support the hypothesis of a single species— Bythotrephes longimanus Leydig, 1860, and ecological morphs should be accepted as junior synonyms. Our work also elucidates the very recent radiation of Bythotrephes , which may have begun rapidly and parallel during the Late Pleistocene, or even after the last glaciation. Finally, we provide a comprehensive biogeographic reconstruction of Bythotrephes dispersal within the Holarctic realm. Europe likely served as a dispersal centre for Bythotrephes from where they spread relatively recently (possibly, less than 10 kyr) and we distinguish five possible dispersal events in its evolutionary history. [ABSTRACT FROM AUTHOR]

Morchella helvetica, sp. nov. (Morchella sect. Distantes) is a new species of true morels discovered in Switzerland. It is formally described in the present study using an integrative approach based on micro- and macromorphological characteristics, multilocus phylogenetics, and a brief description of its habitat. Molecular analyses clearly indicated that Morchella helvetica is a sister species to M. eximioides, M. angusticeps, and M. confusa. It can be distinguished by the two phylogenetic markers RNA polymerase II subunit 2 (RPB2) and translation elongation factor-1 alpha (TEF1-α). In addition, M. helvetica exhibits particular morphological features, notably the presence of pale hairs on the pileus, a mealy stipe, and darkening ridges when aging. [ABSTRACT FROM AUTHOR]

The bryophyte genus Ulota has its main diversification area in Patagonia, with 18 currently accepted species, all of which are endemic to the area. Despite this richness, ongoing studies indicate the existence of hitherto unknown species in this territory. However, the strong resemblance between species often complicates the discrimination of new taxa, making the use of integrative taxonomy approaches compulsory. During surveys conducted in past decades, a morphotype of a Ulota , closely resembling Ulota macrodontia , was discovered coexisting with this species. Ulota macrodontia is characterized by unique peristomial features within the genus, and the variant morphotype shares these characteristics while displaying some distinct gametophytic and sporophytic features. Biometric analyses demonstrate that the differences are stable, and without intermediate states. The results obtained from the analyses of one nuclear and four plastid loci reveal a close relationship between both morphotypes, with the samples of U. macrodontia forming a well-supported monophyletic group. We propose to treat the new morphotype at species level (Ulota brachypoda sp. nov.), discussing why this is the most appropriate taxonomic rank, and we provide a detailed and illustrated description. Additionally, a distribution map of the two endemics is included. [ABSTRACT FROM AUTHOR]

Species extinctions increase at a global scale; therefore, rapid inventorying of our planet's biodiversity is becoming more and more important. As insects represent the highest portion of the fauna and play key ecological roles, it is a pressing need to investigate their biodiversity and accelerate species discovery, especially for understudied insect groups, also known as "dark taxa." Phoridae (Diptera) are a great example of a "dark taxon," in particular the genus Megaselia Rondani.The use of integrative methodologies is the best approach to face up to the task of describing hyperdiverse and dark taxa, as morphology alone can be imprecise and slow, and molecular methods alone are often insufficient and lead to errors.Here, we used the Large‐Scale Integrative Taxonomy (LIT) approach to sort 9000 Megaselia into 277 putative species based on DNA barcodes. Each cluster passed through an evaluation of the predictors for incongruence indices between clusters and morphology (maximum p‐distance, stability index), and a subset of specimens were morphologically examined.We provided species estimates with Chao1, and our results suggest a 15% increase in species richness on our dataset. As this estimate was mostly based on samples from southern Germany, the species count will likely increase with expanded geographic sampling. This is a step forward in the study of this taxon, despite the fact that the German insect fauna is one of the best known in Europe and boasts more than one hundred years of study on phorids. [ABSTRACT FROM AUTHOR]

