110 results on '"Holtrop G"'
Search Results
2. Statistical modelling of the selectivity of trawl nets
- Author
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Holtrop, G.
- Subjects
639.8 ,Fishing nets - Abstract
This thesis develops statistical methodology for modelling the selectivity of fishing nets, using data from covered codend experiments of fishing trawls. First, the effects of subsampling an experimental catch instead of measuring the entire catch are investigated. Often the subsample is not taken at random. This leads to bias in the selectivity parameter estimates. Simulations show that the effects of non-random subsampling are minimised when equal proportions are sampled from the test and the control net. A model is developed for describing the selectivity of a net with a window panel inserted. This model quantifies the selectivity of both the codend and the window panel, which can then be combined. The model is used to investigate the selectivity of different window panels and their contribution to the combined selectivity. Traditionally, selectivity has been modelled as a fixed and random effects model, estimated in two stages. As an alternative, Markov chain Monte Carlo techniques are explored. A Bayesian selectivity model is formulated, and the effect of the prior distribution on the variance components is investigated. The posterior distribution is relatively insensitive to a prior distribution having variation of similar magnitude as the variation present in the data. For model selection, the p-value approach applied to the posterior marginal densities is more useful than the Bayes and pseudo-Bayes factors. The Bayesian selectivity model is extended to include variation between seasons and variation between trips. The new model is applied to a data set containing seasonal variation. Finally, a Bayeisan multi-species model is developed that accounts for dependencies between species. This gives more precise selectivity parameter estimates. It also reduces bias in the parameter estimates by accounting for mechanisms behind non-random missing data.
- Published
- 1998
3. Is d-methionine bioavailable to the dairy cow?
- Author
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Lapierre, H., Holtrop, G., Calder, A.G., Renaud, J., and Lobley, G.E.
- Published
- 2012
- Full Text
- View/download PDF
4. O201 Mathematical modelling in R of the intestinal microbiota growth
- Author
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Rubio, L.A., primary, Kettle, H., additional, Louis, P., additional, Holtrop, G., additional, Duncan, S.H., additional, and Flint, H.J., additional
- Published
- 2022
- Full Text
- View/download PDF
5. Metabolism of 2-hydroxy-4-(methylthio)butanoate (HMTBA) in lactating dairy cows
- Author
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Lapierre, H., Vázquez-Añón, M., Parker, D., Dubreuil, P., Holtrop, G., and Lobley, G.E.
- Published
- 2011
- Full Text
- View/download PDF
6. Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows
- Author
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Ouellet, D.R., Berthiaume, R., Holtrop, G., Lobley, G.E., Martineau, R., and Lapierre, H.
- Published
- 2010
- Full Text
- View/download PDF
7. Distribution of 15N in Amino Acids During 15N-Leucine Infusion: Impact on the Estimation of Endogenous Flows in Dairy Cows
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Lapierre, H., Ouellet, D.R., Berthiaume, R., Martineau, R., Holtrop, G., and Lobley, G.E.
- Published
- 2008
- Full Text
- View/download PDF
8. A randomized crossover study to assess the effect of an oat-rich diet on glycaemic control, plasma lipids and postprandial glycaemia, inflammation and oxidative stress in Type 2 diabetes
- Author
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McGeoch, S. C., Johnstone, A. M., Lobley, G. E., Adamson, J., Hickson, K., Holtrop, G., Fyfe, C., Clark, L. F., Pearson, D. W. M., Abraham, P., Megson, I. L., and MacRury, S. M.
- Published
- 2013
- Full Text
- View/download PDF
9. INFLUENCE OF DIET ON COLONIC FERMENTATION AND ENDOGENOUS FORMATION OF N-NITROSO COMPOUNDS: O073
- Author
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Gratz, S W., Richardson, A J., Fyfe, C., Johnstone, A M., and Holtrop, G.
- Published
- 2013
10. Absorption and Digestive Tract Metabolism of 2-Hydroxy-4-Methylthiobutanoic Acid in Lambs
- Author
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Lobley, G.E., Wester, T.J., Holtrop, G., Dibner, J.J., Parker, D.S., and Vázquez-Añón, M.
- Published
- 2006
- Full Text
- View/download PDF
11. What is the True Supply of Amino Acids for a Dairy Cow?
- Author
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Lapierre, H., Pacheco, D., Berthiaume, R., Ouellet, D.R., Schwab, C.G., Dubreuil, P., Holtrop, G., and Lobley, G.E.
- Published
- 2006
- Full Text
- View/download PDF
12. Can general anaesthesia be used for the Paralytic Shellfish Poison bioassay?
- Author
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Holtrop, G., Petrie, J., McElhiney, J., and Dennison, N.
- Published
- 2006
- Full Text
- View/download PDF
13. Human colonic microbiota associated with diet, obesity and weight loss
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Duncan, S H, Lobley, G E, Holtrop, G, Ince, J, Johnstone, A M, Louis, P, and Flint, H J
- Published
- 2008
- Full Text
- View/download PDF
14. Pivotal Roles for pH, Lactate, and Lactate-Utilizing Bacteria in the Stability of a Human Colonic Microbial Ecosystem.
- Author
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Cotter, PD, Wang, SP, Rubio, LA, Duncan, SH, Donachie, GE, Holtrop, G, Lo, G, Farquharson, FM, Wagner, J, Parkhill, J, Louis, P, Walker, AW, Flint, HJ, Cotter, PD, Wang, SP, Rubio, LA, Duncan, SH, Donachie, GE, Holtrop, G, Lo, G, Farquharson, FM, Wagner, J, Parkhill, J, Louis, P, Walker, AW, and Flint, HJ
- Abstract
Lactate can be produced by many gut bacteria, but in adults its accumulation in the colon is often an indicator of microbiota perturbation. Using continuous culture anaerobic fermentor systems, we found that lactate concentrations remained low in communities of human colonic bacteria maintained at pH 6.5, even when dl-lactate was infused at 10 or 20 mM. In contrast, lower pH (5.5) led to periodic lactate accumulation following lactate infusion in three fecal microbial communities examined. Lactate accumulation was concomitant with greatly reduced butyrate and propionate production and major shifts in microbiota composition, with Bacteroidetes and anaerobic Firmicutes being replaced by Actinobacteria, lactobacilli, and Proteobacteria Pure-culture experiments confirmed that Bacteroides and Firmicutes isolates were susceptible to growth inhibition by relevant concentrations of lactate and acetate, whereas the lactate-producer Bifidobacterium adolescentis was resistant. To investigate system behavior further, we used a mathematical model (microPop) based on 10 microbial functional groups. By incorporating differential growth inhibition, our model reproduced the chaotic behavior of the system, including the potential for lactate infusion both to promote and to rescue the perturbed system. The modeling revealed that system behavior is critically dependent on the proportion of the community able to convert lactate into butyrate or propionate. Communities with low numbers of lactate-utilizing bacteria are inherently less stable and more prone to lactate-induced perturbations. These findings can help us to understand the consequences of interindividual microbiota variation for dietary responses and microbiota changes associated with disease states.IMPORTANCE Lactate is formed by many species of colonic bacteria, and can accumulate to high levels in the colons of inflammatory bowel disease subjects. Conversely, in healthy colons lactate is metabolized by lactate-utilizing spe
- Published
- 2020
15. Dietary carbohydrate rather than protein intake drives colonic microbial fermentation during weight loss
- Author
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Gratz, S. W., primary, Hazim, S., additional, Richardson, A. J., additional, Scobbie, L., additional, Johnstone, A. M., additional, Fyfe, C., additional, Holtrop, G., additional, Lobley, G. E., additional, and Russell, W. R., additional
- Published
- 2018
- Full Text
- View/download PDF
16. Investigation of mechanisms of protein induced satiety: meal structure and protein content effects on gastric emptying and gut hormone release
- Author
