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92,295 results on '"Hodges A"'

1. Preferential Occurrence of Fast Radio Bursts in Massive Star-Forming Galaxies

Author

Sharma, Kritti, Ravi, Vikram, Connor, Liam, Law, Casey, Ocker, Stella Koch, Sherman, Myles, Kosogorov, Nikita, Faber, Jakob, Hallinan, Gregg, Harnach, Charlie, Hellbourg, Greg, Hobbs, Rick, Hodge, David, Hodges, Mark, Lamb, James, Rasmussen, Paul, Somalwar, Jean, Weinreb, Sander, Woody, David, Leja, Joel, Anand, Shreya, Das, Kaustav Kashyap, Qin, Yu-Jing, Rose, Sam, Dong, Dillon Z., Miller, Jessie, and Yao, Yuhan

Subjects
Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Astrophysics of Galaxies
Abstract

Fast Radio Bursts (FRBs) are millisecond-duration events detected from beyond the Milky Way. FRB emission characteristics favor highly magnetized neutron stars, or magnetars, as the sources, as evidenced by FRB-like bursts from a galactic magnetar, and the star-forming nature of FRB host galaxies. However, the processes that produce FRB sources remain unknown. Although galactic magnetars are often linked to core-collapse supernovae (CCSNe), it's uncertain what determines which supernovae result in magnetars. The galactic environments of FRB sources can be harnessed to probe their progenitors. Here, we present the stellar population properties of 30 FRB host galaxies discovered by the Deep Synoptic Array. Our analysis shows a significant deficit of low-mass FRB hosts compared to the occurrence of star-formation in the universe, implying that FRBs are a biased tracer of star-formation, preferentially selecting massive star-forming galaxies. This bias may be driven by galaxy metallicity, which is positively correlated with stellar mass. Metal-rich environments may favor the formation of magnetar progenitors through stellar mergers, as higher metallicity stars are less compact and more likely to fill their Roche lobes, leading to unstable mass transfer. Although massive stars do not have convective interiors to generate strong magnetic fields by dynamo, merger remnants are thought to have the requisite internal magnetic-field strengths to result in magnetars. The preferential occurrence of FRBs in massive star-forming galaxies suggests that CCSN of merger remnants preferentially forms magnetars., Comment: Accepted for publication in Nature. The final version will be published by the journal

Published
2024

2. A gas rich cosmic web revealed by partitioning the missing baryons

Author

Connor, Liam, Ravi, Vikram, Sharma, Kritti, Ocker, Stella Koch, Faber, Jakob, Hallinan, Gregg, Harnach, Charlie, Hellbourg, Greg, Hobbs, Rick, Hodge, David, Hodges, Mark, Kosogorov, Nikita, Lamb, James, Law, Casey, Rasmussen, Paul, Sherman, Myles, Somalwar, Jean, Weinreb, Sander, and Woody, David

Subjects
Astrophysics - Cosmology and Nongalactic Astrophysics, Astrophysics - Astrophysics of Galaxies, Astrophysics - High Energy Astrophysical Phenomena
Abstract

Approximately half of the Universe's dark matter resides in collapsed halos; significantly less than half of the baryonic matter (protons and neutrons) remains confined to halos. A small fraction of baryons are in stars and the interstellar medium within galaxies. The lion's share are diffuse (less than $10^{-3}$ cm$^{-3}$) and ionized (neutral fraction less than $10^{-4}$), located in the intergalactic medium (IGM) and in the halos of galaxy clusters, groups, and galaxies. The quantity and spatial distribution of this diffuse ionized gas is notoriously difficult to measure, but has wide implications for galaxy formation, astrophysical feedback, and precision cosmology. Recently, the dispersion of extragalactic Fast Radio Bursts (FRBs) has been used to measure the total content of cosmic baryons. However, past efforts had modest samples and methods that cannot discriminate between IGM and halo gas, which is critical for studying feedback and for observational cosmology. Here, we present a large cosmological sample of FRB sources localized to their host galaxies. We have robustly partitioned the missing baryons into the IGM, galaxy clusters, and galaxies, providing a late-Universe measurement of the total baryon density of $\Omega_b h_{70}$=0.049$\pm$0.003. Our results indicate efficient feedback processes that can expel gas from galaxy halos and into the intergalactic medium, agreeing with the enriched cosmic web scenario seen in cosmological simulations. The large diffuse baryon fraction that we have measured disfavours bottom-heavy stellar initial mass functions, which predict a large total stellar density, $\Omega_*$.

Published
2024

3. Measurement of elliptic flow of J$/\psi$ in $\sqrt{s_{_{NN}}}=200$ GeV Au$+$Au collisions at forward rapidity

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Adare, A., Aidala, C., Ajitanand, N. N., Akiba, Y., Alfred, M., Antsupov, S., Aoki, K., Apadula, N., Asano, H., Ayuso, C., Azmoun, B., Babintsev, V., Bai, M., Bandara, N. S., Bannier, B., Bannikov, E., Barish, K. N., Bathe, S., Bazilevsky, A., Beaumier, M., Beckman, S., Belmont, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Blankenship, B., Blau, D. S., Boer, M., Bok, J. S., Borisov, V., Boyle, K., Brooks, M. L., Bryslawskyj, J., Bumazhnov, V., Butler, C., Campbell, S., Roman, V. Canoa, Chen, C. -H., Chen, D., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Chujo, T., Citron, Z., Connors, M., Corliss, R., Csanád, M., Csörgő, T., Liu, L. D., Danley, T. W., Datta, A., Daugherity, M. S., David, G., DeBlasio, K., Dehmelt, K., Denisov, A., Deshpande, A., Desmond, E. J., Dion, A., Diss, P. B., Doomra, V., Do, J. H., Drees, A., Drees, K. A., Dumancic, M., Durham, J. M., Durum, A., Elder, T., Enokizono, A., Esha, R., Fadem, B., Fan, W., Feege, N., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fokin, S. L., Frantz, J. E., Franz, A., Frawley, A. D., Fukuda, Y., Gallus, P., Gal, C., Garg, P., Ge, H., Giordano, F., Glenn, A., Goto, Y., Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Guo, T., Hachiya, T., Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hamilton, H. F., Hanks, J., Han, S. Y., Hasegawa, S., Haseler, T. O. S., Hashimoto, K., Hemmick, T. K., He, X., Hill, J. C., Hill, K., Hodges, A., Hollis, R. S., Homma, K., Hong, B., Hoshino, T., Hotvedt, N., Huang, J., Imai, K., Imrek, J., Inaba, M., Iordanova, A., Isenhower, D., Ito, Y., Ivanishchev, D., Jacak, B., Jezghani, M., Jiang, X., Ji, Z., Johnson, B. M., Jorjadze, V., Jouan, D., Jumper, D. S., Kanda, S., Kang, J. H., Kapukchyan, D., Karthas, S., Kawall, D., Kazantsev, A. V., Key, J. A., Khachatryan, V., Khanzadeev, A., Kimelman, B., Kim, C., Kim, D. J., Kim, E. -J., Kim, G. W., Kim, M., Kim, M. H., Kincses, D., Kistenev, E., Kitamura, R., Klatsky, J., Kleinjan, D., Kline, P., Koblesky, T., Komkov, B., Kotov, D., Kovacs, L., Kudo, S., Kurita, K., Kurosawa, M., Kwon, Y., Lajoie, J. G., Lallow, E. O., Lebedev, A., Lee, S., Lee, S. H., Leitch, M. J., Leung, Y. H., Lewis, N. A., Lim, S. H., Liu, M. X., Li, X., Loggins, V. -R., Lökös, S., Loomis, D. A., Lynch, D., Majoros, T., Makdisi, Y. I., Makek, M., Malaev, M., Manion, A., Manko, V. I., Mannel, E., Masuda, H., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Meles, A., Mendoza, M., Mignerey, A. C., Mihalik, D. E., Milov, A., Mishra, D. K., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Mitsuka, G., Miyasaka, S., Mizuno, S., Mohanty, A. K., Montuenga, P., Moon, T., Morrison, D. P., Morrow, S. I., Moukhanova, T. V., Mulilo, B., Murakami, T., Murata, J., Mwai, A., Nagai, K., Nagashima, K., Nagashima, T., Nagle, J. L., Nagy, M. I., Nakagawa, I., Nakagomi, H., Nakano, K., Nattrass, C., Netrakanti, P. K., Niida, T., Nishimura, S., Nouicer, R., Novitzky, N., Novotny, R., Novák, T., Nukazuka, G., Nyanin, A. S., O'Brien, E., Ogilvie, C. A., Koop, J. D. Orjuela, Orosz, M., Osborn, J. D., Oskarsson, A., Ozawa, K., Pak, R., Pantuev, V., Papavassiliou, V., Park, J. S., Park, S., Patel, M., Pate, S. F., Peng, J. -C., Peng, W., Perepelitsa, D. V., Perera, G. D. N., Peressounko, D. Yu., PerezLara, C. E., Perry, J., Petti, R., Phipps, M., Pinkenburg, C., Pinson, R., Pisani, R. P., Potekhin, M., Pun, A., Purschke, M. L., Rak, J., Ramson, B. J., Ravinovich, I., Read, K. F., Reynolds, D., Riabov, V., Riabov, Y., Richford, D., Rinn, T., Rolnick, S. D., Rosati, M., Rowan, Z., Rubin, J. G., Runchey, J., Sahlmueller, B., Saito, N., Sakaguchi, T., Sako, H., Samsonov, V., Sarsour, M., Sato, K., Sato, S., Schaefer, B., Schmoll, B. K., Sedgwick, K., Seidl, R., Seleznev, A., Sen, A., Seto, R., Sett, P., Sexton, A., Sharma, D., Shein, I., Shibata, T. -A., Shigaki, K., Shimomura, M., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Singh, B. K., Singh, C. P., Singh, V., Slunečka, M., Smith, K. L., Snowball, M., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Stankus, P. W., Stepanov, M., Stoll, S. P., Sugitate, T., Sukhanov, A., Sumita, T., Sun, J., Sun, Z., Syed, S., Sziklai, J., Takeda, A., Taketani, A., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Taranenko, A., Tarnai, G., Tieulent, R., Timilsina, A., Todoroki, T., Tomášek, M., Towell, C. L., Towell, R., Towell, R. S., Tserruya, I., Ueda, Y., Ujvari, B., van Hecke, H. W., Vazquez-Carson, S., Velkovska, J., Virius, M., Vrba, V., Wang, X. R., Wang, Z., Watanabe, Y., Watanabe, Y. S., Wei, F., White, A. S., Wong, C. P., Woody, C. L., Wysocki, M., Xia, B., Xue, L., Xu, C., Xu, Q., Yalcin, S., Yamaguchi, Y. L., Yanovich, A., Yin, P., Yoon, I., Yoo, J. H., Yushmanov, I. E., Yu, H., Zajc, W. A., Zelenski, A., Zhou, S., and Zou, L.

Subjects
Nuclear Experiment
Abstract

We report the first measurement of the azimuthal anisotropy of J$/\psi$ at forward rapidity ($1.2<|\eta|<2.2$) in Au$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV at the Relativistic Heavy Ion Collider. The data were collected by the PHENIX experiment in 2014 and 2016 with integrated luminosity of 14.5~nb$^{-1}$. The second Fourier coefficient ($v_2$) of the azimuthal distribution of $J/\psi$ is determined as a function of the transverse momentum ($p_T$) using the event-plane method. The measurements were performed for several selections of collision centrality: 0\%--50\%, 10\%--60\%, and 10\%-40\%. We find that in all cases the values of $v_2(p_T)$, which quantify the elliptic flow of J$/\psi$, are consistent with zero. The results are consistent with measurements at midrapidity, indicating no significant elliptic flow of the J$/\psi$ within the quark-gluon-plasma medium at collision energies of $\sqrt{s_{_{NN}}}=200$ GeV., Comment: 369 authors from 72 institutions, 12 pages, 7 figures, 5 tables. v1 is version submitted to Physical Review C. HEPdata tables for the points plotted in figures for this and previous PHENIX publications are (or will be) publicly available at http://www.phenix.bnl.gov/papers.html

Published
2024

4. Measurements at forward rapidity of elliptic flow of charged hadrons and open-heavy-flavor muons in Au$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Adare, A., Aidala, C., Ajitanand, N. N., Akiba, Y., Alfred, M., Antsupov, S., Aoki, K., Apadula, N., Asano, H., Ayuso, C., Azmoun, B., Babintsev, V., Bai, M., Bandara, N. S., Bannier, B., Bannikov, E., Barish, K. N., Bathe, S., Bazilevsky, A., Beaumier, M., Beckman, S., Belmont, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Blankenship, B., Blau, D. S., Boer, M., Bok, J. S., Borisov, V., Boyle, K., Brooks, M. L., Bryslawskyj, J., Bumazhnov, V., Butler, C., Campbell, S., Roman, V. Canoa, Chen, C. -H., Chen, D., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Chujo, T., Citron, Z., Connors, M., Corliss, R., Csanád, M., Csörgő, T., Liu, L. D., Danley, T. W., Datta, A., Daugherity, M. S., David, G., DeBlasio, K., Dehmelt, K., Denisov, A., Deshpande, A., Desmond, E. J., Dion, A., Diss, P. B., Doomra, V., Do, J. H., Drees, A., Drees, K. A., Dumancic, M., Durham, J. M., Durum, A., Elder, T., Enokizono, A., Esha, R., Fadem, B., Fan, W., Feege, N., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fokin, S. L., Frantz, J. E., Franz, A., Frawley, A. D., Fukuda, Y., Gallus, P., Gal, C., Garg, P., Ge, H., Giordano, F., Glenn, A., Goto, Y., Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Guo, T., Hachiya, T., Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hamilton, H. F., Hanks, J., Han, S. Y., Hasegawa, S., Haseler, T. O. S., Hashimoto, K., Hemmick, T. K., He, X., Hill, J. C., Hill, K., Hodges, A., Hollis, R. S., Homma, K., Hong, B., Hoshino, T., Hotvedt, N., Huang, J., Imai, K., Imrek, J., Inaba, M., Iordanova, A., Isenhower, D., Ito, Y., Ivanishchev, D., Jacak, B., Jezghani, M., Jiang, X., Ji, Z., Johnson, B. M., Jorjadze, V., Jouan, D., Jumper, D. S., Kanda, S., Kang, J. H., Kapukchyan, D., Karthas, S., Kawall, D., Kazantsev, A. V., Key, J. A., Khachatryan, V., Khanzadeev, A., Kimelman, B., Kim, C., Kim, D. J., Kim, E. -J., Kim, G. W., Kim, M., Kim, M. H., Kincses, D., Kistenev, E., Kitamura, R., Klatsky, J., Kleinjan, D., Kline, P., Koblesky, T., Komkov, B., Kotov, D., Kovacs, L., Kudo, S., Kurita, K., Kurosawa, M., Kwon, Y., Lajoie, J. G., Lallow, E. O., Lebedev, A., Lee, S., Lee, S. H., Leitch, M. J., Leung, Y. H., Lewis, N. A., Lim, S. H., Liu, M. X., Li, X., Loggins, V. -R., Lökös, S., Loomis, D. A., Lynch, D., Majoros, T., Makdisi, Y. I., Makek, M., Malaev, M., Manion, A., Manko, V. I., Mannel, E., Masuda, H., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Meles, A., Mendoza, M., Mignerey, A. C., Mihalik, D. E., Milov, A., Mishra, D. K., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Mitsuka, G., Miyasaka, S., Mizuno, S., Mohanty, A. K., Montuenga, P., Moon, T., Morrison, D. P., Morrow, S. I., Moukhanova, T. V., Mulilo, B., Murakami, T., Murata, J., Mwai, A., Nagai, K., Nagashima, K., Nagashima, T., Nagle, J. L., Nagy, M. I., Nakagawa, I., Nakagomi, H., Nakano, K., Nattrass, C., Netrakanti, P. K., Niida, T., Nishimura, S., Nouicer, R., Novitzky, N., Novotny, R., Novák, T., Nukazuka, G., Nyanin, A. S., O'Brien, E., Ogilvie, C. A., Koop, J. D. Orjuela, Orosz, M., Osborn, J. D., Oskarsson, A., Ozawa, K., Pak, R., Pantuev, V., Papavassiliou, V., Park, J. S., Park, S., Patel, M., Pate, S. F., Peng, J. -C., Peng, W., Perepelitsa, D. V., Perera, G. D. N., Peressounko, D. Yu., PerezLara, C. E., Perry, J., Petti, R., Phipps, M., Pinkenburg, C., Pinson, R., Pisani, R. P., Potekhin, M., Pun, A., Purschke, M. L., Rak, J., Ramson, B. J., Ravinovich, I., Read, K. F., Reynolds, D., Riabov, V., Riabov, Y., Richford, D., Rinn, T., Rolnick, S. D., Rosati, M., Rowan, Z., Rubin, J. G., Runchey, J., Sahlmueller, B., Saito, N., Sakaguchi, T., Sako, H., Samsonov, V., Sarsour, M., Sato, K., Sato, S., Schaefer, B., Schmoll, B. K., Sedgwick, K., Seidl, R., Seleznev, A., Sen, A., Seto, R., Sett, P., Sexton, A., Sharma, D., Shein, I., Shibata, T. -A., Shigaki, K., Shimomura, M., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Singh, B. K., Singh, C. P., Singh, V., Slunečka, M., Smith, K. L., Snowball, M., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Stankus, P. W., Stepanov, M., Stoll, S. P., Sugitate, T., Sukhanov, A., Sumita, T., Sun, J., Sun, Z., Syed, S., Sziklai, J., Takeda, A., Taketani, A., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Taranenko, A., Tarnai, G., Tieulent, R., Timilsina, A., Todoroki, T., Tomášek, M., Towell, C. L., Towell, R., Towell, R. S., Tserruya, I., Ueda, Y., Ujvari, B., van Hecke, H. W., Vazquez-Carson, S., Velkovska, J., Virius, M., Vrba, V., Wang, X. R., Wang, Z., Watanabe, Y., Watanabe, Y. S., Wei, F., White, A. S., Wong, C. P., Woody, C. L., Wysocki, M., Xia, B., Xue, L., Xu, C., Xu, Q., Yalcin, S., Yamaguchi, Y. L., Yanovich, A., Yin, P., Yoon, I., Yoo, J. H., Yushmanov, I. E., Yu, H., Zajc, W. A., Zelenski, A., Zhou, S., and Zou, L.

