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Contains fulltext : 292018.pdf (Publisher’s version ) (Open Access), This file contains raw X-ray fluorescence and line scan data of regular 'Knox cyclothem' alternations in two short intervals (J45de and J60d) of drill-core DD98SGP001. Core DD98SGP001 contains banded iron formation of the lower Paleoproterozoic Joffre Member of the Brockman Iron Formation and was drilled in 1998 at Silvergrass Peak (22 03'29.9''S, 116 50' 06.0''E) in the Hamersley Range, Western Australia; the core is currently stored at the Perth Core Library of the Geological Survey of Western Australia. The scanned interval J45de is from 289.05 - 290.26 m depth in the core (box 45, rows d and e) and contains cherty iron formation-type cyclothems. The scanned interval 60d is from 358.34 - 358.73 m depth in the core (box 60, row d) and contains shaley carbonate-type cyclothems. (2023-03-22)

The eastern Mediterranean Sea (EMS) sedimentary record is periodically interspersed with organic-rich ‘sapropel’ layers. Sapropels are characteristic of basin-wide anoxic events, triggered by precession-forced insolation maxima. Relatively subdued insolation maxima, however, are not always expressed as distinct sapropel events. The EMS sedimentary record is thus useful to investigate feedbacks between marine anoxia and the nitrogen (N) cycle and offers an analogue for modern deoxygenation and past oceanic anoxic events. To this end, we investigated a ∼68 kyr sedimentary record from the EMS containing the well-established sapropel S1 (deposited in two phases: S1a [∼10.5–8.5 ka BP] and S1b [∼7.8–6.1 ka BP]) and sediments timed to the ambiguous S2 sapropel (∼53 ka BP). We used lipid biomarkers of microorganisms to reconstruct key N-cycle components: (1) anaerobic ammonium oxidation (anammox) using ladderanes and a stereoisomer of bacteriohopanetetrol (BHT-x), (2) dinitrogen gas (N2) fixation using heterocyte glycolipids, and (3) nitrification by Thaumarchaeota using crenarchaeol. Additionally, benthic foraminifera and trace metals (U, Mo, Mn) were used to reconstruct redox conditions. During S1a, abundances of Thaumarchaeota increased, likely promoted by elevated high-nutrient freshwater discharge. At this time, a combination of phosphorus supply and intensified loss of bioavailable N via water column anammox, may have reinforced anoxia by favoring diatom-diazotroph associations. During S1b, anammox is equally intense. Yet, no positive feedback on N2-fixation is observed, likely because diazotrophs were phosphorus limited. Instead, anammox may have provided negative feedback on anoxia by quenching primary production. Ladderanes suggest additional episodes of anammox between ∼69 to 39 cal ka BP, corresponding to brief periods of water column deoxygenation. Anoxia likely occurred at the sediment–water interface in S2-timed sediments (53–51 ca

In marine sediments, the Sr content and isotope composition (87 Sr/86Sr) of the terrigenous detrital component are widely used to track changes in provenance and related transport and weathering processes. Accurately separating detrital-Sr from other sedimentary Sr-phases is a prerequisite for such studies. Conventionally, it is assumed that Sr in the carbonate-free residue corresponds to detrital Sr alone. However, the decarbonated residue may contain barite with significant Sr content and a non-detrital 87Sr/86Sr composition; this may substantially affect the measured Sr signal. To examine this chronically overlooked phenomenon, the Mediterranean Sea is an ideal areabecause 1) detailed provenance studies have been done using Sr and 87Sr/86Sr of the residual fraction, and 2) enhanced levels of barite repeatedly occurred in association with distinct, organic-rich sapropel sediments.