In the temperate mixed oak forests of Central Europe, outbreaks of insects such as the spongy moth, Lymantria dispar, can cause severe defoliation and insecticide is sometimes applied for their control. Parasitoids, mainly Hymenoptera and Diptera, are among the most diverse and important natural enemies of caterpillars in these forests. However, due to their cryptic lifestyle and taxonomic difficulties, we lack knowledge on the impact of insecticide applications on complex host‐parasitoid networks.In a large‐scale field experiment, we tested the effect of spraying the lepidopteran‐specific insecticide Mimic (tebufenozide) on the abundance and community composition of both adult and larval parasitoids. We combined morphological identification, DNA barcoding and metabarcoding to identify parasitoids adult or inside caterpillars, both sampled by canopy fogging during an outbreak and two subsequent years. We analysed the abundance of parasitoids, community composition and network specialisation using statistical methods that account for sample incompleteness in host‐parasitoid data.For adult parasitoid assemblages, we found strong annual effects on abundance, with highest numbers of adult parasitoids occurring in the outbreak year, as well as on annual changes in community composition, but no effect linked to insecticide application. However, the abundance and species number of immature parasitoids revealed negative effects of insecticide application, while community composition was only affected by annual variation.Coverage‐based network analyses showed a reduction of taxonomic network diversity and network specialisation associated with insecticide application in the first 2 years.Synthesis and applications: This real‐world experiment shows that parasitoid populations respond immediately to large‐scale outbreaks but only limited to local disturbances. Results indicate that this group of natural enemies exhibits high mobility, enabling them to track host populations across large spatial scales. However, our observation of reduced network specialisation after insecticide application is a warning signal that ecosystem function, and consequently natural pest control services, may be impaired by human interference at the local stand scale. [ABSTRACT FROM AUTHOR]

We describe two new small-bodied species of South Asian Cnemaspis from Kanyakumari District of Tamil Nadu State, India. The two new species are sister taxa, forming a well-supported, previously unsampled clade of South Asian Cnemaspis that we name the kanyakumariensis clade. This new clade is recovered with weak support as the sister taxon to the goaensis clade. Both the new species together can be easily distinguished from all other peninsular Indian clades by a combination of non-overlapping morphological characters such as small size with snout to vent length < 40 mm, femoral pores only present in males, presence of spine-like tubercles on flanks, and condition of the subcaudals. They can also be distinguished from each other by several characters such as the number of dorsal tubercles around the body, short vs long spine-like tubercles on flank, and the arrangement of keeled subcaudal scales. They also differ by uncorrected pairwise sequence divergence of 10.2 and 2.9% for ND2 and 16S, respectively. This work reveals that even the low-elevation coastal hills of southern India have ancient, endemic lineages and require protection. [ABSTRACT FROM AUTHOR]

Aegla is a genus of freshwater anomuran crabs encompassing 94 described species occurring in meridional South America. Brazil harbours the greatest diversity of species, mainly in its southern region, which becomes a priority area for Aegla conservation due to high species richness and phylogenetic diversity, elevated endemism and threats to the Atlantic Forest. Here, we assessed Aegla richness and distribution in this priority area and tested the hypothesis of crypticism in the region's species. Sampling sites were distributed inside and in the surroundings of five protected areas, covering the major distribution range of several species described for southern Brazil. We applied three species delimitation methods to COI mitochondrial gene data, coupled with phylogenetic and morphological analyses. By integrating species delimitation based on the COI data and traditional taxonomy, we uncovered a high proportion of hidden diversity among Aegla in our study area and identified ten known species besides impressive 17 new putative species. Of these, eight are possible new taxonomic units that do not conform to any known species, and nine are divided into three cryptic groups: Aegla jarai complex, Aegla franciscana complex and Aegla camargoi complex. Most of these species have a narrow spatial distribution, making them highly vulnerable to habitat degradation. Despite the real richness of the genus still being largely unknown, the high diversity revealed here makes our study area the richest known region regarding the number of Aegla species within its distribution, making this area even more worthy for conservation efforts. [ABSTRACT FROM AUTHOR]