Subjects
Nuclear Experiment
Abstract

We present the first forward-rapidity measurements of elliptic anisotropy of open-heavy-flavor muons at the BNL Relativistic Heavy Ion Collider. The measurements are based on data samples of Au$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV collected by the PHENIX experiment in 2014 and 2016 with integrated luminosity of 14.5~nb$^{-1}$. The measurements are performed in the pseudorapidity range $1.2<|\eta|<2$ and cover transverse momenta $1

Published
2024

5. Multiplicity dependent $J/\psi$ and $\psi(2S)$ production at forward and backward rapidity in $p$$+$$p$ collisions at $\sqrt{s}=200$ GeV

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Aidala, C., Akiba, Y., Alfred, M., Andrieux, V., Antsupov, S., Apadula, N., Asano, H., Azmoun, B., Babintsev, V., Bandara, N. S., Bannikov, E., Barish, K. N., Bathe, S., Bazilevsky, A., Beaumier, M., Belmont, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Blankenship, B., Blau, D. S., Bok, J. S., Borisov, V., Brooks, M. L., Bryslawskyj, J., Bumazhnov, V., Campbell, S., Cervantes, R., Chen, D., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Citron, Z., Connors, M., Corliss, R., Cronin, N., Csanád, M., Csörgő, T., Danley, T. W., Daugherity, M. S., David, G., DeBlasio, K., Dehmelt, K., Denisov, A., Deshpande, A., Desmond, E. J., Dion, A., Dixit, D., Doomra, V., Do, J. H., Drees, A., Drees, K. A., Durham, J. M., Durum, A., En'yo, H., Enokizono, A., Esha, R., Fadem, B., Fan, W., Feege, N., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fokin, S. L., Frantz, J. E., Franz, A., Frawley, A. D., Fukuda, Y., Gallus, P., Gal, C., Garg, P., Ge, H., Giordano, F., Goto, Y., Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Guo, T., Guragain, H., Hachiya, T., Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hamilton, H. F., Hanks, J., Han, S. Y., Hasegawa, S., Haseler, T. O. S., Hemmick, T. K., He, X., Hill, J. C., Hill, K., Hodges, A., Hollis, R. S., Homma, K., Hong, B., Hoshino, T., Hotvedt, N., Huang, J., Imai, K., Inaba, M., Iordanova, A., Isenhower, D., Ivanishchev, D., Jacak, B., Jezghani, M., Jiang, X., Ji, Z., Johnson, B. M., Jouan, D., Jumper, D. S., Kang, J. H., Kapukchyan, D., Karthas, S., Kawall, D., Kazantsev, A. V., Khachatryan, V., Khanzadeev, A., Kim, C., Kim, E. -J., Kim, M., Kincses, D., Kistenev, E., Klatsky, J., Kline, P., Koblesky, T., Kotov, D., Kovacs, L., Kudo, S., Kurita, K., Kwon, Y., Lajoie, J. G., Lebedev, A., Lee, S., Leitch, M. J., Leung, Y. H., Lim, S. H., Liu, M. X., Li, X., Loggins, V. -R., Lökös, S., Loomis, D. A., Lovasz, K., Lynch, D., Majoros, T., Makdisi, Y. I., Makek, M., Manko, V. I., Mannel, E., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Mendoza, M., Mignerey, A. C., Milov, A., Mishra, D. K., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Mitsuka, G., Miyasaka, S., Mizuno, S., Montuenga, P., Moon, T., Morrison, D. P., Mulilo, B., Murakami, T., Murata, J., Nagai, K., Nagashima, K., Nagashima, T., Nagle, J. L., Nagy, M. I., Nakagawa, I., Nakano, K., Nattrass, C., Niida, T., Nouicer, R., Novitzky, N., Novák, T., Nukazuka, G., Nyanin, A. S., O'Brien, E., Ogilvie, C. A., Koop, J. D. Orjuela, Orosz, M., Osborn, J. D., Oskarsson, A., Ottino, G. J., Ozawa, K., Pantuev, V., Papavassiliou, V., Park, J. S., Park, S., Patel, M., Pate, S. F., Perepelitsa, D. V., Perera, G. D. N., Peressounko, D. Yu., PerezLara, C. E., Perry, J., Petti, R., Phipps, M., Pinkenburg, C., Pisani, R. P., Potekhin, M., Purschke, M. L., Read, K. F., Reynolds, D., Riabov, V., Riabov, Y., Richford, D., Rinn, T., Rolnick, S. D., Rosati, M., Rowan, Z., Safonov, A. S., Sakaguchi, T., Sako, H., Samsonov, V., Sarsour, M., Sato, S., Schaefer, B., Schmoll, B. K., Sedgwick, K., Seidl, R., Seleznev, A., Sen, A., Seto, R., Sexton, A., Sharma, D., Shein, I., Shibata, T. -A., Shigaki, K., Shimomura, M., Shioya, T., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Singh, B. K., Singh, C. P., Singh, V., Slunečka, M., Smith, K. L., Snowball, M., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Stankus, P. W., Stoll, S. P., Sugitate, T., Sukhanov, A., Sumita, T., Sun, J., Sun, Z., Sziklai, J., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Tarnai, G., Tieulent, R., Timilsina, A., Todoroki, T., Tomášek, M., Towell, C. L., Towell, R. S., Tserruya, I., Ueda, Y., Ujvari, B., van Hecke, H. W., Velkovska, J., Virius, M., Vrba, V., Vukman, N., Wang, X. R., Watanabe, Y. S., Woody, C. L., Xue, L., Xu, C., Xu, Q., Yalcin, S., Yamaguchi, Y. L., Yamamoto, H., Yanovich, A., Yoon, I., Yoo, J. H., Yushmanov, I. E., Yu, H., Zajc, W. A., Zelenski, A., and Zou, L.

Subjects
High Energy Physics - Experiment
Abstract

The $J/\psi$ and $\psi(2S)$ charmonium states, composed of $c\bar{c}$ quark pairs and known since the 1970s, are widely believed to serve as ideal probes to test quantum chromodynamics in high-energy hadronic interactions. However, there is not yet a complete understanding of the charmonium-production mechanism. Recent measurements of $J/\psi$ production as a function of event charged-particle multiplicity at the collision energies of both the Large Hadron Collider (LHC) and the Relativistic Heavy Ion Collider (RHIC) show enhanced $J/\psi$ production yields with increasing multiplicity. One potential explanation for this type of dependence is multiparton interactions (MPI). We carry out the first measurements of self-normalized $J/\psi$ yields and the $\psi(2S)$ to $J/\psi$ ratio at both forward and backward rapidities as a function of self-normalized charged-particle multiplicity in $p$$+$$p$ collisions at $\sqrt{s}=200$ GeV. In addition, detailed {\sc pythia} studies tuned to RHIC energies were performed to investigate the MPI impacts. We find that the PHENIX data at RHIC are consistent with recent LHC measurements and can only be described by {\sc pythia} calculations that include MPI effects. The forward and backward $\psi(2S)$ to $J/\psi$ ratio, which serves as a unique and powerful approach to study final-state effects on charmonium production, is found to be less dependent on the charged-particle multiplicity., Comment: 301 authors from 69 institutions, 8 pages, 3 figures. v1 is version submitted to Physical Review D Letters. HEPdata tables for the points plotted in figures for this and previous PHENIX publications are (or will be) publicly available at http://www.phenix.bnl.gov/papers.html

Published
2024

6. Evidence for a Fast Soft X-ray Wind in M82 from XMM-RGS

Author

Boettcher, Erin and Hodges-Kluck, Edmund

Subjects
Astrophysics - Astrophysics of Galaxies, Astrophysics - High Energy Astrophysical Phenomena
Abstract

Starburst wind models predict that metals and energy are primarily carried out of the disk by hot gas ($T > 10^{6}$ K), but the low energy resolution of X-ray CCD observations results in large uncertainties on the mass and energy loading. Here, we present evidence for a fast soft X-ray wind from the prototypical starburst galaxy M82 using deep archival observations from the Reflection Grating Spectrometer on XMM-Newton. After characterizing the complex line-spread function for the spatially extended outflow ($\approx 4'$), we perform emission-line fitting to measure the velocity dispersion, $\sigma_{\text{v}}$, from OVIII (0.65, 0.77 keV), NeX (1.02 keV), and MgXII (1.47 keV). For the $T \approx 3 \times 10^{6}$ K gas, OVIII yields a velocity dispersion of $\sigma_{\text{v}} = 1160^{+100}_{-90}$ km s$^{-1}$, implying a wind speed that is significantly above the escape velocity ($v_{\text{esc}} \lesssim 450$ km s$^{-1}$). NeX ($\sigma_{\text{v}} = 550^{+130}_{-150}$ km s$^{-1}$) and MgXII ($\sigma_{\text{v}} < 370$ km s$^{-1}$) show less velocity broadening than OVIII, hinting at a lower wind speed or smaller opening angle on the more compact spatial scales traced by the $T \approx (0.6 - 1) \times 10^{7}$ K gas. Alternatively, these higher energy emission lines may be dominated by shock-heated gas in the interstellar medium. Future synthesis of these measurements with Performance Verification observations of the $E = 2 - 12$ keV wind in M82 from the Resolve microcalorimeter on the X-ray Imaging and Spectroscopy Mission will inform the phase structure and energy budget of the hot starburst wind., Comment: Accepted for publication in ApJ. 17 pages, 8 figures, 3 tables

Published
2024

7. Illuminating the Incidence of Extraplanar Dust Using Ultraviolet Reflection Nebulae with GALEX

Author

Boettcher, Erin and Hodges-Kluck, Edmund

Subjects
Astrophysics - Astrophysics of Galaxies
Abstract

Circumgalactic dust grains trace the circulation of mass and metals between star-forming regions and gaseous galactic halos, giving insight into feedback and tidal stripping processes. We perform a search for ultraviolet (UV) reflection nebulae produced by extraplanar dust around 551 nearby ($D < 100$ Mpc), edge-on disk galaxies using archival near-UV (NUV) and far-UV (FUV) images from GALEX, accounting for the point-spread function (FWHM $= 4''-5''$). We detect extraplanar emission ubiquitously in stacks of galaxies binned by morphology and star-formation rate, with scale heights of $h_{\text{h}} = 1 - 2.3$ kpc and $\approx 10\%$ of the total (reddened) flux in the galaxy found beyond the B-band isophotal level of $\mu_{\text{B}} = 25$ mag arcsec$^{-2}$. This emission is detected in $7\%$ of the individual galaxies, and an additional one third have at least $5\%$ of their total flux found beyond $\mu_{\text{B}} = 25$ mag arcsec$^{-2}$ in a disk component. The extraplanar luminosities and colors are consistent with reflection nebulae rather than stellar halos and indicate that, on average, disk galaxies have an extraplanar dust mass of $5\% - 15\%$ of that in their interstellar medium. This suggests that recycled material composes at least a third of the inner circumgalactic medium ($R < 10$ kpc) in $\sim L^{*}$ galaxies., Comment: Accepted for publication in ApJ. 34 pages, 17 figures, 4 tables

