122 results on '"Hopkins AL"'
Search Results
2. Specific Detriment: Barriers and Opportunities for Non-Binary Inclusive Sports in Scotland.
- Author
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Erikainen, Sonja, Vincent, Ben, and Hopkins, Al
- Subjects
GENDER identity ,NONBINARY people ,SPORTS - Abstract
While non-binary gender identities have become increasingly visible in recent years, little research currently exists on the experiences that non-binary people have in sport, where most opportunities to participate are limited to two, mutually exclusive female and male categories. This article provides a starting point for addressing this gap, by reporting findings from a participatory scoping study that explored the barriers that non-binary people face in accessing sporting spaces, communities, and competitions. This study also identified strategies through which these barriers could be overcome, and non-binary inclusion facilitated. Taken together, these strategies suggest that genuine inclusion entails not only new ways of thinking about how gender operates in sport but also alternative ways of thinking about the meaning and value of sport itself. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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3. Unacylated ghrelin promotes adipogenesis in rodent bone marrow via ghrelin O-acyl transferase and GHS-R1a activity: evidence for target cell-induced acylation
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Hopkins, AL, Nelson, TAS, Guschina, IA, Parsons, LC, Lewis, CL, Brown, RC, Christian, H, Davies, JS, and Wells, T
- Subjects
Q1 ,hormones, hormone substitutes, and hormone antagonists - Abstract
Despite being unable to activate the cognate ghrelin receptor (GHS-R), unacylated ghrelin (UAG) possesses a unique activity spectrum that includes promoting bone marrow adipogenesis. Since a receptor mediating this action has not been identified, we re-appraised the potential interaction of UAG with GHS-R in the regulation of bone marrow adiposity. Surprisingly, the adipogenic effects of intra-bone marrow (ibm)-infused acylated ghrelin (AG) and UAG were abolished in male GHS-R-null mice. Gas chromatography showed that isolated tibial marrow adipocytes contain the medium-chain fatty acids utilised in the acylation of UAG, including octanoic acid. Additionally, immunohistochemistry and immunogold electron microscopy revealed that tibial marrow adipocytes show prominent expression of the UAG-activating enzyme ghrelin O-acyl transferase (GOAT), which is located in the membranes of lipid trafficking vesicles and in the plasma membrane. Finally, the adipogenic effect of ibm-infused UAG was completely abolished in GOAT-KO mice. Thus, the adipogenic action of exogenous UAG in tibial marrow is dependent upon acylation by GOAT and activation of GHS-R. This suggests that UAG is subject to target cell-mediated activation – a novel mechanism for manipulating hormone activity.
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- 2017
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4. The Last of a Breed Severe Errol D.
- Author
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Hopkins, Al
- Published
- 2008
5. Proper use of indexable-insert end mills: end milling with indexable carbide inserts is the most demanding of all types of metal cutting
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Hopkins, Al
- Subjects
Carbide cutting tools -- Usage ,Metal-cutting tools -- Usage ,Milling machinery -- Innovations ,Business ,Metals, metalworking and machinery industries - Abstract
The higher the feed and speed, the lower the cost per part milled; so use indexable carbide tools at maximum metal-removal rates, 5 times greater than high-speed-steel end mills, with the understanding that imperfections in cutting will be correspondingly greater and require particular attention.
- Published
- 1982
6. Allosteric Inhibitors against HIV-1 Reverse Transcriptase: Design and Synthesis of MKC-442 Analogues Having an Ω-Functionalized Acyclic Structure
- Author
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Tanaka, H, primary, Walker, RT, additional, Hopkins, AL, additional, Ren, J, additional, Jones, EY, additional, Fujimoto, K, additional, Hayashi, M, additional, Miyasaka, T, additional, Baba, M, additional, Stammers, DK, additional, and Stuart, DI, additional
- Published
- 1998
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7. Acute, flaccid quadriplegia in three cats with suspected coral snake envenomation
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Chrisman, CL, primary, Hopkins, AL, additional, Ford, SL, additional, and Meeks, JC, additional
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- 1996
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8. Sporadic feline hypokalaemic polymyopathy
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Hopkins Al
- Subjects
Male ,General Veterinary ,Muscular Diseases ,business.industry ,Cats ,Medicine ,Animals ,Female ,Hypokalemia ,General Medicine ,Computational biology ,business ,Cat Diseases - Published
- 1989
9. The rehydration contraction of frozen dried muscle
- Author
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Hopkins Al
- Subjects
Contraction (grammar) ,Chemistry ,Muscles ,Biophysics ,Fluid Therapy ,Humans ,General Medicine - Published
- 1958
10. Specific Detriment: Barriers and Opportunities for Non-Binary Inclusive Sports in Scotland
- Author
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Erikainen, Sonja, Vincent, Ben, Hopkins, Al, Erikainen, Sonja, Vincent, Ben, and Hopkins, Al
- Abstract
While non-binary gender identities have become increasingly visible in recent years, little research currently exists on the experiences that non-binary people have in sport, where most opportunities to participate are limited to two, mutually exclusive female and male categories. This paper provides a starting point for addressing this gap, by reporting findings from a participatory scoping study that explored the barriers that non-binary people face in accessing sporting spaces, communities, and competitions. The study also identified strategies through which these barriers could be overcome, and non-binary inclusion facilitated. Taken together, these strategies suggest that genuine inclusion entails not only new ways of thinking about how gender operates in sport, but also alternative ways of thinking about the meaning and value of sport itself.
11. Specific Detriment: Barriers and Opportunities for Non-Binary Inclusive Sports in Scotland
- Author
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Erikainen, Sonja, Vincent, Ben, Hopkins, Al, Erikainen, Sonja, Vincent, Ben, and Hopkins, Al
- Abstract
While non-binary gender identities have become increasingly visible in recent years, little research currently exists on the experiences that non-binary people have in sport, where most opportunities to participate are limited to two, mutually exclusive female and male categories. This paper provides a starting point for addressing this gap, by reporting findings from a participatory scoping study that explored the barriers that non-binary people face in accessing sporting spaces, communities, and competitions. The study also identified strategies through which these barriers could be overcome, and non-binary inclusion facilitated. Taken together, these strategies suggest that genuine inclusion entails not only new ways of thinking about how gender operates in sport, but also alternative ways of thinking about the meaning and value of sport itself.
12. Developing a patient-centered outcome measure for complementary and alternative medicine therapies II: Refining content validity through cognitive interviews
- Author
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Thompson Jennifer J, Kelly Kimberly L, Ritenbaugh Cheryl, Hopkins Allison L, Sims Colette M, and Coons Stephen J
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Complementary and alternative medicine (CAM) ,patient-reported outcomes (PROs) ,cognitive interviewing ,patient-centered care ,non-specific outcomes ,questionnaire development ,retrospective pre-test ,well-being ,Other systems of medicine ,RZ201-999 - Abstract
Abstract Background Available measures of patient-reported outcomes for complementary and alternative medicine (CAM) inadequately capture the range of patient-reported treatment effects. The Self-Assessment of Change questionnaire was developed to measure multi-dimensional shifts in well-being for CAM users. With content derived from patient narratives, items were subsequently focused through interviews on a new cohort of participants. Here we present the development of the final version in which the content and format is refined through cognitive interviews. Methods We conducted cognitive interviews across five iterations of questionnaire refinement with a culturally diverse sample of 28 CAM users. In each iteration, participant critiques were used to revise the questionnaire, which was then re-tested in subsequent rounds of cognitive interviews. Following all five iterations, transcripts of cognitive interviews were systematically coded and analyzed to examine participants' understanding of the format and content of the final questionnaire. Based on this data, we established summary descriptions and selected exemplar quotations for each word pair on the final questionnaire. Results The final version of the Self-Assessment of Change questionnaire (SAC) includes 16 word pairs, nine of which remained unchanged from the original draft. Participants consistently said that these stable word pairs represented opposite ends of the same domain of experience and the meanings of these terms were stable across the participant pool. Five pairs underwent revision and two word pairs were added. Four word pairs were eliminated for redundancy or because participants did not agree on the meaning of the terms. Cognitive interviews indicate that participants understood the format of the questionnaire and considered each word pair to represent opposite poles of a shared domain of experience. Conclusions We have placed lay language and direct experience at the center of questionnaire revision and refinement. In so doing, we provide an innovative model for the development of truly patient-centered outcome measures. Although this instrument was designed and tested in a CAM-specific population, it may be useful in assessing multi-dimensional shifts in well-being across a broader patient population.
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- 2011
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13. The Hill Billies/Al Hopkins & His Buckle Busters, complete recorded works in chronological order. Volume 1, 1925-1926.
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Hill Billies (Musical group), Buckle Busters (Musical group), and Hopkins, Al, performer.