Integrating different lines of evidence is currently recognized as the most robust approach to investigating taxonomic questions, particularly those concerning cryptic diversity. In recent years, different sources of evidence have pointed to new cryptic taxa for bats, with the genus Hsunycteris being an excellent study group because of its large karyotypic variability and high genetic divergence revealed by the latest taxonomic and systematic reviews. This study tests the cryptic diversity hypothesis for the Hsunycteris thomasi complex through an integrative approach using species delimitation, phylogenetic analysis, chromosome painting, and linear morphometry. Our results suggest the existence of three lineages for H. thomasi that are morphologically indistinguishable, confirming the two previously described lineages in the literature and adding a third. We argue that the paraphyly in H. thomasi, as reported by previous studies, should be treated as independent species since they have unique evolutionary histories. Finally, we demonstrate that chromosomal and molecular methods are indispensable for recognizing and confirming groups that include cryptic species or species with confusing and controversial taxonomy. [ABSTRACT FROM AUTHOR]

As defining various taxonomic ranks, especially at and within a specific level, can often be difficult, we used an evolutionarily young group of Central Asian beetles, the genus Anoplistes, to examine the limits between species, subspecies and ecotype. The molecular data (COI genetic distance, haplotype network and species delimitation) and detailed morphology (using SEM) of taxa assigned to the rank of species, subspecies and ecotype were used to verify their taxonomic status and attempt to more precisely establish the boundaries between these concepts. The minimum threshold for the COI genetic distance between species was found to be approximately 3%, while at the threshold of 4%–5% the morphology left no doubt as to the species distinctiveness. The threshold of approximately 2% was accepted as adequate for a subspecies rank, whereas intraspecific variability among individuals of the same subspecies (including its ecotypes) ranged from 0% to 2%. A newly presented colour/elytral pattern form, possibly another ecotype of A. halodendri distributed in western Mongolia, exemplifies adaptation to different environmental conditions via ecological speciation. Our results provide support that ecotypes can form phylogenetically distinct clades. Based on the results of the haplotype network, it can be tentatively concluded that the sand ecotype was the incipient form from which further ecotypes and subspecies developed. [ABSTRACT FROM AUTHOR]

Two new species of Euathlus (Verhandlungen der Kaiserlich‐Königlichen Zoologisch‐Botanischen Gesellschaft in Wien, 1875, 25, 125) from Argentina are described. Euathlus ameghinoi sp. n. and Euathlus ventus sp. n. are the first records for the Patagonian Steppe. Here we used mitochondrial DNA (cox1) to perform the first molecular phylogeny of some representatives of the genus. In addition, we present the first description of the sexual behaviour of the genus. Both molecular and cladistic morphological analysis showed the genus Euathlus as monophyletic, and new species were recovered as sister groups. New species show new morphological variations of typical characters for the genus (e.g. tibial apophyses and palpal organs). [ABSTRACT FROM AUTHOR]

Conopomorpha sinensis (Lepidoptera: Gracillariidae), commonly known as the litchi fruit borer, is a devastating pest of litchi, leading to substantial economic losses in fruit production. The present study was incepted to supplement updated information on biology, morphometrics, integrative taxonomy, and phylogenetic analysis of C. sinensis. The duration of developmental stages such as egg, larval, pre-pupal, pupal, male and female adult lasts for 3.45 ± 1.13, 11.10 ± 2.52, 2.05 ± 0.51, 5.85 ± 0.88, 5.55 ± 1.00, and 9.00 ± 1.12 days, respectively. The average fecundity was 33.10 ± 6.84 eggs/female. The head capsule width for five larval instars was 0.11 ± 0.01, 0.18 ± 0.02, 0.34 ± 0.01, 0.58 ± 0.04, and 0.64 ± 0.06 mm, respectively. Phylogenetic analysis revealed distinct species-groups formed by C. sinensis with other fruit borer species considered (C. cramerella , C. litchiella Bradley, and Thaumatotibia batrachopa (Meyrick)). Understanding the life cycle of C. sinensis and its correct identification is crucial for targeted pest control strategies. Traditional and molecular taxonomy assist in rapid and accurate species identification and understanding of the evolutionary relationships among Conopomorpha species. [ABSTRACT FROM AUTHOR]