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Groenen, M., primary, Fyfe, C.L., additional, Holtrop, G., additional, Horgan, G.W., additional, Meek, C.L., additional, Gribble, F., additional, Morgan, P., additional, and Johnstone, A.M., additional
- Published
- 2017
- Full Text
- View/download PDF
17. Whole-body and splanchnic amino acid metabolism in sheep during an acute endotoxin challenge
- Author
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McNeil, C. J., primary, Hoskin, S. O., additional, Bremner, D. M., additional, Holtrop, G., additional, and Lobley, G. E., additional
- Published
- 2016
- Full Text
- View/download PDF
18. Study of the effect of presence or absence of protozoa on rumen fermentation and microbial protein contribution to the chyme
- Author
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Belanche, A., Abecia, Leticia, Holtrop, G., Guada, J. A., Castrillo, C., de la Fuente Oliver, Gabriel, and Balcells Terés, Joaquim
- Subjects
Remugants ,Protozous ,Liquid farm manure ,Ruminants ,Purins ,Protozoa - Abstract
The aim of this study was to investigate the effect of presence or absence of protozoa on rumen fermentation and efficiency of microbial protein synthesis under different diets. Of 20 twin paired lambs, 1 lamb of each pair was isolated from the ewe within 24 h after birth and reared in a protozoa-free environment (n = 10), whereas their respective twin-siblings remained with the ewe (faunated, n = 10). When lambs reached 6 mo of age, 5 animals of each group were randomly allocated to 1 of 2 experimental diets consisting of either alfalfa hay as the sole diet, or 50:50 mixed with ground barley grain according to a 2 × 2 factorial arrangement of treatments. After 15 d of adaptation to the diet, the animals were euthanized and total rumen and abomasal contents were sampled to estimate rumen microbial synthesis using C31 alkane as flow marker. Different (15N and purine bases) and a novel (recombinant DNA sequences) microbial markers, combined with several microbial reference extracts (rumen protozoa, liquid and solid associated bacteria) were evaluated. Absence of rumen protozoa modified the rumen fermentation pattern and decreased total tract OM and NDF digestibility in 2.0 and 5.1 percentage points, respectively. The effect of defaunation on microbial N flow was weak, however, and was dependent on the microbial marker and microbial reference extract considered. Faunated lambs fed with mixed diet showed the greatest rumen protozoal concentration and the least efficient microbial protein synthesis (29% less than the other treatments), whereas protozoa-free lambs fed with mixed diet presented the smallest ammonia concentration and 34% greater efficiency of N utilization than the other treatments. Although 15N gave the most precise estimates of microbial synthesis, the use of recombinant DNA sequences represents an alternative that allows separate quantification of the bacteria and protozoa contributions. This marker showed that presence of protozoa decrease the bacterial-N flow through the abomasum by 33%, whereas the protozoa-N contribution to the microbial N flow increased from 1.9 to 14.1% when barley grain was added to the alfalfa hay. Absolute data related to intestinal flow must be treated with caution because the limitations of the sampling and maker system employed. This work was supported by CICYT project AGL 2004-02910/GAN and an FPU grant awarded to the first author (A. Belanche) by the Spanish Ministry of Education and Science. Holtrop was funded by a core grant to Biomathematics and Statistics Scotland from the Scottish Executive Rural and Environment Research and Analysis Directorate. Thanks are due Maria del Carmen García and the staff from the animal research service from the University of Zaragoza (Zaragoza, Spain).
- Published
- 2011
- Full Text
- View/download PDF
19. Responses in whole-body amino acid kinetics to an acute, sub-clinical endotoxin challenge in lambs
- Author
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Hoskin, S. O., primary, Bremner, D. M., additional, Holtrop, G., additional, and Lobley, G. E., additional
- Published
- 2015
- Full Text
- View/download PDF
20. Influence of dietary carbohydrate and protein on colonic fermentation and endogenous formation of N-nitroso compounds
- Author
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Gratz, S. W., primary, Richardson, A. J., additional, Duncan, S. H., additional, Russell, W. R., additional, Fyfe, C., additional, Johnstone, A. M., additional, Flint, H. J., additional, and Holtrop, G., additional
- Published
- 2015
- Full Text
- View/download PDF
21. Study of the effect of presence or absence of protozoa on rumen fermentation and microbial protein contribution to the chyme1
- Author
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Belanche, A., primary, Abecia, L., additional, Holtrop, G., additional, Guada, J. A., additional, Castrillo, C., additional, de la Fuente, G., additional, and Balcells, J., additional
- Published
- 2011
- Full Text
- View/download PDF
22. Responses in whole-body amino acid kinetics to an acute, sub-clinical endotoxin challenge in lambs.
- Author
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Hoskin, S. O., Bremner, D. M., Holtrop, G., and Lobley, G. E.
- Subjects
AMINO acid analysis ,THERAPEUTIC use of amino acids ,INFLAMMATION treatment ,ANIMAL experimentation ,LYASES ,PROBABILITY theory ,SHEEP ,TREATMENT effectiveness ,LIPOPOLYSACCHARIDES - Abstract
Some effects of parasitism, endotoxaemia or sepsis can be mitigated by provision of extra protein. Supplemented protein may encompass a metabolic requirement for specific amino acids (AA). The current study investigates a method to identify and quantify the amounts of AA required during inflammation induced by an endotoxin challenge. One of each pair of six twin sheep was infused in the jugular vein for 20 h with either saline (control) or lipopolysaccharide (LPS, 2 ng/kg body weight per min) from Escherichia coli. Between 12 and 20 h a mixture of stable isotope-labelled AA was infused to measure irreversible loss rates. From 16 to 20 h all sheep were supplemented with a mixture of unlabelled AA infused intravenously. Blood samples were taken before the start of infusions, and then continuously over intervals between 14 and 20 h. At 20 h the sheep were euthanised, and liver and kidney samples were taken for measurement of serine-threonine dehydratase (SDH) activity. LPS infusion decreased plasma concentrations of most AA (P<0·05; P<0·10 for leucine and tryptophan), except for phenylalanine (which increased P=0·022) and tyrosine. On the basis of the incremental response to the supplemental AA, arginine, aspartate, cysteine, glutamate, lysine (tendency only), glycine, methionine, proline, serine and threonine were important in the metabolic response to the endotoxaemia. The AA infusion between 16 and 20 h restored the plasma concentrations in the LPS-treated sheep for the majority of AA, except for glutamine, isoleucine, methionine, serine and valine. LPS treatment increased (P<0·02) SDH activity in both liver and kidney. The approach allows quantification of key AA required during challenge situations. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
23. Seasonal variation in trawl codend selection of northern North Sea haddock
- Author
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Özbilgin, H., primary, Ferro, R.S.T., additional, Robertson, J.H.B., additional, Holtrop, G., additional, and Kynoch, R.J., additional
- Published
- 2006
- Full Text
- View/download PDF
24. Modelling endogenous leucine flows at the jejunum and ileum in lambs exposed to the intestinal parasite Trichostrongylus colubriformis
- Author
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Holtrop, G., primary, Yu, F., additional, Coop, R., additional, Bruce, L., additional, Lobley, G., additional, and MacRae, J., additional
- Published
- 2004
- Full Text
- View/download PDF
25. Modelling transport of amino acids into the red blood cells of sheep
- Author
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HOLTROP, G., primary, LAPIERRE, H., additional, and LOBLEY, G. E., additional
- Published
- 2004
- Full Text
- View/download PDF
26. Study of the effect of presence or absence of protozoa on rumen fermentation and microbial protein contribution to the chyme.
- Author
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A. Belanche, Abecia, L., Holtrop, G., Guada, J. A., Castrillo, C., Fuente, G. de la, and Balcells, J.