Published
2024

8. Measurement of inclusive jet cross section and substructure in $p$$+$$p$ collisions at $\sqrt{s_{_{NN}}}=200$ GeV

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Aidala, C., Ajitanand, N. N., Akiba, Y., Akimoto, R., Alexander, J., Alfred, M., Andrieux, V., Antsupov, S., Aoki, K., Apadula, N., Asano, H., Atomssa, E. T., Awes, T. C., Azmoun, B., Babintsev, V., Bai, M., Bai, X., Bandara, N. S., Bannier, B., Bannikov, E., Barish, K. N., Bathe, S., Baublis, V., Baumann, C., Baumgart, S., Bazilevsky, A., Beaumier, M., Belmont, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Black, D., Blankenship, B., Blau, D. S., Bok, J. S., Borisov, V., Boyle, K., Brooks, M. L., Bryslawskyj, J., Buesching, H., Bumazhnov, V., Butsyk, S., Campbell, S., Cervantes, R., Chen, C. -H., Chen, D., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Choi, S., Christiansen, P., Chujo, T., Cianciolo, V., Citron, Z., Cole, B. A., Connors, M., Corliss, R., Cronin, N., Crossette, N., Csanád, M., Csörgő, T., D'Orazio, L., Danley, T. W., Datta, A., Daugherity, M. S., David, G., DeBlasio, K., Dehmelt, K., Denisov, A., Deshpande, A., Desmond, E. J., Ding, L., Dion, A., Dixit, D., Doomra, V., Do, J. H., Drapier, O., Drees, A., Drees, K. A., Durham, J. M., Durum, A., En'yo, H., Engelmore, T., Enokizono, A., Esha, R., Eyser, K. O., Fadem, B., Fan, W., Feege, N., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fleuret, F., Fokin, S. L., Frantz, J. E., Franz, A., Frawley, A. D., Fukao, Y., Fukuda, Y., Fusayasu, T., Gainey, K., Gallus, P., Gal, C., Garg, P., Garishvili, A., Garishvili, I., Ge, H., Giordano, F., Glenn, A., Gong, X., Gonin, M., Goto, Y., de Cassagnac, R. Granier, Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Guo, T., Guragain, H., Gu, Y., Hachiya, T., Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hamilton, H. F., Hanks, J., Han, S. Y., Hasegawa, S., Haseler, T. O. S., Hashimoto, K., Hayano, R., Hemmick, T. K., Hester, T., He, X., Hill, J. C., Hill, K., Hodges, A., Hollis, R. S., Homma, K., Hong, B., Hoshino, T., Hotvedt, N., Huang, J., Ichihara, T., Ikeda, Y., Imai, K., Imazu, Y., Inaba, M., Iordanova, A., Isenhower, D., Isinhue, A., Ivanishchev, D., Jeon, S. J., Jezghani, M., Jiang, X., Ji, Z., Johnson, B. M., Joo, K. S., Jouan, D., Jumper, D. S., Kamin, J., Kanda, S., Kang, B. H., Kang, J. H., Kang, J. S., Kapukchyan, D., Kapustinsky, J., Karthas, S., Kawall, D., Kazantsev, A. V., Key, J. A., Khachatryan, V., Khandai, P. K., Khanzadeev, A., Kijima, K. M., Kim, C., Kim, D. J., Kim, E. -J., Kim, M., Kim, Y. -J., Kim, Y. K., Kincses, D., Kistenev, E., Klatsky, J., Kleinjan, D., Kline, P., Koblesky, T., Kofarago, M., Komkov, B., Koster, J., Kotchetkov, D., Kotov, D., Kovacs, L., Krizek, F., Kudo, S., Kurita, K., Kurosawa, M., Kwon, Y., Lai, Y. S., Lajoie, J. G., Lebedev, A., Lee, D. M., Lee, G. H., Lee, J., Lee, K. B., Lee, K. S., Lee, S., Lee, S. H., Leitch, M. J., Leitgab, M., Leung, Y. H., Lewis, B., Lim, S. H., Liu, M. X., Li, X., Loggins, V. -R., Lokos, S., Loomis, D. A., Lovasz, K., Lynch, D., Maguire, C. F., Majoros, T., Makdisi, Y. I., Makek, M., Manion, A., Manko, V. I., Mannel, E., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Meles, A., Mendoza, M., Meredith, B., Miake, Y., Mibe, T., Mignerey, A. C., Milov, A., Mishra, D. K., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Mitsuka, G., Miyasaka, S., Mizuno, S., Mohanty, A. K., Mohapatra, S., Montuenga, P., Moon, T., Morrison, D. P., Moskowitz, M., Moukhanova, T. V., Mulilo, B., Murakami, T., Murata, J., Mwai, A., Nagae, T., Nagai, K., Nagamiya, S., Nagashima, K., Nagashima, T., Nagle, J. L., Nagy, M. I., Nakagawa, I., Nakamiya, Y., Nakamura, K. R., Nakamura, T., Nakano, K., Nattrass, C., Netrakanti, P. K., Nihashi, M., Niida, T., Nouicer, R., Novitzky, N., Novák, T., Nukazuka, G., Nyanin, A. S., O'Brien, E., Ogilvie, C. A., Oide, H., Okada, K., Koop, J. D. Orjuela, Orosz, M., Osborn, J. D., Oskarsson, A., Ottino, G. J., Ozawa, K., Pak, R., Pantuev, V., Papavassiliou, V., Park, I. H., Park, J. S., Park, S., Park, S. K., Patel, L., Patel, M., Pate, S. F., Peng, J. -C., Perepelitsa, D. V., Perera, G. D. N., Peressounko, D. Yu., PerezLara, C. E., Perry, J., Petti, R., Phipps, M., Pinkenburg, C., Pisani, R. P., Potekhin, M., Purschke, M. L., Qu, H., Rak, J., Ravinovich, I., Read, K. F., Reynolds, D., Riabov, V., Riabov, Y., Richardson, E., Richford, D., Rinn, T., Riveli, N., Roach, D., Rolnick, S. D., Rosati, M., Rowan, Z., Ryu, M. S., Safonov, A. S., Sahlmueller, B., Saito, N., Sakaguchi, T., Sako, H., Samsonov, V., Sarsour, M., Sato, S., Sawada, S., Schaefer, B., Schmoll, B. K., Sedgwick, K., Seele, J., Seidl, R., Sekiguchi, Y., Seleznev, A., Sen, A., Seto, R., Sett, P., Sexton, A., Sharma, D., Shaver, A., Shein, I., Shibata, T. -A., Shigaki, K., Shimomura, M., Shioya, T., Shoji, K., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Singh, B. K., Singh, C. P., Singh, V., Skolnik, M., Slunečka, M., Smith, K. L., Snowball, M., Solano, S., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Stankus, P. W., Steinberg, P., Stenlund, E., Stepanov, M., Ster, A., Stoll, S. P., Stone, M. R., Sugitate, T., Sukhanov, A., Sumita, T., Sun, J., Sun, Z., Sziklai, J., Takahara, A., Taketani, A., Tanaka, Y., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Taranenko, A., Tarnai, G., Tennant, E., Tieulent, R., Timilsina, A., Todoroki, T., Tomášek, M., Torii, H., Towell, C. L., Towell, R. S., Tserruya, I., Ueda, Y., Ujvari, B., van Hecke, H. W., Vargyas, M., Vazquez-Zambrano, E., Veicht, A., Velkovska, J., Virius, M., Vrba, V., Vukman, N., Vznuzdaev, E., Vértesi, R., Wang, X. R., Watanabe, D., Watanabe, K., Watanabe, Y., Watanabe, Y. S., Wei, F., Whitaker, S., Wolin, S., Woody, C. L., Wysocki, M., Xia, B., Xue, L., Xu, C., Xu, Q., Yalcin, S., Yamaguchi, Y. L., Yamamoto, H., Yanovich, A., Yokkaichi, S., Yoon, I., Yoo, J. H., Younus, I., You, Z., Yushmanov, I. E., Yu, H., Zajc, W. A., Zelenski, A., Zhou, S., and Zou, L.

Subjects
High Energy Physics - Experiment, Nuclear Experiment
Abstract

The jet cross-section and jet-substructure observables in $p$$+$$p$ collisions at $\sqrt{s}=200$ GeV were measured by the PHENIX Collaboration at the Relativistic Heavy Ion Collider (RHIC). Jets are reconstructed from charged-particle tracks and electromagnetic-calorimeter clusters using the anti-$k_{t}$ algorithm with a jet radius $R=0.3$ for jets with transverse momentum within $8.0

Published
2024

9. Long-Term Aging Study of a Silicon Nitride Nanomechanical Resonator

Author

Stephan, Michel, Bouchard, Alexandre, Hodges, Timothy, Green, Richard G., Koukoulas, Triantafillos, Wu, Lixue, and St-Gelais, Raphael

Subjects
Condensed Matter - Materials Science
Abstract

Short-term changes in the resonance frequency of silicon nitride (SiN) nanomechanical resonators can be measured very precisely due to low thermomechanical fluctuations resulting from large mechanical quality factors. These properties enable high-performance detection of quasi-instantaneous stimuli, such as sudden exposure to radiation or adsorption of mass. However, practical use of such sensors will eventually raise questions regarding their less-studied longer-term stability, notably for calibration purposes. We characterize aging of an as-fabricated SiN membrane by continuously tracking changes of its resonance frequency over 135 days in a temperature-controlled high vacuum environment. The aging behavior is consistent with previously reported double-logarithmic and drift-reversal aging trends observed in quartz oscillators. The aging magnitude (300 ppm) is also comparable to typical temperature compensated quartz oscillators (TCXO), after normalization to account for the greater importance of interfaces in our thin (90 nm) resonator, compared to several microns thick TCXOs. Possible causes of aging due to surface adsorption are investigated. We review models on how water adsorption and desorption can cause significant frequency changes, predominantly due to chemisorption stress. Chemical species adsorbed on the resonator surface are also identified by X-ray photoelectron spectroscopy (XPS). These measurements show a significant increase in carbon every time the sample is placed under vacuum, while subsequent exposure to air causes an increase in oxidated carbon. Developing models for the contribution of carbon and oxygen to the membrane stress should therefore be an important future direction. Other contaminants, notably alkaline and halide ions, are detected in smaller quantities and briefly discussed.

Published
2024

10. That Special Time of the Month: Feminine Hygiene in College Outdoor Recreation

Author

Meghan Campano, Shelby Langdon, Jan Hodges, and Anthony Deringer

Abstract

Background: More women are going outdoors and menstrual hygiene is a concern for these women, we do not know how collegiate outdoor programs are addressing this topic, if at all. It is possible that feminine hygiene may not be adequately discussed in these settings. Because of this, the overall health and outdoor experiences of female participants are potentially at risk. Purpose: The purpose of this study was to gain a better understanding of current practices and potential barriers surrounding feminine hygiene and menstruation dialogs in college outdoor recreation programs in Texas. Methodology/Approach: An open-ended online survey was distributed to 36 schools with outdoor recreation programs in Texas. Responses were independently analyzed and coded for emergent themes. Findings/Conclusions: Thirty-eight percent of schools did not address feminine hygiene and menstruation in pretrip communications. Predominant themes consisted of an emphasis on health and hygiene, dependence on female leaders, a need for more knowledge and resources, and a desire for normalization. Implications: Most professionals expressed that resources to expand their knowledge on these topics can help to better prepare participants. Current practices surrounding these topics may be insufficient and able to improve. Further research is needed to evaluate the efficacy of the curriculum and the preference of participants.

Published
2024
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11. The Associations between Parenting Self-Efficacy and Parents' Contributions to the Home-School Partnership among Parents of Primary School Students: A Multilevel Meta-Analysis

Author

Tianyi Ma, Cassandra L. Tellegen, Julie Hodges, and Matthew R. Sanders

Abstract

High-quality partnerships between families and schools can bring enormous benefits to the development, learning, and wellbeing of children. Decades of research has identified parenting self-efficacy as a key factor influencing parents' contributions toward effective home-school partnerships. However, the strength of this association has varied significantly across studies with the aggregated strength remaining unclear. This meta-analysis aimed to investigate the associations between parenting self-efficacy and various aspects of parents' contribution to the home-school partnership, namely home-based involvement, school-based involvement, home-school communication and relationships, as well as parental expectations and aspirations among parents of primary school students. Moderator effects were also examined. Through systematically searching six databases and screening papers, we included 50 independent studies involving 185 effect sizes (N = 20,043 children). Results showed a small to medium correlation between parenting self-efficacy and the multidimensional construct of home-school partnership outcomes (r = 0.189). The associations were stronger for education-focused parenting self-efficacy (r = 0.183) than general parenting self-efficacy (r = 0.114) and were stronger still for home-based participation (r = 0.248) and parental expectations and aspirations (r = 0.248) than school-based participation (r = 0.124) and parent-teacher communication/relationship (r = 0.090). We detected limited moderating effects of child gender, parent gender, ethnicity, sample type (general or targeted), and socio-economic status and publication bias. Overall, this meta-analysis provides evidence to support the positive relationship between parenting self-efficacy and parents' contributions to the strength of the home-school partnership. Implications and suggestions for future research are discussed.

Published
2024
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12. Unlocking SSM/V Success: Welcoming Student Service Members and Veterans and Supporting SSM/V Experiences

Author

Thomas J. Hodges, Kimberly D. Gomes, Geno C. Foral, Tyler L. Collette, and Brian A. Moore

Abstract

Helping student service members and veterans (SSM/Vs) earn a college degree is central to supporting them post-service. Yet, this generation of SSM/Vs faces challenges in higher education, including problems adapting, poor health, and administrative constraints, contributing to worsened academic outcomes and a sense of isolation on campus. This monograph synthesizes research on the challenges facing SSM/Vs. It also frames common aspects of successful programs aiding SSM/Vs as three areas for intervention: how administrators and faculty can create a welcoming campus for SSM/Vs; ways universities can create support systems for SSM/V social, health, and academic success; and engaging community partnerships to enable these efforts. Whether SSM/Vs overcome their challenges and unlock their strengths is contingent on opportunities provided within the school itself, and by its faculty, administrators, students, and community. Central to these efforts should be the goal of inclusivity enhancement, community building, and reduction of health-related dysfunction among SSM/Vs.

Published
2024
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13. Parkinsons disease variant detection and disclosure: PD GENEration, a North American study.

Author

Cook, Lola, Verbrugge, Jennifer, Schwantes-An, Tae-Hwi, Schulze, Jeanine, Foroud, Tatiana, Hall, Anne, Marder, Karen, Mata, Ignacio, Mencacci, Niccolò, Nance, Martha, Schwarzschild, Michael, Simuni, Tanya, Bressman, Susan, Wills, Anne-Marie, Fernandez, Hubert, Litvan, Irene, Lyons, Kelly, Shill, Holly, Singer, Carlos, Tropea, Thomas, Vanegas Arroyave, Nora, Carbonell, Janfreisy, Cruz Vicioso, Rossy, Katus, Linn, Quinn, Joseph, Hodges, Priscila, Meng, Yan, Strom, Samuel, Blauwendraat, Cornelis, Lohmann, Katja, Casaceli, Cynthia, Rao, Shilpa, Ghosh Galvelis, Kamalini, Naito, Anna, Beck, James, and Alcalay, Roy

Subjects
GBA1, LRRK2, Parkinson’s disease, clinical trials, genetic counselling, genetic testing, Humans, Parkinson Disease, Genetic Testing, Male, Female, Glucosylceramidase, Leucine-Rich Repeat Serine-Threonine Protein Kinase-2, alpha-Synuclein, Aged, Middle Aged, Ubiquitin-Protein Ligases, Protein Kinases, Protein Deglycase DJ-1, Vesicular Transport Proteins, North America, Genetic Variation, Genetic Predisposition to Disease, Adult, Disclosure, Genetic Counseling, Canada, United States
Abstract

Variants in seven genes (LRRK2, GBA1, PRKN, SNCA, PINK1, PARK7 and VPS35) have been formally adjudicated as causal contributors to Parkinsons disease; however, individuals with Parkinsons disease are often unaware of their genetic status since clinical testing is infrequently offered. As a result, genetic information is not incorporated into clinical care, and variant-targeted precision medicine trials struggle to enrol people with Parkinsons disease. Understanding the yield of genetic testing using an established gene panel in a large, geographically diverse North American population would help patients, clinicians, clinical researchers, laboratories and insurers better understand the importance of genetics in approaching Parkinsons disease. PD GENEration is an ongoing multi-centre, observational study (NCT04057794, NCT04994015) offering genetic testing with results disclosure and genetic counselling to those in the US (including Puerto Rico), Canada and the Dominican Republic, through local clinical sites or remotely through self-enrolment. DNA samples are analysed by next-generation sequencing including deletion/duplication analysis (Fulgent Genetics) with targeted testing of seven major Parkinsons disease-related genes. Variants classified as pathogenic/likely pathogenic/risk variants are disclosed to all tested participants by either neurologists or genetic counsellors. Demographic and clinical features are collected at baseline visits. Between September 2019 and June 2023, the study enrolled 10 510 participants across >85 centres, with 8301 having received results. Participants were: 59% male; 86% White, 2% Asian, 4% Black/African American, 9% Hispanic/Latino; mean age 67.4 ± 10.8 years. Reportable genetic variants were observed in 13% of all participants, including 18% of participants with one or more high risk factors for a genetic aetiology: early onset (

Published
2024

14. Centrality dependence of L\'evy-stable two-pion Bose-Einstein correlations in $\sqrt{s_{_{NN}}}=200$ GeV Au$+$Au collisions