The threatened springsnail subgenus Alzoniella (Navarriella) in the Iberian Peninsula has been suggested to be an old and relict lineage of the family Hydrobiidae. The subgenus is represented by two morphological species, both endemic to the Pyrenees and their southern foothills. We conducted phylogenetic analyses based on mitochondrial and nuclear gene fragments of topotypes and other populations, four molecular species delimitation methods, and morphological examinations to clarify the uncertain systematic position of the subgenus within the family, assess its species diversity, and understand the population genetic structure of the two geographically restricted species. Our phylogenetic results revealed that Alzoniella (Navarriella) is distantly related to all other species of Alzoniella , even belonging to an independent subfamily-level clade, for which we introduce the new genus Navarriella and the new subfamily Navarriellinae subfam. nov. Molecular methods and geometric morphometric analysis of shell shape identified a single species in the new genus. The significant phylogenetic distance from other hydrobiid taxa, narrow distribution, and limited gene flow among its populations (estimated from mitochondrial cytochrome c oxidase subunit I sequences) highlight Navarriella as an isolated lineage within the family that requires urgent conservation attention. Furthermore, our results cast a new light on the northern Iberian Mountains as a dispersal barrier for ancient spring lineages. [ABSTRACT FROM AUTHOR]

Assignation of old type specimens is important for nomenclatural stability, but when it comes to ancient specimens, the use of certain techniques is sometimes not appropriate, due to the condition or age of the specimen. In this study, the supposedly polymorphic and monotypic genus Callirhinus Blanchard was analysed with geometric morphometric techniques and photographs of the pronotum, with the purpose of identifying the locality of the old type specimen (19th century) and to test a priori defined hypothetical species by cumulation of evidence within an integrative taxonomic protocol using geometric morphometry, complemented by morphology and geographical discontinuity. Five morphotypes were defined a priori, and principal component, canonical variates analysis, and distances tests for the assignment of the type specimen based on canonical scores and Procrustes distances between means of groups were carried out. Statistical significance was found in four axes validating the species hypotheses, discovering that the type specimen belongs to the morphotype from Jalisco state. Additionally, a taxonomic treatment, the description of four new species, C. choperi Ramírez-Ponce & Zaragoza sp. nov. , C. nandu Ramírez-Ponce & Zaragoza sp. nov. , C. huiinis Ramírez-Ponce & Zaragoza sp. nov. , and C. veeme Ramírez-Ponce & Zaragoza sp. nov. , keys for the species determination, new distributional records, and a map are provided. The present work demonstrates that Geometric Morphometry is an adequate analytical tool that supports taxonomic identification at low cost and without damaging historical specimens. [ABSTRACT FROM AUTHOR]

Jambu plants (Acmella oleracea) exhibiting necrotic angular leaf spots were collected in Belém—Pará, Brazil. Suspected to be a disease caused by nematodes, the jambu leaves were processed and the presence of nematodes from Aphelenchoides genus was observed using a light microscope. These nematodes were reared on Fusarium sp. and subsequently morphologically and molecularly characterized to species level. Aphelenchoides sp. associated with jambu exhibited morphological and morphometric characteristics similar to those within the A. besseyi complex (A. besseyi sensu stricto, A. oryzae and A. pseudobesseyi). Still, these characteristics were insufficient to confirm the identity of this population. However, the Bayesian inference analysis, utilizing the expansion segment of the large subunit (D2-D3 LSU) of nuclear ribosomal DNA, yielded results with a high posterior probability, indicating that the Aphelenchoides sp. associated with jambu belongs to the A. pseudobesseyi species. Under controlled conditions, the reproduction of the nematode in the leaf tissues (RF > 1) was observed, resulting in disease symptoms. The highest reproductive rate of A. pseudobesseyi (RF = 2.6) was observed from inoculation with 100 nematodes per leaf (500 nematodes per plant). Based on Seinhorst analysis, the tolerance limit in jambu plants infected with A. pseudobesseyi was 250 nematodes. It is concluded that A. pseudobesseyi is the etiological agent of the jambu angular leaf spot. For future evaluation of jambu resistance on A. pseudobesseyi, an inoculate maximum of 100 nematodes per leaf is recommended. [ABSTRACT FROM AUTHOR]