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- 2007
14. The Hill Billies : complete recorded works in chronological order. Vol. 3
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Hill Billies (Musical group), Buckle Busters (Musical group), and Hopkins, Al, performer.
- Published
- 1999
15. Chronic immune mediated polyneuropathy in four cats.
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Clarke J, Meeks JC, Shelton GD, and Hopkins AL
- Published
- 2007
16. Genotypic investigation of a rotavirus cluster at a quaternary-care pediatric hospital.
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Kitt EM, Yoon HW, Comar CE, Smith KP, Harris RM, Esona MD, Gautam R, Mijatovic-Rustempasic S, Hopkins AL, Jaimes J, and Handy LK
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- Child, Humans, Infant, Hospitals, Pediatric, Genotype, Vaccination, Rotavirus genetics, Gastroenteritis, Rotavirus Infections epidemiology, Rotavirus Infections prevention & control, Rotavirus Vaccines
- Abstract
Rotavirus (RV) was a common healthcare-associated infection prior to the introduction of the RV vaccine. Following widespread RV vaccination, healthcare-associated rotavirus cases are rare. We describe an investigation of a cluster of rotavirus infections in a pediatric hospital in which an uncommon genotype not typically circulating in the United States was detected.
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- 2023
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17. A pilot study investigating the effects of a manuka honey sinus rinse compared to a standard sinus rinse on sino-nasal outcome test scores in cystic fibrosis patients.
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Roberts AEL, Xanthe C, Hopkins AL, Bodger O, Lewis P, Mahenthiralingam E, Duckers J, and Jenkins RE
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Background: People with cystic fibrosis (CF) are prone to bacterial respiratory infections; these are often antibiotic resistant, are difficult to treat, and impact on the quality of life and lung function. The upper respiratory tract can act as a reservoir for these pathogens, and as part of clinical care, sinus rinses are used to alleviate symptoms in the upper airway. We have developed a sinus rinse containing manuka honey, to identify whether it can help improve symptoms or reduce the bacterial load., Methods: We will undertake a randomised controlled trial where 30 adults with CF will be recruited and randomised to either the control or intervention group. Both groups will follow a sinus rinse protocol for 30 days (± 7 days); the control group will use the standard of care rinse, and the intervention group will use a manuka honey rinse. Both groups will provide samples at day 0 and day 30. The primary outcome measure will be a change in the 22-item Sino-Nasal Outcome Test (SNOT-22) score. Secondary outcomes will include changes to quality of life (questionnaire), bacterial load/community composition, and sputum viscosity., Discussion: This trial will look at the use of a manuka honey-infused sinus rinse solution on patients diagnosed with cystic fibrosis (CF) suffering with sinusitis; it will allow us to determine the efficacy of the manuka honey sinus rinse compared to standard rinse and will allow us to determine if molecular bacterial diversity analysis will provide in-depth information beyond the usual conventional microbiological. It will allow us to determine the feasibility of recruiting participants to this type of trial, allow us to check participant compliance with the protocol, and inform future studies., Trial Registration: Approval was obtained from the Research Ethics Committee Wales REC7 reference 18/WA/0319. Results of this study will be published at international conferences and in peer-reviewed journals; they will also be presented to the relevant stakeholders and research networks., Trial Registration Number: ClinicalTrials.gov Identifier NCT04589897 (retrospectively registered)., (© 2022. The Author(s).)
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- 2022
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18. Publisher Correction: Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
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Redhead MA, Owen CD, Brewitz L, Collette AH, Lukacik P, Strain-Damerell C, Robinson SW, Collins PM, Schäfer P, Swindells M, Radoux CJ, Hopkins IN, Fearon D, Douangamath A, von Delft F, Malla TR, Vangeel L, Vercruysse T, Thibaut J, Leyssen P, Nguyen TT, Hull M, Tumber A, Hallett DJ, Schofield CJ, Stuart DI, Hopkins AL, and Walsh MA
- Published
- 2021
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19. Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
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Redhead MA, Owen CD, Brewitz L, Collette AH, Lukacik P, Strain-Damerell C, Robinson SW, Collins PM, Schäfer P, Swindells M, Radoux CJ, Hopkins IN, Fearon D, Douangamath A, von Delft F, Malla TR, Vangeel L, Vercruysse T, Thibaut J, Leyssen P, Nguyen TT, Hull M, Tumber A, Hallett DJ, Schofield CJ, Stuart DI, Hopkins AL, and Walsh MA
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- Cell Line, Humans, Serpins chemistry, Viral Proteins chemistry, Antiviral Agents chemistry, Coronavirus 3C Proteases antagonists & inhibitors, Coronavirus Papain-Like Proteases antagonists & inhibitors, Drug Repositioning, Oligopeptides chemistry, COVID-19 Drug Treatment
- Abstract
Effective agents to treat coronavirus infection are urgently required, not only to treat COVID-19, but to prepare for future outbreaks. Repurposed anti-virals such as remdesivir and human anti-inflammatories such as barcitinib have received emergency approval but their overall benefits remain unclear. Vaccines are the most promising prospect for COVID-19, but will need to be redeveloped for any future coronavirus outbreak. Protecting against future outbreaks requires the identification of targets that are conserved between coronavirus strains and amenable to drug discovery. Two such targets are the main protease (M
pro ) and the papain-like protease (PLpro ) which are essential for the coronavirus replication cycle. We describe the discovery of two non-antiviral therapeutic agents, the caspase-1 inhibitor SDZ 224015 and Tarloxotinib that target Mpro and PLpro , respectively. These were identified through extensive experimental screens of the drug repurposing ReFRAME library of 12,000 therapeutic agents. The caspase-1 inhibitor SDZ 224015, was found to be a potent irreversible inhibitor of Mpro (IC50 30 nM) while Tarloxotinib, a clinical stage epidermal growth factor receptor inhibitor, is a sub micromolar inhibitor of PLpro (IC50 300 nM, Ki 200 nM) and is the first reported PLpro inhibitor with drug-like properties. SDZ 224015 and Tarloxotinib have both undergone safety evaluation in humans and hence are candidates for COVID-19 clinical evaluation.- Published
- 2021
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20. Does the Length of the Common Channel as Part of the Total Alimentary Tract Matter? One Year Results from the Multicenter Dutch Common Channel Trial (DUCATI) Comparing Standard Versus Distal Roux-en-Y Gastric Bypass with Similar Biliopancreatic Bowel Limb Lengths.
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Gadiot RPM, Leeman M, Biter LU, Dunkelgrun M, Apers JA, Hof GV, Feskens PB, and Mannaerts GH
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- Humans, Reference Standards, Treatment Outcome, Weight Loss, Gastric Bypass, Laparoscopy, Obesity, Morbid surgery
- Abstract
Purpose: Although the laparoscopic Roux-en-Y Gastric Bypass (LRYGB) is the gold-standard bariatric procedure, it remains uncertain what the optimal bowel limb lengths are to accomplish maximal weight loss while minimizing nutritional deficiencies and related gastro-intestinal complaints. The aim of this randomized controlled multicenter trial is to investigate the effect of significant lengthening of the length of the Roux limb (RL) at the cost of the length of the common channel (CC) while keeping the biliopancreatic limb (BPL) lengths the same on both study arms., Methods: Four hundred forty-four patients were randomized to receive either a Very Long Roux Limb LRYGB (VLRL-LRYGB) (variable RL length, BPL 60 cm, and CC 100 cm) or a Standard LRYGB (S-LRYGB) (RL 150 cm, BPL 60 cm, and a variable CC length). Results at 1-year follow-up for weight loss, effect on obesity-related comorbid conditions, complications, re-operation rate, malnutrition rate, and re-admission rate were investigated., Results: Weight loss at 1-year showed no significant differences for %EWL (84.3% versus 85.3%, p = 0.72) and %TWL (34.2% versus 33.6%, p = 0.359) comparing VLRL-LRYGB versus S-LRYGB. Malabsorption requiring surgical bowel length adjustment was observed in 1.4% in VLRL-LRYGB group versus 0.9% in S-LRYGB group (p = 0.316)., Conclusion: Significant lengthening of the RL at the cost of the common channel seems to have no effect on the weight loss at 1-year follow-up, which supports the theory that absorption of nutrients also occurs in the RL. Nevertheless, long-term results of the VLRL-LRYGB have to be awaited to draw final conclusions as part of the discussion towards optimal limb length in LRYGB surgery.
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- 2020
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21. Pre and postnatal diagnosis of congenital portosystemic shunt: Impact of interventional therapy.
