1,094 results on '"INFLUENZA research"'
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2. Research Data from Nanjing Agricultural University Update Understanding of Influenza C Virus (structural and Functional Analysis of the Roles of Influenza C Virus Membrane Proteins In Assembly and Budding)
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Influenza research ,Membrane proteins -- Identification and classification -- Health aspects ,Health - Abstract
2022 JUN 4 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Current study results on Influenza C Virus have been published. According to [...]
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- 2022
3. Reports from Northeast Forestry University Advance Knowledge in Avian Influenza (Bird Flu) (The Variation of Duck RIG-I-Mediated Innate Immune Response Induced by Different Virulence Avian Influenza Viruses)
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Virulence (Microbiology) -- Research ,Avian influenza viruses -- Complications and side effects -- Genetic aspects -- Prevention ,Immune response ,Influenza research ,Health - Abstract
2022 MAR 19 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Investigators publish new report on avian influenza (bird flu). According to news [...]
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- 2022
4. Kyoto University Researchers Broaden Understanding of Influenza A Virus (Migration of Influenza Virus Nucleoprotein into the Nucleolus Is Essential for Ribonucleoprotein Complex Formation)
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Influenza viruses -- Development and progression -- Genetic aspects ,Carrier proteins -- Health aspects ,Influenza research ,Health ,Kyoto University -- Research - Abstract
2022 MAR 12 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Researchers detail new data in influenza A virus. According to news reporting [...]
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- 2022
5. New Influenza Study Results Reported from University of Vermont (Protein Disulfide Isomerase A3 Regulates Influenza Neuraminidase Activity and Influenza Burden in the Lung)
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Influenza research ,Protein disulfide isomerases -- Research -- Health aspects ,Health - Abstract
2022 MAR 5 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Researchers detail new data in influenza. According to news originating from the [...]
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- 2022
6. IS UNIVERSAL FLU VACCINE IN THE OFFING?
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Routh, Jennifer
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United States. National Institutes of Health ,United States. National Institute of Allergy and Infectious Diseases ,Influenza vaccines ,Communicable diseases ,Public health ,Influenza ,Vaccines ,Medical schools ,Technical institutes ,Scientists ,Influenza research ,Allergy ,Workshops (Educational programs) ,General interest ,News, opinion and commentary - Abstract
'... A key public health goal is to develop a universal influenza vaccine that would protect against most or all seasonal strains of influenza virus and potential pandemic strains.' SCIENTISTS [...]
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- 2019
7. Viral detection profile in children with severe acute respiratory infection
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Luciana Nascimento Pinto Canela, Maria Clara de Magalhaes-Barbosa, Carlos Eduardo Raymundo, Sharon Carney, Marilda Mendonca Siqueira, Arnaldo Prata-Barbosa, Antonio Jose Ledo Alves da Cunha
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- 2018
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8. The influenza season 2016/17 in Bucharest, Romania--surveillance data and clinical characteristics of patients with influenza-like illness admitted to a tertiary infectious diseases hospital
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Draganescu, Anca, Sandulescu, Oana, Florea, Dragos, Vlaicu, Ovidiu, Streinu-Cercel, Anca, Otelea, Dan, Arama, Victoria, Luminos, Monica Luminita, Streinu-Cercel, Adrian, Nitescu, Maria, Ivanciuc, Alina, Bacruban, Rodica, and Pitigoi, Daniela
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- 2018
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9. Influenza-specific lung-resident memory T cells are proliferative and polyfunctional and maintain diverse TCR profiles
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Pizzolla, Angela, Nguyen, Thi H.O., Jaffar, Sneha SanJade, Loudovaris, Tom, Mannering, Stuart I., Thomas, Paul G., Westall, Glen P., Kedzierska, Katherine, and Wakim, Linda M.
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Influenza research ,T cell antigen receptors -- Health aspects -- Research ,Health care industry - Abstract
The human lung harbors a large population of resident memory T cells (Trm cells). These cells are perfectly positioned to mediate rapid protection against respiratory pathogens such as influenza virus, a highly contagious respiratory pathogen that continues to be a major public health burden. Animal models show that influenza-specific lung [CD8.sup.+] Trm cells are indispensable for crossprotection against pulmonary infection with different influenza virus strains. However, it is not known whether influenza-specific [CD8.sup.+] Trm cells present within the human lung have the same critical role in modulating the course of the disease. Here, we showed that human lung contains a population of [CD8.sup.+] Trm cells that are highly proliferative and have polyfunctional progeny. We observed that different influenza virus-specific [CD8.sup.+] T cell specificities differentiated into Trm cells with varying efficiencies and that the size of the influenza-specific [CD8.sup.+] T cell population persisting in the lung directly correlated with the efficiency of differentiation into Trm cells. To our knowledge, we provide the first ex vivo dissection of paired T cell receptor (TCR) repertoires of human influenza-specific [CD8.sup.+] Trm cells. Our data reveal diverse TCR profiles within the human lung Trm cells and a high degree of clonal sharing with other [CD8.sup.+] T cell populations, a feature important for effective T cell function and protection against the generation of viral-escape mutants., Introduction Influenza A viruses cause substantial morbidity and mortality worldwide. Vaccination is considered to be the best way to prevent human influenza disease. Current antibody-based vaccines are highly effective in [...]
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- 2018
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10. New Findings from First Affiliated Hospital of Guangzhou Medical University in the Area of Influenza A Virus Published (Generation of a pdmH1N1 2018 Influenza A Reporter Virus Carrying a mCherry Fluorescent Protein in the PA Segment)
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Influenza research ,Fluorescent proteins -- Identification and classification -- Health aspects ,Viral proteins -- Identification and classification -- Health aspects ,Health - Abstract
2022 FEB 12 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Investigators publish new report on influenza A virus. According to news originating [...]
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- 2022
11. The Provision Of Influenza Research Services, Sovid-19, Pneumonia, Severe Acute Respiratory Syndrome, As Well As The Flu Caused By The New Virus Subtype
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Influenza ,Influenza research ,Severe acute respiratory syndrome ,Medical laboratories ,Business, international - Abstract
Tenders are invited for the provision of influenza research services, sovid-19, pneumonia, severe acute respiratory syndrome, as well as the flu caused by the new virus subtype Services of medical [...]
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- 2023
12. Capturing a Killer Flu VIRUS.
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Taubenberger, Jeffery K., Reid, Ann H., Fanning, Thomas G., J.T., A.R., and T.F.
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INFLUENZA research , *INFLUENZA viruses , *VIRUS diseases , *COMMUNICABLE diseases , *VIRUSES , *RESPIRATORY infections , *DISEASES in military personnel , *WORLD War I , *WORLD health , *HISTORY - Abstract
The article researches the influenza pandemic of 1918. On September 7, 1918, at the height of World War I, a soldier at an army training camp outside Boston, Massachusetts, came to sick call with a high fever. Incredibly, by September 23rd, 12,604 cases had been reported in the camp of 45,000 soldiers. This particularly virulent and infectious strain of the influenza virus is thought to have killed as many as 40 million people around the world between 1918 and 1919. This most lethal influenza outbreak in modern history disappeared almost as quickly as it emerged, and its cause was long believed lost to time. Thanks to incredible foresight by the U.S. Army Medical Museum, a pathologist named Johan Hultin, and advances in genetic analysis of old tissue samples, we have been able to retrieve parts of the 1918 virus and study their features. Our two principal goals are determining what made the 1918 influenza so virulent, to guide development of influenza treatments and preventive measures, and establishing the origin of the pandemic virus, to better target possible sources of future pandemic strains. Whenever a new influenza strain emerges with features that have never been encountered by most people's immune systems, widespread influenza outbreaks are likely. INSETS: Overview/The Mystery of 1918;REVERSE ENGINEERING THE FLU;Persistence Pays Off.
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- 2005
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13. Breathing space.
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Martindale, Diane
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INFLUENZA research , *EPIDEMIC research - Abstract
Focuses on research on a flu epidemic that occurred in Hong Kong, China in 1997. Infection through a pure bird strain; Key mutations found in the flu virus that caused the epidemic; Analysis of strains that caused other such outbreaks.
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- 2002
14. HOT ZONES & FLU HOTELS: Last year's flu season was brutal, partly because flu shots worked only one out of every three times. Now, with researchers racing to develop new vaccines, we've gotta ask: Why are flu shots so lousy? And should you even bother getting one?