A growing body of evidence indicates that the global diversity of freshwater fishes has not been fully documented. Studies of freshwater fishes that were previously thought to be morphologically variable have revealed the existence of deeply divergent lineages, with many distinct species. In southern Africa a number of Enteromius species exhibit either exceedingly wide or divided distribution patterns that should be rare for freshwater fishes with limited dispersal opportunities between river systems. One such species is the sidespot barb, Enteromius neefi. As currently defined, E. neefi has a disjunct distribution that is divided between rivers in the northeast escarpment in South Africa and Eswatini, and tributaries of the Upper Zambezi in Zambia and southern Congo in the Democratic Republic of Congo, with a large geographic gap between these two populations. With the use of molecular and morphological methods, the level of divergence between the two populations was examined, and a new species was described from the Steelpoort River in the Limpopo River system of South Africa. Findings from this study provide further evidence for a number of taxonomic problems within the goldie barbs of southern Africa, and some taxonomic rearrangements are proposed for this group. [ABSTRACT FROM AUTHOR]

Barathronus is a genus of blind cusk eels comprising 11 valid species. In this paper, we report the second specimen ever documented of Barathronus roulei (Bythitidae) obtained from the Porcupine Bank by R.V. Vizconde de Eza using a bottom trawl at a depth of 1349 m. Morphological description and illustrations, including a radiograph, are provided. In addition, three new sequences corresponding to three different genes, cytochrome c oxidase subunit I (COI)‐DNA barcoding, 16S ribosomal RNA (16S), and recombination activating protein 1 (RAG1), have been added to the molecular repositories, representing the first sequences for the species. [ABSTRACT FROM AUTHOR]

The genus Urotrygon comprises small‐ to medium‐sized endemic round rays on the American continent and has undergone several synonymization processes. Here, we used an integrative taxonomic approach, including meristic, morphometric, and mtDNA analyses, to resolve the particularly intricate relationship among Urotrygon munda Gill, 1863, Urotrygon chilensis (Günther, 1872), and Urotrygon asterias (Jordan & Gilbert, 1883). The latter species is currently a synonym of U. munda but is also considered the U. chilensis "northern morphotype." These taxonomic entities have historically been confounded, mainly due to their phenotypical resemblance along their geographic distribution in the eastern Pacific. We assessed 78 specimens (43 "northern" and 30 "southern morphotypes" of U. chilensis, as well as 5 U. munda) using 19 external variables for taxonomic and morphometric analysis. Distinct meristic patterns, including pectoral and pelvic ceratotrichia, vertebrae number, and thorn distribution along the dorsal midline, were observed in the series‐type specimens of the three taxonomic entities. Our multivariate morphometric analyses consistently differentiated the three groups as distinct taxonomic entities, with an overall classification accuracy of 66.7%. The meristic results also provided reliable information distinguishing the three entities. Based on the nicotinamide adenine dinucleotide (NADH2) and cytochrome oxidase subunit I (COI) genes, our phylogenetic analysis were consistent with the morphometric and meristic data, supporting these three entities as distinct species having their own evolutionary lineages. Our comprehensive approach confidently demonstrated that the northern U. chilensis morphotype matched and corresponded to the description of the Starry round ray, U. asterias, confirming its taxonomic resurrection as a valid species distinct from U. chilensis and U. munda. The geographic distribution of U. asterias spans from the tropical west coast of Mexico (including the Gulf of California) to Costa Rica, revealing that microevolutionary processes have well‐defined population clades within this range. Furthermore, U. chilensis is unequivocally established as the sole Urotrygon species occurring south of the Guayaquil marine ecoregion. In addition, the public COI and NADH2 sequences available for Urotrygon hosted in the ad hoc online databases were found to be misidentified, emphasizing the need for rigorous taxonomic scrutiny in this group. Finally, our research underscores the significance of an integrative approach that combines morphometric, meristic, and molecular techniques with historical data to disentangle the complexities of closely related taxa. [ABSTRACT FROM AUTHOR]