- Subjects
PROTOZOA ,RUMEN fermentation ,MICROBIAL proteins ,LAMBS ,SHEEP feeding ,ALFALFA ,BARLEY ,NUCLEOTIDE sequence ,ABOMASUM (Ruminants) - Abstract
The aim of this study was to investigate the effect of presence or absence of protozoa on rumen fermentation and efficiency of microbial protein synthesis under different diets. Of 20 twin paired lambs, 1 lamb of each pair was isolated from the ewe within 24 h after birth and reared in a protozoa-free environment (n = 10), whereas their respective twin-siblings remained with the ewe (faunated, n = 10). When lambs reached 6 mo of age, 5 animals of each group were randomly allocated to 1 of 2 experimental diets consisting of either alfalfa hay as the sole diet, or 50:50 mixed with ground barley grain according to a 2 × 2 factorial arrangement of treatments. After 15 d of adaptation to the diet, the animals were euthanized and total rumen and abomasal contents were sampled to estimate rumen microbial synthesis using C
31 alkane as flow marker. Different (15 N and purine bases) and a novel (recombinant DNA sequences) microbial markers, combined with several microbial reference extracts (rumen protozoa, liquid and solid associated bacteria) were evaluated. Absence of rumen protozoa modified the rumen fermentation pattern and decreased total tract OM and NDF digestibility in 2.0 and 5.1 percentage points, respectively. The effect of defaunation on microbial N flow was weak, however, and was dependent on the microbial marker and microbial reference extract considered. Faunated lambs fed with mixed diet showed the greatest rumen protozoal concentration and the least efficient microbial protein synthesis (29% less than the other treatments), whereas protozoa-free lambs fed with mixed diet presented the smallest ammonia concentration and 34% greater efficiency of N utilization than the other treatments. Although15 N gave the most precise estimates of microbial synthesis, the use of recombinant DNA sequences represents an alternative that allows separate quantification of the bacteria and protozoa contributions. This marker showed that presence of protozoa decrease the bacterial-N flow through the abomasum by 33%, whereas the protozoa-N contribution to the microbial N flow increased from 1.9 to 14.1% when barley grain was added to the alfalfa hay. Absolute data related to intestinal flow must be treated with caution because the limitations of the sampling and maker system employed. [ABSTRACT FROM AUTHOR]- Published
- 2011
- Full Text
- View/download PDF
27. Contribution of gut microbial lysine to liver and milk amino acids in lactating does.
- Author
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Abecia L, Balcells J, Fondevila M, Belenguer A, Holtrop G, and Lobley GE
- Published
- 2008
- Full Text
- View/download PDF
28. Impact of high-protein diets with either moderate or low carbohydrate on weight loss, body composition, blood pressure and glucose tolerance in rats.
- Author
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Lobley GE, Bremner DM, Holtrop G, Johnstone AM, and Maloney C
- Published
- 2007
- Full Text
- View/download PDF
29. Higher total faecal short-chain fatty acid concentrations correlate with increasing proportions of butyrate and decreasing proportions of branched-chain fatty acids across multiple human studies.
- Author
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LaBouyer M, Holtrop G, Horgan G, Gratz SW, Belenguer A, Smith N, Walker AW, Duncan SH, Johnstone AM, Louis P, Flint HJ, and Scott KP
- Abstract
Metabolites produced by microbial fermentation in the human intestine, especially short-chain fatty acids (SCFAs), are known to play important roles in colonic and systemic health. Our aim here was to advance our understanding of how and why their concentrations and proportions vary between individuals. We have analysed faecal concentrations of microbial fermentation acids from 10 human volunteer studies, involving 163 subjects, conducted at the Rowett Institute, Aberdeen, UK over a 7-year period. In baseline samples, the % butyrate was significantly higher, whilst % iso-butyrate and % iso-valerate were significantly lower, with increasing total SCFA concentration. The decreasing proportions of iso-butyrate and iso-valerate, derived from amino acid fermentation, suggest that fibre intake was mainly responsible for increased SCFA concentrations. We propose that the increase in % butyrate among faecal SCFA is largely driven by a decrease in colonic pH resulting from higher SCFA concentrations. Consistent with this, both total SCFA and % butyrate increased significantly with decreasing pH across five studies for which faecal pH measurements were available. Colonic pH influences butyrate production through altering the stoichiometry of butyrate formation by butyrate-producing species, resulting in increased acetate uptake and butyrate formation, and facilitating increased relative abundance of butyrate-producing species (notably Roseburia and Eubacterium rectale )., Competing Interests: The authors declare no conflicts of interests., (© The Author(s) 2022.)
- Published
- 2022
- Full Text
- View/download PDF
30. Pivotal Roles for pH, Lactate, and Lactate-Utilizing Bacteria in the Stability of a Human Colonic Microbial Ecosystem.
- Author
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Wang SP, Rubio LA, Duncan SH, Donachie GE, Holtrop G, Lo G, Farquharson FM, Wagner J, Parkhill J, Louis P, Walker AW, and Flint HJ
- Abstract
Lactate can be produced by many gut bacteria, but in adults its accumulation in the colon is often an indicator of microbiota perturbation. Using continuous culture anaerobic fermentor systems, we found that lactate concentrations remained low in communities of human colonic bacteria maintained at pH 6.5, even when dl-lactate was infused at 10 or 20 mM. In contrast, lower pH (5.5) led to periodic lactate accumulation following lactate infusion in three fecal microbial communities examined. Lactate accumulation was concomitant with greatly reduced butyrate and propionate production and major shifts in microbiota composition, with Bacteroidetes and anaerobic Firmicutes being replaced by Actinobacteria , lactobacilli, and Proteobacteria Pure-culture experiments confirmed that Bacteroides and Firmicutes isolates were susceptible to growth inhibition by relevant concentrations of lactate and acetate, whereas the lactate-producer Bifidobacterium adolescentis was resistant. To investigate system behavior further, we used a mathematical model (microPop) based on 10 microbial functional groups. By incorporating differential growth inhibition, our model reproduced the chaotic behavior of the system, including the potential for lactate infusion both to promote and to rescue the perturbed system. The modeling revealed that system behavior is critically dependent on the proportion of the community able to convert lactate into butyrate or propionate. Communities with low numbers of lactate-utilizing bacteria are inherently less stable and more prone to lactate-induced perturbations. These findings can help us to understand the consequences of interindividual microbiota variation for dietary responses and microbiota changes associated with disease states. IMPORTANCE Lactate is formed by many species of colonic bacteria, and can accumulate to high levels in the colons of inflammatory bowel disease subjects. Conversely, in healthy colons lactate is metabolized by lactate-utilizing species to the short-chain fatty acids butyrate and propionate, which are beneficial for the host. Here, we investigated the impact of continuous lactate infusions (up to 20 mM) at two pH values (6.5 and 5.5) on human colonic microbiota responsiveness and metabolic outputs. At pH 5.5 in particular, lactate tended to accumulate in tandem with decreases in butyrate and propionate and with corresponding changes in microbial composition. Moreover, microbial communities with low numbers of lactate-utilizing bacteria were inherently less stable and therefore more prone to lactate-induced perturbations. These investigations provide clear evidence of the important role these lactate utilizers may play in health maintenance. These should therefore be considered as potential new therapeutic probiotics to combat microbiota perturbations., (Copyright © 2020 Wang et al.)
- Published
- 2020
- Full Text
- View/download PDF
31. A randomised, double-blind, cross-over trial to evaluate bread, in which gluten has been pre-digested by prolyl endoprotease treatment, in subjects self-reporting benefits of adopting a gluten-free or low-gluten diet.
- Author
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Rees D, Holtrop G, Chope G, Moar KM, Cruickshank M, and Hoggard N
- Subjects
- Cardiovascular Diseases blood, Cholesterol, HDL blood, Cholesterol, LDL blood, Cross-Over Studies, Double-Blind Method, Feeding Behavior, Female, Flour analysis, Food Intolerance complications, Fungal Proteins metabolism, Gastrointestinal Diseases etiology, Gastrointestinal Diseases prevention & control, Hematology, Humans, Male, Middle Aged, Prolyl Oligopeptidases, Triticum chemistry, Aspergillus niger enzymology, Bread analysis, Diet, Gluten-Free, Digestion, Food Intolerance diet therapy, Glutens administration & dosage, Glutens adverse effects, Glutens metabolism, Serine Endopeptidases metabolism
- Abstract
The aim of the present study was to determine if the enzyme Aspergillus niger prolyl endoprotease (ANPEP), which degrades the immunogenic proline-rich residues in gluten peptides, can be used in the development of new wheat products, suitable for gluten-sensitive (GS) individuals. We have carried out a double-blind, randomised, cross-over trial with two groups of adults; subjects, self-reporting benefits of adopting a gluten-free or low-gluten diet (GS, n 16) and a control non-GS group (n 12). For the trial, volunteers consumed four wheat breads: normal bread, bread treated with 0·8 or 1 % ANPEP and low-protein bread made from biscuit flour. Compared with controls, GS subjects had a favourable cardiovascular lipid profile - lower LDL (4·0 (sem 0·3) v. 2·8 (sem 0·2) mmol/l; P=0·008) and LDL:HDL ratio (3·2 (sem 0·4) v. 1·8 (sem 0·2); P=0·005) and modified haematological profile. The majority of the GS subjects followed a low-gluten lifestyle, which helps to reduce the gastrointestinal (GI) symptoms severity. The low-gluten lifestyle does not have any effect on the quality of life, fatigue or mental state of this population. Consumption of normal wheat bread increased GI symptoms in GS subjects compared with their habitual diet. ANPEP lowered the immunogenic gluten in the treated bread by approximately 40 %. However, when compared with the control bread for inducing GI symptoms, no treatment effects were apparent. ANPEP can be applied in the production of bread with taste, texture and appearance comparable with standard bread.