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Mreish S and Hamdan MA
- Abstract
Introduction: Congenital portosystemic shunts (CPSS) are rare vascular malformations that can lead to severe complications. With advanced imaging techniques, diagnosis is becoming more feasible occurring in fetal life. Different approaches have been adopted to manage these cases, with an increased utilization of interventional therapy recently. This cohort aims to describe the course of children diagnosed with CPSS and the impact of interventional therapy on the outcome., Methods: Retrospective chart review was done for all patients who were diagnosed with CPSS in our institution between January 2006 and December 2015., Results: Six patients were diagnosed with CPSS. During this period, 8,680 mothers carrying 9548 fetuses underwent fetal ultrasound examinations. Three patients were diagnosed antenatally at a median [IQ] gestational age of 33 [26-33] weeks, and three patients were diagnosed postnatally at 0, 2, and 43 months, respectively. At a median follow-up of 87 [74-110] months, 5 patients are alive; 4 of whom had received transcatheter closure for different indications, and one who had spontaneous resolution of her CPSS. One infant died at the age of 6 weeks secondary to sepsis., Conclusion: CPSS can result in significant complications in children. Interventional therapy is feasible at any age group, but long-term follow-up is warranted., (© 2019 Publishing services provided by Elsevier B.V. on behalf of King Faisal Specialist Hospital & Research Centre (General Organization), Saudi Arabia.)
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- 2020
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22. Nonvitamin, Nonmineral Dietary Supplement Use in Individuals with Rheumatoid Arthritis.
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Skiba MB, Hopkins LL, Hopkins AL, Billheimer D, and Funk JL
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- Adult, Aged, Analgesics therapeutic use, Anti-Inflammatory Agents therapeutic use, Antirheumatic Agents therapeutic use, Data Collection, Female, Humans, Male, Middle Aged, Minerals, Vitamins, Arthritis, Rheumatoid therapy, Dietary Supplements
- Abstract
Background: Over-the-counter, natural product-based (nonvitamin, nonmineral) dietary supplement (NVNM DS) use is common in adults with rheumatoid arthritis (RA), a group at risk for drug-DS interactions, due to polypharmacy, but this use is underreported to health care providers. Recent dramatic changes in US sales of specific NVNM DS suggest that the prevalence and types of NVNM DS used in RA populations may also have shifted., Objectives: A study was undertaken to identify current and past use of specific NVNM DS for RA disease treatment and to examine associations between use of NVNM DS, RA pharmaceuticals, and/or vitamin or mineral (VM) DS., Methods: We developed a survey instrument to capture current and ever use of specific NVNM DS, VM DS, and RA pharmaceuticals, with 696 subjects self-reporting an RA diagnosis recruited online or in clinic for survey participation. Analyses were limited to 611 subjects reporting RA diagnosis after age 18 y and treatment with specific RA pharmaceuticals., Results: Most participants reported DS use, with current usage prevalence 49.6% (n = 303), 83.5% (n = 510), or 87.6% (n = 535) for NVNM, VM, or any DS, respectively. While not having appeared in previous RA surveys, turmeric and ginger were among the top 3 NVNM DS in current use, along with fish oil/ω-3 (n-3) PUFA. Concurrent NVNM DS use was reported by 48.2% (n = 243) of participants currently using RA pharmaceuticals (n = 504) and was more common in those using disease-modifying antirheumatic drugs only (no biologics). Most methotrexate users (83%) reported concurrent folate supplementation, with one-third also using turmeric, which is notable because methotrexate and turmeric have been associated with hepatotoxicity., Conclusion: Individuals with RA commonly use NVNM DS in combination with RA pharmaceuticals, including a previously undocumented but popular use of turmeric or ginger supplements with an unclear risk/benefit ratio., (Copyright © The Author(s) on behalf of the American Society for Nutrition 2020.)
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- 2020
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23. Use of Recombinant Human Parathyroid Hormone to Treat Hungry Bone Syndrome in Hemodialysis Patient.
- Author
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Ahmed C, Kendi F, Gebran N, Barcebal C, Dahmani K, El Houni A, and Budruddin M
- Abstract
We report the case of a 35-year-old female with end-stage renal disease on hemodialysis for nine years. She was diagnosed with secondary hyperparathyroidism complicated with a brown tumor in the mandible. After medical therapy failed, she underwent total parathyroidectomy (PTX), which was complicated by severe and prolonged hypocalcemia (hungry bone syndrome). Post-surgery, she required prolonged and frequent intravenous calcium and a high dose of vitamin D resulting in frequent admission with symptomatic hypocalcemia. Her serum magnesium was noted to be in the normal range. She continued to be hypocalcemic for nearly eight months post-surgery despite the intensive treatment. Recombinant human parathyroid hormone (teriparatide) 20 mg daily resulted in normalization of calcium within two weeks. The use of parathyroid hormone proved to be an effective treatment approach in this case. Proper pre-operative preparation and subtotal PTX with an adequate dose of vitamin D and calcium supplement may have been a rational option for this case., (The OMJ is Published Bimonthly and Copyrighted 2020 by the OMSB.)
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- 2020
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24. First Successful Large-Scale Introduction of an Enhanced Recovery after Bariatric Surgery (ERABS) Program in the Middle East: The Results and Lessons Learned of Tawam Hospital/Johns Hopkins, a Tertiary Governmental Center in the UAE.
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Mannaerts GHH, Allatif REA, Al Hashmi FY, Bhosale A, Hammo AN, Isied SH, Qureshi WA, Al Hamad OS, Kayyal Y, and Al Afari HST
- Subjects
- Adult, Bariatric Surgery adverse effects, Bariatric Surgery economics, Bariatric Surgery methods, Cost-Benefit Analysis, Economics, Hospital, Female, Hospitals statistics & numerical data, Humans, Laparoscopy adverse effects, Laparoscopy economics, Laparoscopy methods, Laparoscopy rehabilitation, Male, Middle Aged, Middle East epidemiology, Obesity, Morbid economics, Obesity, Morbid epidemiology, Obesity, Morbid rehabilitation, Postoperative Care economics, Postoperative Care statistics & numerical data, Postoperative Complications economics, Postoperative Complications epidemiology, Program Evaluation, Reoperation economics, Reoperation statistics & numerical data, Retrospective Studies, Sample Size, Bariatric Surgery rehabilitation, Enhanced Recovery After Surgery standards, Obesity, Morbid surgery, Postoperative Care methods
- Abstract
Background: Although enhanced recovery after bariatric surgery (ERABS) has proven to be safe and cost-effective, this concept is relatively new in the Middle East., Methods: A retrospective analysis of consecutive registered cohorts of patients who underwent primary and purely laparoscopic sleeve gastrectomy (LSG) or laparoscopic Roux-en-Y gastric bypass (LRYGB) were compared before introduction of ERABS (2010-2014) and after ERABS (2015-2017) at Tawam Hospital/Johns Hopkins, the UAE., Results: A total of 462 eligible bariatric patients (LSG 414 and LRYGB 48) were operated on before and 1602 (LSG 1436 and LRYGB 166) after introduction of the ERABS. Significant improvements of mean patient time of the patient being within the OR for LSG (from 2:27 to 1:23 min, p = 0.000) and LRYGB (from 3:17 to 1:59 min, p = 0.000) were achieved when comparing pre-ERABS with after introduction of ERABS. Furthermore, there was a significant decrease in LOS in both LSG (from 3.2 to 1.5 days, p = 0.000) and in LRYGB (from 3.5 to 1.7 days, p = 0.000). Major (CD classification III-IV) complications decreased significantly in LSG (from 13.8 to 0.8%, p = 0.000) and were similar in LRYGB (from 4.2% to 3.0%, p = NS). The readmission rate for LSG (from 2.9 to 2.6%, p = NS) or LRYGB (from 0 to 4.8%, p = NS) and the reoperation rates after LSG (from 0.7 to 0.5%, p = NS) and LRYGB (from 0 to 2.4%, p = NS) did not differ between both groups following introduction of ERABS., Conclusions: Implementation of a standardized ERABS program in the Middle East is feasible and safe and leads to reduced LOS and OR times.
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- 2019
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25. Resuscitative endovascular balloon occlusion of the aorta (REBOA): indications: advantages and challenges of implementation in traumatic non-compressible torso hemorrhage.