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Lenzer, Jeanne
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United States. Centers for Disease Control and Prevention -- Reports ,Influenza vaccines -- Health aspects -- Research ,Influenza research ,Influenza -- Patient outcomes ,Public health ,Health ,Saint Louis University -- Research - Abstract
Most hotels charge you to stay, but Hotel Influenza will not be like most hotels. Guests at this newly renovated, soon-to-open facility in St. Louis will check in for about [...]
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- 2018
15. A 19-year old man with IgA vasculitis after vaccination
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Malek, Alexandre, Gomez-Villegas, Sara Isabel, de la Hoz, Alejandro, Nowbakht, Cima, and Arias, Cesar A.
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- 2018
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16. HOW TO STOP A LETHAL VIRUS: With tens of millions of lives at stake, medical researchers are racing to create a revolutionary flu vaccine before the next devastating epidemic
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Mgkenna, Maryn
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Influenza research ,Influenza vaccines -- Research ,Epidemics -- Prevention -- United States ,History - Abstract
IN THE LAST WEEK OF MARCH IN 2009, TWO CHILDREN IN Southern California came down with the flu. They were 9 and 10 years old, a girl and a boy, [...]
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- 2017
17. Proteomics in Influenza Research: The Emerging Role of Posttranslational Modifications
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Ning Liu, Weizheng Zhao, Jinming Zhang, Jing-Bo Yang, Wanchun Sun, and Qisheng Peng
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Proteomics ,0301 basic medicine ,Proteome ,030102 biochemistry & molecular biology ,Treatment method ,Acetylation ,Influenza a ,General Chemistry ,Computational biology ,Biology ,Influenza research ,Biochemistry ,Mass Spectrometry ,03 medical and health sciences ,030104 developmental biology ,Influenza, Human ,Humans ,Post-translational regulation ,Phosphorylation ,Protein Processing, Post-Translational - Abstract
Influenza viruses continue evolving and have the ability to cause a global pandemic, so it is very important to elucidate its pathogenesis and find new treatment methods. In recent years, proteomics has made important contributions to describing the dynamic interaction between influenza viruses and their hosts, especially in posttranslational regulation of a variety of key biological processes. Protein posttranslational modifications (PTMs) increase the diversity of functionality of the organismal proteome and affect almost all aspects of pathogen biology, primarily by regulating the structure, function, and localization of the modified proteins. Considerable technical achievements in mass spectrometry-based proteomics have been made in a large number of proteome-wide surveys of PTMs in many different organisms. Herein we specifically focus on the proteomic studies regarding a variety of PTMs that occur in both the influenza viruses, mainly influenza A viruses (IAVs), and their hosts, including phosphorylation, ubiquitination and ubiquitin-like modification, glycosylation, methylation, acetylation, and some types of acylation. Integration of these data sets provides a unique scenery of the global regulation and interplay of different PTMs during the interaction between IAVs and their hosts. Various techniques used to globally profiling these PTMs, mostly MS-based approaches, are discussed regarding their increasing roles in mechanical regulation of interaction between influenza viruses and their hosts.
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- 2020
18. The Pathway to a Universal Influenza Vaccine.
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Paules, Catharine I., Marston, Hilary D., Eisinger, Robert W., Baltimore, David, and Fauci, Anthony S.
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INFLUENZA research , *INFLUENZA vaccines , *VACCINE manufacturing - Abstract
Summary Development of a universal influenza vaccine is a research priority for the National Institute of Allergy and Infectious Diseases (NIAID) at the National Institutes of Health. To facilitate this goal, we convened a workshop in Rockville, Maryland to identify knowledge gaps in influenza research and develop strategies to fill them. [ABSTRACT FROM AUTHOR]
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- 2017
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19. CONSISE statement on the reporting of Seroepidemiologic Studies for influenza ( ROSES-I statement): an extension of the STROBE statement.
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Horby, Peter W., Laurie, Karen L., Cowling, Benjamin J., Engelhardt, Othmar G., Sturm‐Ramirez, Katharine, Sanchez, Jose L., Katz, Jacqueline M., Uyeki, Timothy M., Wood, John, and Van Kerkhove, Maria D.
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INFLUENZA research , *EPIDEMIOLOGY , *SEROLOGY , *GUIDELINES , *MIDDLE East respiratory syndrome - Abstract
Background Population-based serologic studies are a vital tool for understanding the epidemiology of influenza and other respiratory viruses, including the early assessment of the transmissibility and severity of the 2009 influenza pandemic, and Middle East respiratory syndrome coronavirus. However, interpretation of the results of serologic studies has been hampered by the diversity of approaches and the lack of standardized methods and reporting. Objective The objective of the CONSISE ROSES -I statement was to improve the quality and transparency of reporting of influenza seroepidemiologic studies and facilitate the assessment of the validity and generalizability of published results. Methods The ROSES-I statement was developed as an expert consensus of the CONSISE epidemiology and laboratory working groups. The recommendations are presented in the familiar format of a reporting guideline. Because seroepidemiologic studies are a specific type of observational epidemiology study, the ROSES-I statement is built upon the STROBE guidelines. As such, the ROSES-I statement should be seen as an extension of the STROBE guidelines. Results The ROSES -I statement presents 42 items that can be used as a checklist of the information that should be included in the results of published seroepidemiologic studies, and which can also serve as a guide to the items that need to be considered during study design and implementation. Conclusions We hope that the ROSES-I statement will contribute to improving the quality of reporting of seroepidemiologic studies. [ABSTRACT FROM AUTHOR]
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- 2017
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20. Hospital surveillance of influenza strains: a concordant image of viruses identified by the Swiss Sentinel system?
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Gonçalves, Ana Rita, Iten, Anne, Suter‐Boquete, Patricia, Schibler, Manuel, Kaiser, Laurent, and Cordey, Samuel
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INFLUENZA research , *INFLUENZA viruses , *INFLUENZA A virus, H1N1 subtype , *HEALTH surveys , *OUTPATIENT medical care - Abstract
Background The Swiss Sentinel system for influenza virus surveillance reports influenza-like illness in the community through a network of primary care practitioners, but the epidemiologic, demographic, and virological characterization may differ from that observed in hospitalized patients with influenza. Objective To compare demographic and virological data from hospital influenza cases with Sentinel system data during the 2014-2015 season. Methods We included 2623 in- and outpatients with a screening request for influenza A/B in a university teaching hospital in Geneva, Switzerland, and 933 participants from the Swiss Sentinel surveillance system and compared the demographic and virological data of the two populations, including the respective distribution of influenza subtypes, and conducted a phylogenetic comparison at the HA1 level of influenza viruses recovered in community and hospital cases. Results There were similar proportions of influenza strains recovered in the hospital and in the community (H3N2, 57.1% and 56.9%; H1N1pdm09, 15.5% and 14.2%; B, 27.4% and 28.8%, respectively). HA1 sequence analysis confirmed that all three strains were genetically similar between the two populations. During this particular season, influenza cases were detected earlier in the hospital than in the Sentinel system. Conclusions Although an influenza surveillance system based on the community can predict the type of influenza strains that will be associated with hospitalizations, it fails to estimate the potential virulence of circulating strains. Further, the population characteristics in the community differ from those in hospitalized patients. This suggests that any national influenza surveillance system should include both community- and hospital-based surveys. [ABSTRACT FROM AUTHOR]
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- 2017
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21. National Influenza Surveillance in the Philippines from 2006 to 2012: seasonality and circulating strains.
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Lucero, Marilla G., Inobaya, Marianette T., Nillos, Leilani T., Tan, Alvin G., Arguelles, Vina Lea F., Dureza, Christine Joy C., Mercado, Edelwisa S., Bautista, Analisa N., Tallo, Veronica L., Barrientos, Agnes V., Rodriguez, Tomas, and Olveda, Remigio M.