- Published
- 2018
- Full Text
- View/download PDF
32. Specific substrate-driven changes in human faecal microbiota composition contrast with functional redundancy in short-chain fatty acid production.
- Author
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Reichardt N, Vollmer M, Holtrop G, Farquharson FM, Wefers D, Bunzel M, Duncan SH, Drew JE, Williams LM, Milligan G, Preston T, Morrison D, Flint HJ, and Louis P
- Subjects
- Bacteria genetics, Bacteria isolation & purification, Butyrates metabolism, Eubacterium metabolism, Feces microbiology, Fermentation, Galactose analogs & derivatives, Humans, Mannans metabolism, Propionates metabolism, Reproducibility of Results, Rhamnose metabolism, Bacteria metabolism, Dietary Carbohydrates metabolism, Fatty Acids, Volatile metabolism, Microbiota
- Abstract
The diet provides carbohydrates that are non-digestible in the upper gut and are major carbon and energy sources for the microbial community in the lower intestine, supporting a complex metabolic network. Fermentation produces the short-chain fatty acids (SCFAs) acetate, propionate and butyrate, which have health-promoting effects for the human host. Here we investigated microbial community changes and SCFA production during in vitro batch incubations of 15 different non-digestible carbohydrates, at two initial pH values with faecal microbiota from three different human donors. To investigate temporal stability and reproducibility, a further experiment was performed 1 year later with four of the carbohydrates. The lower pH (5.5) led to higher butyrate and the higher pH (6.5) to more propionate production. The strongest propionigenic effect was found with rhamnose, followed by galactomannans, whereas fructans and several α- and β-glucans led to higher butyrate production. 16S ribosomal RNA gene-based quantitative PCR analysis of 22 different microbial groups together with 454 sequencing revealed significant stimulation of specific bacteria in response to particular carbohydrates. Some changes were ascribed to metabolite cross-feeding, for example, utilisation by Eubacterium hallii of 1,2-propanediol produced from fermentation of rhamnose by Blautia spp. Despite marked inter-individual differences in microbiota composition, SCFA production was surprisingly reproducible for different carbohydrates, indicating a level of functional redundancy. Interestingly, butyrate formation was influenced not only by the overall % butyrate-producing bacteria in the community but also by the initial pH, consistent with a pH-dependent shift in the stoichiometry of butyrate production.
- Published
- 2018
- Full Text
- View/download PDF
33. Porcine Small and Large Intestinal Microbiota Rapidly Hydrolyze the Masked Mycotoxin Deoxynivalenol-3-Glucoside and Release Deoxynivalenol in Spiked Batch Cultures In Vitro .
- Author
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Gratz SW, Currie V, Richardson AJ, Duncan G, Holtrop G, Farquharson F, Louis P, Pinton P, and Oswald IP
- Subjects
- Anaerobiosis, Animals, Batch Cell Culture Techniques, Edible Grain chemistry, Feces chemistry, Feces microbiology, Food Contamination, Gastrointestinal Microbiome genetics, Humans, Hydrolysis, Intestines anatomy & histology, Jejunum microbiology, Jejunum physiology, Mycotoxins analysis, Mycotoxins metabolism, Mycotoxins toxicity, Polymerase Chain Reaction, Swine, Trichothecenes analysis, Gastrointestinal Microbiome drug effects, Gastrointestinal Microbiome physiology, Glucosides pharmacology, Intestines microbiology, Mycotoxins pharmacology, Trichothecenes metabolism, Trichothecenes pharmacology
- Abstract
Mycotoxin contamination of cereal grains causes well-recognized toxicities in animals and humans, but the fate of plant-bound masked mycotoxins in the gut is less well understood. Masked mycotoxins have been found to be stable under conditions prevailing in the small intestine but are rapidly hydrolyzed by fecal microbiota. This study aims to assess the hydrolysis of the masked mycotoxin deoxynivalenol-3-glucoside (DON3Glc) by the microbiota of different regions of the porcine intestinal tract. Intestinal digesta samples were collected from the jejunum, ileum, cecum, colon, and feces of 5 pigs and immediately frozen under anaerobic conditions. Sample slurries were prepared in M2 culture medium, spiked with DON3Glc or free deoxynivalenol (DON; 2 nmol/ml), and incubated anaerobically for up to 72 h. Mycotoxin concentrations were determined using liquid chromatography-tandem mass spectrometry, and the microbiota composition was determined using a quantitative PCR methodology. The jejunal microbiota hydrolyzed DON3Glc very slowly, while samples from the ileum, cecum, colon, and feces rapidly and efficiently hydrolyzed DON3Glc. No further metabolism of DON was observed in any sample. The microbial load and microbiota composition in the ileum were significantly different from those in the distal intestinal regions, whereas those in the cecum, colon and feces did not differ. IMPORTANCE Results from this study clearly demonstrate that the masked mycotoxin DON3Glc is hydrolyzed efficiently in the distal small intestine and large intestine of pigs. Once DON is released, toxicity and absorption in the distal intestinal tract likely occur in vivo This study further supports the need to include masked metabolites in mycotoxin risk assessments and regulatory actions for feed and food., (Copyright © 2018 American Society for Microbiology.)
- Published
- 2018
- Full Text
- View/download PDF
34. mRNA Levels of Placental Iron and Zinc Transporter Genes Are Upregulated in Gambian Women with Low Iron and Zinc Status.
- Author
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Jobarteh ML, McArdle HJ, Holtrop G, Sise EA, Prentice AM, and Moore SE
- Subjects
- Adult, Anemia, Iron-Deficiency epidemiology, Anemia, Iron-Deficiency metabolism, Cation Transport Proteins genetics, Dietary Proteins administration & dosage, Dietary Supplements, Energy Intake, Female, Fetal Blood, Folic Acid administration & dosage, Gambia, Humans, Iron administration & dosage, Iron pharmacology, Micronutrients administration & dosage, Pregnancy, RNA, Messenger genetics, Reverse Transcriptase Polymerase Chain Reaction, Zinc administration & dosage, Zinc deficiency, Zinc pharmacology, Cation Transport Proteins metabolism, Gene Expression Regulation physiology, Iron metabolism, Placenta metabolism, RNA, Messenger metabolism, Zinc metabolism
- Abstract
Background: The role of the placenta in regulating micronutrient transport in response to maternal status is poorly understood. Objective: We investigated the effect of prenatal nutritional supplementation on the regulation of placental iron and zinc transport. Methods: In a randomized trial in rural Gambia [ENID (Early Nutrition and Immune Development)], pregnant women were allocated to 1 of 4 nutritional intervention arms: 1 ) iron and folic acid (FeFol) tablets (FeFol group); 2 ) multiple micronutrient (MMN) tablets (MMN group); 3 ) protein energy (PE) as a lipid-based nutrient supplement (LNS; PE group); and 4 ) PE and MMN (PE+MMN group) as LNS. All arms included iron (60 mg/d) and folic acid (400 μg/d). The MMN and PE+MMN arms included 30 mg supplemental Zn/d. In a subgroup of ∼300 mother-infant pairs, we measured maternal iron status, mRNA levels of genes encoding for placental iron and zinc transport proteins, and cord blood iron levels. Results: Maternal plasma iron concentration in late pregnancy was 45% and 78% lower in the PE and PE+MMN groups compared to the FeFol and MMN groups, respectively ( P < 0.001). The mRNA levels of the placental iron uptake protein transferrin receptor 1 were 30-49% higher in the PE and PE+MMN arms than in the FeFol arm ( P < 0.031), and also higher in the PE+MMN arm (29%; P = 0.042) than in the MMN arm. Ferritin in infant cord blood was 18-22% lower in the LNS groups ( P < 0.024). Zinc supplementation in the MMN arm was associated with higher maternal plasma zinc concentrations (10% increase; P < 0.001) than in other intervention arms. mRNA levels for intracellular zinc-uptake proteins, in this case zrt, irt-like protein (ZIP) 4 and ZIP8, were 96-205% lower in the PE+MMN arm than in the intervention arms without added zinc ( P < 0.025). Furthermore, mRNA expression of ZIP1 was 85% lower in the PE+MMN group than in the PE group ( P = 0.003). Conclusion: In conditions of low maternal iron and in the absence of supplemental zinc, the placenta upregulates the gene expression of iron and zinc uptake proteins, presumably in order to meet fetal demands in the face of low maternal supply. The ENID trial was registered at www.controlled-trials.com as ISRCTN49285450., Competing Interests: Author disclosures: MLJ, HJM GH, EAS, AMP, and SEM, no conflicts of interest.