- Author
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Bekdache O, Paradis T, Shen YBH, Elbahrawy A, Grushka J, Deckelbaum D, Khwaja K, Fata P, Razek T, and Beckett A
- Abstract
Background: Resuscitative endovascular balloon occlusion of the aorta (REBOA) is regaining popularity in the treatment of traumatic non-compressible torso bleeding. Advances in invasive radiology coupled with new damage control measures assisted in the refinement of the technique with promising outcomes. The literature continues to have substantial heterogeneity about REBOA indications, applications, and the challenges confronted when implementing the technique in a level I trauma center. Scoping reviews are excellent platforms to assess the diverse literature of a new technique. It is for the first time that a scoping review is adopted for this topic. Advances in invasive radiology coupled with new damage control measures assisted in the refinement of the technique with promising outcomes. The literature continues to have substantial heterogeneity about REBOA indications, applications, and the challenges confronted when implementing the technique in a level I trauma center. Scoping reviews are excellent platforms to assess the diverse literature of a new technique. It is for the first time that a scoping review is adopted for this topic., Methods: Critical search from MEDLINE, EMBASE, BIOSIS, COCHRANE CENTRAL, PUBMED and SCOPUS were conducted from the earliest available dates until March 2018. Evidence-based articles, as well as gray literature at large, were analyzed regardless of the quality of articles., Results: We identified 1176 articles related to the topic from all available database sources and 57 reviews from the gray literature search. The final review yielded 105 articles. Quantitative and qualitative variables included patient demographics, study design, study objectives, methods of data collection, indications, REBOA protocol used, time to deployment, zone of deployment, occlusion time, complications, outcome, and the level of expertise at the concerned trauma center., Conclusion: Growing levels of evidence support the use of REBOA in selected indications. Our data analysis showed an advantage for its use in terms of morbidities and physiologic derangement in comparison to other resuscitation measures. Current challenges remain in the selective application, implementation, competency assessment, and credentialing for the use of REBOA in trauma settings. The identification of the proper indication, terms of use, and possible advantage of the prehospital and partial REBOA are topics for further research., Level of Evidence: Level III., Competing Interests: Competing interests: None declared.
- Published
- 2019
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26. M-AAA-nsplaining: Gender bias in questions asked at the American Anthropological Association's Annual Meetings.
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Winking J, Hopkins AL, Yeoman M, and Arcak C
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- Female, Humans, Logistic Models, Male, Probability, Anthropology, Congresses as Topic, Sexism, Societies, Scientific, Surveys and Questionnaires
- Abstract
A large body of research has revealed the challenges that disproportionately affect women as they climb the academic ladder. One area that has received relatively little attention is women's experiences at academic conferences, which are often integral to academics' professional development. As conferences are attended by professional colleagues and influential players in specific fields, the professional consequences of any gender bias in criticism are likely to be amplified at such venues. Here, we explore the degree to which the likelihood of audience members asking a question and offering criticism is associated with the gender of a presenter. Audience questions were tabulated during the authors' visits to the three American Anthropological Association Annual Meetings. The results suggested that men were indeed marginally more likely to ask a question, both when considering all types of questions and when considering only critical questions. However, there was no evidence that they differentially targeted women for these questions. Future research might explore what motivates assertive and critical speech in men and women and how their experiences in receiving it might differ, particularly in academic settings in which critical speech might be considered more acceptable., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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27. Surveying GPCR solubilisation conditions using surface plasmon resonance.
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Navratilova IH, Aristotelous T, Bird LE, and Hopkins AL
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- Humans, Solubility, Antibodies, Monoclonal chemistry, Receptors, CCR5 analysis, Receptors, CXCR4 analysis, Surface Plasmon Resonance methods
- Abstract
Biophysical screening techniques, such as surface plasmon resonance, enable detailed kinetic analysis of ligands binding to solubilised G-protein coupled receptors. The activity of a receptor solubilised out of the membrane is crucially dependent on the environment in which it is suspended. Finding the right conditions is challenging due to the number of variables to investigate in order to determine the optimum solubilisation buffer for any given receptor. In this study we used surface plasmon resonance technology to screen a variety of solubilisation conditions including buffers and detergents for two model receptors: CXCR4 and CCR5. We tested 950 different combinations of solubilisation conditions for both receptors. The activity of both receptors was monitored by using conformation dependent monoclonal antibodies and the binding of small molecule ligands. Despite both receptors belonging to the chemokine receptor family they show some differences in their preference for solubilisation conditions that provide the highest level of binding for both the conformation dependent antibodies and small molecules. The study described here is focused not only on finding the best solubilisation conditions for each receptor, but also on factors that determine the sensitivity of the assay for each receptor. We also suggest how these data about different buffers and detergents can be used as a guide for selecting solubilisation conditions for other membrane proteins., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
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28. Healthy foods prepared at home: Diet and support as protective strategies during pregnancy for Hispanic women.
- Author
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Hopkins AL, Yeoman M, and Ritenbaugh C
- Subjects
- Adolescent, Adult, Aged, Arizona, Cooking, Emigration and Immigration, Female, Humans, Middle Aged, Nutritive Value, Pregnancy, Protective Factors, Qualitative Research, Social Class, Urban Population, Young Adult, Acculturation, Diet, Emigrants and Immigrants, Hispanic or Latino, Mothers, Pregnancy Outcome, Social Support
- Abstract
Birth outcomes tend to be better among Hispanics than among other ethnic groups, even when matched for poverty and education, and foreign-born Latinas compared to their US-born counterparts. These patterns suggest that sociocultural factors exhibited by recent immigrants have the potential to protect birth outcomes against the instability of minority and low socioeconomic status. To discover potential sociocultural factors, a pilot qualitative study was carried out in Tucson, Arizona, with 18 Hispanic mothers. The two most prevalent factors reported were (1) a healthy diet prepared at home from minimally processed ingredients, and (2) constant and comprehensive social support. When comparing responses related to diet by interview language preference, a proxy for acculturation, there was very little difference between participants who interviewed in Spanish and those who interviewed in English. This result may be explained by greater maternal social support and higher education levels among those who interviewed in English.
- Published
- 2018
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29. Paradoxical leanness in the imprinting-centre deletion mouse model for Prader-Willi syndrome.
- Author
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Golding DM, Rees DJ, Davies JR, Relkovic D, Furby HV, Guschina IA, Hopkins AL, Davies JS, Resnick JL, Isles AR, and Wells T
- Subjects
- Adipose Tissue, Brown metabolism, Animals, DNA Methylation, Disease Models, Animal, Male, Mice, Sequence Deletion, Thermogenesis physiology, Adipose Tissue, White metabolism, Body Weight physiology, Mutation, Phenotype, Prader-Willi Syndrome genetics, Thinness genetics
- Abstract
Prader-Willi syndrome (PWS), a neurodevelopmental disorder caused by loss of paternal gene expression from 15q11-q13, is characterised by growth retardation, hyperphagia and obesity. However, as single gene mutation mouse models for this condition display an incomplete spectrum of the PWS phenotype, we have characterised the metabolic impairment in a mouse model for 'full' PWS, in which deletion of the imprinting centre (IC) abolishes paternal gene expression from the entire PWS cluster. We show that PWS-IC
del mice displayed postnatal growth retardation, with reduced body weight, hyperghrelinaemia and marked abdominal leanness; proportionate retroperitoneal, epididymal/omental and inguinal white adipose tissue (WAT) weights being reduced by 82%, 84% and 67%, respectively. PWS-ICdel mice also displayed a 48% reduction in proportionate interscapular brown adipose tissue (isBAT) weight with significant 'beiging' of abdominal WAT, and a 2°C increase in interscapular surface body temperature. Maintenance of PWS-ICdel mice under thermoneutral conditions (30°C) suppressed the thermogenic activity in PWS-ICdel males, but failed to elevate the abdominal WAT weight, possibly due to a normalisation of caloric intake. Interestingly, PWS-ICdel mice also showed exaggerated food hoarding behaviour with standard and high-fat diets, but despite becoming hyperphagic when switched to a high-fat diet, PWS-ICdel mice failed to gain weight. This evidence indicates that, unlike humans with PWS, loss of paternal gene expression from the PWS cluster in mice results in abdominal leanness. Although reduced subcutaneous insulation may lead to exaggerated heat loss and thermogenesis, abdominal leanness is likely to arise from a reduced lipid storage capacity rather than increased energy utilisation in BAT., (© 2017 The authors.)- Published
- 2017
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30. Multi-Center Retrospective Evaluation of Screw and Polymethylmethacrylate Constructs for Atlantoaxial Fixation in Dogs.
- Author
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Stout Steele MW, Hodshon AW, Hopkins AL, Tracy GM, Cohen ND, Kerwin SC, Boudreau CE, Thomas WB, Mankin JM, and Levine JM
- Subjects
- Animals, Bone Screws adverse effects, Female, Joint Dislocations congenital, Joint Dislocations surgery, Male, Retrospective Studies, Treatment Outcome, Atlanto-Axial Joint surgery, Bone Screws veterinary, Dogs injuries, Joint Dislocations veterinary, Polymethyl Methacrylate, Surgery, Veterinary methods
- Abstract
Objective: To evaluate outcome and adverse events following ventral stabilization of the atlantoaxial (AA) joint in dogs with clinical AA subluxation using screw/polymethymethacrylate (PMMA) constructs in a retrospective, multi-center cohort study., Study Design: Historical cohort study., Animals: 35 client-owned dogs., Methods: Medical records from 3 institutions were reviewed to identify dogs with AA subluxation treated with ventral screw and PMMA constructs. Data on signalment, pre- and postoperative neurologic status, imaging performed, and adverse events were retrieved. Neurologic examination data were abstracted to generate a modified Frankel score at admission, discharge, and re-examination. Telephone interview of owners >180 days postoperative was conducted., Results: Thirty-five dogs with AA subluxation treated with ventral screw/PMMA constructs were included. Most dogs were young (median age 1 year), small breed dogs with acute onset of neurologic signs (median duration 22.5 hours). Most dogs were non-ambulatory at the time of admission (median modified Frankel score 3). Adverse events were identified in 15/35 dogs including 9 dogs with major adverse events. Four dogs required a second surgery due to vertebral canal violation (n = 2) or implant failure (n = 2). Re-examination at 4-6 weeks postoperative reported 15/28 dogs with improved neurologic status and 19/28 dogs were ambulatory. Telephone follow-up was available for 23/35 dogs with 23/23 reported as ambulatory (median follow-up 390 days)., Conclusions: Ventral application of screw and PMMA constructs for AA subluxation, as described here, is associated with clinical improvement in the majority of dog. Major adverse events are infrequent and the technique is considered relatively safe., (© Copyright 2016 by The American College of Veterinary Surgeons.)