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INFLUENZA research , *PUBLIC health surveillance , *PUBLIC health , *EPIDEMICS - Abstract
Background: The results of routine influenza surveillance in 13 regions in the Philippines from 2006 to 2012 are presented, describing the annual seasonal epidemics of confirmed influenza virus infection, seasonal and alert thresholds, epidemic curve, and circulating influenza strains. Methods: Retrospective analysis of Philippine influenza surveillance data from 2006 to 2012 was conducted to determine seasonality with the use of weekly influenza positivity rates and calculating epidemic curves and seasonal and alert thresholds using the World Health Organization (WHO) global epidemiological surveillance standards for influenza. Results: Increased weekly influenza positive rates were observed from June to November, coinciding with the rainy season and school opening. Two or more peaks of influenza activity were observed with different dominant influenza types associated with each peak. A-H1N1, A-H3N2, and two types of B viruses circulated during the influenza season in varying proportions every year. Increased influenza activity for 2012 occurred 8 weeks late in week 29, rather than the expected week of rise of cases in week 21 as depicted in the established average epidemic curve and seasonal threshold. The intensity was severe going above the alert threshold but of short duration. Southern Hemisphere vaccine strains matched circulating influenza virus for more surveillance years than Northern Hemisphere vaccine strains. Conclusions: Influenza seasonality in the Philippines is from June to November. The ideal time to administer Southern Hemisphere influenza vaccine should be from April to May. With two lineages of influenza B circulating annually, quadrivalent vaccine might have more impact on influenza control than trivalent vaccine. Establishment of thresholds and average epidemic curve provide a tool for policy-makers to assess the intensity or severity of the current influenza epidemic even early in its course, to help plan more precisely resources necessary to control the outbreak. Influenza surveillance activities should be continued in the Philippines and funding for such activities should already be incorporated into the Philippine health budget. [ABSTRACT FROM AUTHOR]
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- 2016
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22. The future of influenza forecasts.
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Viboud, Cécile and Vespignani, Alessandro
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INFLUENZA diagnosis , *MEDICAL forecasting , *INFLUENZA research , *MEDICAL innovations , *PREVENTION of communicable diseases , *DEMOGRAPHIC databases , *POPULATION - Abstract
The author comments on influenza forecasts. Topics discussed include information on the generating real-time epidemic forecasts to help control infectious diseases; use of machine learning and sophisticated statistical approaches in influenza research; and benefits of mechanistic transmission models from computational advances and extensive data on the mobility and sociodemographic structure of human populations.
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- 2019
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23. Influenza Virus in Community-Acquired Pneumonia: Current Understanding and Knowledge Gaps
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Bin Cao, Fei Zhou, Hui Li, Jiuyang Xu, Jiapei Yu, and Luning Yang
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Pulmonary and Respiratory Medicine ,Health Knowledge, Attitudes, Practice ,Pneumonia, Viral ,030204 cardiovascular system & hematology ,Critical Care and Intensive Care Medicine ,Antiviral Agents ,Virus ,Disease Outbreaks ,Diagnosis, Differential ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Community-acquired pneumonia ,Immunopathology ,Influenza, Human ,Global health ,Humans ,Medicine ,Clinical Trials as Topic ,Coinfection ,business.industry ,medicine.disease ,Influenza research ,Review article ,Community-Acquired Infections ,030228 respiratory system ,Influenza A virus ,Influenza Vaccines ,Immunology ,business - Abstract
Influenza virus infection poses a heavy burden on global health and economics. With the advancement in viral pathogen detection methods, the role of virus infection in community-acquired pneumonia has been increasingly recognized. The disease spectrum of influenza ranges from asymptomatic infection to severe or even fatal illness. Progress has been made in recent years to identify risk factors including lymphopenia and hypoxia for influenza mortality. Immunopathology plays an important role in influenza pathogenesis. The disturbed homeostasis after virus infection consists of both an excessive inflammatory phase and an immune suppression phase, collectively described as viral sepsis. Multiple antiviral therapies have been tested and some were advanced to late-phase clinical trials, including polymerase inhibitors, hemagglutinin inhibitors, host-acting antivirals, monoclonal antibodies, and adjunctive immunomodulatory therapies. Combination therapies have been shown to increase antiviral efficacy and genetic resistance barrier. In this review, we summarized the recent advances in our understanding of the disease pathogenesis, as well as the progress in antiviral therapy development. We also pointed out current key knowledge gaps in influenza research. Hopefully, experience gained from seasonal influenza research will prepare us for the next influenza pandemic and emerging respiratory pathogens.
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- 2020
24. SARS-CoV-2 infections in mRNA vaccinated individuals are biased for viruses encoding spike E484K and associated with reduced infectious virus loads that correlate with respiratory antiviral IgG levels
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Nicholas Gallagher, Adannaya Amadi, Andrew Pekosz, Chun Huai Luo, Maggie Li, Nicholas J Swanson, Heba H. Mostafa, and C. Paul Morris
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COVID-19 Vaccines ,Respiratory System ,Antibodies, Viral ,Asymptomatic ,Antiviral Agents ,Virus ,Article ,Virology ,medicine ,Humans ,RNA, Messenger ,BNT162 Vaccine ,Cytopathic effect ,biology ,business.industry ,SARS-CoV-2 ,Vaccination ,COVID-19 ,Influenza research ,Infectious Diseases ,Immunization ,Immunoglobulin G ,biology.protein ,Antibody ,medicine.symptom ,business ,Viral load - Abstract
IntroductionCOVID-19 large scale immunization in the US has been associated with infrequent breakthrough positive molecular testing. Whether a positive test is associated with a high viral RNA load, specific viral variant, recovery of infectious virus, or symptomatic infection is largely not known.MethodsIn this study, we identified 133 SARS-CoV-2 positive patients who had received two doses of either Pfizer-BioNTech (BNT162b2) or Moderna (mRNA-1273) vaccines, the 2nd of which was received between January and April of 2021. The positive samples were collected between January and May of 2021 with a time that extended from 2 to 100 days after the second dose. Samples were sequenced to characterize the whole genome and Spike protein changes and cycle thresholds that reflect viral loads were determined using a single molecular assay. Local SARS-CoV-2 IgG antibodies were examined using ELISA and specimens were grown on cell culture to assess the recovery of infectious virus as compared to a control unvaccinated cohort from a matched time frame.ResultsOf 133 specimens, 24 failed sequencing and yielded a negative or very low viral load on the repeat PCR. Of 109 specimens that were used for further genome analysis, 68 (62.4%) were from symptomatic infections, 11 (10.1%) were admitted for COVID-19, and 2 (1.8%) required ICU admission with no associated mortality. The predominant virus variant was the alpha (B.1.1.7), however a significant association between lineage B.1.526 and amino acid change S: E484K with positives after vaccination was noted when genomes were compared to a large control cohort from a matched time frame. A significant reduction of the recovery of infectious virus on cell culture as well as delayed time to the first appearance of cytopathic effect was accompanied by an increase in local IgG levels in respiratory samples of vaccinated individuals but upper respiratory tract IgG levels were not different between symptomatic or asymptomatic infections.ConclusionsVaccination reduces the recovery of infectious virus in breakthrough infections accompanied by an increase in upper respiratory tract local immune responses.FundingNational Institute of Health (The Johns Hopkins Center of Excellence in Influenza Research and Surveillance, HHSN272201400007C), Johns Hopkins University, Maryland Department of Health, Centers for Disease Control and Prevention.