The phylogenetic relationships among major lineages of the globally distributed leafhopper subfamily Coelidiinae were reconstructed by analysis of 2903 nucleotide positions from two mitochondrial genes (COI and 16S), four nuclear genes (28S, H3, H2A and Wingless) and 102 discrete morphological characters, compiled for 86 species representing 52 genera within 9 coelidiine tribes broadly representative of the world fauna in addition to 12 outgroup taxa. Maximum likelihood and Bayesian analyses yielded well‐resolved phylogenetic estimates that were highly congruent with most branches receiving strong support. The results indicate Coelidiinae sensu stricto (=Coelidiinae sensu lato without Equeefini and Macroceratogoniini), Thagriini, Tharrini, Tinobregmini and Equeefini are monophyletic. However, the two largest tribes, Coelidiini and Teruliini, are paraphyletic, as well as Youngolidiini and most genera of Oriental Coelidiini. Fossil‐calibrated molecular divergence time analysis indicates that the Coelidiinae sensu stricto originated ca. 149 Ma, prior to the complete separation of the Gondwanan continents, and the tribe‐level lineages diverged between the Lower and Upper Cretaceous (92.77–138.03 Ma). The major lineages of Coelidiinae arose in the Oriental and Neotropical regions, and Oriental Coelidiini arose as a result of dispersal and colonisation from the Afrotropical region. [ABSTRACT FROM AUTHOR]

Xanthium is a genus of annual herbaceous plants that stands out within Asteraceae for being wind‐pollinated, diclinous monoecious, and bearing solitary pistillate flowers in peculiar spiny structures (burs). Xanthium sect. Acanthoxanthium is native to South America and characterized by the presence of trifurcate spines at the base of the leaves. Past taxonomic treatments of the section have been contradictory, some recognising up to six species, others reducing all to a single polymorphic species. Altogether, 42 samples of X. sect. Acanthoxanthium were analysed, the vast majority taken from herbarium specimens between 20 and 160 years old. We sampled multiple specimens of X. spinosum from throughout its broad range as well as those taxa with narrower distributions, covering the whole range of morphological variation in the section. When possible, we included types and original material. We used Hyb‐Seq techniques to obtain information from about 1000 single‐copy nuclear genes and complete plastomes. Phylogenomic data were submitted to coalescent‐based species delimitation approaches (SPEEDEMON). Additionally, we performed geometric morphometric analysis of leaf outlines. The results strongly support the identification of four lineages in the section favouring the acceptance of four of the hitherto described species, i.e., X. ambrosioides, X. argenteum, X. catharticum, and X. spinosum. These results were to some extent corroborated by morphometric analyses. While X. ambrosioides was well distinct from X. spinosum based on leaf morphology, such difference was not observed between X. spinosum and X. catharticum. However, X. catharticum differs from X. spinosum in its ecological requirements, being a species rather adapted to high‐mountain environments of the Neotropics. Intriguingly, X. argenteum – a taxon described from a single herbarium collection – was also inferred as a species. [ABSTRACT FROM AUTHOR]