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Adare, A., Aidala, C., Ajitanand, N. N., Akiba, Y., Akimoto, R., Al-Ta'ani, H., Alexander, J., Angerami, A., Aoki, K., Apadula, N., Aramaki, Y., Asano, H., Aschenauer, E. C., Atomssa, E. T., Awes, T. C., Azmoun, B., Babintsev, V., Bai, M., Bannier, B., Barish, K. N., Bassalleck, B., Bathe, S., Baublis, V., Baumgart, S., Bazilevsky, A., Belmont, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Blankenship, B., Blau, D. S., Bok, J. S., Borisov, V., Boyle, K., Brooks, M. L., Buesching, H., Bumazhnov, V., Butsyk, S., Campbell, S., Castera, P., Chen, C. -H., Chen, D., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Choi, S., Choudhury, R. K., Christiansen, P., Chujo, T., Chvala, O., Cianciolo, V., Citron, Z., Cole, B. A., Connors, M., Corliss, R., Csanád, M., Csörgő, T., D'Orazio, L., Dairaku, S., Datta, A., Daugherity, M. S., David, G., Denisov, A., Deshpande, A., Desmond, E. J., Dharmawardane, K. V., Dietzsch, O., Ding, L., Dion, A., Donadelli, M., Doomra, V., Drapier, O., Drees, A., Drees, K. A., Durham, J. M., Durum, A., Edwards, S., Efremenko, Y. V., Engelmore, T., Enokizono, A., Esha, R., Eyser, K. O., Fadem, B., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fleuret, F., Fokin, S. L., Frantz, J. E., Franz, A., Frawley, A. D., Fukao, Y., Fusayasu, T., Gainey, K., Gal, C., Garishvili, A., Garishvili, I., Glenn, A., Gong, X., Gonin, M., Goto, Y., de Cassagnac, R. Granier, Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Guo, L., Guo, T., Gustafsson, H. -Å., Hachiya, T., Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hanks, J., Hashimoto, K., Haslum, E., Hayano, R., Hemmick, T. K., Hester, T., He, X., Hill, J. C., Hodges, A., Hollis, R. S., Homma, K., Hong, B., Horaguchi, T., Hori, Y., Ichihara, T., Iinuma, H., Ikeda, Y., Imrek, J., Inaba, M., Iordanova, A., Isenhower, D., Issah, M., Ivanishchev, D., Jacak, B. V., Javani, M., Jiang, X., Ji, Z., Johnson, B. M., Joo, K. S., Jouan, D., Jumper, D. S., Kamin, J., Kaneti, S., Kang, B. H., Kang, J. H., Kang, J. S., Kapustinsky, J., Karatsu, K., Kasai, M., Kasza, G., Kawall, D., Kazantsev, A. V., Kempel, T., Khanzadeev, A., Kijima, K. M., Kim, B. I., Kim, C., Kim, D. J., Kim, E. -J., Kim, H. J., Kim, K. -B., Kim, Y. -J., Kim, Y. K., Kinney, E., Kiss, Á., Kistenev, E., Klatsky, J., Kleinjan, D., Kline, P., Komatsu, Y., Komkov, B., Koster, J., Kotchetkov, D., Kotov, D., Kovacs, L., Krizek, F., Král, A., Kunde, G. J., Kurgyis, B., Kurita, K., Kurosawa, M., Kwon, Y., Kyle, G. S., Lai, Y. S., Lajoie, J. G., Lebedev, A., Lee, B., Lee, D. M., Lee, J., Lee, K. B., Lee, K. S., Lee, S. H., Lee, S. R., Leitch, M. J., Leite, M. A. L., Leitgab, M., Lewis, B., Lim, S. H., Levy, L. A. Linden, Liu, M. X., Lökös, S., Loomis, D. A., Love, B., Maguire, C. F., Makdisi, Y. I., Makek, M., Manion, A., Manko, V. I., Mannel, E., Masumoto, S., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Mendoza, M., Meredith, B., Miake, Y., Mibe, T., Mignerey, A. C., Milov, A., Mishra, D. K., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Miyachi, Y., Miyasaka, S., Mohanty, A. K., Mohapatra, S., Moon, H. J., Morrison, D. P., Motschwiller, S., Moukhanova, T. V., Mulilo, B., Murakami, T., Murata, J., Mwai, A., Nagae, T., Nagamiya, S., Nagle, J. L., Nagy, M. I., Nakagawa, I., Nakamiya, Y., Nakamura, K. R., Nakamura, T., Nakano, K., Nattrass, C., Nederlof, A., Nihashi, M., Nouicer, R., Novák, T., Novitzky, N., Nukazuka, G., Nyanin, A. S., O'Brien, E., Ogilvie, C. A., Okada, K., Orosz, M., Oskarsson, A., Ouchida, M., Ozawa, K., Pak, R., Pantuev, V., Papavassiliou, V., Park, B. H., Park, I. H., Park, J. S., Park, S., Park, S. K., Patel, L., Pate, S. F., Pei, H., Peng, J. -C., Pereira, H., Peressounko, D. Yu., Petti, R., Pinkenburg, C., Pisani, R. P., Potekhin, M., Proissl, M., Purschke, M. L., Qu, H., Rak, J., Ravinovich, I., Read, K. F., Reynolds, D., Riabov, V., Riabov, Y., Richardson, E., Richford, D., Roach, D., Roche, G., Rolnick, S. D., Rosati, M., Sahlmueller, B., Saito, N., Sakaguchi, T., Samsonov, V., Sano, M., Sarsour, M., Sawada, S., Sedgwick, K., Seidl, R., Sen, A., Seto, R., Sharma, D., Shein, I., Shibata, T. -A., Shigaki, K., Shimomura, M., Shoji, K., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Sim, K. S., Singh, B. K., Singh, C. P., Singh, V., Slunečka, M., Smith, K. L., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Stankus, P. W., Stenlund, E., Stepanov, M., Ster, A., Stoll, S. P., Sugitate, T., Sukhanov, A., Sun, J., Sun, Z., Sziklai, J., Takagui, E. M., Takahara, A., Taketani, A., Tanaka, Y., Taneja, S., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Taranenko, A., Tennant, E., Themann, H., Todoroki, T., Tomášek, L., Tomášek, M., Torii, H., Towell, R. S., Tserruya, I., Tsuchimoto, Y., Tsuji, T., Ujvari, B., Vale, C., van Hecke, H. W., Vargyas, M., Vazquez-Zambrano, E., Veicht, A., Velkovska, J., Virius, M., Vossen, A., Vrba, V., Vznuzdaev, E., Vértesi, R., Wang, X. R., Watanabe, D., Watanabe, K., Watanabe, Y., Watanabe, Y. S., Wei, F., Wei, R., White, S. N., Winter, D., Wolin, S., Woody, C. L., Wysocki, M., Xia, B., Yamaguchi, Y. L., Yang, R., Yanovich, A., Ying, J., Yokkaichi, S., Younus, I., You, Z., Yushmanov, I. E., Zajc, W. A., and Zelenski, A.

Subjects
Nuclear Experiment
Abstract

The PHENIX experiment measured the centrality dependence of two-pion Bose-Einstein correlation functions in $\sqrt{s_{_{NN}}}=200$~GeV Au$+$Au collisions at the Relativistic Heavy Ion Collider at Brookhaven National Laboratory. The data are well represented by L\'evy-stable source distributions. The extracted source parameters are the correlation-strength parameter $\lambda$, the L\'evy index of stability $\alpha$, and the L\'evy-scale parameter $R$ as a function of transverse mass $m_T$ and centrality. The $\lambda(m_T)$ parameter is constant at larger values of $m_T$, but decreases as $m_T$ decreases. The L\'evy scale parameter $R(m_T)$ decreases with $m_T$ and exhibits proportionality to the length scale of the nuclear overlap region. The L\'evy exponent $\alpha(m_T)$ is independent of $m_T$ within uncertainties in each investigated centrality bin, but shows a clear centrality dependence. At all centralities, the L\'evy exponent $\alpha$ is significantly different from that of Gaussian ($\alpha=2$) or Cauchy ($\alpha=1$) source distributions. Comparisons to the predictions of Monte-Carlo simulations of resonance-decay chains show that in all but the most peripheral centrality class (50%-60%), the obtained results are inconsistent with the measurements, unless a significant reduction of the in-medium mass of the $\eta'$ meson is included. In each centrality class, the best value of the in-medium $\eta'$ mass is compared to the mass of the $\eta$ meson, as well as to several theoretical predictions that consider restoration of $U_A(1)$ symmetry in hot hadronic matter., Comment: 401 authors from 75 institutions, 20 pages, 15 figures, 2 tables. v1 is version submitted to Physical Review C. HEPdata tables for the points plotted in figures for this and previous PHENIX publications are (or will be) publicly available at http://www.phenix.bnl.gov/papers.html

Published
2024

15. Jet modification via $\pi^0$-hadron correlations in Au$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Adare, A., Afanasiev, S., Aidala, C., Ajitanand, N. N., Akiba, Y., Al-Bataineh, H., Alexander, J., Alfred, M., Aoki, K., Apadula, N., Aphecetche, L., Asai, J., Asano, H., Atomssa, E. T., Averbeck, R., Awes, T. C., Azmoun, B., Babintsev, V., Bai, M., Baksay, G., Baksay, L., Baldisseri, A., Bandara, N. S., Bannier, B., Barish, K. N., Barnes, P. D., Bassalleck, B., Basye, A. T., Bathe, S., Batsouli, S., Baublis, V., Baumann, C., Bazilevsky, A., Beaumier, M., Beckman, S., Belikov, S., Belmont, R., Bennett, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Bickley, A. A., Blankenship, B., Blau, D. S., Boissevain, J. G., Bok, J. S., Borel, H., Borisov, V., Boyle, K., Brooks, M. L., Bryslawskyj, J., Buesching, H., Bumazhnov, V., Bunce, G., Butsyk, S., Camacho, C. M., Campbell, S., Chang, B. S., Chang, W. C., Charvet, J. L., Chen, C. -H., Chen, D., Chernichenko, S., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Choudhury, R. K., Chujo, T., Chung, P., Churyn, A., Cianciolo, V., Citron, Z., Cole, B. A., Connors, M., Constantin, P., Corliss, R., Csanád, M., Csörgő, T., d'Enterria, D., Dahms, T., Dairaku, S., Danley, T. W., Das, K., Datta, A., Daugherity, M. S., David, G., DeBlasio, K., Dehmelt, K., Denisov, A., Deshpande, A., Desmond, E. J., Dietzsch, O., Dion, A., Diss, P. B., Donadelli, M., Doomra, V., Do, J. H., Drapier, O., Drees, A., Drees, K. A., Dubey, A. K., Durham, J. M., Durum, A., Dutta, D., Dzhordzhadze, V., Efremenko, Y. V., Ellinghaus, F., En'yo, H., Engelmore, T., Enokizono, A., Esha, R., Eyser, K. O., Fadem, B., Feege, N., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fleuret, F., Fokin, S. L., Fraenkel, Z., Frantz, J. E., Franz, A., Frawley, A. D., Fujiwara, K., Fukao, Y., Fusayasu, T., Gallus, P., Gal, C., Garg, P., Garishvili, I., Ge, H., Giordano, F., Glenn, A., Gong, H., Gonin, M., Gosset, J., Goto, Y., de Cassagnac, R. Granier, Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gunji, T., Guo, T., Gustafsson, H. -Å., Hachiya, T., Henni, A. Hadj, Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hamilton, H. F., Hanks, J., Han, R., Han, S. Y., Hartouni, E. P., Haruna, K., Hasegawa, S., Haseler, T. O. S., Hashimoto, K., Haslum, E., Hayano, R., Heffner, M., Hemmick, T. K., Hester, T., He, X., Hill, J. C., Hodges, A., Hohlmann, M., Hollis, R. S., Holzmann, W., Homma, K., Hong, B., Horaguchi, T., Hornback, D., Hoshino, T., Hotvedt, N., Huang, J., Ichihara, T., Ichimiya, R., Iinuma, H., Ikeda, Y., Imai, K., Imrek, J., Inaba, M., Iordanova, A., Isenhower, D., Ishihara, M., Isobe, T., Issah, M., Isupov, A., Ivanishchev, D., Jacak, B. V., Jezghani, M., Jiang, X., Jin, J., Ji, Z., Johnson, B. M., Joo, K. S., Jouan, D., Jumper, D. S., Kajihara, F., Kametani, S., Kamihara, N., Kamin, J., Kanda, S., Kang, J. H., Kapustinsky, J., Kawall, D., Kazantsev, A. V., Kempel, T., Key, J. A., Khachatryan, V., Khanzadeev, A., Kijima, K. M., Kikuchi, J., Kimelman, B., Kim, B. I., Kim, C., Kim, D. H., Kim, D. J., Kim, E., Kim, E. -J., Kim, G. W., Kim, M., Kim, S. H., Kinney, E., Kiriluk, K., Kiss, Á., Kistenev, E., Kitamura, R., Klatsky, J., Klay, J., Klein-Boesing, C., Kleinjan, D., Kline, P., Koblesky, T., Kochenda, L., Komkov, B., Konno, M., Koster, J., Kotov, D., Kovacs, L., Kozlov, A., Kravitz, A., Král, A., Kunde, G. J., Kurgyis, B., Kurita, K., Kurosawa, M., Kweon, M. J., Kwon, Y., Kyle, G. S., Lai, Y. S., Lajoie, J. G., Layton, D., Lebedev, A., Lee, D. M., Lee, K. B., Lee, S., Lee, S. H., Lee, T., Leitch, M. J., Leite, M. A. L., Lenzi, B., Liebing, P., Lim, S. H., Litvinenko, A., Liu, H., Liu, M. X., Liška, T., Li, X., Lokos, S., Loomis, D. A., Love, B., Lynch, D., Maguire, C. F., Makdisi, Y. I., Makek, M., Malakhov, A., Malik, M. D., Manion, A., Manko, V. I., Mannel, E., Mao, Y., Masui, H., Matathias, F., Mašek, L., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Means, N., Meles, A., Mendoza, M., Meredith, B., Miake, Y., Mignerey, A. C., Mikeš, P., Miki, K., Milov, A., Mishra, D. K., Mishra, M., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Miyasaka, S., Mizuno, S., Mohanty, A. K., Montuenga, P., Moon, T., Morino, Y., Morreale, A., Morrison, D. P., Moukhanova, T. V., Mukhopadhyay, D., Mulilo, B., Murakami, T., Murata, J., Mwai, A., Nagamiya, S., Nagashima, K., Nagle, J. L., Naglis, M., Nagy, M. I., Nakagawa, I., Nakagomi, H., Nakamiya, Y., Nakamura, T., Nakano, K., Nattrass, C., Netrakanti, P. K., Newby, J., Nguyen, M., Niida, T., Nishimura, S., Nouicer, R., Novitzky, N., Novák, T., Nukazuka, G., Nyanin, A. S., O'Brien, E., Oda, S. X., Ogilvie, C. A., Okada, K., Oka, M., Onuki, Y., Koop, J. D. Orjuela, Orosz, M., Osborn, J. D., Oskarsson, A., Ouchida, M., Ozawa, K., Pak, R., Palounek, A. P. T., Pantuev, V., Papavassiliou, V., Park, J., Park, J. S., Park, S., Park, W. J., Patel, M., Pate, S. F., Pei, H., Peng, J. -C., Pereira, H., Perepelitsa, D. V., Perera, G. D. N., Peresedov, V., Peressounko, D. Yu., Perry, J., Petti, R., Pinkenburg, C., Pinson, R., Pisani, R. P., Potekhin, M., Purschke, M. L., Purwar, A. K., Qu, H., Rakotozafindrabe, A., Rak, J., Ramson, B. J., Ravinovich, I., Read, K. F., Rembeczki, S., Reygers, K., Reynolds, D., Riabov, V., Riabov, Y., Richford, D., Rinn, T., Roach, D., Roche, G., Rolnick, S. D., Rosati, M., Rosendahl, S. S. E., Rosnet, P., Rowan, Z., Rubin, J. G., Rukoyatkin, P., Ružička, P., Rykov, V. L., Sahlmueller, B., Saito, N., Sakaguchi, T., Sakai, S., Sakashita, K., Sako, H., Samsonov, V., Sarsour, M., Sato, S., Sato, T., Sawada, S., Schaefer, B., Schmoll, B. K., Sedgwick, K., Seele, J., Seidl, R., Semenov, A. Yu., Semenov, V., Sen, A., Seto, R., Sett, P., Sexton, A., Sharma, D., Shein, I., Shibata, T. -A., Shigaki, K., Shimomura, M., Shoji, K., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Silvestre, C., Sim, K. S., Singh, B. K., Singh, C. P., Singh, V., Slunečka, M., Smith, K. L., Snowball, M., Soldatov, A., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Staley, F., Stankus, P. W., Stenlund, E., Stepanov, M., Ster, A., Stoll, S. P., Sugitate, T., Suire, C., Sukhanov, A., Sumita, T., Sun, J., Sun, Z., Sziklai, J., Takagui, E. M., Taketani, A., Tanabe, R., Tanaka, Y., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Taranenko, A., Tarján, P., Themann, H., Thomas, T. L., Tieulent, R., Timilsina, A., Todoroki, T., Togawa, M., Toia, A., Tomita, Y., Tomášek, L., Tomášek, M., Torii, H., Towell, C. L., Towell, R., Towell, R. S., Tram, V-N., Tserruya, I., Tsuchimoto, Y., Ujvari, B., Vale, C., Valle, H., van Hecke, H. W., Veicht, A., Velkovska, J., Vinogradov, A. A., Virius, M., Vrba, V., Vznuzdaev, E., Vértesi, R., Wang, X. R., Watanabe, Y., Watanabe, Y. S., Wei, F., Wessels, J., White, A. S., White, S. N., Winter, D., Wong, C. P., Woody, C. L., Wysocki, M., Xia, B., Xie, W., Xue, L., Yalcin, S., Yamaguchi, Y. L., Yamaura, K., Yang, R., Yanovich, A., Ying, J., Yokkaichi, S., Yoon, I., Yoo, J. H., Young, G. R., Younus, I., Yushmanov, I. E., Yu, H., Zajc, W. A., Zaudtke, O., Zelenski, A., Zhang, C., Zhou, S., Zolin, L., and Zou, L.