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- 2021
25. Evidence for retained spike-binding and neutralizing activity against emerging SARS-CoV-2 variants in serum of COVID-19 mRNA vaccine recipients
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Viviana Simon, Florian Krammer, Komal Srivastava, Hala Alshammary, Ana S. Gonzalez-Reiche, D. Noah Sather, Angela Amoako, Gagandeep Singh, Fatima Amanat, Juan Manuel Carreño, Emilia Mia Sordillo, Ariel Raskin, Adriana van de Guchte, and Harm van Bakel
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Medicine (General) ,Research paper ,COVID-19 Vaccines ,Influenza vaccine ,Neutralization activity ,VoC ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Neutralization ,Antibodies ,Serology ,Antigen-Antibody Reactions ,R5-920 ,Protein Domains ,Neutralization Tests ,Humans ,COVID-19 mRNA vaccines ,Neutralizing antibody ,Phylogeny ,SARS-CoV-2 variants ,Vaccines, Synthetic ,SARS-CoV-2 ,Ligand binding assay ,COVID-19 ,General Medicine ,Influenza research ,Virology ,Antibodies, Neutralizing ,Vaccination ,Spike Glycoprotein, Coronavirus ,biology.protein ,Medicine ,Antibody - Abstract
Background Highly efficacious vaccines against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) have been developed. However, the emergence of viral variants that are more infectious than the earlier SARS-CoV-2 strains is concerning. Several of these viral variants have the potential to partially escape neutralizing antibody responses, warranting continued immune-monitoring. Methods We used a panel of 30 post-mRNA vaccination sera to determine neutralization and RBD and spike binding activity against a number of emerging viral variants. The virus neutralization was determined using authentic SARS-CoV-2 clinical isolates in an assay format that mimics physiological conditions. Findings We tested seven currently circulating viral variants of concern/interest, including the three Iota sublineages, Alpha (E484K), Beta, Delta and Lambda in neutralization assays. We found only small decreases in neutralization against Iota and Delta. The reduction was stronger against a sub-variant of Lambda, followed by Beta and Alpha (E484K). Lambda is currently circulating in parts of Latin America and was detected in Germany, the US and Israel. Of note, reduction in a receptor binding domain and spike binding assay that also included Gamma, Kappa and A.23.1 was negligible. Interpretation Taken together, these findings suggest that mRNA SARS-CoV-2 vaccines may remain effective against these viral variants of concern/interest and that spike binding antibody tests likely retain specificity in the face of evolving SARS-CoV-2 diversity. Funding This work is part of the PARIS/SPARTA studies funded by the NIAID Collaborative Influenza Vaccine Innovation Centers (CIVIC) contract 75N93019C00051. In addition, this work was also partially funded by the Centers of Excellence for Influenza Research and Surveillance (CEIRS, contract # HHSN272201400008C), the JPB Foundation, the Open Philanthropy Project (research grant 2020-215611 (5384), by anonymous donors and by the Serological Sciences Network (SeroNet) in part with Federal funds from the National Cancer Institute, National Institutes of Health, under Contract No. 75N91019D00024, Task Order No. 75N91020F00003.
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- 2021
26. Determinants of early antibody responses to COVID-19 mRNA vaccines in exposed and naive healthcare workers
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Alberto L. García-Basteiro, Natalia Ortega, Anna Vilella, Ana Angulo, Alfredo Mayor, Laura Puyol, Anna Llupià, Sonia Barroso, Gemma Salmeron, Pilar Varela, Rocío Rubio, Marta Ribes, Luis Izquierdo, Pablo Hernández-Luis, Antoni Trilla, Carlo Carolis, Robert A. Mitchell, María José Molina, Gemma Moncunill, Ruth Aguilar, Pablo Engel, Natalia Rodrigo Melero, Alfons Jiménez, Marta Tortajada, Cristina Castellana, Susana Méndez, Carlota Dobaño, Diana Barrios, Marta Vidal, and Pau Rodo
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medicine.medical_specialty ,business.industry ,Influenza research ,Vaccination ,Antigen ,Internal medicine ,Cohort ,Health care ,medicine ,media_common.cataloged_instance ,Avidity ,European union ,business ,Adverse effect ,media_common - Abstract
BackgroundTwo doses of mRNA vaccination have shown >94% efficacy at preventing COVID-19 mostly in naive adults, but it is not clear if the second dose is needed to maximize effectiveness in those previously exposed to SARS-CoV-2 and what other factors affect responsiveness.MethodsWe measured IgA, IgG and IgM levels against SARS-CoV-2 spike (S) and nucleocapsid (N) antigens from the wild-type and S from the Alpha, Beta and Gamma variants of concern, after BNT162b2 (Pfizer/BioNTech) or mRNA-1273 (Moderna) vaccination in a cohort of health care workers (N=578). Neutralizing capacity and antibody avidity were evaluated. Data were analyzed in relation to COVID-19 history, comorbidities, vaccine doses, brand and adverse events.FindingsVaccination induced robust IgA and IgG levels against all S antigens. Neutralization capacity and S IgA and IgG levels were higher in mRNA-1273 vaccinees, previously SARS-CoV-2 exposed, particularly if symptomatic, and in those experiencing systemic adverse effects. A second dose in pre-exposed did not increase antibody levels. Smoking and comorbidities were associated with lower neutralization and antibody levels. Among fully vaccinated, 6.3% breakthroughs were detected up to 189 days post-vaccination. Among pre-exposed non-vaccinated, 90% were IgG seropositive more than 300 days post-infection.InterpretationOur data support administering a single-dose in pre-exposed healthy individuals. However, heterogeneity of responses suggests that personalized recommendations may be necessary depending on COVID-19 history and life-style. Higher mRNA-1273 immunogenicity would be beneficial for those expected to respond worse to vaccination. Persistence of antibody levels in pre-exposed unvaccinated indicates maintenance of immunity up to one year.FundingThis work was supported by Institut de Salut Global de Barcelona (ISGlobal) internal funds, in-kind contributions from Hospital Clínic de Barcelona, the Fundació Privada Daniel Bravo Andreu, and European Institute of Innovation and Technology (EIT) Health (grant number 20877), supported by the European Institute of Innovation and Technology, a body of the European Union receiving support from the H2020 Research and Innovation Programme. We acknowledge support from the Spanish Ministry of Science and Innovation and State Research Agency through the “Centro de Excelencia Severo Ochoa 2019-2023” Program (CEX2018-000806-S), and support from the Generalitat de Catalunya through the CERCA Program. L. I. work was supported by PID2019-110810RB-I00 grant from the Spanish Ministry of Science & Innovation. Development of SARS-CoV-2 reagents was partially supported by the National Institute of Allergy and Infectious Diseases Centers of Excellence for Influenza Research and Surveillance (contract number HHSN272201400008C). The funders had no role in study design, data collection and analysis, the decision to publish, or the preparation of the manuscript.
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- 2021
27. Johns Hopkins University, The secures contract for NIAID Centers of Excellence for Influenza Research and Response (CEIRR)
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Influenza ,Influenza research ,Contract agreement ,News, opinion and commentary ,Johns Hopkins University - Abstract
United States based Johns Hopkins University, The has secured contract from NATIONAL INSTITUTES OF HEALTH for NIAID Centers of Excellence for Influenza Research and Response (CEIRR). The contract is valued [...]
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- 2021
28. Global environmental drivers of influenza.
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Deyle, Ethan R., Sugihara, George, Maher, M. Cyrus, Hernandez, Ryan D., and Basu, Sanjay
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INFLUENZA research , *ENVIRONMENTALLY induced diseases , *EPIDEMICS , *EPIDEMIOLOGY , *BIOLOGICAL research - Abstract
In temperate countries, influenza outbreaks are well correlated to seasonal changes in temperature and absolute humidity. However, tropical countries have much weaker annual climate cycles, and outbreaks show less seasonality and are more difficult to explain with environmental correlations. Here, we use convergent cross mapping, a robust test for causality that does not require correlation, to test alternative hypotheses about the global environmental drivers of influenza outbreaks from country-level epidemic time series. By moving beyond correlation, we show that despite the apparent differences in outbreak patterns between temperate and tropical countries, absolute humidity and, to a lesser extent, temperature drive influenza outbreaks globally. We also find a hypothesized U-shaped relationship between absolute humidity and influenza that is predicted by theory and experiment, but hitherto has not been documented at the population level. The balance between positive and negative effects of absolute humidity appears to be mediated by temperature, and the analysis reveals a key threshold around 75 °F. The results indicate a unified explanation for environmental drivers of influenza that applies globally. [ABSTRACT FROM AUTHOR]
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- 2016
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29. Conformational Response of Influenza A M2 Transmembrane Domain to Amantadine Drug Binding at Low pH (pH 5.5).