- Published
- 2016
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31. Discovery of New Bromodomain Scaffolds by Biosensor Fragment Screening.
- Author
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Navratilova I, Aristotelous T, Picaud S, Chaikuad A, Knapp S, Filappakopoulos P, and Hopkins AL
- Abstract
The discovery of novel bromodomain inhibitors by fragment screening is complicated by the presence of dimethyl sulfoxide (DMSO), an acetyl-lysine mimetic, that can compromise the detection of low affinity fragments. We demonstrate surface plasmon resonance as a primary fragment screening approach for the discovery of novel bromodomain scaffolds, by describing a protocol to overcome the DMSO interference issue. We describe the discovery of several novel small molecules scaffolds that inhibit the bromodomains PCAF, BRD4, and CREBBP, representing canonical members of three out of the seven subfamilies of bromodomains. High-resolution crystal structures of the complexes of key fragments binding to BRD4(1), CREBBP, and PCAF were determined to provide binding mode data to aid the development of potent and selective inhibitors of PCAF, CREBBP, and BRD4.
- Published
- 2016
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32. Analysis and natural history of pituitary incidentalomas.
- Author
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Imran SA, Yip CE, Papneja N, Aldahmani K, Mohammad S, Imran F, Zwicker DA, Theriault C, Thompson K, Clarke DB, and Van Uum S
- Subjects
- Adenoma epidemiology, Adenoma surgery, Adult, Aged, Female, Humans, Male, Middle Aged, Pituitary Neoplasms epidemiology, Pituitary Neoplasms surgery, Prevalence, Registries, Retrospective Studies, Treatment Outcome, Adenoma diagnostic imaging, Incidental Findings, Pituitary Neoplasms diagnostic imaging
- Abstract
Objectives: Pituitary incidentalomas (PI) are frequently found on brain imaging. Despite their high prevalence, little is known about their long-term natural history and there are limited guidelines on how to monitor them., Methods: We conducted a retrospective study to compare epidemiological characteristics at presentation and the natural history of PI in population-based vs referral-based registries from two tertiary-care referral centers in Canada., Results: A total of 328 patients with PI were included, of whom 73% had pituitary adenomas (PA) and 27% had non-pituitary sellar masses. The commonest indications for imaging were headache (28%), dizziness (12%) and stroke/transient ischemic attack (TIA) (9%). There was a slight female preponderance (52%) with a median age of 55 years at diagnosis; 71% presented as macroadenomas (>10mm). Of PA, 25% were functioning tumors and at presentation 36% of patients had evidence of secondary hormonal deficiency (SHD). Of the total cohort, 68% were treated medically or conservatively whereas 32% required surgery. Most tumors (87% in non-surgery and 68% in post-surgery group) remained stable during follow-up. Similarly, 84% of patients in the non-surgery and 73% in the surgery group did not develop additional SHD during follow-up. The diagnosis of non-functioning adenoma was a risk factor for tumor enlargement and a change in SHD status was associated with a change in tumor size., Conclusions: Our data suggest that most PI seen in tertiary-care referral centers present as macroadenomas and may frequently be functional, often requiring medical or surgical intervention., (© 2016 European Society of Endocrinology.)
- Published
- 2016
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33. Sellar Masses: An Epidemiological Study.
- Author
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Al-Dahmani K, Mohammad S, Imran F, Theriault C, Doucette S, Zwicker D, Yip CE, Clarke DB, and Imran SA
- Subjects
- Adult, Female, Humans, Incidence, Male, Middle Aged, Nova Scotia epidemiology, Prevalence, Registries, Pituitary Neoplasms epidemiology
- Abstract
Background: Sellar masses (SM) are mostly benign growths of pituitary or nonpituitary origin that are increasingly encountered in clinical practice. To date, no comprehensive population-based study has reported the epidemiology of SM from North America., Aim: To determine the epidemiology of SM in the province of Nova Scotia, Canada., Methods: Data from all pituitary-related referrals within the province were prospectively collected in interlinked computerized registries starting in November 2005. We conducted a retrospective analysis on all patients with SM seen within the province between November 2005 and December 2013., Results: A total of 1107 patients were identified, of which 1005 were alive and residing within the province. The mean age at presentation was 44.6±18 years, with an overall female preponderance (62%) and a population prevalence rate of 0.1%. Of patients with SM, 837 (83%) had pituitary adenomas and 168 (17%) had nonpituitary lesions. The relative prevalence and standardized incidence ratio, respectively, of various SM were: nonfunctioning adenomas (38.4%; 2.34), prolactinomas (34.3%; 2.22), Rathke's cyst (6.5%; 0.5), growth hormone-secreting adenomas (6.5%; 0.3), craniopharyngiomas (4.5%; 0.2), adrenocorticotropic hormone-secreting adenomas (3.8%; 0.2), meningiomas (1.9%), and others (3.9%; 0.21). At presentation, 526 (52.3%) had masses ≥1 cm, 318 (31.6%) at <1 cm, and 11 (1.1%) had functioning pituitary adenomas without discernible tumor, whereas tumor size data were unavailable in 150 (14.9%) patients. The specific pathologies and their most common presenting features were: nonfunctioning adenoma (incidental, headaches, and vision loss), prolactinomas (galactorrhea, menstrual irregularity, and headache), growth hormone-secreting adenomas (enlarging extremities and sweating), adrenocorticotropic hormone-secreting adenoma (easy bruising, muscle wasting, and weight gain) and nonpituitary lesions (incidental, headaches, and vision problems). Secondary hormonal deficiencies were common, ranging from 19.6% to 65.7%; secondary hypogonadism, hypothyroidism, and growth hormone deficiencies constituted the majority of these abnormalities., Conclusions: This is the largest North American study to date to assess the epidemiology of SM in a large stable population. Given their significant prevalence in the general population, more studies are needed to evaluate the natural history of these masses and to help allocate appropriate resources for their management.
- Published
- 2016
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- View/download PDF
34. It's Complicated: Negotiating Between Traditional Research and Community-Based Participatory Research in a Translational Study.
- Author
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Hopkins AL, Moore-Monroy M, Wilkinson-Lee AM, Nuño VL, Armenta A, Lopez E, Vanzzini S, and Garcia FA
- Subjects
- Adult, Aged, Arizona, Community Health Workers, Community-Institutional Relations, Cross-Over Studies, Depression ethnology, Evidence-Based Medicine, Female, Humans, Middle Aged, Negotiating, Practice Guidelines as Topic, Research Design, Sexually Transmitted Diseases ethnology, Community-Based Participatory Research, Depression prevention & control, Hispanic or Latino, Sexually Transmitted Diseases prevention & control, Translational Research, Biomedical
- Abstract
Background: The Interactive Systems Framework (ISF), a guide for translational research, encourages the balancing of traditional research and community-based participatory research (CBPR) approaches., Objectives: This paper focuses on the challenges, solutions, and lessons learned in applying the ISF to our translational research project., Methods: A community-campus partnership translated evidence-based screening guidelines on sexually transmitted infections (STIs) and depression into culturally relevant educational materials. Community health workers (CHWs) disseminated the information through a cross-over design to Hispanic women in Pima County, Arizona. Challenges, solutions, and lessons learned were identified throughout this process., Lessons Learned: We identified challenges in the areas of research design, and in the ISF systems of prevention synthesis and translation, prevention support, and prevention delivery. We successfully negotiate solutions between the scientific and local community that resulted in acceptable compromises for both groups., Conclusions: The model presented by the ISF is difficult to achieve, but we offer concrete solutions to community members and scientists to move toward that ideal.
- Published
- 2016
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35. Frameless stereotactic radiosurgery for the treatment of primary intracranial tumours in dogs.