In eastern Mediterranean sediments, the titanium-to-aluminum ratio () captures relative variability in eolian to river-derived material and predominantly integrates climate signals over the Saharan and Sahel regions. Long time series can, therefore, provide valuable records of North African humidity and aridity changes. X-ray fluorescence core scanning (XRF-CS) can generate near-continuous records with relatively modest effort and in an acceptable amount of time, provided that accurate values are acquired. Calibration of raw XRF-CS data to those of established analytical methods is an important pathway for obtaining the required accuracy. We assess how to obtain reliable XRF-CS calibration by using different calibration reference sample sets for a long sediment record from ODP Site 967 (eastern Mediterranean Sea). The accuracy of reference concentrations and the number of reference samples are important for reliable calibration. Our continuous record allows detailed time series analysis over the past 3 Myr. Near-direct control of low-latitude insolation on the timing and amplitude of North African aridity and humidity is observed from 3 to ∼ 1.2 Ma. In our record, most arid North African intervals (i.e., with the longest period and highest amplitude) occur after the mid-Pleistocene transition (MPT; ∼ 1.2–0.7 Ma), when ice ages intensified. We also observe a subdued relationship between low-latitude insolation and North African climate after the MPT. These findings support the growing consensus that African climate became more sensitive to remote high-latitude climate when a threshold ice volume was reached during the MPT.

Catastrophic floods have formed deep bedrock canyons on Earth, but the relationship between peak discharge and bedrock erosion is not clearly understood. This hinders efforts to use geological evidence of these cataclysmic events to constrain their magnitude – a prerequisite for impact assessments. Here, we combine proxy evidence from slackwater sediments with topographic models and hydraulic simulations to constrain the Late Holocene flood history of the Jökulsá á Fjöllum river in northern Iceland. We date floods to 3.5, 1.5 and 1.35 thousand years ago and confirm that flow peaks during these events were at most a third of previous estimates. Nevertheless, exposure ages suggests that nearby knickpoints retreated by more than 2 km during these floods. These findings support a growing consensus that the extent of bedrock erosion is not necessarily controlled by discharge and that canyon-carving floods may be smaller than typically assumed.

The laminated sediment record from Laguna Pallcacocha, Ecuador, is widely used as a sensitive recorder of past variability in the El Niño-Southern Oscillation. However, limited knowledge of local meteorology, hydrogeomorphic processes, and the lateral variability of the lacustrine stratigraphy have resulted in some ambiguity in proxy interpretation. In this study, we report new high-resolution meteorological data, hydrogeomorphic mapping of the catchment and geochemistry of the lake’s sediments. We show that the fine clastic layers are deposited from alluvial activity in the catchment related to intensive rainfall events originating from the Pacific. Frequency analyses of the geochemistry of the sediments indicates that the clastic layers in L. Pallcacocha fall into the characteristic ENSO frequency band and most likely record Eastern Pacific and Coastal Pacific El Niño events. We also illustrate that recent debris flow deposition has resulted in an abrupt avulsion of the main fluvial channels, redirecting sediment input between the lake’s two basins and possibly influencing the lithostratigraphy of the sediment package of L. Pallcacocha.

Multi-element analysis of discrete samples via X-Ray fluorescence or inductively coupled plasma spectrometry is commonly used to characterise the composition of solid geo-materials for environmental geochemical characterisation. Conventional geochemical analysis of individual samples is time consuming and costly, which often results in low-resolution sampling with the danger of missing crucial information. X-ray fluorescence Core Scanning (XCS) provides an alternative method to obtain elemental information, which can be potentially used quantitatively when combined with the Multivariate Log-ratio Calibration (MLC) approach. The suitability of the XCS-MLC method was tested for environmental geochemical characterisation on four terrestrial Holocene-Pleistocene sediment cores that have a variable lithology (clay, sand, peat, with variable calcareous content), were stored at ambient room conditions and scanned post sampling. Element contents based on XCS-MLC and conventional geochemical analysis proved to be comparable (R2 > 0.5) for Al, Ca, Cr, Fe, K, Sr, Mn, Ni, Pb, Rb, S, Si, Ti, Zn, Zr, and also for Br as proxy for organicmatter. For As, Cu and Ba the correlations were less satisfactory (R 2 < 0.4) partially due to the low concentration ranges present in these sediments. For some samples aberrant high values for Ca, Fe, S, and Zn were introduced by application of the MLC method due to extrapolation outside the MLC-calibrated range. Similar to the conventional element analyses the XCS-MLC approach has the ability to retrieve quantitative element contents and enable the calculation of mineral phases such as calcium carbonate and reactive iron species. Both conventional and XCS-MLC methods reproduced the average contents per sediment layer and mostly their ranges. Nevertheless, local features such as diagenetic enrichments were not always evident from the discrete samples. Thus, a better understanding of the spatial heterogeneity in geochemica