Subjects
Nuclear Experiment
Abstract

High-momentum two-particle correlations are a useful tool for studying jet-quenching effects in the quark-gluon plasma. Angular correlations between neutral-pion triggers and charged hadrons with transverse momenta in the range 4--12~GeV/$c$ and 0.5--7~GeV/$c$, respectively, have been measured by the PHENIX experiment in 2014 for Au$+$Au collisions at $\sqrt{s_{_{NN}}}=200$~GeV. Suppression is observed in the yield of high-momentum jet fragments opposite the trigger particle, which indicates jet suppression stemming from in-medium partonic energy loss, while enhancement is observed for low-momentum particles. The ratio and differences between the yield in Au$+$Au collisions and $p$$+$$p$ collisions, $I_{AA}$ and $\Delta_{AA}$, as a function of the trigger-hadron azimuthal separation, $\Delta\phi$, are measured for the first time at the Relativistic Heavy Ion Collider. These results better quantify how the yield of low-$p_T$ associated hadrons is enhanced at wide angle, which is crucial for studying energy loss as well as medium-response effects., Comment: 535 authors from 84 institutions, 12 pages, 8 figures. v2 is version accepted for publication in Physical Review C. HEPdata tables for the points plotted in figures for this and previous PHENIX publications are (or will be) publicly available at http://www.phenix.bnl.gov/papers.html

Published
2024
Full Text
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16. A Heavily Scattered Fast Radio Burst Is Viewed Through Multiple Galaxy Halos

Author

Faber, Jakob T., Ravi, Vikram, Ocker, Stella Koch, Sherman, Myles B., Sharma, Kritti, Connor, Liam, Law, Casey, Kosogorov, Nikita, Hallinan, Gregg, Harnach, Charlie, Hellbourg, Greg, Hobbs, Rick, Hodge, David, Hodges, Mark, Lamb, James W., Rasmussen, Paul, Somalwar, Jean J., Weinreb, Sander, and Woody, David P.

Subjects
Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Astrophysics of Galaxies
Abstract

We present a multi-wavelength study of the apparently non-repeating, heavily scattered fast radio burst, FRB 20221219A, detected by the Deep Synoptic Array 110 (DSA-110). The burst exhibits a moderate dispersion measure (DM) of $706.7^{+0.6}_{-0.6}$ $\mathrm{pc}~\mathrm{cm}^{-3}$ and an unusually high scattering timescale of $\tau_{\mathrm{obs}} = 19.2_{-2.7}^{+2.7}$ ms at 1.4 GHz. We associate the FRB with a Milky Way-like host galaxy at $z_{\mathrm{host}} = 0.554$ of stellar mass $\mathrm{log}_{10}(M_{\star, \mathrm{host}}) = 10.20^{+0.04}_{-0.03} ~M_\odot$. We identify two intervening galaxy halos at redshifts $z_{\mathrm{igh1}} = 0.492$ and $z_{\mathrm{igh2}} = 0.438$, with low impact parameters, $b_{\mathrm{igh1}} = 43.0_{-11.3}^{+11.3}$ kpc and $b_{\mathrm{igh2}} = 36.1_{-11.3}^{+11.3}$ kpc, and intermediate stellar masses, $\mathrm{log}_{10}(M_{\star, \mathrm{igh1}}) = 10.01^{+0.02}_{-0.02} ~M_\odot$ and $\mathrm{log}_{10}(M_{\star, \mathrm{igh2}}) = 10.60^{+0.02}_{-0.02} ~M_\odot$. The presence of two such galaxies suggests that the sightline is significantly overcrowded compared to the median sightline to this redshift, as inferred from the halo mass function. We perform a detailed analysis of the sightline toward FRB 20221219A, constructing both DM and scattering budgets. Our results suggest that, unlike most well-localized sources, the host galaxy does not dominate the observed scattering. Instead, we posit that an intersection with a single partially ionized cloudlet in the circumgalactic medium of an intervening galaxy could account for the substantial scattering in FRB 20221219A and remain in agreement with typical electron densities inferred for extra-planar dense cloud-like structures in the Galactic and extragalactic halos (e.g., high-velocity clouds)., Comment: 18 pages, 6 figures, submitted to ApJ, comments appreciated

Published
2024

17. Orbit structures and complexity in Schubert and Richardson Varieties

Author

Gao, Yibo and Hodges, Reuven

Subjects
Mathematics - Combinatorics, Mathematics - Algebraic Geometry, 05E10 (Primary) 14M27, 20F55, 17B22 (Secondary)
Abstract

The goal of this paper is twofold. Firstly, we provide a type-uniform formula for the torus complexity of the usual torus action on a Richardson variety, by developing the notion of algebraic dimensions of Bruhat intervals, strengthening a type $A$ result by Donten-Bury, Escobar and Portakal. In the process, we give an explicit description of the torus action on any Deodhar component as well as describe the root subgroups that comprise the component. Secondly, when a Levi subgroup in a reductive algebraic group acts on a Schubert variety, we exhibit a codimension preserving bijection between the Levi-Borel subgroup (a Borel subgroup in the Levi subgroup) orbits in the big open cell of that Schubert variety and torus orbits in the big open cell of a distinguished Schubert subvariety. This bijection has many applications including a type-uniform formula for the Levi-Borel complexity of the usual Levi-Borel subgroup action on a Schubert variety. We conclude by extending the Levi-Borel complexity results to a large class of Schubert varieties in the partial flag variety., Comment: 23 pages, corrections made to sections 4.1, 4.2

Published
2024

18. Transportability of Principal Causal Effects

Author

Clark, Justin M., Rott, Kollin W., Hodges, James S., and Huling, Jared D.

Subjects
Statistics - Methodology
Abstract

Recent research in causal inference has made important progress in addressing challenges to the external validity of trial findings. Such methods weight trial participant data to more closely resemble the distribution of effect-modifying covariates in a well-defined target population. In the presence of participant non-adherence to study medication, these methods effectively transport an intention-to-treat effect that averages over heterogeneous compliance behaviors. In this paper, we develop a principal stratification framework to identify causal effects conditioning on both compliance behavior and membership in the target population. We also develop non-parametric efficiency theory for and construct efficient estimators of such "transported" principal causal effects and characterize their finite-sample performance in simulation experiments. While this work focuses on treatment non-adherence, the framework is applicable to a broad class of estimands that target effects in clinically-relevant, possibly latent subsets of a target population.

Published
2024

19. Genome-wide analyses reveal a potential role for the MAPT, MOBP, and APOE loci in sporadic frontotemporal dementia.

Author

Manzoni, Claudia, Kia, Demis, Ferrari, Raffaele, Leonenko, Ganna, Costa, Beatrice, Saba, Valentina, Jabbari, Edwin, Tan, Manuela, Albani, Diego, Alvarez, Victoria, Alvarez, Ignacio, Andreassen, Ole, Angiolillo, Antonella, Arighi, Andrea, Baker, Matt, Benussi, Luisa, Bessi, Valentina, Binetti, Giuliano, Blackburn, Daniel, Boada, Merce, Boeve, Bradley, Borrego-Ecija, Sergi, Borroni, Barbara, Bråthen, Geir, Brooks, William, Bruni, Amalia, Caroppo, Paola, Bandres-Ciga, Sara, Clarimon, Jordi, Colao, Rosanna, Cruchaga, Carlos, Danek, Adrian, de Boer, Sterre, de Rojas, Itziar, di Costanzo, Alfonso, Dickson, Dennis, Diehl-Schmid, Janine, Dobson-Stone, Carol, Dols-Icardo, Oriol, Donizetti, Aldo, Dopper, Elise, Durante, Elisabetta, Ferrari, Camilla, Forloni, Gianluigi, Frangipane, Francesca, Fratiglioni, Laura, Kramberger, Milica, Galimberti, Daniela, Gallucci, Maurizio, García-González, Pablo, Ghidoni, Roberta, Giaccone, Giorgio, Graff, Caroline, Graff-Radford, Neill, Grafman, Jordan, Halliday, Glenda, Hernandez, Dena, Hjermind, Lena, Hodges, John, Holloway, Guy, Huey, Edward, Illán-Gala, Ignacio, Josephs, Keith, Knopman, David, Kristiansen, Mark, Kwok, John, Leber, Isabelle, Leonard, Hampton, Libri, Ilenia, Lleo, Alberto, Mackenzie, Ian, Madhan, Gaganjit, Maletta, Raffaele, Marquié, Marta, Maver, Ales, Menendez-Gonzalez, Manuel, Milan, Graziella, Miller, Bruce, Morris, Christopher, Morris, Huw, Nacmias, Benedetta, Newton, Judith, Nielsen, Jørgen, Nilsson, Christer, Novelli, Valeria, Padovani, Alessandro, Pal, Suvankar, Pasquier, Florence, Pastor, Pau, Perneczky, Robert, Peterlin, Borut, Petersen, Ronald, Piguet, Olivier, Pijnenburg, Yolande, Puca, Annibale, Rademakers, Rosa, Rainero, Innocenzo, Reus, Lianne, Richardson, Anna, and Riemenschneider, Matthias

Subjects
Humans, Frontotemporal Dementia, tau Proteins, Genome-Wide Association Study, Apolipoproteins E, Male, Female, Genetic Predisposition to Disease, Aged, Polymorphism, Single Nucleotide, Genetic Loci, Middle Aged, Case-Control Studies, Myelin Proteins
Abstract

Frontotemporal dementia (FTD) is the second most common cause of early-onset dementia after Alzheimer disease (AD). Efforts in the field mainly focus on familial forms of disease (fFTDs), while studies of the genetic etiology of sporadic FTD (sFTD) have been less common. In the current work, we analyzed 4,685 sFTD cases and 15,308 controls looking for common genetic determinants for sFTD. We found a cluster of variants at the MAPT (rs199443; p = 2.5 × 10-12, OR = 1.27) and APOE (rs6857; p = 1.31 × 10-12, OR = 1.27) loci and a candidate locus on chromosome 3 (rs1009966; p = 2.41 × 10-8, OR = 1.16) in the intergenic region between RPSA and MOBP, contributing to increased risk for sFTD through effects on expression and/or splicing in brain cortex of functionally relevant in-cis genes at the MAPT and RPSA-MOBP loci. The association with the MAPT (H1c clade) and RPSA-MOBP loci may suggest common genetic pleiotropy across FTD and progressive supranuclear palsy (PSP) (MAPT and RPSA-MOBP loci) and across FTD, AD, Parkinson disease (PD), and cortico-basal degeneration (CBD) (MAPT locus). Our data also suggest population specificity of the risk signals, with MAPT and APOE loci associations mainly driven by Central/Nordic and Mediterranean Europeans, respectively. This study lays the foundations for future work aimed at further characterizing population-specific features of potential FTD-discriminant APOE haplotype(s) and the functional involvement and contribution of the MAPT H1c haplotype and RPSA-MOBP loci to pathogenesis of sporadic forms of FTD in brain cortex.

Published
2024

20. Investigation of the genetic aetiology of Lewy body diseases with and without dementia

Author

Wu, Lesley Yue, Real, Raquel, Martinez-Carrasco, Alejandro, Chia, Ruth, Lawton, Michael A, Shoai, Maryam, Bresner, Catherine, Blauwendraat, Cornelis, Singleton, Andrew B, Ryten, Mina, Abramzon, Yevgeniya, Ahmed, Sarah, Alba, Camille, Albert, Marilyn S, Bacikova, Dagmar, Barrett, Matthew J, Beach, Thomas G, Bennett, David A, Besser, Lilah M, Bigio, Eileen H, Boeve, Bradley F, Bohannan, Ryan C, Caraway, Chad A, Palma, Jose-Alberto, Dalgard, Clifton L, Dickson, Dennis, Ding, Jinhui, Faber, Kelley, Ferman, Tanis, Ferrucci, Luigi, Flanagan, Margaret E, Foroud, Tatiana M, Ghetti, Bernardino, Gibbs, J Raphael, Goate, Alison, Goldstein, David, Graff-Radford, Neill R, Hu, Heng-Chen, Hupalo, Daniel, Kaiser, Scott M, Kaufmann, Horacio, Kim, Ronald C, Klein, Gregory, Kukull, Walter, Kuzma, Amanda, Leverenz, James, Lopez, Grisel, Mao, Qinwen, Martinez-McGrath, Elisa, Masliah, Eliezer, Monuki, Ed, Newell, Kathy L, Norcliffe-Kaufmann, Lucy, Perkins, Matthew, Pletnikova, Olga, Renton, Alan E, Resnick, Susan M, Ross, Owen A, Sabir, Marya S, Scherzer, Clemens R, Scholz, Sonja W, Serrano, Geidy, Shakkotai, Vikram, Sidransky, Ellen, Tanaka, Toshiko, Tayebi, Nahid, Traynor, Bryan J, Troncoso, Juan C, Viollet, Coralie, Walton, Ronald L, Woltjer, Randy, Wszolek, Zbigniew K, Black, Sandra E, Gan-Or, Ziv, Keith, Julia, Masellis, Mario, Rogaeva, Ekaterina, Aarsland, Dag, Al-Sarraj, Safa, Attems, Johannes, Ferrari, Raffaele, Gentleman, Steve, Hardy, John A, Hodges, Angela K, Love, Seth, McKeith, Ian, Morris, Christopher M, Morris, Huw R, Palmer, Laura, Pickering-Brown, Stuart, Reynolds, Regina H, Thomas, Alan J, Tilley, Bension S, Troakes, Claire, Brett, Francesca, Brice, Alexis, and Duyckaerts, Charles

Subjects
Biomedical and Clinical Sciences, Biological Psychology, Clinical Sciences, Neurosciences, Psychology, Neurodegenerative, Genetics, Prevention, Aging, Lewy Body Dementia, Brain Disorders, Dementia, Alzheimer's Disease Related Dementias (ADRD), Parkinson's Disease, Human Genome, Acquired Cognitive Impairment, Clinical Research, Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD), 2.1 Biological and endogenous factors, Neurological, International Lewy Body Dementia Genomics Consortium, APOE, Lewy body diseases, dementia, genome-wide association studies, Clinical sciences, Biological psychology
Abstract

Up to 80% of Parkinson's disease patients develop dementia, but time to dementia varies widely from motor symptom onset. Dementia with Lewy bodies presents with clinical features similar to Parkinson's disease dementia, but cognitive impairment precedes or coincides with motor onset. It remains controversial whether dementia with Lewy bodies and Parkinson's disease dementia are distinct conditions or represent part of a disease spectrum. The biological mechanisms underlying disease heterogeneity, in particular the development of dementia, remain poorly understood, but will likely be the key to understanding disease pathways and, ultimately, therapy development. Previous genome-wide association studies in Parkinson's disease and dementia with Lewy bodies/Parkinson's disease dementia have identified risk loci differentiating patients from controls. We collated data for 7804 patients of European ancestry from Tracking Parkinson's, The Oxford Discovery Cohort, and Accelerating Medicine Partnership-Parkinson's Disease Initiative. We conducted a discrete phenotype genome-wide association study comparing Lewy body diseases with and without dementia to decode disease heterogeneity by investigating the genetic drivers of dementia in Lewy body diseases. We found that risk allele rs429358 tagging APOEe4 increases the odds of developing dementia, and that rs7668531 near the MMRN1 and SNCA-AS1 genes and an intronic variant rs17442721 tagging LRRK2 G2019S on chromosome 12 are protective against dementia. These results should be validated in autopsy-confirmed cases in future studies.