- Author
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Mariani CL, Schubert TA, House RA, Wong MA, Hopkins AL, Barnes Heller HL, Milner RJ, Lester NV, Lurie DM, Rajon DA, Friedman WA, and Bova FJ
- Subjects
- Animals, Brain Neoplasms mortality, Brain Neoplasms surgery, Cranial Nerve Neoplasms mortality, Cranial Nerve Neoplasms surgery, Cranial Nerve Neoplasms veterinary, Dog Diseases mortality, Dogs, Female, Male, Meningioma mortality, Meningioma surgery, Meningioma veterinary, Pituitary Neoplasms mortality, Pituitary Neoplasms surgery, Pituitary Neoplasms veterinary, Radiosurgery methods, Retrospective Studies, Survival Analysis, Trigeminal Nerve Diseases mortality, Trigeminal Nerve Diseases surgery, Trigeminal Nerve Diseases veterinary, Brain Neoplasms veterinary, Dog Diseases surgery, Radiosurgery veterinary
- Abstract
Stereotactic radiosurgery (SRS) is a procedure that delivers a single large radiation dose to a well-defined target. Here, we describe a frameless SRS technique suitable for intracranial targets in canines. Medical records of dogs diagnosed with a primary intracranial tumour by imaging or histopathology that underwent SRS were retrospectively reviewed. Frameless SRS was used successfully to treat tumours in 51 dogs with a variety of head sizes and shapes. Tumours diagnosed included 38 meningiomas, 4 pituitary tumours, 4 trigeminal nerve tumours, 3 gliomas, 1 histiocytic sarcoma and 1 choroid plexus tumour. Median survival time was 399 days for all tumours and for dogs with meningiomas; cause-specific survival was 493 days for both cohorts. Acute grade III central nervous system toxicity (altered mentation) occurred in two dogs. Frameless SRS resulted in survival times comparable to conventional radiation therapy, but with fewer acute adverse effects and only a single anaesthetic episode required for therapy., (© 2013 John Wiley & Sons Ltd.)
- Published
- 2015
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36. Application of RNAi to Genomic Drug Target Validation in Schistosomes.
- Author
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Guidi A, Mansour NR, Paveley RA, Carruthers IM, Besnard J, Hopkins AL, Gilbert IH, and Bickle QD
- Subjects
- Animals, Calmodulin antagonists & inhibitors, Cell Cycle Proteins antagonists & inhibitors, Cell Cycle Proteins genetics, Drug Discovery, Erythrocytes physiology, Genomics, Humans, Male, Praziquantel pharmacology, Protein Kinase C beta genetics, Protein Serine-Threonine Kinases antagonists & inhibitors, Protein Serine-Threonine Kinases genetics, Proto-Oncogene Proteins antagonists & inhibitors, Proto-Oncogene Proteins genetics, Schistosoma mansoni genetics, p38 Mitogen-Activated Protein Kinases antagonists & inhibitors, p38 Mitogen-Activated Protein Kinases genetics, Polo-Like Kinase 1, RNA Interference, Schistosoma mansoni drug effects
- Abstract
Concerns over the possibility of resistance developing to praziquantel (PZQ), has stimulated efforts to develop new drugs for schistosomiasis. In addition to the development of improved whole organism screens, the success of RNA interference (RNAi) in schistosomes offers great promise for the identification of potential drug targets to initiate drug discovery. In this study we set out to contribute to RNAi based validation of putative drug targets. Initially a list of 24 target candidates was compiled based on the identification of putative essential genes in schistosomes orthologous of C. elegans essential genes. Knockdown of Calmodulin (Smp_026560.2) (Sm-Calm), that topped this list, produced a phenotype characterised by waves of contraction in adult worms but no phenotype in schistosomula. Knockdown of the atypical Protein Kinase C (Smp_096310) (Sm-aPKC) resulted in loss of viability in both schistosomula and adults and led us to focus our attention on other kinase genes that were identified in the above list and through whole organism screening of known kinase inhibitor sets followed by chemogenomic evaluation. RNAi knockdown of these kinase genes failed to affect adult worm viability but, like Sm-aPKC, knockdown of Polo-like kinase 1, Sm-PLK1 (Smp_009600) and p38-MAPK, Sm-MAPK p38 (Smp_133020) resulted in an increased mortality of schistosomula after 2-3 weeks, an effect more marked in the presence of human red blood cells (hRBC). For Sm-PLK-1 the same effects were seen with the specific inhibitor, BI2536, which also affected viable egg production in adult worms. For Sm-PLK-1 and Sm-aPKC the in vitro effects were reflected in lower recoveries in vivo. We conclude that the use of RNAi combined with culture with hRBC is a reliable method for evaluating genes important for larval development. However, in view of the slow manifestation of the effects of Sm-aPKC knockdown in adults and the lack of effects of Sm-PLK-1 and Sm-MAPK p38 on adult viability, these kinases may not represent suitable drug targets.
- Published
- 2015
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37. Herbal remedy knowledge acquisition and transmission among the Yucatec Maya in Tabi, Mexico: a cross-sectional study.
- Author
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Hopkins AL, Stepp JR, McCarty C, and Gordon JS
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Cross-Sectional Studies, Female, Health Knowledge, Attitudes, Practice ethnology, Humans, Indians, North American psychology, Male, Mexico, Middle Aged, Young Adult, Herbal Medicine methods, Indians, North American ethnology, Medicine, Traditional methods
- Abstract
Background: Ethnobotanical knowledge continues to be important for treating illness in many rural communities, despite access to health care clinics and pharmaceuticals. However, access to health care clinics and other modern services can have an impact on the distribution of medical ethnobotanical knowledge. Many factors have been shown to be associated with distributions in this type of knowledge. The goal of the sub-analyses reported in this paper was to better understand the relationship between herbal remedy knowledge, and two such factors, age and social network position, among the Yucatec Maya in Tabi, Yucatan., Methods: The sample consisted of 116 Yucatec Maya adults. Cultural consensus analysis was used to measure variation in herbal remedy knowledge using competence scores, which is a measure of participant agreement within a domain. Social network analysis was used to measure individual position within a network using in-degree scores, based on the number of people who asked an individual about herbal remedies. Surveys were used to capture relevant personal attributes, including age., Results: Analysis revealed a significant positive correlation between age and the herbal medicine competence score for individuals 45 and under, and no relationship for individuals over 45. There was an insignificant relationship between in-degree and competence scores for individuals 50 and under and a significant positive correlation for those over 50., Conclusions: There are two possible mechanisms that could account for the differences between cohorts: 1) knowledge accumulation over time; and/or 2) the stunting of knowledge acquisition through delayed acquisition, competing treatment options, and changes in values. Primary ethnographic evidence suggests that both mechanisms may be at play in Tabi. Future studies using longitudinal or cross-site comparisons are necessary to determine the whether and how the second mechanism is influencing the different cohorts.
- Published
- 2015
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- View/download PDF
38. The Joint European Compound Library: boosting precompetitive research.
- Author
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Besnard J, Jones PS, Hopkins AL, and Pannifer AD
- Subjects
- Biomedical Research, Drug Industry, Europe, High-Throughput Screening Assays, Drug Discovery, Small Molecule Libraries
- Abstract
The Joint European Compound Library (JECL) is a new high-throughput screening collection aimed at driving precompetitive drug discovery and target validation. The JECL has been established with a core of over 321,000 compounds from the proprietary collections of seven pharmaceutical companies and will expand to around 500,000 compounds. Here, we analyse the physicochemical profile and chemical diversity of the core collection, showing that the collection is diverse and has a broad spectrum of predicted biological activity. We also describe a model for sharing compound information from multiple proprietary collections, enabling diversity and quality analysis without disclosing structures. The JECL is available for screening at no cost to European academic laboratories and SMEs through the IMI European Lead Factory (http://www.europeanleadfactory.eu/)., (Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
39. Surface plasmon resonance analysis of seven-transmembrane receptors.
- Author
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Aristotelous T, Hopkins AL, and Navratilova I
- Subjects
- Allosteric Regulation drug effects, Animals, Equipment Design, Humans, Models, Molecular, Receptors, G-Protein-Coupled chemistry, Surface Plasmon Resonance instrumentation, Drug Discovery methods, Receptors, G-Protein-Coupled metabolism, Surface Plasmon Resonance methods
- Abstract
G-protein coupled receptors (GPCRs) are the primary target class of currently marketed drugs, accounting for around a third of all drug targets of approved medicines. However, almost all the screening efforts for novel ligand discovery rely exclusively on cellular systems overexpressing the receptors. Current receptor assay systems are based on measurement of either ligand displacement or downstream functional responses, rather than direct observation of ligand binding. Issues of allosteric modulation, probe dependence, and functional selectivity create challenges in selecting suitable assay formats. Therefore, a method that directly measures GPCR-ligand interactions, independent of binding site, probe, and signaling pathway would be a useful primary and orthogonal screening method. An alternative ligand discovery strategy would be the direct measurement of GPCR-ligand interactions by label-free technologies, such as surface plasmon resonance (SPR). In this chapter, we summarize overview of the SPR technology and development of applications for detection of ligand binding to GPCRs using wild-type and thermostabilized receptors. We discuss the utilization of SPR as a biophysical screening method for fragment-based drug discovery for GPCRs. In particular, we show how SPR screening can detect both orthosteric and allosteric ligands with the appropriate experimental design., (© 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
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40. Fragment screening by SPR and advanced application to GPCRs.
