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1. Revision of the Quaternary calcareous nannofossil biochronology of Arctic Ocean sediments

Author: Razmjooei, Mohammad J., Henderiks, Jorijntje, Coxall, Helen K., Baumann, Karl-Heinz, Vermassen, Flor, Jakobsson, Martin, Niessen, Frank, and O'Regan, Matt
Published: 2023
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2. Late Neogene nannofossil assemblages as tracers of ocean circulation and paleoproductivity over the NW Australian shelf

Author: B.-T. Karatsolis and J. Henderiks
Subjects: Environmental pollution, TD172-193.5, Environmental protection, TD169-171.8, Environmental sciences, GE1-350
Abstract: Late Miocene to Pliocene sediments from the NW Australian shelf, drilled by the International Ocean Discovery Program (IODP) Expedition 356, provide unique records of paleoclimatic variations under warmer-than-present conditions. During the period from 6 to 3.5 Ma, the area was dominated by warm, tropical waters supplied by an intensified, uninterrupted Indonesian throughflow and was characterised by prevailing humid conditions, including increased precipitation and river runoff. Despite the available information regarding the general paleoclimatic conditions, little is known about the concurrent regional ocean circulation patterns and the relative strength of seasonally flowing boundary currents, such as the Leeuwin Current. In this study, we investigate two astronomically tuned calcareous nannofossil time series from IODP Sites U1463 and U1464 to track long-term changes in ocean circulation and water column stratification, which influences the availability of nutrients in the upper photic zone and is considered to be a primary control on the (paleo)productivity of marine phytoplankton. By documenting shifts in the dominant species within the nannofossil assemblages and comparing these to paleotemperature gradients between the NW Australian shelf and the eastern Indian Ocean, we identify a significant change in the ecological and oceanographic regime that occurred across the Miocene–Pliocene boundary (5.4–5.2 Ma), which can be attributed to an overall intensification of the upper water column mixing over the shelf. Significant changes in nannofossil abundance and species composition that reflect broader-scale processes and evolutionary events, such as the termination of the late Miocene to early Pliocene biogenic bloom in the eastern Indian Ocean (4.6–4.4 Ma) and the extinction of Sphenolithus spp. (∼3.54 Ma), occurred long after this regional regime shift.
Published: 2023
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3. Abrupt conclusion of the late Miocene-early Pliocene biogenic bloom at 4.6-4.4 Ma

Author: Karatsolis, B. – Th., Lougheed, B. C., De Vleeschouwer, D., and Henderiks, J.
Published: 2022
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4. Abrupt conclusion of the late Miocene-early Pliocene biogenic bloom at 4.6-4.4 Ma

Author: B. – Th. Karatsolis, B. C. Lougheed, D. De Vleeschouwer, and J. Henderiks
Subjects: Science
Abstract: What caused the end of the high ocean productivity in the tropics in late Miocene-early Pliocene is debated. Here, deep-sea sediment records reveal that productivity abruptly declined 4.6 million years ago, potentially linked to reduced seasonality and monsoon intensity that led to decreased nutrient supply to the oceans.