Large fluvial systems, such as the Nile River, allow a basin-scale integrated view of climatological and environmental changes. In this study, we reconstructed the Nile discharge history for the last 20 ka using molecular ratios of glycerol dialkyl glycerol tetraethers (GDGTs) and neodymium (Nd) radiogenic isotopes. By characterizing both the organic and inorganic fractions, we assessed the relevance of the GDGT-based proxies in deltaic environments as tracers of terrigenous origin. A large increase in Nile discharge is documented from 14.8 to 8.4 ka BP reflecting enhanced physical erosion and transport processes from the Ethiopian Traps. We confirmed the primary control of insolation on precipitation on North East Africa through the last 20 ka. The centennial time resolution reached on the sedimentary sequence revealed a step-wise onset and termination of the African Humid Period (AHP) starting at 14.8 ka and ending at 8.4 ka BP, respectively. Our centennial-millennial records allowed furthermore pinpointing the abrupt periods of arid conditions corresponding to the Younger Dryas. These data illustrate the linkage between low and high latitude hydrological variability.

Background: Ultrarare Marshall–Smith and Malan syndromes, caused by changes of the gene nuclear factor I X (NFIX), are characterised by intellectual disability (ID) and behavioural problems, although questions remain. Here, development and behaviour are studied and compared in a cross-sectional study, and results are presented with genetic findings. Methods: Behavioural phenotypes are compared of eight individuals with Marshall-Smith syndrome (three male individuals) and seven with Malan syndrome (four male individuals). Long-term follow-up assessment of cognition and adaptive behaviour was possible in three individuals with Marshall–Smith syndrome. Results: Marshall–Smith syndrome individuals have more severe ID, less adaptive behaviour, more impaired speech and less reciprocal interaction compared with individuals with Malan syndrome. Sensory processing difficulties occur in both syndromes. Follow-up measurement of cognition and adaptive behaviour in Marshall–Smith syndrome shows different individual learning curves over time. Conclusions: Results show significant between and within syndrome variability. Different NFIX variants underlie distinct clinical phenotypes leading to separate entities. Cognitive, adaptive and sensory impairments are common in both syndromes and increase the risk of challenging behaviour. This study highlights the value of considering behaviour within developmental and environmental context. To improve quality of life, adaptations to environment and treatment are suggested to create a better person-environment fit.

Purpose: Nontruncating variants in SMARCA2, encoding a catalytic subunit of SWI/SNF chromatin remodeling complex, cause Nicolaides–Baraitser syndrome (NCBRS), a condition with intellectual disability and multiple congenital anomalies. Other disorders due to SMARCA2 are unknown. Methods: By next-generation sequencing, we identified candidate variants in SMARCA2 in 20 individuals from 18 families with a syndromic neurodevelopmental disorder not consistent with NCBRS. To stratify variant interpretation, we functionally analyzed SMARCA2 variants in yeasts and performed transcriptomic and genome methylation analyses on blood leukocytes. Results: Of 20 individuals, 14 showed a recognizable phenotype with recurrent features including epicanthal folds, blepharophimosis, and downturned nasal tip along with variable degree of intellectual disability (or blepharophimosis intellectual disability syndrome [BIS]). In contrast to most NCBRS variants, all SMARCA2 variants associated with BIS are localized outside the helicase domains. Yeast phenotype assays differentiated NCBRS from non-NCBRS SMARCA2 variants. Transcriptomic and DNA methylation signatures differentiated NCBRS from BIS and those with nonspecific phenotype. In the remaining six individuals with nonspecific dysmorphic features, clinical and molecular data did not permit variant reclassification. Conclusion: We identified a novel recognizable syndrome named BIS associated with clustered de novo SMARCA2 variants outside the helicase domains, phenotypically and molecularly distinct from NCBRS.