- Author
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Shepherd CA, Hopkins AL, and Navratilova I
- Subjects
- Animals, Humans, Protein Stability, Drug Evaluation, Preclinical methods, Receptors, G-Protein-Coupled chemistry, Receptors, G-Protein-Coupled metabolism, Surface Plasmon Resonance methods
- Abstract
Surface plasmon resonance (SPR) is one of the primary biophysical methods for the screening of low molecular weight 'fragment' libraries, due to its low protein consumption and 'label-free' methodology. SPR biosensor interaction analysis is employed to both screen and confirm the binding of compounds in fragment screening experiments, as it provides accurate information on the affinity and kinetics of molecular interactions. The most advanced application of the use of SPR for fragment screening is against membrane protein drug targets, such G-protein coupled receptors (GPCRs). Biophysical GPCR assays using SPR have been validated with pharmacological measurements approximate to cell-based methods, yet provide the advantage of biophysical methods in their ability to measure the weak affinities of low molecular weight fragments. A number of SPR fragment screens against GPCRs have now been disclosed in the literature. SPR fragment screening is proving versatile to screen both thermostabilised GPCRs and solubilised wild type receptors. In this chapter, we discuss the state-of-the-art in GPCR fragment screening by SPR and the technical considerations in performing such experiments., (Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2014
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41. Modes of hoping: understanding hope and expectation in the context of a clinical trial of complementary and alternative medicine for chronic pain.
- Author
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Eaves ER, Ritenbaugh C, Nichter M, Hopkins AL, and Sherman KJ
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Comprehension, Female, Humans, Interviews as Topic, Male, Middle Aged, Qualitative Research, Treatment Outcome, Young Adult, Anticipation, Psychological, Chronic Pain therapy, Facial Pain therapy, Hope, Medicine, Chinese Traditional psychology, Temporomandibular Joint Disorders therapy
- Abstract
This article explores the role of hope in participants' assessments of their expectations, experiences and treatment outcomes. Data analysis focused on semi-structured, open-ended interviews with 44 participants, interviewed 3-5 times each over the course of a study evaluating Traditional Chinese Medicine (TCM) for temporomandibular disorders (TMD), a form of chronic orofacial pain. Transcripts were coded and analyzed using qualitative and ethnographic methods. A "Modes of Hoping" (Webb, 2007)(1) framework informed our analysis. Five modes of hoping emerged from participant narratives: Realistic Hope, Wishful Hope, Utopian Hope, Technoscience Hope, and Transcendent Hope. Using this framework, hope is demonstrated as exerting a profound influence over how participants assess and report their expectations. This suggests that researchers interested in measuring expectations and understanding their role in treatment outcomes should consider hope as exercising a multi-faceted and dynamic influence on participants' reporting of expectations and their experience and evaluation of treatment., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2014
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42. Validity of ligand efficiency metrics.
- Author
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Murray CW, Erlanson DA, Hopkins AL, Keserü GM, Leeson PD, Rees DC, Reynolds CH, and Richmond NJ
- Abstract
A recent viewpoint article (Improving the plausibility of success with inefficient metrics. ACS Med. Chem. Lett. 2014, 5, 2-5) argued that the standard definition of ligand efficiency (LE) is mathematically invalid. In this viewpoint, we address this criticism and show categorically that the definition of LE is mathematically valid. LE and other metrics such as lipophilic ligand efficiency (LLE) can be useful during the multiparameter optimization challenge faced by medicinal chemists.
- Published
- 2014
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43. The role of ligand efficiency metrics in drug discovery.
- Author
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Hopkins AL, Keserü GM, Leeson PD, Rees DC, and Reynolds CH
- Subjects
- Administration, Oral, Chemical Phenomena, Databases, Factual, Humans, Ligands, Molecular Structure, Molecular Weight, Pharmaceutical Preparations administration & dosage, Protein Binding, Small Molecule Libraries administration & dosage, Structure-Activity Relationship, Thermodynamics, Drug Discovery methods, Pharmaceutical Preparations chemistry, Small Molecule Libraries chemistry
- Abstract
The judicious application of ligand or binding efficiency metrics, which quantify the molecular properties required to obtain binding affinity for a drug target, is gaining traction in the selection and optimization of fragments, hits and leads. Retrospective analysis of recently marketed oral drugs shows that they frequently have highly optimized ligand efficiency values for their targets. Optimizing ligand efficiency metrics based on both molecular mass and lipophilicity, when set in the context of the specific target, has the potential to ameliorate the inflation of these properties that has been observed in current medicinal chemistry practice, and to increase the quality of drug candidates.
- Published
- 2014
- Full Text
- View/download PDF
44. A prospective randomized pilot study on intermittent post-dialysis dosing of cinacalcet.
- Author
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Haq N, Chaaban A, Gebran N, Khan I, Abbachi F, Hassan M, Bernsen R, and Abouchacra S
- Subjects
- Adult, Aged, Alkaline Phosphatase blood, Calcium blood, Cinacalcet, Drug Administration Schedule, Female, Humans, Hyperparathyroidism, Secondary blood, Hyperparathyroidism, Secondary etiology, Kidney Failure, Chronic complications, Male, Medication Adherence, Middle Aged, Parathyroid Hormone blood, Phosphorus blood, Pilot Projects, Prospective Studies, Renal Dialysis, Severity of Illness Index, Calcimimetic Agents administration & dosage, Hyperparathyroidism, Secondary drug therapy, Kidney Failure, Chronic therapy, Naphthalenes administration & dosage
- Abstract
Background: Treatment of secondary hyperparathyroidism (SHPT) is important in management of patients with end-stage renal disease on hemodialysis (HD). Calcimimetic agent, cinacalcet provides an option for control of SHPT in patients who fail traditional therapy. It may not have optimal results in non-compliant patients. To enhance compliance, we evaluated effectiveness of post-dialysis dosing of cinacalcet (group AD) as compared to daily home administration (group D) in a prospective randomized trial of HD patients with refractory SHPT., Methods: After 2-week run-in phase, patients were randomly assigned to two treatment groups. In group AD (N = 12), patients were administered cinacalcet on the day of dialysis (3 times/week) by dialysis staff, while in control group D (N = 11), cinacalcet was prescribed daily to be taken by patients at home. Intact parathyroid hormone (i-PTH), serum calcium, phosphorus, and alkaline phosphatase were followed for 16 weeks and compared to baseline in both groups. Data were analyzed using between-groups linear regression for repeated measures., Results: No significant decline in i-PTH occurred in group AD at 16 weeks as compared to a significant drop in group D (p = 0.006). However, subgroup analysis showed effectiveness of post-dialysis dosing in patients with less severe SHPT (p = 0.04)., Conclusion: Although daily dosing overall was more effective for treatment of SHPT, dialysis dosing was effective in patients with less severe SHPT. This warrants a larger study considering the limitations of this pilot trial. In the meantime, dialysis dosing can be considered in non-compliant patients with less severe SHPT.
- Published
- 2014
- Full Text
- View/download PDF
45. Care of terminally-ill patients: an opinion survey among critical care healthcare providers in the Middle East.
- Author
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ur Rahman M, Abuhasna S, and Abu-Zidan FM
- Subjects
- Female, Health Care Surveys, Humans, Male, Middle Aged, Middle East, Surveys and Questionnaires, Attitude of Health Personnel, Critical Care, Decision Making, Health Personnel psychology, Resuscitation Orders, Terminally Ill
- Abstract
Background: Modern medicine has allowed physicians to support the dying terminally-ill patient with artificial means. However, a common dilemma faced by physicians in general, and intensivist in particular is when to limit or withdraw aggressive intervention., Objective: To study the effect of training background and seniority on Do-not to resuscitate (DNR) decisions in the Middle East., Methods: Anonymous questionnaire sent to members of the Pan Arab Society of Critical Care., Results: The response rate was 46.2%. Most of the responders were Muslim (86%) and consultants (70.9%). Majority of the responders were trained in western countries. Religion played a major role in 59.3% for making the DNR decision. DNR was considered equivalent to comfort care by 39.5%. In a futile case scenario, Do Not Escalate Therapy was preferred (54.7%). The likelihood of a patient, once labeled DNR, being clinically neglected was a concern among 46.5%. Admission of DNR patients to the ICU was acceptable for 47.7%. Almost one-half of the responders (46.5%) wanted physicians to have the ultimate authority in the DNR decision. Training background was a significant factor affecting the interpretation of the term no code DNR (P< 0.008)., Conclusion: Training background and level of seniority in critical care provider does not impact opinion on most of end of life issues related to care of terminally-ill patients. However, DNR is considered equivalent to comfort care among majority of Middle Eastern trained physicians.