Published
2024

21. Studies of $T_{cc}^+$ Decays and Transverse-Momentum-Dependent $J/\psi$ Production Using Effective Field Theory

Author

Hodges, Reed

Subjects
High Energy Physics - Phenomenology
Abstract

We describe the application of effective field theories for quantum chromodynamics (QCD) to two bound states involving heavy quarks: the $T_{cc}^+$ exotic meson and the $J/\psi$. We study the decay of the $T_{cc}^+$ in an effective theory for hadronic molecules, and find agreement with experiment. We also use the nonrelativistic QCD (NRQCD) factorization formalism to derive the leading-order transverse momentum dependent fragmentation functions (FFs) for quarks and gluons fragmenting to $J/\psi$. We then make use of these TMD FFs to compare the $J/\psi$ production mechanisms of light quark fragmentation and photon-gluon fusion, where the conclusions we draw can motivate future experiments at the Electron Ion Collider, shedding light on the inner structure of nucleons and testing ideas from NRQCD factorization. These results showcase the utility of effective field theories in explaining experiments and testing key concepts in nuclear/particle physics., Comment: PhD dissertation, Duke University; 152 pages, 39 figures

Published
2024

22. Kpc-Scale Neutral Iron K$\alpha$ Emission in the Starburst-AGN NGC 4945: a Relic AGN Outflow?

Author

Weaver, Kimberly A., Cann, Jenna M., Valencic, Lynne, Pfeifle, Ryan W., Kuntz, K. D., Campbell, Joel F., Engle, Kimberly, Tanner, Ryan, Hodges-Kluck, Edmund, Carlton, Isabella, and McCarthy, Miranda

Subjects
Astrophysics - Astrophysics of Galaxies, Astrophysics - High Energy Astrophysical Phenomena
Abstract

NGC 4945 contains a well-known heavily obscured active galactic nucleus (AGN) at its core, with prior reports of strong nuclear and off-nuclear neutral Fe K$\alpha$ emission due to the AGN activity. We report the discovery of very extended Fe K$\alpha$ emission with the XMM-Newton EPIC pn in a $\sim5$ kpc by $\sim10$ kpc region that is misaligned with the plane of the inclined optical galaxy disk by $\sim60$ degrees in projection. After a careful consideration of the crowded center of the galaxy and numerous unresolved hard X-ray sources present, we estimate that $\sim15$% of the Fe K$\alpha$ is extended on kpc-sized scales. The overall size and misalignment of the region follows an unusual pattern of radio polarization that is not typical of starbursts or normal disk galaxies but has been interpreted as possibly due to AGN activity. We suggest that the extended Fe K$\alpha$ emission arose from a period of AGN eruption several million years ago - a relic of a past AGN ejection episode., Comment: 24 pages including figures and tables, 12 figures, 3 tables. Submitted to ApJ, under review

Published
2024

23. Haro 11: The Spatially Resolved Lyman Continuum Sources

Author

Komarova, Lena, Oey, M. S., Hernandez, Svea, Adamo, Angela, Sirressi, Mattia, Leitherer, Claus, Mas-Hesse, J. M., Ostlin, Goran, Hodges-Kluck, Edmund, Bik, Arjan, Hayes, Matthew J., Jaskot, Anne E., Kunth, Daniel, Laursen, Peter, Melinder, Jens, and Rivera-Thorsen, T. Emil

Subjects
Astrophysics - Astrophysics of Galaxies
Abstract

As the nearest confirmed Lyman continuum (LyC) emitter, Haro 11 is an exceptional laboratory for studying LyC escape processes crucial to cosmic reionization. Our new HST/COS G130M/1055 observations of its three star-forming knots now reveal that the observed LyC originates in Knots B and C, with $903 - 912~\r{A}$ luminosities of $1.9\pm1.5 \times 10^{40}~\rm erg~s^{-1}$ and $0.9\pm0.7 \times 10^{40}~\rm erg~s^{-1}$, respectively. We derive local escape fractions $f_{\rm{esc, 912}} = 3.4\pm2.9\%$ and $5.1\pm4.3\%$ for Knots B and C, respectively. Our Starburst99 modeling shows dominant populations on the order of $\sim1-4$ Myr and $1-2\times10^7 \rm~M_\odot$ in each knot, with the youngest population in Knot B. Thus, the knot with the strongest LyC detection has the highest LyC production. However, LyC escape is likely less efficient in Knot B than in Knot C due to higher neutral gas covering. Our results therefore stress the importance of the intrinsic ionizing luminosity, and not just the escape fraction, for LyC detection. Similarly, the Ly$\alpha$ escape fraction does not consistently correlate with LyC flux, nor do narrow Ly$\alpha$ red peaks. High observed Ly$\alpha$ luminosity and low Ly$\alpha$ peak velocity separation, however, do correlate with higher LyC escape. Another insight comes from the undetected Knot A, which drives the Green Pea properties of Haro 11. Its density-bounded conditions suggest highly anisotropic LyC escape. Finally, both of the LyC-leaking Knots, B and C, host ultra-luminous X-ray sources (ULXs). While stars strongly dominate over the ULXs in LyC emission, this intriguing coincidence underscores the importance of unveiling the role of accretors in LyC escape and reionization., Comment: 22 pages, 5 figures. Accepted for publication in The Astrophysical Journal

Published
2024

24. Vibration Sensitivity of one-port and two-port MEMS microphones

Author

Doyon-D'Amour, Francis, Stalder, Carly, Hodges, Timothy, Stephan, Michel, Wu, Lixiue, Koukoulas, Triantafillos, Leahy, Stephane, and St-Gelais, Raphael

Subjects
Electrical Engineering and Systems Science - Audio and Speech Processing, Computer Science - Sound
Abstract

Micro-electro-mechanical system (MEMS) microphones (mics) with two acoustic ports are currently receiving considerable interest, with the promise of achieving higher directional sensitivity compared to traditional one-port architectures. However, measuring pressure differences in two-port microphones typically commands sensing elements that are softer than in one-port mics, and are therefore presumably more prone to interference from external vibration. Here we derive a universal expression for microphone sensitivity to vibration and we experimentally demonstrate its validity for several emerging two-port microphone technologies. We also perform vibration measurements on a one-port mic, thus providing a one-stop direct comparison between one-port and two-port sensing approaches. We find that the acoustically-referred vibration sensitivity of two-port MEMS mics, in units of measured acoustic pressure per external acceleration (i.e., Pascals per g), does not depend on the sensing element stiffness nor on its natural frequency. We also show that this vibration sensitivity in two-port mics is inversely proportional to frequency as opposed to the frequency independent behavior observed in one-port mics. This is confirmed experimentally for several types of microphone packages., Comment: 8 pages, 14 figures

Published
2024

30. State Preschool in a Mixed Delivery System: Lessons from Five States

Author

Learning Policy Institute, National Institute for Early Education Research (NIEER), Garver, Karin, Weisenfeld, G. G., Connors-Tadros, Lori, Hodges, Katherine, Melnick, Hanna, and Plasencia, Sara

Abstract

Most states in the United States operate their public preschool programs in a mixed delivery system that serves children in local education agencies (LEAs) as well as non-LEA settings, such as Head Start agencies, child care centers, private schools, and family child care homes. To inform state preschool administrators and policymakers as they refine their mixed delivery systems, this report describes the mixed delivery systems of five states that have taken different approaches to supporting providers across settings. The five states discussed in this report include: (1) Alabama; (2) Michigan; (3) New Jersey; (4) New York; and (5) West Virginia. This report answers the following questions: (1) What is the landscape of mixed delivery in select states' preschool programs? (2) How are state preschool contracts awarded, and what supports are provided to non-LEAs to participate? and (3) What are quality requirements, and who monitors and is ultimately responsible for program quality?

Published
2023

31. Bender--Knuth Billiards in Coxeter Groups

Author

Barkley, Grant, Defant, Colin, Hodges, Eliot, Kravitz, Noah, and Lee, Mitchell

Subjects
Mathematics - Combinatorics, Mathematics - Dynamical Systems, Mathematics - Group Theory, 05E18, 20F55, 37B20
Abstract

Let $(W,S)$ be a Coxeter system, and write $S=\{s_i:i\in I\}$, where $I$ is a finite index set. Fix a nonempty convex subset $\mathscr{L}$ of $W$. If $W$ is of type $A$, then $\mathscr{L}$ is the set of linear extensions of a poset, and there are important Bender--Knuth involutions $\mathrm{BK}_i\colon\mathscr{L}\to\mathscr{L}$ indexed by elements of $I$. For arbitrary $W$ and for each $i\in I$, we introduce an operator $\tau_i\colon W\to W$ (depending on $\mathscr{L}$) that we call a noninvertible Bender--Knuth toggle; this operator restricts to an involution on $\mathscr{L}$ that coincides with $\mathrm{BK}_i$ in type $A$. Given a Coxeter element $c=s_{i_n}\cdots s_{i_1}$, we consider the operator $\mathrm{Pro}_c=\tau_{i_n}\cdots\tau_{i_1}$. We say $W$ is futuristic if for every nonempty finite convex set $\mathscr{L}$, every Coxeter element $c$, and every $u\in W$, there exists an integer $K\geq 0$ such that $\mathrm{Pro}_c^K(u)\in\mathscr{L}$. We prove that finite Coxeter groups, right-angled Coxeter groups, rank-3 Coxeter groups, affine Coxeter groups of types $\widetilde A$ and $\widetilde C$, and Coxeter groups whose Coxeter graphs are complete are all futuristic. When $W$ is finite, we actually prove that if $s_{i_N}\cdots s_{i_1}$ is a reduced expression for the long element of $W$, then $\tau_{i_N}\cdots\tau_{i_1}(W)=\mathscr{L}$; this allows us to determine the smallest integer $\mathrm{M}(c)$ such that $\mathrm{Pro}_c^{{\mathrm{M}}(c)}(W)=\mathscr{L}$ for all $\mathscr{L}$. We also exhibit infinitely many non-futuristic Coxeter groups, including all irreducible affine Coxeter groups that are not of type $\widetilde A$, $\widetilde C$, or $\widetilde G_2$., Comment: 51 pages, 12 figures

Published
2024

32. Translational modulator ISRIB alleviates synaptic and behavioral phenotypes in Fragile X syndrome.

Author

Coulson, Rochelle, Frattini, Valentina, Moyer, Caitlin, Hodges, Jennifer, Walter, Peter, Mourrain, Philippe, Zuo, Yi, and Wang, Gordon

Subjects
Cell biology, Cellular neuroscience, Model organism, Molecular neuroscience, Small molecule
Abstract

Fragile X syndrome (FXS) is caused by the loss of fragile X messenger ribonucleoprotein (FMRP), a translational regulator that binds the transcripts of proteins involved in synaptic function and plasticity. Dysregulated protein synthesis is a central effect of FMRP loss, however, direct translational modulation has not been leveraged in the treatment of FXS. Thus, we examined the effect of the translational modulator integrated stress response inhibitor (ISRIB) in treating synaptic and behavioral symptoms of FXS. We show that FMRP loss dysregulates synaptic protein abundance, stabilizing dendritic spines through increased PSD-95 levels while preventing spine maturation through reduced glutamate receptor accumulation, thus leading to the formation of dense, immature dendritic spines, characteristic of FXS patients and Fmr1 knockout (KO) mice. ISRIB rescues these deficits and improves social recognition in Fmr1 KO mice. These findings highlight the therapeutic potential of targeting core translational mechanisms in FXS and neurodevelopmental disorders more broadly.

Published
2024

33. Human gene regulatory evolution is driven by the divergence of regulatory element function in both cis and trans.

Author

Hansen, Tyler, Day, Jessica, Capra, John, Hodges, Emily, and Fong, Sarah

Subjects
DNA regulatory elements, chromatin accessibility, comparative genomics, enhancer activity, functional genomics, gene regulation, human evolution, lymphoblastoid cell lines, massively parallel reporter assays, transcription factors, Animals, Humans, Macaca mulatta, Regulatory Sequences, Nucleic Acid, Gene Expression Regulation, Transcription Factors, Chromatin
Abstract

Gene regulatory divergence between species can result from cis-acting local changes to regulatory element DNA sequences or global trans-acting changes to the regulatory environment. Understanding how these mechanisms drive regulatory evolution has been limited by challenges in identifying trans-acting changes. We present a comprehensive approach to directly identify cis- and trans-divergent regulatory elements between human and rhesus macaque lymphoblastoid cells using assay for transposase-accessible chromatin coupled to self-transcribing active regulatory region (ATAC-STARR) sequencing. In addition to thousands of cis changes, we discover an unexpected number (∼10,000) of trans changes and show that cis and trans elements exhibit distinct patterns of sequence divergence and function. We further identify differentially expressed transcription factors that underlie ∼37% of trans differences and trace how cis changes can produce cascades of trans changes. Overall, we find that most divergent elements (67%) experienced changes in both cis and trans, revealing a substantial role for trans divergence-alone and together with cis changes-in regulatory differences between species.