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Georgieva, Elka R., Borbat, Peter P., Grushin, Kirill, Stoilova-McPhie, Svetla, Kulkarni, Nichita J., Zhichun Liang, Freed, Jack H., Blackburn, Mandy, Chakrapani, Sudha, and Garcia, Ines
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PROTEIN research ,INFLUENZA research ,PROTONS ,MEMBRANE proteins ,LIPIDS ,ELECTRON microscopy ,NITROXIDES - Abstract
The M2 protein from influenza A plays important roles in its viral cycle. It contains a single transmembrane helix, which oligomerizes into a homotetrameric proton channel that conducts in the low-pH environment of the host-cell endosome and Golgi apparatus, leading to virion uncoating at an early stage of infection. We studied conformational rearrangements that occur in the M2 core transmembrane domain residing on the lipid bilayer, flanked by juxtamembrane residues (M2TMD
21-49 fragment), upon its interaction with amantadine drug at pH 5.5 when M2 is conductive. We also tested the role of specific mutation and lipid chain length. Electron spin resonance (ESR) spectroscopy and electron microscopy were applied to M2TMD21-49 , labeled at the residue L46C with either nitroxide spin-label or Nanogold® reagent, respectively. Electron microscopy confirmed that M2TMD21-49 reconstituted into DOPC/POPS at 1:10,000 peptide-to-lipid molar ratio (P/L) either with or without amantadine, is an admixture of monomers, dimers, and tetramers, confirming our model based on a dimer intermediate in the assembly of M2TMD21-49 . As reported by double electron-electron resonance (DEER), in DOPC/POPS membranes amantadine shifts oligomer equilibrium to favor tetramers, as evidenced by an increase in DEER modulation depth for P/L's ranging from 1:18,000 to 1:160. Furthermore, amantadine binding shortens the inter-spin distances (for nitroxide labels) by 5-8 Å, indicating drug induced channel closure on the C-terminal side. No such effect was observed for the thinner membrane of DLPC/DLPS, emphasizing the role of bilayer thickness. The analysis of continuous wave (cw) ESR spectra of spin-labeled L46C residue provides additional support to a more compact helix bundle in amantadine-bound M2TMD21-49 through increased motional ordering. In contrast to wild-type M2TMD21-49 , the amantadine-bound form does not exhibit noticeable conformational changes in the case of G34A mutation found in certain drug-resistant influenza strains. Thus, the inhibited M2TMD21-49 channel is a stable tetramer with a closed C-terminal exit pore. This work is aimed at contributing to the development of structure-based anti-influenza pharmaceuticals. [ABSTRACT FROM AUTHOR]- Published
- 2016
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30. Increased Mortality Rates Associated with Staphylococcus aureus and Influenza Co-infection, Maryland and Iowa, USA(1).
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McDanel, Jennifer S., Perencevich, Eli N., Storm, Jeremy, Diekema, Daniel J., Herwaldt, Loreen, Johnson, J. Kristie, Winokur, Patricia L., and Schweizer, Marin L.
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STAPHYLOCOCCUS aureus infections , *STAPHYLOCOCCUS aureus , *INFLUENZA research , *RESPIRATORY infections , *RESPIRATORY diseases - Abstract
We retrospectively analyzed data for 195 respiratory infection patients who had positive Staphyloccocus aureus cultures and who were hospitalized in 2 hospitals in Iowa and Maryland, USA, during 2003-2009. Odds for death for patients who also had influenza-positive test results were >4 times higher than for those who had negative influenza test results. [ABSTRACT FROM AUTHOR]
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- 2016
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31. Application of the backstepping method to the prediction of increase or decrease of infected population.
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Toshikazu Kuniya and Hideki Sano
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AGE-structured populations ,PARTIAL differential equations ,FORECASTING ,INFLUENZA research ,BOX-Jenkins forecasting - Abstract
Background: In mathematical epidemiology, age-structured epidemic models have usually been formulated as the boundary-value problems of the partial differential equations. On the other hand, in engineering, the backstepping method has recently been developed and widely studied by many authors. Methods: Using the backstepping method, we obtained a boundary feedback control which plays the role of the threshold criteria for the prediction of increase or decrease of newly infected population. Under an assumption that the period of infectiousness is same for all infected individuals (that is, the recovery rate is given by the Dirac delta function multiplied by a sufficiently large positive constant), the prediction method is simplified to the comparison of the numbers of reported cases at the current and previous time steps. Results: Our prediction method was applied to the reported cases per sentinel of influenza in Japan from 2006 to 2015 and its accuracy was 0.81 (404 correct predictions to the total 500 predictions). It was higher than that of the ARIMA models with different orders of the autoregressive part, differencing and moving-average process. In addition, a proposed method for the estimation of the number of reported cases, which is consistent with our prediction method, was better than that of the best-fitted ARIMA model ARIMA(1, 1, 0) in the sense of mean square error. Conclusions: Our prediction method based on the backstepping method can be simplified to the comparison of the numbers of reported cases of the current and previous time steps. In spite of its simplicity, it can provide a good prediction for the spread of influenza in Japan. [ABSTRACT FROM AUTHOR]
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- 2016
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32. Molecular basis for universal HLA-A*0201-restricted CD8+ T-cell immunity against influenza viruses.
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Valkenburg, Sophie A., Josephs, Tracy M., Clemens, E. Bridie, Grant, Emma J., Thi H. O. Nguyen, Wang, George C., Price, David A., Miller, Adrian, Tong, Steven Y. C., Thomas, Paul G., Doherty, Peter C., Rossjohn, Jamie, Gras, Stephanie, and Kedzierska, Katherine
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INFLUENZA research , *T cells , *CD8 antigen , *T-cell receptor genes , *PEPTIDES - Abstract
Memory CD8+ T lymphocytes (CTLs) specific for antigenic peptides derived from internal viral proteins confer broad protection against distinct strains of influenza A virus (IAV). However, immune efficacy can be undermined by the emergence of escape mutants. To determine how T-cell receptor (TCR) composition relates to IAV epitope variability, we used ex vivo peptide-HLA tetramer enrichment and single-cell multiplex analysis to compare TCRs targeted to the largely conserved HLA-A*0201-M158 and the hypervariable HLA-B*3501-NP418 antigens. The TCRαβs for HLA-B*3501-NP418 + CTLs varied among individuals and across IAV strains, indicating that a range of mutated peptides will prime different NP418-specific CTL sets. Conversely, a dominant public TRAV27/TRBV19+ TCRαβ was selected in HLA-A*0201+ donors responding to M158. This public TCR cross-recognized naturally occurring M158 variants complexed with HLA-A*0201. Ternary structures showed that induced-fit molecular mimicry underpins TRAV27/TRBV19+ TCR specificity for the WT and mutant M158 peptides, suggesting the possibility of universal CTL immunity in HLA-A*0201+ individuals. Combined with the high population frequency of HLA-A*0201, these data potentially explain the relative conservation of M158. Moreover, our results suggest that vaccination strategies aimed at generating broad protection should incorporate variant peptides to elicit cross-reactive responses against other specificities, especially those that may be relatively infrequent among IAV-primed memory CTLs. [ABSTRACT FROM AUTHOR]
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- 2016
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33. Rapid Evolution of the CD8+ TCR Repertoire in Neonatal Mice.
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Carey, Alison J., Gracias, Donald T., Thayer, Jillian L., Boesteanu, Alina C., Kumova, Ogan K., Mueller, Yvonne M., Hope, Jennifer L., Fraietta, Joseph A., van Zessen, David B. H., and Katsikis, Peter D.
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T cells , *INFLUENZA research , *ANIMAL models in research , *LABORATORY mice , *INFECTION - Abstract
Currently, there is little consensus regarding the most appropriate animal model to study acute infection and the virus-specific CD8+ T cell (CTL) responses in neonates. TCRβ high-throughput sequencing in naive CTL of differently aged neonatal mice was performed, which demonstrated differential Vβ family gene usage. Using an acute influenza infection model, we examined the TCR repertoire of the CTL response in neonatal and adult mice infected with influenza type A virus. Three-day-old mice mounted a greatly reduced primary NP(366-374)-specific CTL response when compared with 7-d-old and adult mice, whereas secondary CTL responses were normal. Analysis of NP(366-374)-specific CTL TCR repertoire revealed different Vβ gene usage and greatly reduced public clonotypes in 3-d-old neonates. This could underlie the impaired CTL response in these neonates. To directly test this, we examined whether controlling the TCR would restore neonatal CTL responses. We performed adoptive transfers of both nontransgenic and TCR-transgenic OVA(257-264)-specific (OT-I) CD8+ T cells into influenza-infected hosts, which revealed that naive neonatal and adult OT-I cells expand equally well in neonatal and adult hosts. In contrast, nontransgenic neonatal CD8+ T cells when transferred into adults failed to expand. We further demonstrate that differences in TCR avidity may contribute to decreased expansion of the endogenous neonatal CTL. These studies highlight the rapid evolution of the neonatal TCR repertoire during the first week of life and show that impaired neonatal CTL immunity results from an immature TCR repertoire, rather than intrinsic signaling defects or a suppressive environment. [ABSTRACT FROM AUTHOR]
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- 2016
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34. Influenza-like illness in an urban community of Salvador, Brazil: incidence, seasonality and risk factors.