Published: 2022
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5. Trends in mortality in people with HIV from 1999 to 2020: a multi-cohort collaboration

Author: Tusch, E, Ryom, L, Pelchen-Matthews, A, Mocroft, A, Elbirt, D, Oprea, C, Günthard, H, Staehelin, C, Zangerle, R, Suarez, I, Vehreschild, J, Wit, F, Menozzi, M, d'Arminio Monforte, A, Spagnuolo, V, Pradier, C, Carlander, C, Suanzes, P, Wasmuth, J, Carr, A, Petoumenos, K, Borgans, F, Bonnet, F, De Wit, S, El-Sadr, W, Neesgaard, B, Jaschinski, N, Greenberg, L, Hosein, S, Gallant, J, Vannappagari, V, Young, L, Sabin, C, Lundgren, J, Peters, L, Reekie, J, Calvo, G, Dabis, F, Kirk, O, Law, M, Monforte, A, Morfeldt, L, Reiss, P, Weber, R, Lind-Thomsen, A, Brandt, R, Hillebreght, M, Zaheri, S, Scherrer, A, Schöni-Affolter, F, Rickenbach, M, Tavelli, A, Fanti, I, Leleux, O, Mourali, J, Marec, F, Boerg, E, Thulin, E, Sundström, A, Bartsch, G, Thompsen, G, Necsoi, C, Delforge, M, Fontas, E, Caissotti, C, Dollet, K, Mateu, S, Torres, F, Blance, A, Huang, R, Puhr, R, Laut, K, Kristensen, D, Phillips, A, Kamara, D, Smith, C, Hatleberg, C, Raben, D, Matthews, C, Bojesen, A, Grevsen, A, Powderly, B, Shortman, N, Moecklinghoff, C, Reilly, G, Franquet, X, Smit, C, Ross, M, Fux, C, Morlat, P, Friis-Møller, N, Kowalska, J, Bohlius, J, Bower, M, Fätkenheuer, G, Grulich, A, Sjøl, A, Meidahl, P, Iversen, J, Reiss, C, Hillebregt, M, Prins, J, Kuijpers, T, Scherpbier, H, van der Meer, J, Godfried, M, van der Poll, T, Nellen, F, Geerlings, S, van Vugt, M, Pajkrt, D, Bos, J, Wiersinga, W, van der Valk, M, Goorhuis, A, Hovius, J, van Eden, J, Henderiks, A, van Hes, A, Mutschelknauss, M, Nobel, H, Pijnappel, F, Jurriaans, S, Back, N, Zaaijer, H, Berkhout, B, Cornelissen, M, Schinkel, C, Thomas, X, Ziekenhuis, A, van den Berge, M, Stegeman, A, Baas, S, de Looff, L, Versteeg, D, Ziekenhuis, C, Pronk, M, Ammerlaan, H, De Munnik, E, Jansz, A, Tjhie, J, Wegdam, M, Deiman, B, Scharnhorst, V, van der Plas, A, Weijsenfeld, A, van der Ende, M, De Vries-Sluijs, T, van Gorp, E, Schurink, C, Nouwen, J, Verbon, A, Rijnders, B, Bax, H, van der Feltz, M, Bassant, N, van Beek, J, Vriesde, M, van Zonneveld, L, de Oude-Lubbers, A, van den Berg-Cameron, H, Bruinsma-Broekman, F, de Groot, J, de Man, M, Boucher, C, Koopmans, M, van Kampen, J, Pas, S, Mc–sophia, E, Driessen, G, van Rossum, A, van der Knaap, L, Visser, E, Branger, J, Rijkeboer-Mes, A, de Ven, C, Ziekenhuis, H, Schippers, E, van Nieuwkoop, C, van IJperen, J, Geilings, J, van der Hut, G, Franck, P, van Eeden, A, Brokking, W, Groot, M, Elsenburg, L, Damen, M, Kwa, I, Groeneveld, P, Bouwhuis, J, van den Berg, J, van Hulzen, A, van der Bliek, G, Bor, P, Bloembergen, P, Wolfhagen, M, Ruijs, G, Kroon, F, de Boer, M, Bauer, M, Jolink, H, Vollaard, A, Dorama, W, van Holten, N, Claas, E, Wessels, E, den Hollander, J, Pogany, K, Roukens, A, Kastelijns, M, Smit, J, Smit, E, Struik-Kalkman, D, Tearno, C, Bezemer, M, van