- Published
- 2017
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35. Masked trichothecene and zearalenone mycotoxins withstand digestion and absorption in the upper GI tract but are efficiently hydrolyzed by human gut microbiota in vitro.
- Author
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Gratz SW, Dinesh R, Yoshinari T, Holtrop G, Richardson AJ, Duncan G, MacDonald S, Lloyd A, and Tarbin J
- Subjects
- Caco-2 Cells metabolism, Fusarium metabolism, Humans, Hydrolysis, T-2 Toxin metabolism, Upper Gastrointestinal Tract, Zeranol analogs & derivatives, Zeranol metabolism, Gastrointestinal Microbiome, Mycotoxins pharmacology, Trichothecenes pharmacology, Zearalenone pharmacology
- Abstract
Scope: Cereal grains are commonly contaminated with Fusarium mycotoxins and their plant-derived masked metabolites. The fate of masked mycotoxins in the human gut is poorly understood. Here we assess the metabolism and transport of glucoside metabolites of common trichothecenes (deoxynivalenol, nivalenol, T-2 toxin) and zearalenone compounds (zearalenone, α- and β-zearalenol) in the human gut in vitro., Methods and Results: Masked mycotoxins were incubated with artificial digestive juices and absorption was assessed in differentiated Caco-2/TC7 cells. Colonic metabolism was studied using fecal batch cultures from five donors and mycotoxins were detected using LC-MS/MS. All masked mycotoxins were stable under upper GI tract conditions and no absorption was observed. Free trichothecenes were absorbed intact whereas free zearalenone compounds were absorbed and metabolized to undetected compounds by Caco-2/TC7 cells. Human gut microbiota efficiently hydrolyzed all masked mycotoxins. Trichothecenes were fully recovered as parent mycotoxins whereas 40-70% of zearalenone compounds were further metabolized to unknown metabolites., Conclusion: Our results demonstrate that masked trichothecenes will reach the colon intact to be released as parent mycotoxins by gut microbiota, hence contributing to mycotoxin exposure. Masked zearalenone compounds are metabolized by gut microbiota and epithelial cells and the identity and toxicity of metabolites remain to be determined., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2017
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36. Fish oil supplemented for 9 months does not improve glycaemic control or insulin sensitivity in subjects with impaired glucose regulation: a parallel randomised controlled trial.
- Author
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Clark LF, Thivierge MC, Kidd CA, McGeoch SC, Abraham P, Pearson DW, Horgan GW, Holtrop G, Thies F, and Lobley GE
- Subjects
- Aged, Dietary Fats, Unsaturated blood, Double-Blind Method, Erythrocytes, Fasting, Fatty Acids, Omega-3 blood, Fatty Acids, Omega-3 pharmacology, Female, Gluconeogenesis drug effects, Glucose Clamp Technique, Humans, Male, Middle Aged, Proteins metabolism, Blood Glucose metabolism, Dietary Fats, Unsaturated pharmacology, Dietary Supplements, Fish Oils pharmacology, Insulin metabolism, Insulin Resistance
- Abstract
The effects of fish oil (FO) supplementation on glycaemic control are unclear, and positive effects may occur only when the phospholipid content of tissue membranes exceeds 14% as n-3 PUFA. Subjects (n 36, thirty-three completed) were paired based on metabolic parameters and allocated into a parallel double-blind randomised trial with one of each pair offered daily either 6 g of FO (3·9 g n-3 PUFA) or 6 g of maize oil (MO) for 9 months. Hyperinsulinaemic-euglycaemic-euaminoacidaemic (HIEGEAA) clamps (with [6,6 2H2 glucose]) were performed at the start and end of the intervention. Endogenous glucose production (EGP) and whole-body protein turnover (WBPT) were each measured after an overnight fast. The primary outcome involved the effect of oil type on insulin sensitivity related to glycaemic control. The secondary outcome involved the effect of oil type on WBPT. Subjects on FO (n 16) had increased erythrocyte n-3 PUFA concentrations >14%, whereas subjects on MO (n 17) had unaltered n-3 PUFA concentrations at 9%. Type of oil had no effect on fasting EGP, insulin sensitivity or total glucose disposal during the HIEGEAA clamp. In contrast, under insulin-stimulated conditions, total protein disposal (P=0·007) and endogenous WBPT (P=0·001) were both increased with FO. In an associated pilot study (n 4, three completed), although n-3 PUFA in erythrocyte membranes increased to >14% with the FO supplement, the enrichment in muscle membranes remained lower (8%; P<0·001). In conclusion, long-term supplementation with FO, at amounts near the safety limits set by regulatory authorities in Europe and the USA, did not alter glycaemic control but did have an impact on WBPT.
- Published
- 2016
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37. Modelling the emergent dynamics and major metabolites of the human colonic microbiota.
- Author
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Kettle H, Louis P, Holtrop G, Duncan SH, and Flint HJ
- Subjects
- Acetates metabolism, Biodiversity, Butyrates metabolism, Diet, Feces microbiology, Humans, Models, Theoretical, Phylogeny, Propionates metabolism, Colon microbiology, Computer Simulation, Microbiota
- Abstract
We present here a first attempt at modelling microbial dynamics in the human colon incorporating both uncertainty and adaptation. This is based on the development of a Monod-equation based, differential equation model, which produces computer simulations of the population dynamics and major metabolites of microbial communities from the human colon. To reduce the complexity of the system, we divide the bacterial community into 10 bacterial functional groups (BFGs) each distinguished by its substrate preferences, metabolic pathways and its preferred pH range. The model simulates the growth of a large number of bacterial strains and incorporates variation in microbiota composition between people, while also allowing succession and enabling adaptation to environmental changes. The model is shown to reproduce many of the observed changes in major phylogenetic groups and key metabolites such as butyrate, acetate and propionate in response to a one unit pH shift in experimental continuous flow fermentors inoculated with human faecal microbiota. Nevertheless, it should be regarded as a learning tool to be updated as our knowledge of bacterial groups and their interactions expands. Given the difficulty of accessing the colon, modelling can play an extremely important role in interpreting experimental data and predicting the consequences of dietary modulation., (© 2014 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.)
- Published
- 2015
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38. Responses in gut hormones and hunger to diets with either high protein or a mixture of protein plus free amino acids supplied under weight-loss conditions.
- Author
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Lobley GE, Holtrop G, Horgan GW, Bremner DM, Fyfe C, and Johnstone AM
- Subjects
- Adult, Aged, Appetite, Area Under Curve, Blood Glucose analysis, Body Composition, Body Mass Index, Body Weight, Gastric Inhibitory Polypeptide blood, Gastrointestinal Hormones blood, Ghrelin blood, Humans, Male, Middle Aged, Obesity blood, Obesity metabolism, Peptide YY blood, Postprandial Period, Psychometrics, Tryptophan chemistry, Weight Loss, Young Adult, Amino Acids chemistry, Diet, Reducing, Dietary Proteins chemistry, Hunger, Intestinal Mucosa metabolism
- Abstract
High-protein diets are an effective means for weight loss (WL), but the mechanisms are unclear. One hypothesis relates to the release of gut hormones by either protein or amino acids (AA). The present study involved overweight and obese male volunteers (n 18, mean BMI 36·8 kg/m2) who consumed a maintenance diet for 7 d followed by fully randomised 10 d treatments with three iso-energetic WL diets, i.e. with either normal protein (NP, 15% of energy) or high protein (HP, 30%) or with a combination of protein and free AA, each 15% of energy (NPAA). Psychometric ratings of appetite were recorded hourly. On day 10, plasma samples were taken at 30 min intervals over two consecutive 5 h periods (covering post-breakfast and post-lunch) and analysed for AA, glucose and hormones (insulin, total glucose-dependent insulinotropic peptide, active ghrelin and total peptide YY (PYY)) plus leucine kinetics (first 5 h only). Composite hunger was 16% lower for the HP diet than for the NP diet (P<0·01) in the 5 h period after both meals. Plasma essential AA concentrations were greatest within 60 min of each meal for the NPAA diet, but remained elevated for 3-5 h after the HP diet. The three WL diets showed no difference for either fasting concentrations or the postprandial net incremental AUC (net AUCi) for insulin, ghrelin or PYY. No strong correlations were observed between composite hunger scores and net AUCi for either AA or gut peptides. Regulation of hunger may involve subtle interactions, and a range of signals may need to be integrated to produce the overall response.