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Oliveira, Carlos R., Costa, Gisela S. R., Paploski, Igor A. D., Kikuti, Mariana, Kasper, Amelia M., Silva, Monaise M. O., Tavares, Aline S., Cruz, Jaqueline S., Queiroz, Tássia L., Lima, Helena C. A. V., Calcagno, Juan, Reis, Mitermayer G., Weinberger, Daniel M., Shapiro, Eugene D., Ko, Albert I., and Ribeiro, Guilherme S.
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INFLUENZA research , *PUBLIC health , *COMMUNITY health services , *LUNG diseases , *THROAT diseases , *INFLUENZA epidemiology , *COMPARATIVE studies , *RESEARCH methodology , *MEDICAL cooperation , *RESEARCH , *RESEARCH funding , *SEASONS , *CITY dwellers , *EVALUATION research , *DISEASE incidence - Abstract
Background: Our understanding of the epidemiology of influenza is limited in tropical regions, which in turn has hampered identifying optimal region-specific policy to diminish disease burden. Influenza-like illness (ILI) is a clinical diagnosis that can be used as a surrogate for influenza. This study aimed to define the incidence and seasonality of ILI and to assess its association with climatic variables and school calendar in an urban community in the tropical region of Salvador, Brazil.Methods: Between 2009 and 2013, we conducted enhanced community-based surveillance for acute febrile illnesses (AFI) among patients ≥ 5 years of age in a slum community emergency unit in Salvador, Brazil. ILI was defined as a measured temperature of ≥ 37.8 °C or reported fever in a patient with cough or sore throat for ≤ 7 days, and negative test results for dengue and leptospirosis. Seasonality was analyzed with a harmonic regression model. Negative binomial regression models were used to correlate ILI incidence with rainfall, temperature, relative humidity and the number of days per month that schools were in session while controlling for seasonality.Results: There were 2,651 (45.6% of 5,817 AFI patients) ILI cases with a mean annual incidence of 60 cases/1,000 population (95% CI 58-62). Risk of ILI was highest among 5-9 year olds with an annual incidence of 105 cases/1,000 population in 2009. ILI had a clear seasonal pattern with peaks between the 35-40th week of the year. ILI peaks were higher and earlier in 5-9 year olds compared with > 19 year olds. No association was seen between ILI and precipitation, relative humidity or temperature. There was a significant association between the incidence of ILI in children 5-9 years of age and number of scheduled school days per month.Conclusions: We identified a significant burden of ILI with distinct seasonality in the Brazilian tropics and highest rates among young school-age children. Seasonal peaks of ILI in children 5-9 years of age were positively associated with the number of school days, indicating that children may play a role in the timing of seasonal influenza transmission. [ABSTRACT FROM AUTHOR]- Published
- 2016
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35. Drug Repurposing Identifies Inhibitors of Oseltamivir-Resistant Influenza Viruses.
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Bao, Ju, Marathe, Bindumadhav, Govorkova, Elena A., and Zheng, Jie J.
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OSELTAMIVIR , *INFLUENZA research , *NEURAMINIDASE , *THERAPEUTICS research , *GENETIC drift - Abstract
The neuraminidase (NA) inhibitor, oseltamivir, is a widely used anti-influenza drug. However, oseltamivir-resistant H1N1 influenza viruses carrying the H275Y NA mutation spontaneously emerged as a result of natural genetic drift and drug treatment. Because H275Y and other potential mutations may generate a future pandemic influenza strain that is oseltamivir-resistant, alternative therapy options are needed. Herein, we show that a structure-based computational method can be used to identify existing drugs that inhibit resistant viruses, thereby providing a first line of pharmaceutical defense against this possible scenario. We identified two drugs, nalidixic acid and dorzolamide, that potently inhibit the NA activity of oseltamivir-resistant H1N1 viruses with the H275Y NA mutation at very low concentrations, but have no effect on wild-type H1N1 NA even at a much higher concentration, suggesting that the oseltamivir-resistance mutation itself caused susceptibility to these drugs. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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36. The impact of national vaccination policy changes on influenza incidence in the Netherlands.
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McDonald, Scott A., Asten, Liselotte, Hoek, Wim, Donker, Gé A., and Wallinga, Jacco
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VACCINATION , *MEDICAL care , *HEALTH policy , *INFLUENZA research , *INFLUENZA prevention - Abstract
Background We assessed the impact of two major modifications of the Dutch National Influenza Prevention Programme - the introduction in 1997 of free-of-charge vaccination to persons aged ≥65 years and to high-risk groups (previously only advised, and not free of charge), and the lowering of the eligible age to 60 years in 2008 - on the estimated incidence of influenza infection leading to influenza-like illness ( ILI). Methods Additive negative-binomial segmented regression models were fitted to ILI data from GP sentinel surveillance in two-eight-season intervals (1993/4 to 2000/1, 2004/5 to 2011/12, comparing pre- and post-policy-change periods within each interval), with laboratory virological reporting of samples positive for influenza or other ILI-causing pathogens as covariates. Results For the 2008 policy change, there was a significant step decrease in influenza contribution considering all ages (=−111 per 100 positives; 95% CI: −162, −65·0), <60 years and 60-64 years age groups ( B = −92·1 per 100; 95% CI: −134, −55·5; B = −5·2; 95% CI: −10·3, −1·2, respectively). There was no evidence for a decrease associated with the 1997 policy change targeting the ≥65 years age group. Conclusions In the Netherlands, a 56% reduction in influenza contribution was associated with the 2008 policy targeting 60-64 year-olds, but there was no effect of the earlier policy targeting ≥65-year-olds, for whom vaccination coverage was already rising before the policy change. [ABSTRACT FROM AUTHOR]
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- 2016
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37. Influenza-Related Hospitalizations and Poverty Levels - United States, 2010-2012.
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Hadler, James L., Yousey-Hindes, Kimberly, Pérez, Alejandro, Anderson, Evan J., Bargsten, Marisa, Bohm, Susan R., Hill, Mary, Hogan, Brenna, Laidler, Matt, Lindegren, Mary Lou, Lung, Krista L., Mermel, Elizabeth, Miller, Lisa, Morin, Craig, Parker, Erin, Zansky, Shelley M., and Chaves, Sandra S.
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INFLUENZA research , *HOSPITAL care , *POVERTY in the United States , *INFLUENZA vaccines , *ANTIVIRAL agents , *MEDICAL care societies - Abstract
Annual influenza vaccine is recommended for all persons aged ≥6 months in the United States, with recognition that some persons are at risk for more severe disease (1). However, there might be previously unrecognized demographic groups that also experience higher rates of serious influenza-related disease that could benefit from enhanced vaccination efforts. Socioeconomic status (SES) measures that are area-based can be used to define demographic groups when individual SES data are not available (2). Previous surveillance data analyses in limited geographic areas indicated that influenza-related hospitalization incidence was higher for persons residing in census tracts that included a higher percentage of persons living below the federal poverty level (3-5). To determine whether this association occurs elsewhere, influenza hospitalization data collected in 14 FluSurv-NET sites covering 27 million persons during the 2010-11 and 2011-12 influenza seasons were analyzed. The age-adjusted incidence of influenza-related hospitalizations per 100,000 person-years in high poverty (≥20% of persons living below the federal poverty level) census tracts was 21.5 (95% confidence interval [CI]: 20.7-22.4), nearly twice the incidence in low poverty (<5% of persons living below the federal poverty level) census tracts (10.9, 95% CI: 10.3-11.4). This relationship was observed in each surveillance site, among children and adults, and across racial/ethnic groups. These findings suggest that persons living in poorer census tracts should be targeted for enhanced influenza vaccination outreach and clinicians serving these persons should be made aware of current recommendations for use of antiviral agents to treat influenza (6). [ABSTRACT FROM AUTHOR]
- Published
- 2016
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38. Lst1 deficiency has a minor impact on course and outcome of the host response to influenza A H1N1 infections in mice.