Recent collection efforts along the Brazilian coast revealed a Haliclona species preliminarily identified as a likely new species. However, sequencing of the 28S rRNA C-Region, a barcode marker in sponges, showed its high genetic similarity with a Haliclona sp. from Hawaiʻi (GenBank MW016137–MW016139). We applied an integrated morphological and molecular assessment, which allowed us to identify both Brazilian and Hawaiian specimens as H. (Reniera) laubenfelsi, a species with an Indo-Pacific distribution. We postulate this species to be exotic both in the Brazilian coast and in Hawaiʻi. Our evidence is based on the arrival of the species in Brazil after 2001, being first registered next to an international port. In turn, the species is distributed discontinuously in Hawaiʻi, being mainly restricted to sheltered bays and vicinities of ports, showing a predilection for anthropogenic substrates, which strengthen the hypothesis of its exotic origin. Recent collections in Hawaiʻi (2016–2018) failed to find this species in natural habitats, though it was an abundant pioneer species in Autonomous Reef Monitoring Structures. Its capacity to colonize artificial substrata may indicate either a cryptobenthic nature or an invasive potential. We highlight the need of monitoring its abundance, spatial distribution, and biotic interactions along the Brazilian coast to assess its potential environmental impacts. The full morphological description, and the molecular sequences we provided certainly will speed up the identification of this species, allowing to track its range extension. [ABSTRACT FROM AUTHOR]

Copyright of R.A.R.E - Association Roussillonnaise d'Entomologie is the property of Association Roussillonnaise d Entomologie and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Abstract The subfamily Seirinae (Collembola: Entomobryidae) is among the most diverse suprageneric taxa of epedaphic springtails and is particularly abundant and species-rich in tropical and subtropical regions. Numerous studies have investigated its internal and external phylogenetic relationships, enhancing our understanding on Seirinae systematics. Recent taxonomic efforts have also advanced our knowledge on the subfamily morphology and diversity. In this study, we reevaluate the phylogeny of Seirinae using the mitogenomes of 26 samples from different continents, aiming to discuss recent findings regarding the group systematics, to identify cases of alien species introduced in China and Thailand, and propose new synonyms for Seira spp. Additionally, we describe a new species from Thailand and provide a redescription of Seira brasiliana (Arlé) based on the study of Brazilian and Chinese specimens. Through these efforts, we provide further ground for understanding the evolution, systematics, distribution and taxonomy of the group, contributing to future studies on Seirinae and Entomobryidae.

Abstract The Pleidae, or pygmy backswimmers, is a family of aquatic bugs (Hemiptera, Heteroptera, Nepomorpha) containing four genera. Here, we describe Plea cryptica sp. nov. and redescribe its sister species, Plea minutissima Leach, 1817. Whereas the morphological distinction of these closely related species is only possible for males, molecular data clearly separate them. As part of our taxonomic study, we provide comprehensive molecular data including more than 200 DNA barcodes from all over Europe, complete nuclear ribosomal DNA, full mitochondrial genome data, and 3D scans for both species. Furthermore, the same molecular markers are also presented for Neoplea striola (Fieber, 1844). We used Maximum Likelihood (ML) analyses to reconstruct the phylogeny of the Pleidae and Notonectoidea based on available mitogenomic data. Our study represents a successful implementation of the proposed concept of taxonomics, using data from high-throughput sequencing technologies for integrative taxonomic studies, and allowing high confidence for both biodiversity and ecological research.

Abstract The Monticola series comprises two anthropophilic and widely distributed species in Brazil: Pintomyia (Pifanomyia) monticola (Costa Lima, 1932) and Pintomyia (Pifanomyia) misionensis (Castro, 1959). They mainly occur in the Atlantic Rainforest, and it is known that Pi. monticola comprises at least two well-structured genetic lineages regarding a fragment of the cytochrome c oxidase subunit I (COI) gene. Here, we aim to elucidate the taxonomic status of this group using integrative taxonomy tools. Collections were performed in nine localities of four Brazilian states, and COI fragments were sequenced and merged with publicly available data. Several single-locus species delimitation algorithms, genetic distance metrics, phylogenetic trees, and haplotype networks were used to uncover cryptic diversity and population structure within Pi. monticola and Pi. misionensis. The resulting genetic clusters were then tested for morphological differences through linear and geometric morphometry of several characters. We analyzed 152 COI sequences, comprising 48 haplotypes. The maximum intraspecific p distances were 8.21% (mean 4.17%) and 9.12% (mean 4.4%) for Pi. monticola and Pi. misionensis, respectively, while interspecific ones ranged from 10.94 to 14.09% (mean 12.33%). Phylogenetic gene trees showed well-supported clades for both species, with clear structuring patterns within them. Species-delimitation algorithms split our dataset into at least three putative species for each taxon. Moreover, population structure analysis showed a strong correlation between Atlantic Forest areas of endemism as sources of molecular variation in Pi. monticola. Morphometric analyses were significant for wing shape variation and some linear measurements (mainly of the head) when comparing specimens of different genetic clusters for both taxa. These results indicate strong genetic structuring of Monticola series species, confirmed by morphometry, indicating two possible cryptic species complexes.