Published
2024

34. Machine learning analysis of RB-TnSeq fitness data predicts functional gene modules in Pseudomonas putida KT2440.

Author

Borchert, Andrew, Bleem, Alissa, Lim, Hyun, Rychel, Kevin, Dooley, Keven, Kellermyer, Zoe, Hodges, Tracy, Beckham, Gregg, and Palsson, Bernhard

Subjects
Pseudomonas putida, RB-TnSeq, amino acid metabolism, aromatic catabolism, functional genomics, independent component analysis, machine learning, transposon insertion sequencing, Pseudomonas putida, Gene Regulatory Networks, Genomics
Abstract

UNLABELLED: There is growing interest in engineering Pseudomonas putida KT2440 as a microbial chassis for the conversion of renewable and waste-based feedstocks, and metabolic engineering of P. putida relies on the understanding of the functional relationships between genes. In this work, independent component analysis (ICA) was applied to a compendium of existing fitness data from randomly barcoded transposon insertion sequencing (RB-TnSeq) of P. putida KT2440 grown in 179 unique experimental conditions. ICA identified 84 independent groups of genes, which we call fModules (functional modules), where gene members displayed shared functional influence in a specific cellular process. This machine learning-based approach both successfully recapitulated previously characterized functional relationships and established hitherto unknown associations between genes. Selected gene members from fModules for hydroxycinnamate metabolism and stress resistance, acetyl coenzyme A assimilation, and nitrogen metabolism were validated with engineered mutants of P. putida. Additionally, functional gene clusters from ICA of RB-TnSeq data sets were compared with regulatory gene clusters from prior ICA of RNAseq data sets to draw connections between gene regulation and function. Because ICA profiles the functional role of several distinct gene networks simultaneously, it can reduce the time required to annotate gene function relative to manual curation of RB-TnSeq data sets. IMPORTANCE: This study demonstrates a rapid, automated approach for elucidating functional modules within complex genetic networks. While Pseudomonas putida randomly barcoded transposon insertion sequencing data were used as a proof of concept, this approach is applicable to any organism with existing functional genomics data sets and may serve as a useful tool for many valuable applications, such as guiding metabolic engineering efforts in other microbes or understanding functional relationships between virulence-associated genes in pathogenic microbes. Furthermore, this work demonstrates that comparison of data obtained from independent component analysis of transcriptomics and gene fitness datasets can elucidate regulatory-functional relationships between genes, which may have utility in a variety of applications, such as metabolic modeling, strain engineering, or identification of antimicrobial drug targets.

Published
2024

35. ENIGMAs simple seven: Recommendations to enhance the reproducibility of resting-state fMRI in traumatic brain injury.

Author

Esopenko, Carrie, de Souza, Nicola, Dominguez D, Juan, Newsome, Mary, Dobryakova, Ekaterina, Cwiek, Andrew, Mullin, Hollie, Kim, Nicholas, Mayer, Andrew, Adamson, Maheen, Bickart, Kevin, Breedlove, Katherine, Dennis, Emily, Disner, Seth, Haswell, Courtney, Hodges, Cooper, Hoskinson, Kristen, Johnson, Paula, Königs, Marsh, Li, Lucia, Liebel, Spencer, Livny, Abigail, Morey, Rajendra, Muir, Alexandra, Olsen, Alexander, Razi, Adeel, Su, Matthew, Tate, David, Velez, Carmen, Wilde, Elisabeth, Zielinski, Brandon, Thompson, Paul, Hillary, Frank, Caeyenberghs, Karen, Imms, Phoebe, Irimia, Andrei, and Monti, Martin

Subjects
Functional MRI, Functional connectivity, Lesions, Reproducibility, Resting state fMRI, Traumatic brain injury
Abstract

Resting state functional magnetic resonance imaging (rsfMRI) provides researchers and clinicians with a powerful tool to examine functional connectivity across large-scale brain networks, with ever-increasing applications to the study of neurological disorders, such as traumatic brain injury (TBI). While rsfMRI holds unparalleled promise in systems neurosciences, its acquisition and analytical methodology across research groups is variable, resulting in a literature that is challenging to integrate and interpret. The focus of this narrative review is to address the primary methodological issues including investigator decision points in the application of rsfMRI to study the consequences of TBI. As part of the ENIGMA Brain Injury working group, we have collaborated to identify a minimum set of recommendations that are designed to produce results that are reliable, harmonizable, and reproducible for the TBI imaging research community. Part one of this review provides the results of a literature search of current rsfMRI studies of TBI, highlighting key design considerations and data processing pipelines. Part two outlines seven data acquisition, processing, and analysis recommendations with the goal of maximizing study reliability and between-site comparability, while preserving investigator autonomy. Part three summarizes new directions and opportunities for future rsfMRI studies in TBI patients. The goal is to galvanize the TBI community to gain consensus for a set of rigorous and reproducible methods, and to increase analytical transparency and data sharing to address the reproducibility crisis in the field.

Published
2024

36. High count rate effects in event processing for XRISM/Resolve x-ray microcalorimeter

Author

Mizumoto, Misaki, Tsujimoto, Masahiro, Cumbee, Renata S., Eckart, Megan E., Ishisaki, Yoshitaka, Kilbourne, Caroline A., Hodges-Kluck, Edmund, Leutenegger, Maurice A., Porter, Frederick S., Sawada, Makoto, Takei, Yoh, Uchida, Yuusuke, Yamada, Shin'ya, and team, the XRISM Resolve

Subjects
Astrophysics - Instrumentation and Methods for Astrophysics
Abstract

The spectroscopic performance of x-ray instruments can be affected at high count rates. The effects and mitigation in the optical chain, such as x-ray attenuation filters or de-focusing mirrors, are widely discussed, but those in the signal chain are not. Using the Resolve x-ray microcalorimeter onboard the XRISM satellite, we discuss the effects observed during high count rate measurements and how these can be modeled. We focus on three instrumental effects that impact performance at high count rate: CPU limit, pile up, and electrical cross talk. High count rate data were obtained during ground testing using the flight model instrument and a calibration x-ray source. A simulated observation of GX 13+1 is presented to illustrate how to estimate these effects based on these models for observation planning. The impact of these effects on high count rate observations is discussed., Comment: 16 pages, 20 figures, Proc. SPIE

Published
2023
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37. Identified charged-hadron production in $p$$+$Al, $^3$He$+$Au, and Cu$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV and in U$+$U collisions at $\sqrt{s_{_{NN}}}=193$ GeV

Author

PHENIX Collaboration, Abdulameer, N. J., Acharya, U., Adare, A., Aidala, C., Ajitanand, N. N., Akiba, Y., Akimoto, R., Alexander, J., Alfred, M., Andrieux, V., Aoki, K., Apadula, N., Asano, H., Atomssa, E. T., Awes, T. C., Azmoun, B., Babintsev, V., Bai, M., Bai, X., Bandara, N. S., Bannier, B., Barish, K. N., Bathe, S., Baublis, V., Baumann, C., Baumgart, S., Bazilevsky, A., Beaumier, M., Beckman, S., Belmont, R., Berdnikov, A., Berdnikov, Y., Bichon, L., Black, D., Blankenship, B., Blau, D. S., Bok, J. S., Borisov, V., Boyle, K., Brooks, M. L., Bryslawskyj, J., Buesching, H., Bumazhnov, V., Butsyk, S., Campbell, S., Roman, V. Canoa, Cervantes, R., Chen, C. -H., Chiu, M., Chi, C. Y., Choi, I. J., Choi, J. B., Choi, S., Christiansen, P., Chujo, T., Cianciolo, V., Citron, Z., Cole, B. A., Connors, M., Corliss, R., Morales, Y. Corrales, Cronin, N., Crossette, N., Csanád, M., Csörgő, T., D'Orazio, L., Danley, T. W., Datta, A., Daugherity, M. S., David, G., Dean, C. T., DeBlasio, K., Dehmelt, K., Denisov, A., Deshpande, A., Desmond, E. J., Ding, L., Dion, A., Diss, P. B., Dixit, D., Doomra, V., Do, J. H., Drapier, O., Drees, A., Drees, K. A., Durham, J. M., Durum, A., En'yo, H., Engelmore, T., Enokizono, A., Esha, R., Eyser, K. O., Fadem, B., Fan, W., Feege, N., Fields, D. E., Finger, Jr., M., Finger, M., Firak, D., Fitzgerald, D., Fleuret, F., Fokin, S. L., Frantz, J. E., Franz, A., Frawley, A. D., Fukao, Y., Fukuda, Y., Fusayasu, T., Gainey, K., Gallus, P., Gal, C., Garg, P., Garishvili, A., Garishvili, I., Ge, H., Giles, M., Giordano, F., Glenn, A., Gong, X., Gonin, M., Goto, Y., de Cassagnac, R. Granier, Grau, N., Greene, S. V., Perdekamp, M. Grosse, Gu, Y., Gunji, T., Guo, T., Guragain, H., Hachiya, T., Haggerty, J. S., Hahn, K. I., Hamagaki, H., Hamilton, H. F., Hanks, J., Han, S. Y., Harvey, M., Hasegawa, S., Haseler, T. O. S., Hashimoto, K., Hayano, R., Hemmick, T. K., Hester, T., He, X., Hill, J. C., Hill, K., Hodges, A., Hollis, R. S., Homma, K., Hong, B., Hoshino, T., Hotvedt, N., Huang, J., Ichihara, T., Ikeda, Y., Imai, K., Imazu, Y., Inaba, M., Iordanova, A., Isenhower, D., Isinhue, A., Ivanishchev, D., Jacak, B. V., Jeon, S. J., Jezghani, M., Jiang, X., Ji, Z., Johnson, B. M., Joo, K. S., Jouan, D., Jumper, D. S., Kamin, J., Kanda, S., Kang, B. H., Kang, J. H., Kang, J. S., Kapukchyan, D., Kapustinsky, J., Karthas, S., Kawall, D., Kazantsev, A. V., Key, J. A., Khachatryan, V., Khandai, P. K., Khanzadeev, A., Khatiwada, A., Kijima, K. M., Kimelman, B., Kim, C., Kim, D. J., Kim, E. -J., Kim, G. W., Kim, M., Kim, T., Kim, Y. -J., Kim, Y. K., Kincses, D., Kingan, A., Kistenev, E., Kitamura, R., Klatsky, J., Kleinjan, D., Kline, P., Koblesky, T., Kofarago, M., Komkov, B., Koster, J., Kotchetkov, D., Kotov, D., Kovacs, L., Krizek, F., Kudo, S., Kurgyis, B., Kurita, K., Kurosawa, M., Kwon, Y., Lai, Y. S., Lajoie, J. G., Larionova, D., Lebedev, A., Lee, D. M., Lee, G. H., Lee, J., Lee, K. B., Lee, K. S., Lee, S., Lee, S. H., Leitch, M. J., Leitgab, M., Leung, Y. H., Lewis, B., Lewis, N. A., Lim, S. H., Liu, M. X., Li, X., Loggins, V. -R., Loomis, D. A., Lovasz, K., Lynch, D., Lökös, S., Maguire, C. F., Majoros, T., Makdisi, Y. I., Makek, M., Manion, A., Manko, V. I., Mannel, E., McCumber, M., McGaughey, P. L., McGlinchey, D., McKinney, C., Meles, A., Mendoza, M., Meredith, B., Miake, Y., Mibe, T., Mignerey, A. C., Milov, A., Mishra, D. K., Mitchell, J. T., Mitrankova, M., Mitrankov, Iu., Mitsuka, G., Miyasaka, S., Mizuno, S., Mohanty, A. K., Mohapatra, S., Mondal, M. M., Montuenga, P., Moon, T., Morrison, D. P., Moskowitz, M., Moukhanova, T. V., Muhammad, A., Mulilo, B., Murakami, T., Murata, J., Mwai, A., Nagae, T., Nagai, K., Nagamiya, S., Nagashima, K., Nagashima, T., Nagle, J. L., Nagy, M. I., Nakagawa, I., Nakagomi, H., Nakamiya, Y., Nakamura, K. R., Nakamura, T., Nakano, K., Nattrass, C., Nelson, S., Netrakanti, P. K., Nihashi, M., Niida, T., Nishimura, S., Nouicer, R., Novitzky, N., Novák, T., Nukazuka, G., Nyanin, A. S., O'Brien, E., Ogilvie, C. A., Oh, J., Oide, H., Okada, K., Koop, J. D. Orjuela, Orosz, M., Osborn, J. D., Oskarsson, A., Ottino, G. J., Ozawa, K., Pak, R., Pantuev, V., Papavassiliou, V., Park, I. H., Park, J. S., Park, S., Park, S. K., Patel, L., Patel, M., Pate, S. F., Peng, J. -C., Peng, W., Perepelitsa, D. V., Perera, G. D. N., Peressounko, D. Yu., PerezLara, C. E., Perry, J., Petti, R., Phipps, M., Pinkenburg, C., Pinson, R., Pisani, R. P., Potekhin, M., Pun, A., Purschke, M. L., Qu, H., Radzevich, P. V., Rak, J., Ramasubramanian, N., Ramson, B. J., Ravinovich, I., Read, K. F., Reynolds, D., Riabov, V., Riabov, Y., Richardson, E., Richford, D., Rinn, T., Riveli, N., Roach, D., Rolnick, S. D., Rosati, M., Rowan, Z., Rubin, J. G., Runchey, J., Ryu, M. S., Safonov, A. S., Sahlmueller, B., Saito, N., Sakaguchi, T., Sako, H., Samsonov, V., Sarsour, M., Sato, S., Sawada, S., Schaefer, B., Schmoll, B. K., Sedgwick, K., Seele, J., Seidl, R., Sekiguchi, Y., Sen, A., Seto, R., Sett, P., Sexton, A., Sharma, D., Shaver, A., Shein, I., Shibata, M., Shibata, T. -A., Shigaki, K., Shimomura, M., Shioya, T., Shi, Z., Shoji, K., Shukla, P., Sickles, A., Silva, C. L., Silvermyr, D., Singh, B. K., Singh, V., Skolnik, M., Slunečka, M., Smith, K. L., Snowball, M., Solano, S., Soltz, R. A., Sondheim, W. E., Sorensen, S. P., Sourikova, I. V., Stankus, P. W., Steinberg, P., Stenlund, E., Stepanov, M., Ster, A., Stoll, S. P., Stone, M. R., Sugitate, T., Sukhanov, A., Sumita, T., Sun, J., Sun, Z., Sziklai, J., Takahama, R., Takahara, A., Taketani, A., Tanaka, Y., Tanida, K., Tannenbaum, M. J., Tarafdar, S., Taranenko, A., Tarnai, G., Tennant, E., Tieulent, R., Timilsina, A., Todoroki, T., Tomášek, M., Torii, H., Towell, C. L., Towell, R., Towell, R. S., Tserruya, I., Ueda, Y., Ujvari, B., van Hecke, H. W., Vargyas, M., Vazquez-Zambrano, E., Veicht, A., Velkovska, J., Virius, M., Vrba, V., Vukman, N., Vznuzdaev, E., Vértesi, R., Wang, X. R., Wang, Z., Watanabe, D., Watanabe, K., Watanabe, Y., Watanabe, Y. S., Wei, F., Whitaker, S., White, A. S., Wolin, S., Wong, C. P., Woody, C. L., Wysocki, M., Xia, B., Xue, L., Xu, C., Xu, Q., Yalcin, S., Yamaguchi, Y. L., Yamamoto, H., Yanovich, A., Yokkaichi, S., Yoon, I., Yoo, J. H., Younus, I., You, Z., Yushmanov, I. E., Yu, H., Zajc, W. A., Zelenski, A., Zhou, S., and Zou, L.