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Leist, Sarah R., Kollmus, Heike, Hatesuer, Bastian, Lambertz, Ruth L. O., and Schughart, Klaus
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INFLUENZA research , *RESPIRATORY infections , *VIRUS diseases , *INFLUENZA A virus, H1N1 subtype - Abstract
Background: Previously, we performed a quantitative trait locus (QTL) mapping study in BXD recombinant inbred mice to identify host genetic factors that confer resistance to influenza A virus infection. We found Lst1 (leukocyte specific transcript 1) as one of the most promising candidate genes in the Qivr17-2 locus because it is non-functional in DBA/2 J mice. Several studies have proposed that LST1 plays a role in the immune response to inflammatory diseases in humans and has additional immune-regulatory functions. Here, we evaluated the relevance of LST1 for the host response to influenza A infection in B6-Lst1-/- mutant mice. Findings: To investigate the role of LST1, we infected B6-Lst1-/- mutant and C57BL/6 N wild-type mice with a low-virulent influenza A virus (PR8M; H1N1). Lst1 deficient mice exhibited significantly increased body weight loss at days 5 and 6 after infection and slightly increased lethality compared to infected wild-type mice. Determination of viral loads, histopathological examination and analysis of immune cell composition in bronchoalveolar lavage of infected lungs did not reveal any obvious differences between KO and wild-type mice. Conclusions: The absence of Lst1 leads to a slightly more susceptible phenotype. However, deletion of Lst1 in DBA/2 J mice alone does not explain the high susceptibility of this strain to PR8M influenza infections. [ABSTRACT FROM AUTHOR]
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- 2016
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39. Model-Based Comprehensive Analysis of School Closure Policies for Mitigating Influenza Epidemics and Pandemics.
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Fumanelli, Laura, Ajelli, Marco, Merler, Stefano, Ferguson, Neil M., and Cauchemez, Simon
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SCHOOL closings , *INFLUENZA research , *EPIDEMIC research , *PANDEMICS , *SCHOOL absenteeism - Abstract
School closure policies are among the non-pharmaceutical measures taken into consideration to mitigate influenza epidemics and pandemics spread. However, a systematic review of the effectiveness of alternative closure policies has yet to emerge. Here we perform a model-based analysis of four types of school closure, ranging from the nationwide closure of all schools at the same time to reactive gradual closure, starting from class-by-class, then grades and finally the whole school. We consider policies based on triggers that are feasible to monitor, such as school absenteeism and national ILI surveillance system. We found that, under specific constraints on the average number of weeks lost per student, reactive school-by-school, gradual, and county-wide closure give comparable outcomes in terms of optimal infection attack rate reduction, peak incidence reduction or peak delay. Optimal implementations generally require short closures of one week each; this duration is long enough to break the transmission chain without leading to unnecessarily long periods of class interruption. Moreover, we found that gradual and county closures may be slightly more easily applicable in practice as they are less sensitive to the value of the excess absenteeism threshold triggering the start of the intervention. These findings suggest that policy makers could consider school closure policies more diffusely as response strategy to influenza epidemics and pandemics, and the fact that some countries already have some experience of gradual or regional closures for seasonal influenza outbreaks demonstrates that logistic and feasibility challenges of school closure strategies can be to some extent overcome. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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40. Accelerating Influenza Research: Vaccines, Antivirals, Immunomodulators and Monoclonal Antibodies. The Manufacture of a New Wild-Type H3N2 Virus for the Human Viral Challenge Model.
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Fullen, Daniel J., Noulin, Nicolas, Catchpole, Andrew, Fathi, Hosnieh, Murray, Edward J., Mann, Alex, Eze, Kingsley, Balaratnam, Ganesh, Borley, Daryl W., Gilbert, Anthony, and Lambkin-Williams, Rob
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INFLUENZA research , *ANTIVIRAL agents , *IMMUNOLOGICAL adjuvants , *MONOCLONAL antibodies , *INFLUENZA A virus, H3N2 subtype - Abstract
Background: Influenza and its associated diseases are a major cause of morbidity and mortality. The United States Advisory Committee on Immunization Practices recommends influenza vaccination for everyone over 6 months of age. The failure of the flu vaccine in 2014–2015 demonstrates the need for a model that allows the rapid development of novel antivirals, universal/intra-seasonal vaccines, immunomodulators, monoclonal antibodies and other novel treatments. To this end we manufactured a new H3N2 influenza virus in compliance with Good Manufacturing Practice for use in the Human Viral Challenge Model. Methods and Strain Selection: We chose an H3N2 influenza subtype, rather than H1N1, given that this strain has the most substantial impact in terms of morbidity or mortality annually as described by the Centre for Disease Control. We first subjected the virus batch to rigorous adventitious agent testing, confirmed the virus to be wild-type by Sanger sequencing and determined the virus titres appropriate for human use via the established ferret model. We built on our previous experience with other H3N2 and H1N1 viruses to develop this unique model. Human Challenge and Conclusions: We conducted an initial safety and characterisation study in healthy adult volunteers, utilising our unique clinical quarantine facility in London, UK. In this study we demonstrated this new influenza (H3N2) challenge virus to be both safe and pathogenic with an appropriate level of disease in volunteers. Furthermore, by inoculating volunteers with a range of different inoculum titres, we established the minimum infectious titre required to achieve reproducible disease whilst ensuring a sensitive model that can be translated to design of subsequent field based studies. Trial Registration: ClinicalTrials.gov [ABSTRACT FROM AUTHOR]
- Published
- 2016
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41. PRODUCCIÓN CIENTÍFICA DE LOS INVESTIGADORES DEL INS.
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RESEARCH , *SCIENTIFIC surveys , *PSORIASIS , *INFLUENZA research , *HIV , *TUBERCULOSIS research , *TUBERCULOSIS mortality - Abstract
The article focuses on papers on research on several scientific topics. Topics discussed include analysis of evolution of scientific collaboration with regard to scientific production on psoriasis research; determination of seasonal patterns of influenza in American tropics; and study on deaths due to human immunodeficiency virus (HIV) associated tuberculosis between 2005 and 2008 in Lima, Peru.