The genus Neocaridina, originating from East Asia and representing a small-size landlocked shrimp group of the family Atyidae, is an important group of ornamental shrimps and plays significant ecological roles in their natural habitats. Owing to the considerable variability of the taxonomic characters it employed, Neocaridina is constantly under revision, and the validation of several species is currently questionable. In the present study, several Neocaridina shrimps were collected from the Baiyangdian drainage area. Through morphological examination, they exhibited delicately diagnostical differences in the dactyli of the third pereiopod and the endopod of the first and second pleopod and were classified into morph A, morph B and morph C. According to the literature description, morph A and morph C were identified as N. denticulata denticulata and N. denticulata sinensis, respectively. Among them, morph B presents an intermediate state between morph A and morph C. Subsequently, we determined the mitogenomes of morph A, morph B and morph C. Based on the morphological characteristics, genetic variation and phylogenetic tree, we contend that N. davidi, N. d. denticulata, N. d. sinensis and N. heteropoda should belong to the same species, and we propose retaining the name N. denticulata. The reconstructed mitogenomic phylogeny indicated that the monophyly of several genera within Atyidae has been challenged, suggesting that the established classification of Atyidae requires substantial taxonomic revision at all taxonomic levels. Furthermore, the tree’s topologies supported Atyidae at a deeper base within Caridea. More comprehensive taxon sampling is still needed to resolve the explicit internal relationships among Caridea.

Abstract Fishes from the genus Carasobarbus, widely distributed throughout the river systems of North Africa and West Asia, are commonly referred to as Himris. In the Persian Gulf basin, they are widespread and are also found in fast-flowing rivers or the deeper regions of lakes. In this region, representation of these fishes in scientific collections is scarce, and except for C. luteus, the other species are very poorly documented and frequently misidentified due to their similarities. In this study we analysed the relationships among Carasobarbus species using mitochondrial genes (Cyt b, COI) and present morphological characters based on examinations. Our results revealed three new species which we describe here. Carasobarbus doadrioi, new species, is distinguished by 40–44 scales on the lateral line and a prominent black blotch on end of caudal peduncle in specimens

Abstract Marine and coastal ecosystems respond to climate change in various ways, such as the type of ecosystem, the species composition, interactions, and distribution, and the effect of local stressors. Metazoan organisms, particularly zooplankton, are important indicators for monitoring the effects climate-driven warming in marine coastal ecosystems over the long term. In this study, the diversity and distribution of zooplankton communities in the Mediterranean Sea (Canyon Dohrn and LTER-MareChiara, Gulf of Naples), a known biodiversity and climate changes hotspot, have been assessed using the integration of morphological-based identification and organismal eDNA. Our findings showed that the multi-locus strategy including the mitochondrial cytochrome c oxidase I (COI) gene and the hypervariable region V9 of the 18S rDNA (18S V9) as targets, improved the taxonomic overview, with the COI gene being more effective than the 18S V9 region for metazoans at the species level. However, appendicularians were detected only with the 18S V9 region. Overall, organismal eDNA is a powerful approach for revealing hidden biodiversity, especially for gelatinous and meroplankton components, and provided new insights into biodiversity patterns. The ecological importance of calanoid copepods in coastal ecosystems has been confirmed. In contrast, the discovery of 13 new metazoan records in the Mediterranean Sea, including two non-indigenous copepod species, suggested that local stressors affect zooplankton community structure and resilience, highlighting the importance of biomonitoring and protecting marine coastal ecosystems.