- Published
- 2015
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39. Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men.
- Author
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Salonen A, Lahti L, Salojärvi J, Holtrop G, Korpela K, Duncan SH, Date P, Farquharson F, Johnstone AM, Lobley GE, Louis P, Flint HJ, and de Vos WM
- Subjects
- Adult, Aged, Bacteria classification, Bacteria genetics, Bacteria isolation & purification, Bacteria metabolism, Cross-Over Studies, Diet, Reducing, Fatty Acids, Volatile analysis, Feces chemistry, Feces microbiology, Fermentation, Humans, Male, Metabolic Syndrome diet therapy, Metabolic Syndrome microbiology, Middle Aged, Phylogeny, Intestines microbiology, Microbiota, Obesity diet therapy, Obesity microbiology
- Abstract
There is growing interest in understanding how diet affects the intestinal microbiota, including its possible associations with systemic diseases such as metabolic syndrome. Here we report a comprehensive and deep microbiota analysis of 14 obese males consuming fully controlled diets supplemented with resistant starch (RS) or non-starch polysaccharides (NSPs) and a weight-loss (WL) diet. We analyzed the composition, diversity and dynamics of the fecal microbiota on each dietary regime by phylogenetic microarray and quantitative PCR (qPCR) analysis. In addition, we analyzed fecal short chain fatty acids (SCFAs) as a proxy of colonic fermentation, and indices of insulin sensitivity from blood samples. The diet explained around 10% of the total variance in microbiota composition, which was substantially less than the inter-individual variance. Yet, each of the study diets induced clear and distinct changes in the microbiota. Multiple Ruminococcaceae phylotypes increased on the RS diet, whereas mostly Lachnospiraceae phylotypes increased on the NSP diet. Bifidobacteria decreased significantly on the WL diet. The RS diet decreased the diversity of the microbiota significantly. The total 16S ribosomal RNA gene signal estimated by qPCR correlated positively with the three major SCFAs, while the amount of propionate specifically correlated with the Bacteroidetes. The dietary responsiveness of the individual's microbiota varied substantially and associated inversely with its diversity, suggesting that individuals can be stratified into responders and non-responders based on the features of their intestinal microbiota.
- Published
- 2014
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40. Oat-enriched diet reduces inflammatory status assessed by circulating cell-derived microparticle concentrations in type 2 diabetes.
- Author
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Zhang X, McGeoch SC, Megson IL, MacRury SM, Johnstone AM, Abraham P, Pearson DW, de Roos B, Holtrop G, O'Kennedy N, and Lobley GE
- Subjects
- Adult, Aged, Biomarkers blood, Blood Platelets metabolism, Cross-Over Studies, Female, Fibrinogen metabolism, Humans, Leukocytes metabolism, Male, Middle Aged, P-Selectin metabolism, Postprandial Period physiology, Avena, Cell-Derived Microparticles metabolism, Diabetes Mellitus, Type 2 blood, Diet, Inflammation blood
- Abstract
Scope: Inflammatory status can increase the risk of adverse cardiovascular events linked to platelet activity and involvement of microparticles (MP) released from platelets (PMP), leukocytes (LMP), and monocytes (MMP). These MP carry host cell-derived antigens that may act as markers of metabolic health. Subjects newly diagnosed with type 2 diabetes are offered appropriate standard dietary advice (SDA) but this may not be optimal as specific inclusion of other nutrients, such as oats, may add benefit. The effectiveness of such interventions can be tested by examination of MP activation markers., Methods and Results: Subjects (n = 22) with type 2 diabetes participated in a randomized cross-over trial involving 8 wk interventions with either an oat-enriched diet (OAT) or following reinforced SDA. Responses were also compared with preintervention habitual (HAB) intake. OAT reduced the concentrations and proportions of fibrinogen- and tissue factor-related PMP and MMP_11b. The main effect of SDA was to reduce fibrinogen-activated PMP. Regardless of chronic intake, a healthy test meal led to postprandial declines in total PMP as well as tissue factor-, fibrinogen-, and P-selectin-positive PMP., Conclusion: OAT improved risk factors assessed by MP status, even in subjects with type 2 diabetes already well-controlled by diet and life-style alone., (© 2014 The Authors. Molecular Nutrition & Food Research published by Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2014
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41. Platelet-derived microparticle count and surface molecule expression differ between subjects with and without type 2 diabetes, independently of obesity status.
- Author
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Zhang X, McGeoch SC, Johnstone AM, Holtrop G, Sneddon AA, MacRury SM, Megson IL, Pearson DW, Abraham P, De Roos B, Lobley GE, and O'Kennedy N
- Subjects
- Adult, Aged, Atherosclerosis etiology, Blood Platelets, Diabetic Angiopathies blood, Female, Humans, Leukocyte Count, Male, Middle Aged, Risk Factors, Atherosclerosis blood, Biomarkers blood, Cell-Derived Microparticles metabolism, Diabetes Mellitus, Type 2 blood, Obesity blood, Platelet Activation
- Abstract
This study investigated the impact of either type 2 diabetes or obesity, separately or in combination, on the absolute amounts of microparticles (MP) and the pathways by which these are associated with either condition. The concentrations of circulating MP derived from platelets (PMP), leukocytes (LMP) and monocytes (MMP), together with their specific activation markers, were compared in 30 subjects who were characterised across 4 cohorts as obese or type 2 diabetes. The subjects with type 2 diabetes had elevated concentrations of total PMP (P = 0.003), and PMP that were fibrinogen-positive (P = 0.04), tissue factor-positive (P < 0.001), P-selectin-positive (P = 0.03). Type 2 diabetes did not alter either total or activated LMP or MMP. Obesity per se did not impact on any MP measurement. Elevated concentrations of plasma PMP occurred in subjects with type 2 diabetes, whether they were obese or non-obese. In contrast, obesity in the absence of type 2 diabetes had no effect. The increased concentrations of specific marker-positive PMP in the subjects with diabetes might reflect potential pathways by which PMP may contribute to the pathogenesis of atherosclerosis and type 2 diabetes.
- Published
- 2014
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42. Glucose uptake by the brain on chronic high-protein weight-loss diets with either moderate or low amounts of carbohydrate.