Niekerk, T, Pontesilli, O, Lowe, S, Lashof, A, Posthouwer, D, Ackens, R, Schippers, J, Vergoossen, R, Weijenberg-Maes, B, van Loo, I, Havenith, T, Leyten, E, Gelinck, L, van Hartingsveld, A, Meerkerk, C, Wildenbeest, G, Mutsaers, J, Jansen, C, Mulder, J, Vrouenraets, S, Lauw, F, van Broekhuizen, M, Paap, H, Vlasblom, D, Smits, P, Zuiderzee, M, Weijer, S, El Moussaoui, R, Bosma, A, van Vonderen, M, van Houte, D, Kampschreur, L, Dijkstra, K, Faber, S, Weel, J, Kootstra, G, Delsing, C, van der Burg-van de Plas, M, Heins, H, Lucas, E, Kortmann, W, van Twillert, G, Stuart, J, Diederen, B, Pronk, D, van Truijen-Oud, F, van der Reijden, W, Jansen, R, Brinkman, K, van den Berk, G, Blok, W, Frissen, P, Lettinga, K, Schouten, W, Veenstra, J, Brouwer, C, Geerders, G, Hoeksema, K, Kleene, M, van der Meché, I, Spelbrink, M, Sulman, H, Toonen, A, Wijnands, S, Kwa, D, Witte, E, Koopmans, P, Keuter, M, van der Ven, A, ter Hofstede, H, Dofferhoff, A, van Crevel, R, Albers, M, Bosch, M, Grintjes-Huisman, K, Zomer, B, Stelma, F, Rahamat-Langendoen, J, Burger, D, Richter, C, Gisolf, E, Hassing, R, ter Beest, G, van Bentum, P, Langebeek, N, Tiemessen, R, Swanink, C, van Lelyveld, S, Soetekouw, R, Hulshoff, N, van der Prijt, L, van der Swaluw, J, Bermon, N, Herpers, B, Veenendaal, D, Verhagen, D, van Wijk, M, Ziekenhuis, S, van Kasteren, M, Brouwer, A, de Wiel, B, Kuipers, M, Santegoets, R, van der Ven, B, Marcelis, J, Buiting, A, Kabel, P, Bierman, W, Scholvinck, H, Wilting, K, Stienstra, Y, Jonge, H, van der Meulen, P, de Weerd, D, Ludwig-Roukema, J, Niesters, H, Riezebos-Brilman, A, van Leer-Buter, C, Knoester, M, Hoepelman, A, Mudrikova, T, Ellerbroek, P, Oosterheert, J, Arends, J, Barth, R, Wassenberg, M, Schadd, E, van Elst-Laurijssen, D, van Oers-Hazelzet, E, Vervoort, S, van Berkel, M, Schuurman, R, Verduyn-Lunel, F, Wensing, A, Peters, E, van Agtmael, M, Bomers, M, de Vocht, J, Heitmuller, M, Laan, L, Pettersson, A, Vandenbroucke-Grauls, C, Ang, C, Kinderziekenhuis, W, Geelen, S, Wolfs, T, Bont, L, Nauta, N, Bezemer, D, van Sighem, A, Boender, T, de Jong, A, Bergsma, D, Hoekstra, P, de Lang, A, Grivell, S, Jansen, A, Rademaker, M, Raethke, M, Meijering, R, Schnörr, S, de Groot, L, van den Akker, M, Bakker, Y, Claessen, E, El Berkaoui, A, Koops, J, Kruijne, E, Lodewijk, C, Munjishvili, L, Peeck, B, Ree, C, Regtop, R, Ruijs, Y, Rutkens, T, van de Sande, L, Schoorl, M, Timmerman, A, Tuijn, E, Veenenberg, L, van der Vliet, S, Wisse, A, Woudstra, T, Tuk, B, Dupon, M, Gaborieau, V, Lacoste, D, Malvy, D, Mercié, P, Neau, D, Pellegrin, J, Tchamgoué, S, Lazaro, E, Cazanave, C, Vandenhende, M, Vareil, M, Gérard, Y, Blanco, P, Bouchet, S, Breilh, D, Fleury, H, Pellegrin, I, Chêne, G, Thiébaut, R, Wittkop, L, Lawson-Ayayi, S, Gimbert, A, Desjardin, S, Lacaze-Buzy, L, Petrov-Sanchez, V, André, K, Bernard, N, Caubet, O, Caunegre, L, Chossat, I, Courtault, C, Dauchy, F, De