- Published
- 2013
- Full Text
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46. Discovery of β2 Adrenergic Receptor Ligands Using Biosensor Fragment Screening of Tagged Wild-Type Receptor.
- Author
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Aristotelous T, Ahn S, Shukla AK, Gawron S, Sassano MF, Kahsai AW, Wingler LM, Zhu X, Tripathi-Shukla P, Huang XP, Riley J, Besnard J, Read KD, Roth BL, Gilbert IH, Hopkins AL, Lefkowitz RJ, and Navratilova I
- Abstract
G-protein coupled receptors (GPCRs) are the primary target class of currently marketed drugs, accounting for about a quarter of all drug targets of approved medicines. However, almost all the screening efforts for novel ligand discovery rely exclusively on cellular systems overexpressing the receptors. An alternative ligand discovery strategy is a fragment-based drug discovery, where low molecular weight compounds, known as fragments, are screened as initial starting points for optimization. However, the screening of fragment libraries usually employs biophysical screening methods, and as such, it has not been routinely applied to membrane proteins. We present here a surface plasmon resonance biosensor approach that enables, cell-free, label-free, fragment screening that directly measures fragment interactions with wild-type GPCRs. We exemplify the method by the discovery of novel, selective, high affinity antagonists of human β2 adrenoceptor.
- Published
- 2013
- Full Text
- View/download PDF
47. Hibiscus sabdariffa L. in the treatment of hypertension and hyperlipidemia: a comprehensive review of animal and human studies.
- Author
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Hopkins AL, Lamm MG, Funk JL, and Ritenbaugh C
- Subjects
- Animals, Humans, Randomized Controlled Trials as Topic, Hibiscus, Hyperlipidemias drug therapy, Hypertension drug therapy, Phytotherapy, Plant Extracts therapeutic use
- Abstract
The effectiveness of Hibiscus sabdariffa L. (HS) in the treatment of risk factors associated with cardiovascular disease is assessed in this review by taking a comprehensive approach to interpreting the randomized clinical trial (RCT) results in the context of the available ethnomedical, phytochemical, pharmacological, and safety and toxicity information. HS decoctions and infusions of calyxes, and on occasion leaves, are used in at least 10 countries worldwide in the treatment of hypertension and hyperlipidemia with no reported adverse events or side effects. HS extracts have a low degree of toxicity with a LD50 ranging from 2,000 to over 5,000mg/kg/day. There is no evidence of hepatic or renal toxicity as the result of HS extract consumption, except for possible adverse hepatic effects at high doses. There is evidence that HS acts as a diuretic, however in most cases the extract did not significantly influence electrolyte levels. Animal studies have consistently shown that consumption of HS extract reduces blood pressure in a dose dependent manner. In RCTs, the daily consumption of a tea or extract produced from HS calyxes significantly lowered systolic blood pressure (SBP) and diastolic blood pressure (DBP) in adults with pre to moderate essential hypertension and type 2 diabetes. In addition, HS tea was as effective at lowering blood pressure as the commonly used blood pressure medication Captropril, but less effective than Lisinopril. Total cholesterol, low-density lipoprotein cholesterol (LDL-C), and triglycerides were lowered in the majority of normolipidemic, hyperlipidemic, and diabetic animal models, whereas high-density lipoprotein cholesterol (HDL-C) was generally not affected by the consumption of HS extract. Over half of the RCTs showed that daily consumption of HS tea or extracts had favorable influence on lipid profiles including reduced total cholesterol, LDL-C, triglycerides, as well as increased HDL-C. Anthocyanins found in abundance in HS calyxes are generally considered the phytochemicals responsible for the antihypertensive and hypocholesterolemic effects, however evidence has also been provided for the role of polyphenols and hibiscus acid. A number of potential mechanisms have been proposed to explain the hypotensive and anticholesterol effects, but the most common explanation is the antioxidant effects of the anthocyanins inhibition of LDL-C oxidation, which impedes atherosclerosis, an important cardiovascular risk factor. This comprehensive body of evidence suggests that extracts of HS are promising as a treatment of hypertension and hyperlipidemia, however more high quality animal and human studies informed by actual therapeutic practices are needed to provide recommendations for use that have the potential for widespread public health benefit., (Published by Elsevier B.V.)
- Published
- 2013
- Full Text
- View/download PDF
48. Automated design of ligands to polypharmacological profiles.
- Author
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Besnard J, Ruda GF, Setola V, Abecassis K, Rodriguiz RM, Huang XP, Norval S, Sassano MF, Shin AI, Webster LA, Simeons FR, Stojanovski L, Prat A, Seidah NG, Constam DB, Bickerton GR, Read KD, Wetsel WC, Gilbert IH, Roth BL, and Hopkins AL
- Subjects
- Animals, Automation, Drug Delivery Systems, Female, Male, Mice, Mice, Inbred C57BL, Models, Theoretical, Pharmacological Phenomena, Reproducibility of Results, Drug Design, Ligands
- Abstract
The clinical efficacy and safety of a drug is determined by its activity profile across many proteins in the proteome. However, designing drugs with a specific multi-target profile is both complex and difficult. Therefore methods to design drugs rationally a priori against profiles of several proteins would have immense value in drug discovery. Here we describe a new approach for the automated design of ligands against profiles of multiple drug targets. The method is demonstrated by the evolution of an approved acetylcholinesterase inhibitor drug into brain-penetrable ligands with either specific polypharmacology or exquisite selectivity profiles for G-protein-coupled receptors. Overall, 800 ligand-target predictions of prospectively designed ligands were tested experimentally, of which 75% were confirmed to be correct. We also demonstrate target engagement in vivo. The approach can be a useful source of drug leads when multi-target profiles are required to achieve either selectivity over other drug targets or a desired polypharmacology.
- Published
- 2012
- Full Text
- View/download PDF
49. Quantifying the chemical beauty of drugs.
- Author
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Bickerton GR, Paolini GV, Besnard J, Muresan S, and Hopkins AL
- Subjects
- Empirical Research, Pharmaceutical Preparations chemistry
- Abstract
Drug-likeness is a key consideration when selecting compounds during the early stages of drug discovery. However, evaluation of drug-likeness in absolute terms does not reflect adequately the whole spectrum of compound quality. More worryingly, widely used rules may inadvertently foster undesirable molecular property inflation as they permit the encroachment of rule-compliant compounds towards their boundaries. We propose a measure of drug-likeness based on the concept of desirability called the quantitative estimate of drug-likeness (QED). The empirical rationale of QED reflects the underlying distribution of molecular properties. QED is intuitive, transparent, straightforward to implement in many practical settings and allows compounds to be ranked by their relative merit. We extended the utility of QED by applying it to the problem of molecular target druggability assessment by prioritizing a large set of published bioactive compounds. The measure may also capture the abstract notion of aesthetics in medicinal chemistry.
- Published
- 2012
- Full Text
- View/download PDF
50. Whole organism high-content screening by label-free, image-based Bayesian classification for parasitic diseases.
- Author
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Paveley RA, Mansour NR, Hallyburton I, Bleicher LS, Benn AE, Mikic I, Guidi A, Gilbert IH, Hopkins AL, and Bickle QD
- Subjects
- Animals, Automation, Laboratory methods, Image Processing, Computer-Assisted methods, Larva drug effects, Locomotion drug effects, Time-Lapse Imaging methods, Anthelmintics isolation & purification, Anthelmintics pharmacology, Drug Evaluation, Preclinical methods, High-Throughput Screening Assays methods, Parasitology methods, Schistosoma drug effects
- Abstract
Sole reliance on one drug, Praziquantel, for treatment and control of schistosomiasis raises concerns about development of widespread resistance, prompting renewed interest in the discovery of new anthelmintics. To discover new leads we designed an automated label-free, high content-based, high throughput screen (HTS) to assess drug-induced effects on in vitro cultured larvae (schistosomula) using bright-field imaging. Automatic image analysis and Bayesian prediction models define morphological damage, hit/non-hit prediction and larval phenotype characterization. Motility was also assessed from time-lapse images. In screening a 10,041 compound library the HTS correctly detected 99.8% of the hits scored visually. A proportion of these larval hits were also active in an adult worm ex-vivo screen and are the subject of ongoing studies. The method allows, for the first time, screening of large compound collections against schistosomes and the methods are adaptable to other whole organism and cell-based screening by morphology and motility phenotyping.
- Published
- 2012
- Full Text
- View/download PDF
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