Subjects
Nuclear Experiment
Abstract

The PHENIX experiment has performed a systematic study of identified charged-hadron ($\pi^\pm$, $K^\pm$, $p$, $\bar{p}$) production at midrapidity in $p$$+$Al, $^3$He$+$Au, Cu$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV and U$+$U collisions at $\sqrt{s_{_{NN}}}=193$ GeV. Identified charged-hadron invariant transverse-momentum ($p_T$) and transverse-mass ($m_T$) spectra are presented and interpreted in terms of radially expanding thermalized systems. The particle ratios of $K/\pi$ and $p/\pi$ have been measured in different centrality ranges of large (Cu$+$Au, U$+$U) and small ($p$$+$Al, $^3$He$+$Au) collision systems. The values of $K/\pi$ ratios measured in all considered collision systems were found to be consistent with those measured in $p$$+$$p$ collisions. However the values of $p/\pi$ ratios measured in large collision systems reach the values of $\approx0.6$, which is $\approx2$ times larger than in $p$$+$$p$ collisions. These results can be qualitatively understood in terms of the baryon enhancement expected from hadronization by recombination. Identified charged-hadron nuclear-modification factors ($R_{AB}$) are also presented. Enhancement of proton $R_{AB}$ values over meson $R_{AB}$ values was observed in central $^3$He$+$Au, Cu$+$Au, and U$+$U collisions. The proton $R_{AB}$ values measured in $p$$+$Al collision system were found to be consistent with $R_{AB}$ values of $\phi$, $\pi^\pm$, $K^\pm$, and $\pi^0$ mesons, which may indicate that the size of the system produced in $p$$+$Al collisions is too small for recombination to cause a noticeable increase in proton production., Comment: 480 authors from 78 institutions, 18 pages, 6 tables, 16 figures. v2 is version accepted for publication in Physical Review C. HEPdata tables for the points plotted in figures for this and previous PHENIX publications are (or will be) publicly available at http://www.phenix.bnl.gov/papers.html

Published
2023
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38. Feedback Cooling of an Insulating High-Q Diamagnetically Levitated Plate

Author

Tian, S., Jadeja, K., Kim, D., Hodges, A., Hermosa, G. C., Cusicanqui, C., Lecamwasam, R., Downes, J. E., and Twamley, J.

Subjects
Quantum Physics, Physics - Applied Physics
Abstract

Levitated systems in vacuum have many potential applications ranging from new types of inertial and magnetic sensors through to fundamental issues in quantum science, the generation of massive Schrodinger cats, and the connections between gravity and quantum physics. In this work, we demonstrate the passive, diamagnetic levitation of a centimeter-sized massive oscillator which is fabricated using a novel method that ensures that the material, though highly diamagnetic, is an electrical insulator. By chemically coating a powder of microscopic graphite beads with silica and embedding the coated powder in high-vacuum compatible wax, we form a centimeter-sized thin square plate which magnetically levitates over a checkerboard magnet array. The insulating coating reduces eddy damping by almost an order of magnitude compared to uncoated graphite with the same particle size. These plates exhibit a different equilibrium orientation to pyrolytic graphite due to their isotropic magnetic susceptibility. We measure the motional quality factor to be Q~1.58*10^5 for an approximately centimeter-sized composite resonator with a mean particle size of 12 microns. Further, we apply delayed feedback to cool the vertical motion of frequency ~19 Hz from room temperature to 320 millikelvin., Comment: 5 pages main + 13 pages supplementary

Published
2023

39. Searching for the Highest-z Dual AGN in the Deepest Chandra Surveys

Author

Sandoval, Brandon, Foord, Adi, Allen, Steven W., Volonteri, Marta, Stemo, Aaron, Chen, Nianyi, Di Matteo, Tiziana, Gultekin, Kayhan, Habouzit, Melanie, Puerto-Sanchez, Clara, Hodges-Kluck, Edmund, and Dubois, Yohan

Subjects
Astrophysics - High Energy Astrophysical Phenomena
Abstract

We present an analysis searching for dual AGN among 62 high-redshift ($2.5 < z < 3.5$) X-ray sources selected from publicly available deep Chandra fields. We aim to quantify the frequency of dual AGN in the high-redshift Universe, which holds implications for black hole merger timescales and low-frequency gravitational wave detection rates. We analyze each X-ray source using BAYMAX, an analysis tool that calculates the Bayes factor for whether a given archival Chandra AGN is more likely a single or dual point source. We find no strong evidence for dual AGN in any individual source in our sample. We then increase our sensitivity to search for dual AGN across the sample by comparing our measured distribution of Bayes factors to that expected from a sample composed entirely of single point sources, and again find no evidence for dual AGN in the observed sample distribution. Although our analysis utilizes one of the largest Chandra catalogs of high-$z$ X-ray point sources available to study, the findings remain limited by the modest number of sources observed at the highest spatial resolution with Chandra and the typical count rates of the detected sources. Our non-detection allows us to place an upper-limit on the X-ray dual AGN fraction between $2.5

Published
2023

40. Foundational Competencies and Responsibilities of a Research Software Engineer

Author

Goth, Florian, Alves, Renato, Braun, Matthias, Castro, Leyla Jael, Chourdakis, Gerasimos, Christ, Simon, Cohen, Jeremy, Druskat, Stephan, Erxleben, Fredo, Grad, Jean-Noël, Hagdorn, Magnus, Hodges, Toby, Juckeland, Guido, Kempf, Dominic, Lamprecht, Anna-Lena, Linxweiler, Jan, Löffler, Frank, Martone, Michele, Schwarzmeier, Moritz, Seibold, Heidi, Thiele, Jan Philipp, von Waldow, Harald, and Wittke, Samantha

Subjects
Computer Science - Software Engineering, Computer Science - Computers and Society, Physics - Computational Physics
Abstract

The term Research Software Engineer, or RSE, emerged a little over 10 years ago as a way to represent individuals working in the research community but focusing on software development. The term has been widely adopted and there are a number of high-level definitions of what an RSE is. However, the roles of RSEs vary depending on the institutional context they work in. At one end of the spectrum, RSE roles may look similar to a traditional research role. At the other extreme, they resemble that of a software engineer in industry. Most RSE roles inhabit the space between these two extremes. Therefore, providing a straightforward, comprehensive definition of what an RSE does and what experience, skills and competencies are required to become one is challenging. In this community paper we define the broad notion of what an RSE is, explore the different types of work they undertake, and define a list of fundamental competencies as well as values that define the general profile of an RSE. On this basis, we elaborate on the progression of these skills along different dimensions, looking at specific types of RSE roles, proposing recommendations for organisations, and giving examples of future specialisations. An appendix details how existing curricula fit into this framework., Comment: 34 pages, public repository for feedback here: https://github.com/the-teachingRSE-project/competencies

Published
2023

41. Properties of Nb\_xTi\_{(1-x)}N thin films deposited on 300 mm silicon wafers for upscaling superconducting digital circuits

Author

Lozano, Daniel Pérez, Soulié, Jean-Philippe, Hodges, Blake, Piao, Xiaoyu, O'Neal, Sabine, Valente-Feliciano, Anne-Marie, Herr, Quentin, Tőkei, Zsolt, Kim, Min-Soo, and Herr, Anna

Subjects
Condensed Matter - Superconductivity
Abstract

Scaling superconducting digital circuits requires fundamental changes in the current material set and fabrication process. The transition to 300 mm wafers and the implementation of advanced lithography are instrumental in facilitating mature CMOS processes, ensuring uniformity, and optimizing the yield. This study explores the properties of NbxTi(1-x)N films fabricated by magnetron DC sputtering on 300 mm Si wafers. As a promising alternative to traditional Nb in device manufacturing, NbxTi(1-x)N offers numerous advantages, including enhanced stability and scalability to smaller dimensions, in both processing and design. As a ternary material, NbxTi(1-x)N allows engineering material parameters by changing deposition conditions. The engineered properties can be used to modulate device parameters through the stack and mitigate failure modes. We report characterization of NbxTi(1-x)N films at less than 2% thickness variability, 2.4% Tc variability and 3% composition variability. The films material properties such as resistivity (140-375 {\Omega}cm) and critical temperature Tc (4.6 K - 14.1 K) are correlated with stoichiometry and morphology of the films. Our results highlight the significant influence of deposition conditions on crystallographic texture along the films and its correlation with Tc., Comment: 8 pages 8 figures

Published
2023
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42. The black hole occupation fraction of local dwarf galaxies with AXIS

Author

Gallo, Elena, Hodges-Kluck, Edmund, Treu, Tommaso, Baldassare, Vivienne, Seth, Anil, Greene, Jenny, Pacucci, Fabio, Plotkin, Richard, Reines, Amy, and Wilkes, Belinda

Subjects
Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Astrophysics of Galaxies
Abstract

The fraction of local dwarf galaxies that hosts massive black holes is arguably the cleanest diagnostic of the dominant seed formation mechanism of today's supermassive black holes. A 5 per cent constraint on this quantity can be achieved with AXIS observations of 3300 galaxies across the mass spectrum through a combination of serendipitous extra-galactic fields plus a dedicated 1 Msec GO program., Comment: This White Paper is part of a series commissioned for the AXIS Probe Concept Mission

Published
2023

43. X-ray Redshifts for Obscured Active Galactic Nuclei with AXIS Deep and Intermediate Surveys

Author

Peca, Alessandro, Cappelluti, Nico, Marchesi, Stefano, Hodges-Kluck, Edmund, and Foord, Adi

Subjects
Astrophysics - Astrophysics of Galaxies, Astrophysics - High Energy Astrophysical Phenomena
Abstract

This study presents the capabilities of the AXIS telescope in estimating redshifts from X-ray spectra alone (X-ray redshifts, XZs). Through extensive simulations, we establish that AXIS observations enable reliable XZ estimates for more than 5500 obscured Active Galactic Nuclei (AGN) up to redshift $z\sim 6$ in the proposed deep (7 Ms) and intermediate (375 ks) surveys. Notably, at least 1600 of them are expected to be in the Compton-Thick regime ($\log N_H/\mathrm{cm^{-2}}\geq 24$), underscoring the pivotal role of AXIS in sample these elusive objects that continue to be poorly understood. XZs provide an efficient alternative for optical/infrared faint sources, overcoming the need for time-consuming spectroscopy, potential limitations of photometric redshifts, and potential issues related to multi-band counterpart association. This approach will significantly enhance the accuracy of constraints on the X-ray luminosity function and obscured AGN fractions up to high redshift. This White Paper is part of a series commissioned for the AXIS Probe Concept Mission; additional AXIS White Papers can be found at the AXIS website (http://axis.astro.umd.edu) with a mission overview here: arXiv:2311.00780.

Published
2023
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44. The evolution of galaxies and clusters at high spatial resolution with AXIS

Author

Russell, H. R., Lopez, L. A., Allen, S. W., Chartas, G., Choudhury, P. P., Dupke, R. A., Fabian, A. C., Flores, A. M., Garofali, K., Hodges-Kluck, E., Koss, M. J., Lanz, L., Lehmer, B. D., Li, J. -T., Maksym, W. P., Mantz, A. B., McDonald, M., Miller, E. D., Mushotzky, R. F., Qiu, Y., Reynolds, C. S., Tombesi, F., Tozzi, P., Trindade-Falcao, A., Walker, S. A., Wong, K. -W., Yukita, M., and Zhang, C.

Subjects
Astrophysics - Instrumentation and Methods for Astrophysics, Astrophysics - Astrophysics of Galaxies, Astrophysics - High Energy Astrophysical Phenomena
Abstract

Stellar and black hole feedback heat and disperse surrounding cold gas clouds, launching gas flows off circumnuclear and galactic disks and producing a dynamic interstellar medium. On large scales bordering the cosmic web, feedback drives enriched gas out of galaxies and groups, seeding the intergalactic medium with heavy elements. In this way, feedback shapes galaxy evolution by shutting down star formation and ultimately curtailing the growth of structure after the peak at redshift 2-3. To understand the complex interplay between gravity and feedback, we must resolve both the key physics within galaxies and map the impact of these processes over large scales, out into the cosmic web. The Advanced X-ray Imaging Satellite (AXIS) is a proposed X-ray probe mission for the 2030s with arcsecond spatial resolution, large effective area, and low background. AXIS will untangle the interactions of winds, radiation, jets, and supernovae with the surrounding ISM across the wide range of mass scales and large volumes driving galaxy evolution and trace the establishment of feedback back to the main event at cosmic noon., Comment: 29 pages, 18 figures; this white paper is part of a series commissioned for the AXIS Probe mission concept

Published
2023

45. The Distribution of Sandpile Groups of Random Graphs with their Pairings

Author

Hodges, Eliot

Subjects
Mathematics - Combinatorics, Mathematics - Number Theory, Mathematics - Probability, 05C80, 15B52, 60B20
Abstract

We determine the distribution of the sandpile group (also known as the Jacobian) of the Erd\H{o}s-R\'{e}nyi random graph $G(n,q)$ along with its canonical duality pairing as $n$ tends to infinity, fully resolving a conjecture from 2015 due to Clancy, Leake, and Payne and generalizing the result by Wood on the groups. In particular, we show that a finite abelian $p$-group $G$ equipped with a perfect symmetric pairing $\delta$ appears as the Sylow $p$-part of the sandpile group and its pairing with frequency inversely proportional to $|G||\mathrm{Aut}(G,\delta)|$, where $\mathrm{Aut}(G,\delta)$ is the set of automorphisms of $G$ preserving the pairing $\delta$. While this distribution is related to the Cohen-Lenstra distribution, the two distributions are not the same on account of the additional algebraic data of the pairing. The proof utilizes the moment method: we first compute a complete set of moments for our random variable (the average number of epimorphisms from our random object to a fixed object in the category of interest) and then show the moments determine the distribution. To obtain the moments, we prove a universality result for the moments of cokernels of random symmetric integral matrices whose dual groups are equipped with symmetric pairings that is strong enough to handle both the dependence in the diagonal entries and the additional data of the pairing. We then apply results due to Sawin and Wood to show that these moments determine a unique distribution., Comment: 43 pages

Published
2023

46. Overview of the Advanced X-ray Imaging Satellite (AXIS)

Author

Reynolds, Christopher S., Kara, Erin A., Mushotzky, Richard F., Ptak, Andrew, Koss, Michael J., Williams, Brian J., Allen, Steven W., Bauer, Franz E., Bautz, Marshall, Bodaghee, Arash, Burdge, Kevin B., Cappelluti, Nico, Cenko, Brad, Chartas, George, Chan, Kai-Wing, Corrales, Lía, Daylan, Tansu, Falcone, Abraham D., Foord, Adi, Grant, Catherine E., Habouzit, Mélanie, Haggard, Daryl, Herrmann, Sven, Hodges-Kluck, Edmund, Kargaltsev, Oleg, King, George W., Kounkel, Marina, Lopez, Laura A., Marchesi, Stefano, McDonald, Michael, Meyer, Eileen, Miller, Eric D., Nynka, Melania, Okajima, Takashi, Pacucci, Fabio, Russell, Helen R., Safi-Harb, Samar, Stassun, Keivan G., Falcão, Anna Trindade, Walker, Stephen A., Wilms, Joern, Yukita, Mihoko, and Zhang, William W.

Subjects
Astrophysics - Instrumentation and Methods for Astrophysics, Astrophysics - High Energy Astrophysical Phenomena
Abstract

The Advanced X-ray Imaging Satellite (AXIS) is a Probe-class concept that will build on the legacy of the Chandra X-ray Observatory by providing low-background, arcsecond-resolution imaging in the 0.3-10 keV band across a 450 arcminute$^2$ field of view, with an order of magnitude improvement in sensitivity. AXIS utilizes breakthroughs in the construction of lightweight segmented X-ray optics using single-crystal silicon, and developments in the fabrication of large-format, small-pixel, high readout rate CCD detectors with good spectral resolution, allowing a robust and cost-effective design. Further, AXIS will be responsive to target-of-opportunity alerts and, with onboard transient detection, will be a powerful facility for studying the time-varying X-ray universe, following on from the legacy of the Neil Gehrels (Swift) X-ray observatory that revolutionized studies of the transient X-ray Universe. In this paper, we present an overview of AXIS, highlighting the prime science objectives driving the AXIS concept and how the observatory design will achieve these objectives., Comment: Published in Proceedings of SPIE Optics & Photonics 2023, San Diego

Published
2023
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