Witte, S, Dondia, D, Duffau, P, Dutronc, H, Farbos, S, Faure, I, Ferrand, H, Gerard, Y, Greib, C, Hessamfar, M, Imbert, Y, Lataste, P, Marie, J, Mechain, M, Monlun, E, Ochoa, A, Pistone, T, Raymond, I, Receveur, M, Rispal, P, Sorin, L, Valette, C, Viallard, J, Wille, H, Wirth, G, Lafon, M, Trimoulet, P, Bellecave, P, Tumiotto, C, Haramburu, F, Miremeont-Salamé, G, Blaizeau, M, Decoin, M, Hannapier, C, Lenaud, E, Pougetoux, A, Delveaux, S, D’Ivernois, C, Diarra, F, Uwamaliya-Nziyumvira, B, Palmer, G, Conte, V, Sapparrart, V, Law, C, Moore, R, Edwards, S, Hoy, J, Watson, K, Roth, N, Lau, H, Bloch, M, Baker, D, Cooper, D, O’Sullivan, M, Nolan, D, Guelfi, G, Calvo, C, Domingo, P, Sambeat, M, Gatell, J, Del Cacho, E, Cadafalch, J, Fuster, M, Codina, C, Sirera, G, Vaqué, A, Clumeck, N, Gennotte, A, Gerard, M, Kabeya, K, Konopnicki, D, Libois, A, Martin, C, Payen, M, Semaille, P, Van Laethem, Y, Neaton, C, Krum, E, Thompson, G, Wentworth, D, Luskin-Hawk, R, Telzak, E, Abrams, D, Cohn, D, Markowitz, N, Arduino, R, Mushatt, D, Friedland, G, Perez, G, Tedaldi, E, Fisher, E, Gordin, F, Crane, L, Sampson, J, Baxter, J, Gazzard, B, Horban, A, Karpov, I, Losso, M, Pedersen, C, Ristola, M, Rockstroh, J, Fischer, A, Larsen, J, Podlekareva, D, Cozzi-Lepri, A, Shepherd, L, Schultze, A, Amele, S, Kundro, M, Schmied, B, Wien, P, Vassilenko, A, Mitsura, V, Paduto, D, Florence, E, Vandekerckhove, L, Hadziosmanovic, V, Begovac, J, Machala, L, Jilich, D, Sedlacek, D, Kronborg, G, Benfield, T, Gerstoft, J, Katzenstein, T, Møller, N, Ostergaard, L, Wiese, L, Nielsen, L, Zilmer, K, Smidt, J, Siseklinik, N, Aho, I, Viard, J, Duvivier, C, Schmidt, R, Degen, O, Stellbrink, H, Stefan, C, Goethe, J, Bogner, J, Chkhartishvili, N, Gargalianos, P, Xylomenos, G, Armenis, K, Sambatakou, H, Szlávik, J, Gottfredsson, M, Mulcahy, F, Yust, I, Turner, D, Burke, M, Shahar, E, Hassoun, G, Elinav, H, Haouzi, M, Sthoeger, Z, Esposito, R, Mazeu, I, Mussini, C, Mazzotta, F, Gabbuti, A, Annunziata, O, Vullo, V, Lichtner, M, Zaccarelli, M, Antinori, A, Acinapura, R, Plazzi, M, Lazzarin, A, Castagna, A, Gianotti, N, Galli, M, Ridolfo, A, Rozentale, B, Uzdaviniene, V, Matulionyte, R, Staub, T, Hemmer, R, Ormaasen, V, Maeland, A, Bruun, J, Knysz, B, Gasiorowski, J, Inglot, M, Bakowska, E, Flisiak, R, Grzeszczuk, A, Parczewski, M, Maciejewska, K, Aksak-Was, B, Beniowski, M, Mularska, E, Smiatacz, T, Gensing, M, Jablonowska, E, Malolepsza, E, Wojcik, K, Mozer-Lisewska, I, Caldeira, L, Mansinho, K, Maltez, F, Radoi, R, Panteleev, A, Panteleev, O, Yakovlev, A, Trofimora, T, Khromova, I, Kuzovatova, E, Blokhina, I, Novogrod, N, Borodulina, E, Vdoushkina, E, Jevtovic, D, Tomazic, J, Miró, J, Moreno, S, Rodriguez, J, Clotet, B, Jou, A, Paredes, R, Tural, C, Puig, J, Bravo, I, Gutierrez, M, Mateo, G, Laporte, J, Sonnerborg, A, Brännström, I, Flamholc, L, Cavassini, M, Calmy, A, Furrer, H, Battegay, M, Schmid, P, Kuznetsova, A, Kyselyova, G, Sluzhynska, M, Johnson, A, Simons, E, Johnson, M, Orkin, C, Weber, J, Scullard, G, Clarke, A, Leen, C, Morfeldt, C, Thulin, G, Åkerlund, B, Koppel, K, Karlsson, A, Håkangård, C, Castelli, F, Cauda, R, Perri, G, Iardino, R, Ippolito, G, Marchetti, G, Perno, C, von