- Author
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Lobley GE, Johnstone AM, Fyfe C, Horgan GW, Holtrop G, Bremner DM, Broom I, Schweiger L, and Welch A
- Subjects
- Adult, Appetite Regulation, Body Mass Index, Carbon Isotopes metabolism, Cross-Over Studies, Diet, Carbohydrate-Restricted, Diet, Ketogenic, Dietary Carbohydrates metabolism, Dietary Carbohydrates pharmacology, Dietary Proteins pharmacology, Energy Intake, Humans, Male, Middle Aged, Obesity diet therapy, Brain metabolism, Diet, Reducing, Dietary Carbohydrates administration & dosage, Dietary Proteins administration & dosage, Glucose metabolism, Ketones metabolism, Obesity metabolism
- Abstract
Previous work has shown that hunger and food intake are lower in individuals on high-protein (HP) diets when combined with low carbohydrate (LC) intakes rather than with moderate carbohydrate (MC) intakes and where a more ketogenic state occurs. The aim of the present study was to investigate whether the difference between HPLC and HPMC diets was associated with changes in glucose and ketone body metabolism, particularly within key areas of the brain involved in appetite control. A total of twelve men, mean BMI 34·9 kg/m², took part in a randomised cross-over trial, with two 4-week periods when isoenergetic fixed-intake diets (8·3 MJ/d) were given, with 30% of the energy being given as protein and either (1) a very LC (22 g/d; HPLC) or (2) a MC (182 g/d; HPMC) intake. An ¹⁸fluoro-deoxyglucose positron emission tomography scan of the brain was conducted at the end of each dietary intervention period, following an overnight fast (n 4) or 4 h after consumption of a test meal (n 8). On the next day, whole-body ketone and glucose metabolism was quantified using [1,2,3,4-¹³C]acetoacetate, [2,4-¹³C]3-hydroxybutyrate and [6,6-²H₂]glucose. The composite hunger score was 14% lower (P= 0·013) for the HPLC dietary intervention than for the HPMC diet. Whole-body ketone flux was approximately 4-fold greater for the HPLC dietary intervention than for the HPMC diet (P< 0·001). The 9-fold difference in carbohydrate intakes between the HPLC and HPMC dietary interventions led to a 5% lower supply of glucose to the brain. Despite this, the uptake of glucose by the fifty-four regions of the brain analysed remained similar for the two dietary interventions. In conclusion, differences in the composite hunger score observed for the two dietary interventions are not associated with the use of alternative fuels by the brain.
- Published
- 2014
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43. Annual variation of dietary deoxynivalenol exposure during years of different Fusarium prevalence: a pilot biomonitoring study.
- Author
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Gratz SW, Richardson AJ, Duncan G, and Holtrop G
- Subjects
- Adult, Biomarkers urine, Creatinine urine, Environmental Monitoring, Female, Humans, Male, Middle Aged, Pilot Projects, Time Factors, Young Adult, Food Contamination analysis, Fusarium physiology, Trichothecenes chemistry
- Abstract
Dietary exposure to deoxynivalenol (DON) has been reported previously in the UK, but levels were low and most individuals are well protected by the maximum permitted levels in food set by the European Commission. However, no information is available on annual fluctuation in dietary DON exposure. We hypothesised that dietary DON exposure may vary when individuals consume cereals derived from harvests with low (2011) and high (2012) Fusarium prevalence. In this pilot study, spot urine samples were collected in years 1 and 2 from 15 volunteers following their habitual diet. Urinary DON was analysed by LC-MS/MS to estimate 24-h DON excretion and daily dietary DON intake. DON was detectable in all urine samples with an average excretion of 10.08 ± 9.13 µg/24-h urine in year 1 which significantly (p = 0.005) increased to 24.84 ± 13.83 µg/24-h urine in year 2. This resulted from an estimated dietary intake of 195.94 ± 166.44 ng DON kg(-1) BW in year 1 and 518.64 ± 292.49 ng DON kg(-1) BW in year 2. Based on these estimates, the tolerable daily intake for DON was exceeded in 13% of occasions in year 2 and none in year 1. This pilot study is based on estimates of DON intake derived from urinary DON excretion. Results suggest that DON exposure varies annually and that current maximum levels might not sufficiently protect consumers during years of high Fusarium prevalence.
- Published
- 2014
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44. Impact of short term consumption of diets high in either non-starch polysaccharides or resistant starch in comparison with moderate weight loss on indices of insulin sensitivity in subjects with metabolic syndrome.
- Author
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Lobley GE, Holtrop G, Bremner DM, Calder AG, Milne E, and Johnstone AM
- Subjects
- Blood Glucose analysis, C-Peptide blood, Carbohydrate Metabolism, Cross-Over Studies, Diet, Reducing methods, Dietary Proteins administration & dosage, Energy Intake, Energy Metabolism, Fasting, Homeostasis, Humans, Insulin blood, Leucine metabolism, Male, Models, Biological, Obesity diet therapy, Starch administration & dosage, Insulin Resistance, Metabolic Syndrome diet therapy, Polysaccharides administration & dosage, Weight Loss
- Abstract
This study investigated if additional non-starch polysaccharide (NSP) or resistant starch (RS), above that currently recommended, leads to better improvement in insulin sensitivity (IS) than observed with modest weight loss (WL). Obese male volunteers (n = 14) were given an energy-maintenance (M) diet containing 27 g NSP and 5 g RS daily for one week. They then received, in a cross-over design, energy-maintenance intakes of either an NSP-enriched diet (42 g NSP, 2.5 g RS) or an RS-enriched diet (16 g NSP, 25 g RS), each for three weeks. Finally, a high protein (30% calories) WL diet was provided at 8 MJ/day for three weeks. During each dietary intervention, endogenous glucose production (EGP) and IS were assessed. Fasting glycaemia was unaltered by diet, but plasma insulin and C-peptide both decreased with the WL diet (p < 0.001), as did EGP (-11%, p = 0.006). Homeostatis model assessment of insulin resistance improved following both WL (p < 0.001) and RS (p < 0.05) diets. Peripheral tissue IS improved only with WL (57%-83%, p < 0.005). Inclusion of additional RS or NSP above amounts currently recommended resulted in little or no improvement in glycaemic control, whereas moderate WL (approximately 3 kg fat) improved IS.
- Published
- 2013
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45. Diet composition is associated with endogenous formation of N-nitroso compounds in obese men.
- Author
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Holtrop G, Johnstone AM, Fyfe C, and Gratz SW
- Subjects
- Adult, Aged, Animals, Cross-Over Studies, Energy Metabolism physiology, Feces chemistry, Gastrointestinal Neoplasms epidemiology, Gastrointestinal Neoplasms metabolism, Gastrointestinal Neoplasms prevention & control, Humans, Iron administration & dosage, Iron metabolism, Male, Meat, Middle Aged, Nitrates administration & dosage, Nitrates metabolism, Obesity epidemiology, Risk Factors, Vegetables, Diet, Reducing, Dietary Carbohydrates administration & dosage, Dietary Proteins administration & dosage, Nitrosamines metabolism, Obesity diet therapy, Obesity metabolism
- Abstract
Endogenous formation of carcinogenic N-nitroso compounds (NOC) occurs in the human gut. Red meat is considered the most important dietary component linked to NOC formation, although nitrate and vitamin C (VitC) also contribute. We previously showed that high-protein weight-loss diets increased fecal NOC and this was enhanced by simultaneous carbohydrate restriction. Although previous studies have focused on the effect of either 1 or 2 dietary components on endogenous NOC formation, no study to date has investigated the combined contribution of various dietary components. The current study therefore assessed the joint impact of several known dietary contributors to the endogenous formation of NOC in obese men. It also aimed to identify further novel contributors and investigate their role in explaining shifts in endogenous formation of NOC. Three dietary trials were conducted in obese men consuming body weight maintenance or weight-loss diets, with NOC measured in fecal samples. Consumption of meat-based weight-loss diets increased (P < 0.001) fecal NOC. Red meat intake was positively correlated with the fecal log NOC concentration (r = 0.60; P < 0.001). Dietary carbohydrate and sugar were negatively correlated with the fecal log NOC concentration (r = -0.66 for both; P < 0.001). Multiple regression analysis identified several dietary components that drive endogenous NOC formation, namely, red meat, nitrate, VitC, total energy, and nonstarch polysaccharides. We present a regression model that predicts endogenous NOC formation in obese men based on their dietary intakes. This model could improve the estimation of endogenous NOC formation, currently used in epidemiological studies into diet and cancer.
- Published
- 2012
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46. Phylogenetic distribution of genes encoding β-glucuronidase activity in human colonic bacteria and the impact of diet on faecal glycosidase activities.