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- 2016
42. Burden of Influenza-Related Hospitalizations and Attributable Mortality in Pediatric Acute Lymphoblastic Leukemia.
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Lee, Grace E., Fisher, Brian T., Rui Xiao, Coffin, Susan E., Feemster, Kristen, Seif, Alix E., Bagatell, Rochelle, Yimei Li, Yuan-Shung V. Huang, and Aplenc, Richard
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EPIDEMIOLOGICAL research , *HOSPITAL care , *INFLUENZA research , *LEUKEMIA , *PEDIATRIC research - Abstract
Background. Influenza can be severe in patients with underlying malignancy; however, the rate of influenza hospitalizations and attributable mortality in children with cancer is unknown. Methods. We performed a retrospective cohort study among 10 698 children with new-onset acute lymphoblastic leukemia (ALL) from 41 US children's hospitals between January 1999 and September 2011. Influenza-related hospitalizations were identified using ICD-9 discharge diagnosis codes, excluding hospitalizations during low-prevalence influenza periods. Follow-up was censored at the earliest of 5 events: end of study period, expected end of chemotherapy, last known hospitalization, hematopoietic stem cell transplant, or death. Data were collected on hospitalization characteristics and resource utilization. Hospitalization rates were calculated using season-adjusted person-time. Crude attributable in-hospital mortality was calculated using baseline mortality for noninfluenza hospitalizations during the same period. Subgroup analysis was performed by time from ALL diagnosis and by age category. Results. The rate of influenza-related hospitalizations was 618.3 per 100 000 person-months. Rates were similar by time from ALL diagnosis and across age categories. Overall attributable in-hospital mortality was 1.0% (95% confidence interval [CI], 0.3%-2.3%) and was highest for children <6 months from diagnosis (1.6%; 95% CI, 0.4%-4.5%) and children <2 years of age (6.7%; 95% CI, 1.3%-22.7%). Total length of stay, days of broad-spectrum antibiotic exposure, and duration of intensive care were significantly greater for influenza-related hospitalizations compared with noninfluenza hospitalizations. Conclusions. The burden of influenza-related hospitalizations in children with ALL is high and associated with significantly increased resource utilization and attributable mortality. [ABSTRACT FROM AUTHOR]
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- 2015
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43. Infection with the SARS-CoV-2 Delta Variant is Associated with Higher Infectious Virus Loads Compared to the Alpha Variant in both Unvaccinated and Vaccinated Individuals
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Chun Huai Luo, Maggie Li, Andrew Pekosz, Heba H. Mostafa, Matthew D. Schwartz, Nicholas J Swanson, C. Paul Morris, David C. Gaston, Jaiprasath Sachithanandham, Eili Y. Klein, and Adannaya Amadi
- Subjects
Delta ,Vaccination ,Coronavirus disease 2019 (COVID-19) ,Transmission (medicine) ,business.industry ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Alpha (ethology) ,Medicine ,Influenza research ,business ,Virology ,Infectious virus - Abstract
BackgroundThe emerging SARS-CoV-2 variant of concern (VOC) B.1.6.17.2 (Delta) quickly displaced the B.1.1.7 (Alpha) and is associated with increases in COVID-19 cases nationally. The Delta variant has been associated with greater transmissibility and higher viral RNA loads in both unvaccinated and fully vaccinated individuals. Data is lacking regarding the infectious virus load in Delta infected individuals and how that compares to individuals infected with other SARS-CoV-2 lineages.MethodsWhole genome sequencing of 2,785 clinical isolates was used to characterize the prevalence of SARS-CoV-2 lineages circulating in the National Capital Region between January and July 2021. Clinical chart reviews were performed for the Delta, Alpha, and B.1.2 (a control predominant lineage prior to both VOCs) variants to evaluate disease severity and outcome and Cycle threshold values (Cts) were compared. The presence of infectious virus was determined using Vero-TMPRSS2 cells and anti-SARS-CoV-2 IgG levels were determined from upper respiratory specimen. An analysis of infection in unvaccinated and fully vaccinated populations was performed.ResultsThe Delta variant displaced the Alpha variant to constitute 88.2% of the circulating lineages in the National Capital Region by July, 2021. The Delta variant associated with increased breakthrough infections in fully vaccinated individuals that were mostly symptomatic when compared to the Alpha breakthrough infections, though it is important to note there was a significantly longer period of time between vaccination and infection with Delta infections. The recovery of infectious virus on cell culture was significantly higher with the Delta variant compared to Alpha in both vaccinated and unvaccinated groups. The impact of vaccination on reducing the recovery of infectious virus from clinical samples was only observed with Alpha variant infections but was strongly associated with low localized SARS-CoV-2 IgG for both variants. A comparison of Ct values showed a significant decrease in the Delta compared to Alpha with no significant differences between unvaccinated and vaccinated groups.ConclusionsOur data indicate that the Delta variant is associated with increased infectious virus loads when compared to the Alpha variant and decreased upper respiratory antiviral IgG levels. Measures to reduce transmission in addition to increasing vaccinations rates have to be implemented to reduce Delta variant spread.FundingNIH/NIAID Center of Excellence in Influenza Research and Surveillance contract HHS N2772201400007C, Johns Hopkins University, Maryland department of health, Centers for Disease Control and Prevention contract 75D30121C11061.
- Published
- 2021
44. An Antigenic Thrift-Based Approach to Influenza Vaccine Design
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Uri Obolski, Matthew Edmans, Craig Thompson, Jai S Bolton, Hannah Klim, and Judith Wellens
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0301 basic medicine ,POPULATION-DYNAMICS ,Influenza vaccine ,HEMAGGLUTININ ,Immunology ,Context (language use) ,NUCLEOTIDE-SEQUENCES ,Review ,Biology ,Research & Experimental Medicine ,IMMUNOGENICITY ,Epitope ,Antigenic drift ,Virus ,03 medical and health sciences ,0302 clinical medicine ,A VIRUS ,vaccine ,Drug Discovery ,Evolution of influenza ,Pharmacology (medical) ,PROTECTION ,evolutionary theory ,antigenic drift ,Pharmacology ,Science & Technology ,WITHIN-HOST ,virus diseases ,antigenic thrift ,Influenza research ,EFFICACY ,vaccination ,Virology ,EVOLUTION ,Vaccination ,030104 developmental biology ,Infectious Diseases ,Medicine, Research & Experimental ,ANTIBODY ,Medicine ,influenza ,Life Sciences & Biomedicine ,030217 neurology & neurosurgery - Abstract
The antigenic drift theory states that influenza evolves via the gradual accumulation of mutations, decreasing a host's immune protection against previous strains. Influenza vaccines are designed accordingly, under the premise of antigenic drift. However, a paradox exists at the centre of influenza research. If influenza evolved primarily through mutation in multiple epitopes, multiple influenza strains should co-circulate. Such a multitude of strains would render influenza vaccines quickly inefficacious. Instead, a single or limited number of strains dominate circulation each influenza season. Unless additional constraints are placed on the evolution of influenza, antigenic drift does not adequately explain these observations. Here, we explore the constraints placed on antigenic drift and a competing theory of influenza evolution - antigenic thrift. In contrast to antigenic drift, antigenic thrift states that immune selection targets epitopes of limited variability, which constrain the variability of the virus. We explain the implications of antigenic drift and antigenic thrift and explore their current and potential uses in the context of influenza vaccine design. ispartof: VACCINES vol:9 issue:6 ispartof: location:Switzerland status: published
- Published
- 2021
45. New Influenza Research Reported from Korea Advanced Institute of Science and Technology (KAIST) (Exogenous Interleukin-33 Contributes to Protective Immunity via Cytotoxic T-Cell Priming against Mucosal Influenza Viral Infection)
- Subjects
Interleukins ,Influenza viruses ,Influenza vaccines ,Physical fitness ,Influenza ,T cells ,Vaccines ,Obesity ,Technology ,Influenza research ,Editors ,Health - Abstract
2019 OCT 12 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Current study results on Influenza have been published. According to news reporting [...]
- Published
- 2019
46. New tool uses swine respiratory cells to study flu viruses
- Subjects
Influenza viruses ,Swine influenza ,Swine ,Scientists ,Influenza research ,Hamsters ,Influenza ,Novels ,Agricultural industry ,South Dakota State University - Abstract
A new tool developed at South Dakota State University (SDSU) may make studying influenza viruses easier, according to an announcement from the university. Scientists have been using cells from chickens, [...]
- Published
- 2019
47. ARS scientist to be honored for swine influenza research
- Subjects
Swine influenza -- Research ,Scientists -- Achievements and awards -- Appreciation ,Genetic research ,Intelligence gathering ,Influenza research ,Influenza ,Agricultural industry ,George Washington University - Abstract
Byline: USDA A USDAAgricultural Research Service scientist will be honored next week for her outstanding work inprofiling the genetic evolution of swine influenza type A virusesandestablishing a national IAV surveillance [...]
- Published
- 2019
48. Korea Advanced Institute of Science and Technology (KAIST) Details Findings in Influenza (Cell-penetrating Mx1 Enhances Anti-viral Resistance Against Mucosal Influenza Viral Infection)
- Subjects
Influenza research ,Protein research ,Mucous membrane -- Medical examination ,Disease susceptibility ,Virus replication ,Biological response modifiers ,Viral proteins ,Influenza ,Physical fitness ,Obesity ,Technology ,Transcription (Genetics) ,Infection ,Interferon ,RNA ,Editors ,Antiviral agents ,Health - Abstract
2019 APR 13 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Research findings on Influenza are discussed in a new report. According to [...]
- Published
- 2019
49. New Antivirals Data Have Been Reported by Researchers at Department of Infectious Disease (Interferon Free Therapy With and Without Ribavirin for Genotype 1 Hcv Cirrhotic Patients In the Real World Experience)
- Subjects
Biological response modifiers -- Analysis ,Communicable diseases -- Genetic aspects -- Care and treatment ,Hepatitis C virus -- Health aspects ,Liver cirrhosis -- Genetic aspects -- Care and treatment ,Influenza research ,Obesity ,Physical fitness ,Liver ,Antiviral agents ,Interferon ,Editors ,Ribavirin ,Medical research ,Health - Abstract
2019 MAR 30 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Investigators publish new report on Drugs and Therapies - Antivirals. According to [...]
- Published
- 2019
50. ST. JUDE CHILDREN'S RESEARCH HOSPITAL, INC. secures contract for NIAID Centers of Excellence for Influenza Research and Response (CEIRR)
- Subjects
Influenza ,Influenza research ,Contract agreement ,News, opinion and commentary - Abstract
United States based ST. JUDE CHILDREN'S RESEARCH HOSPITAL, INC. has secured contract from NATIONAL INSTITUTES OF HEALTH for NIAID Centers of Excellence for Influenza Research and Response (CEIRR). The contract [...]
- Published
- 2021
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