Schloesser, F, Viale, P, Ceccherini-Silberstein, F, Girardi, E, Caputo, S, Puoti, M, Andreoni, M, Ammassari, A, Balotta, C, Bandera, A, Bonfanti, P, Bonora, S, Borderi, M, Calcagno, A, Calza, L, Capobianchi, M, Cingolani, A, Cinque, P, De Luca, A, Biagio, A, Gori, A, Guaraldi, G, Lapadula, G, Madeddu, G, Maggiolo, F, Marcotullio, S, Monno, L, Nozza, S, Roldan, E, Rossotti, R, Rusconi, S, Santoro, M, Saracino, A, Galli, L, Lorenzini, P, Rodano, A, Shanyinde, M, Carletti, F, Carrara, S, Caro, A, Graziano, S, Petrone, F, Prota, G, Quartu, S, Truffa, S, Giacometti, A, Costantini, A, Barocci, V, Angarano, G, Santoro, C, Suardi, C, Donati, V, Verucchi, G, Minardi, C, Quirino, T, Abeli, C, Manconi, P, Piano, P, Cacopardo, B, Celesia, B, Vecchiet, J, Falasca, K, Pan, A, Lorenzotti, S, Sighinolfi, L, Segala, D, Vichi, F, Cassola, G, Viscoli, C, Alessandrini, A, Bobbio, N, Mazzarello, G, Mastroianni, C, Belvisi, V, Caramma, I, Chiodera, A, Milini, P, Rizzardini, G, Moioli, M, Piolini, R, Salpietro, S, Tincati, C, Puzzolante, C, Abrescia, N, Chirianni, A, Borgia, G, Orlando, R, Bonadies, G, Martino, F, Gentile, I, Maddaloni, L, Cattelan, A, Marinello, S, Cascio, A, Colomba, C, Baldelli, F, Schiaroli, E, Parruti, G, Sozio, F, Magnani, G, Ursitti, M, Cristaudo, A, Baldin, G, Capozzi, M, Cicalini, S, Sulekova, L, Iaiani, G, Latini, A, Mastrorosa, I, Savinelli, S, Vergori, A, Cecchetto, M, Viviani, F, Bagella, P, Rossetti, B, Franco, A, Del Vecchio, R, Francisci, D, Giuli, C, Caramello, P, Orofino, G, Sciandra, M, Bassetti, M, Londero, A, Pellizzer, G, Manfrin, V, Starnini, G, Ialungo, A, Central, C, Dellamonica, P, Bernard, E, Courjon, J, Cua, E, De Salvador-Guillouet, F, Durant, J, Etienne, C, Ferrando, S, Mondain-Miton, V, Naqvi, A, Perbost, I, Pillet, S, Prouvost-Keller, B, Pugliese, P, Rio, V, Risso, K, Roger, P, Aubert, V, Bernasconi, E, Böni, J, Braun, D, Bucher, H, Ciuffi, A, Dollenmaier, G, Egger, M, Elzi, L, Fehr, J, Fellay, J, Haerry, D, Hasse, B, Hirsch, H, Hoffmann, M, Hösli, I, Kahlert, C, Kaiser, L, Keiser, O, Klimkait, T, Kouyos, R, Kovari, H, Ledergerber, B, Martinetti, G, de Tejada, B, Marzolini, C, Metzner, K, Müller, N, Nicca, D, Pantaleo, G, Paioni, P, Rauch, A, Rudin, C, Speck, R, Stöckle, M, Tarr, P, Trkola, A, Vernazza, P, Wandeler, G, Yerly, S, Valk, M, Hutchinson, J, Rupasinghe, D, Han, W, Appoyer, H, Vera, J, Broster, B, Barbour, L, Carney, D, Greenland, L, Coughlan, R, Saint-Pierre, C, Stephan, C, Bucht, M, Chokoshvili, O, Borghi, V, Casabona, J, Miro, J, Lampe, F, Burns, F, Chaloner, C, Muccini, C, Lolatto, R, Sönnerborg, A, Nowak, P, Vesterbacka, J, Mattsson, L, Carrick, D, Stigsäter, K, Kusejko, K, Schulze, N, Franke, B, Rooney, J, Mcnicholl, I, Garges, H, Campo, R, Volny-Anne, A, Dedes, N, Williams, E, Bruguera, A, Volny-Anne, R, Mendão, L, Timiryasova, A, Fursa, O, Jakobsen, M, Kraef, C, Gardizi, M, Andersen, K, Kumar, L, Elsing, T, Shahi, S, Valdenmaiier, O, Bansi-Matharu, L, Byonanebye, D, Bannister, W, Roen, A, Null, N, Tusch, Erich, Ryom, Lene, Pelchen-Matthews, Annegret, Mocroft, Amanda, Elbirt, Daniel, Oprea, Cristiana, Günthard, Huldrych