- Author
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McIntosh FM, Maison N, Holtrop G, Young P, Stevens VJ, Ince J, Johnstone AM, Lobley GE, Flint HJ, and Louis P
- Subjects
- Bacteria genetics, Colon microbiology, Feces enzymology, Glucuronidase genetics, Glycoside Hydrolases genetics, Humans, Male, Metagenome, RNA, Ribosomal, 16S genetics, Bacteria classification, Bacteria enzymology, Diet, Feces microbiology, Glucuronidase metabolism, Glycoside Hydrolases metabolism, Phylogeny
- Abstract
Bacterial β-glucuronidase in the human colon plays an important role in cleaving liver conjugates of dietary compounds and xenobiotics, while other glycosidase activities are involved in the conversion of dietary plant glycosides. Here we detected an increase in β-glucuronidase activity in faecal samples from obese volunteers following a high-protein moderate carbohydrate weight-loss diet, compared with a weight maintenance diet, but little or no changes were observed when the type of fermentable carbohydrate was varied. Other faecal glycosidase activities showed little or no change over a fivefold range of dietary NSP intake, although α-glucosidase increased on a resistant starch-enriched diet. Two distinct groups of gene, gus and BG, have been reported to encode β-glucuronidase activity among human colonic bacteria. Degenerate primers were designed against these genes. Overall, Firmicutes were found to account for 96% of amplified gus sequences, with three operational taxonomic units particularly abundant, whereas 59% of amplified BG sequences belonged to Bacteroidetes and 41% to Firmicutes. A similar distribution of operational taxonomic units was found in a published metagenome dataset involving a larger number of volunteers. Seven cultured isolates of human colonic bacteria that carried only the BG gene gave relatively low β-glucuronidase activity that was not induced by 4-nitrophenyl-β-D-glucuronide. By comparison, in three of five isolates that possessed only the gus gene, β-glucuronidase activity was induced., (© 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.)
- Published
- 2012
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47. Effects of methyl-deficient diets on methionine and homocysteine metabolism in the pregnant rat.
- Author
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Wilson FA, Holtrop G, Calder AG, Anderson SE, Lobley GE, and Rees WD
- Subjects
- Animals, Choline metabolism, Choline pharmacology, Cysteine metabolism, Female, Fetus metabolism, Folic Acid metabolism, Folic Acid pharmacology, Kinetics, Litter Size, Liver metabolism, Methionine analogs & derivatives, Methionine pharmacology, Pancreas metabolism, Phosphorylcholine metabolism, Placenta metabolism, Pregnancy, Rats, Triglycerides metabolism, Weight Gain drug effects, Diet, Homocysteine metabolism, Methionine metabolism, Methylation
- Abstract
Although the importance of methyl metabolism in fetal development is well recognized, there is limited information on the dynamics of methionine flow through maternal and fetal tissues and on how this is related to circulating total homocysteine concentrations. Rates of homocysteine remethylation in maternal and fetal tissues on days 11, 19, and 21 of gestation were measured in pregnant rats fed diets with limiting or surplus amounts of folic acid and choline at two levels of methionine and then infused with L-[1-(13)C,(2)H(3)-methyl]methionine. The rate of homocysteine remethylation was highest in maternal liver and declined as gestation progressed. Diets deficient in folic acid and choline reduced the production of methionine from homocysteine in maternal liver only in the animals fed a methionine-limited diet. Throughout gestation, the pancreas exported homocysteine for methylation within other tissues. Little or no methionine cycle activity was detected in the placenta at days 19 and 21 of gestation, but, during this period, fetal tissues, especially the liver, synthesized methionine from homocysteine. Greater enrichment of homocysteine in maternal plasma than placenta, even in animals fed the most-deficient diets, shows that the placenta did not contribute homocysteine to maternal plasma. Methionine synthesis from homocysteine in fetal tissues was maintained or increased when the dams were fed folate- and choline-deficient methionine-restricted diets. This study shows that methyl-deficient diets decrease the remethylation of homocysteine within maternal tissues but that these rates are protected to some extent within fetal tissues.
- Published
- 2012
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48. Resource partitioning in relation to cohabitation of Lactobacillus species in the mouse forestomach.
- Author
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Tannock GW, Wilson CM, Loach D, Cook GM, Eason J, O'Toole PW, Holtrop G, and Lawley B
- Subjects
- Animals, Culture Media metabolism, DNA, Bacterial genetics, Fermentation, Gastrointestinal Contents chemistry, Germ-Free Life, Lactobacillus genetics, Lactobacillus metabolism, Limosilactobacillus reuteri genetics, Limosilactobacillus reuteri metabolism, Mice, Mice, Inbred BALB C, Models, Theoretical, Oligonucleotide Array Sequence Analysis, Phylogeny, Transcriptome, Glucose metabolism, Lactobacillus growth & development, Limosilactobacillus reuteri growth & development, Maltose metabolism, Stomach microbiology
- Abstract
Phylogenetic analysis of gut communities of vertebrates is advanced, but the relationships, especially at the trophic level, between commensals that share gut habitats of monogastric animals have not been investigated to any extent. Lactobacillus reuteri strain 100-23 and Lactobacillus johnsonii strain 100-33 cohabit in the forestomach of mice. According to the niche exclusion principle, this should not be possible because both strains can utilise the two main fermentable carbohydrates present in the stomach digesta: glucose and maltose. We show, based on gene transcription analysis, in vitro physiological assays, and in vivo experiments that the two strains can co-exist in the forestomach habitat because 100-23 grows more rapidly using maltose, whereas 100-33 preferentially utilises glucose. Mutation of the maltose phosphorylase gene (malA) of strain 100-23 prevented its growth on maltose-containing culture medium, and resulted in the numerical dominance of 100-33 in the forestomach. The fundamental niche of L. reuteri 100-23 in the mouse forestomach can be defined in terms of 'glucose and maltose trophism'. However, its realised niche when L. johnsonii 100-33 is present is 'maltose trophism'. Hence, nutritional adaptations provide niche differentiation that assists cohabitation by the two strains through resource partitioning in the mouse forestomach. This real life, trophic phenomenon conforms to a mathematical model based on in vitro bacterial doubling times, in vitro transport rates, and concentrations of maltose and glucose in mouse stomach digesta.
- Published
- 2012
- Full Text
- View/download PDF
49. Rates of production and utilization of lactate by microbial communities from the human colon.
- Author
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Belenguer A, Holtrop G, Duncan SH, Anderson SE, Calder AG, Flint HJ, and Lobley GE
- Subjects
- Adult, Butyrates metabolism, Carbon Isotopes analysis, Colon metabolism, Fatty Acids, Volatile metabolism, Feces microbiology, Female, Humans, Male, Middle Aged, Models, Chemical, Starch metabolism, Bacteria metabolism, Colon microbiology, Fermentation, Lactic Acid metabolism
- Abstract
Lactate metabolism was studied in mixed bacterial communities using single-stage continuous flow fermentors inoculated with faecal slurries from four different volunteers and run for 6 days at pH 5.5 and 6.0, using carbohydrates, mainly starch, as substrates. A continuous infusion of [U-(13) C]starch and l-[3-(13) C]lactate was performed on day 5 and a bolus injection of l-[3-(13) C]lactate plus dl-lactate on day 6. Short-chain fatty acids and lactate concentrations plus enrichments and numbers of lactate-producing and -utilizing bacteria on day 5 were measured. Faecal samples were also collected weekly over a 3-month period to inoculate 24-h batch culture incubation at pH 5.9 and 6.5 with carbohydrates alone or with 35 mmol L(-1) lactate. In the fermentors, the potential lactate disposal rates were more than double the formation rates, and lactate concentrations usually remained below detection. Lactate formation was greater (P<0.05) at the lower pH, with a similar tendency for utilization. Up to 20% of butyrate production was derived from lactate. In batch cultures, lactate was also efficiently used at both pH values, especially at 6.5, although volunteer and temporal variability existed. Under healthy gut environmental conditions, bacterial lactate disposal seems to exceed production markedly., (© 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
50. Bayesian analysis of non-linear differential equation models with application to a gut microbial ecosystem.
- Author
-
Lawson DJ, Holtrop G, and Flint H
- Subjects
- Bacteria classification, Bayes Theorem, Humans, Markov Chains, Monte Carlo Method, Ecosystem, Gastrointestinal Tract microbiology, Models, Biological, Nonlinear Dynamics
- Abstract
Process models specified by non-linear dynamic differential equations contain many parameters, which often must be inferred from a limited amount of data. We discuss a hierarchical Bayesian approach combining data from multiple related experiments in a meaningful way, which permits more powerful inference than treating each experiment as independent. The approach is illustrated with a simulation study and example data from experiments replicating the aspects of the human gut microbial ecosystem. A predictive model is obtained that contains prediction uncertainty caused by uncertainty in the parameters, and we extend the model to capture situations of interest that cannot easily be studied experimentally., (Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2011
- Full Text
- View/download PDF
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