F, Staehelin, Cornelia, Zangerle, Robert, Suarez, Isabelle, Vehreschild, Jörg Janne, Wit, Ferdinand, Menozzi, Marianna, d'Arminio Monforte, Antonella, Spagnuolo, Vincenzo, Pradier, Christian, Carlander, Christina, Suanzes, Paula, Wasmuth, Jan-Christian, Carr, Andrew, Petoumenos, Kathy, Borgans, Frauke, Bonnet, Fabrice, De Wit, Stephane, El-Sadr, Wafaa, Neesgaard, Bastian, Jaschinski, Nadine, Greenberg, Lauren, Hosein, Sean R, Gallant, Joel, Vannappagari, Vani, Young, Lital, Sabin, Caroline, Lundgren, Jens, Peters, Lars, Reekie, Joanne, Monforte, A d’Arminio, Brandt, R Salbøl, Wit, F W N M, Marec, F Le, Laut, K Grønborg, Sabin, C A, Phillips, A N, Kamara, D A, Smith, C J, Hatleberg, C I, Brandt, R S, Grevsen, A L, Lundgren, J D, Fux, C A, Monforte, A d'Arminio, Iversen, J S, Reiss, Central P, Prins, J M, Kuijpers, T W, Scherpbier, H J, van der Meer, J T M, Godfried, M H, Nellen, F J B, Geerlings, S E, Bos, J C, Wiersinga, W J, Hovius, J W, van Hes, A M H, Nobel, H E, Pijnappel, F J J, Back, N K T, Zaaijer, H L, Cornelissen, M T E, Schinkel, C J, Thomas, X V, Ziekenhuis, Admiraal De Ruyter, de Looff, L Hage, Ziekenhuis, Catharina, Pronk, M J H, Ammerlaan, H S M, De Munnik, E S, Jansz, A R, Wegdam, M C A, Weijsenfeld, A M, van der Ende, M E, De Vries-Sluijs, T E M S, van Gorp, E C M, Schurink, C A M, Nouwen, J L, Rijnders, B J A, Bax, H I, van Beek, J E A, van Zonneveld, L M, van den Berg-Cameron, H J, Bruinsma-Broekman, F B, de Man, M de Zeeuw, Boucher, C A B, Koopmans, M P G, van Kampen, J J A, Pas, S D, MC–Sophia, Erasmus, Driessen, G J A, van Rossum, A M C, van der Knaap, L C, de Ven, C J H M Duijf-van, Ziekenhuis, Haga, Schippers, E F, van IJperen, J M, Franck, P F H, Elsenburg, L J M, Kwa, I S, Groeneveld, P H P, Bouwhuis, J W, van den Berg, J F, van Hulzen, A G W, van der Bliek, G L, Bor, P C J, Wolfhagen, M J H M, Ruijs, G J H M, Kroon, F P, de Boer, M G J, Bauer, M P, Vollaard, A M, Claas, E C J, den Hollander, J G, Smit, J V, Lowe, S H, Lashof, A M L Oude, Ackens, R P, van Loo, I H M, Havenith, T R A, Leyten, E M S, Gelinck, L B S, Wildenbeest, G S, Mutsaers, J A E M, Jansen, C L, Mulder, J W, Vrouenraets, S M E, Lauw, F N, van Broekhuizen, M C, Vlasblom, D J, Smits, P H M, Zuiderzee, M C, Bosma, A S, van Vonderen, M G A, van Houte, D P F, Kampschreur, L M, Kootstra, G J, Delsing, C E, Stuart, J W T Cohen, Diederen, B M W, van Truijen-Oud, F A, van der Reijden, W A, van den Berk, G E L, Blok, W L, Frissen, P H J, Lettinga, K D, Schouten, W E M, Brouwer, C J, Geerders, G F, Kleene, M J, van der Meché, I B, Toonen, A J M, Koopmans, P P, van der Ven, A J A M, ter Hofstede, H J M, Dofferhoff, A S M, Bosch, M E W, Grintjes-Huisman, K J T, Zomer, B J, Stelma, F F, Gisolf, E H, Hassing, R J, van Bentum, P H M, Swanink, C M A, van Lelyveld, S F L, van der Prijt, L M M, Herpers, B L, Verhagen, D W M, Ziekenhuis, St Elisabeth, van Kasteren, M E E, Brouwer, A E, de Wiel, B A F M de Kruijf-van, 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Pijnappel, F J J, Back, N K T, Zaaijer, H L, Cornelissen, M T E, Schinkel, C J, Thomas, X V, Ziekenhuis, Admiraal De Ruyter, de Looff, L Hage, Ziekenhuis, Catharina, Pronk, M J H, Ammerlaan, H S M, De Munnik, E S, Jansz, A R, Wegdam, M C A, Weijsenfeld, A M, van der Ende, M E, De Vries-Sluijs, T E M S, van Gorp, E C M, Schurink, C A M, Nouwen, J L, Rijnders, B J A, Bax, H I, van Beek, J E A, van Zonneveld, L M, van den Berg-Cameron, H J, Bruinsma-Broekman, F B, de Man, M de Zeeuw, Boucher, C A B, Koopmans, M P G, van Kampen, J J A, Pas, S D, MC–Sophia, Erasmus, Driessen, G J A, van Rossum, A M C, van der Knaap, L C, de Ven, C J H M Duijf-van, Ziekenhuis, Haga, Schippers, E F, van IJperen, J M, Franck, P F H, Elsenburg, L J M, Kwa, I S, Groeneveld, P H P, Bouwhuis, J W, van den Berg, J F, van Hulzen, A G W, van der Bliek, G L, Bor, P C J, Wolfhagen, M J H M, Ruijs, G J H M, Kroon, F P, de Boer, M G J, Bauer, M P, Vollaard, A M, Claas, E C J, den Hollander, J G, Smit, J V, Lowe, S H, Lashof, A M L Oude, Ackens, R P, van Loo, I H M, Havenith, T R A, Leyten, E M S, Gelinck, L B S, Wildenbeest, G S, Mutsaers, J A E M, Jansen, C L, Mulder, J W, Vrouenraets, S M E, Lauw, F N, van Broekhuizen, M C, Vlasblom, D J, Smits, P H M, Zuiderzee, M C, Bosma, A S, van Vonderen, M G A, van Houte, D P F, Kampschreur, L M, Kootstra, G J, Delsing, C E, Stuart, J W T Cohen, Diederen, B M W, van Truijen-Oud, F A, van der Reijden, W A, van den Berk, G E L, Blok, W L, Frissen, P H J, Lettinga, K D, Schouten, W E M, Brouwer, C J, Geerders, G F, Kleene, M J, van der Meché, I B, Toonen, A J M, Koopmans, P P, van der Ven, A J A M, ter Hofstede, H J M, Dofferhoff, A S M, Bosch, M E W, Grintjes-Huisman, K J T, Zomer, B J, Stelma, F F, Gisolf, E H, Hassing, R J, van Bentum, P H M, Swanink, C M A, van Lelyveld, S F L, van der Prijt, L M M, Herpers, B L, Verhagen, D W M, Ziekenhuis, St Elisabeth, van Kasteren, M E E, Brouwer, A E, de Wiel, B A F M de Kruijf-van, Santegoets, R M W J, Marcelis, J H, Buiting, A G M, Kabel, P J, Bierman, W F W, Wilting, K R, Jonge, H de Groot-de, van der Meulen, P A, de Weerd, D A, Niesters, H G M, van Leer-Buter, C C, Hoepelman, A I M, Ellerbroek, P M, Oosterheert, J J, Arends, J E, Barth, R E, Wassenberg, M W M, Schadd, E M, van Elst-Laurijssen, D H M, van Oers-Hazelzet, E E B, Wensing, A M J, Peters, E J G, van Agtmael, M A, Laan, L M, Pettersson, A M, Vandenbroucke-Grauls, C M J E, Ang, C W, Kinderziekenhuis, Wilhelmina, Geelen, S P M, Wolfs, T F W, Bont, L J, Bezemer, D O, van Sighem, A I, Boender, T S, Rademaker, M J, Pellegrin, J L, Vareil, M O, Dauchy, F A, Receveur, M C, Vandenhende, M A, Viallard, J F, Lafon, Me, Blaizeau, M J, Boerg, Eloïse, Law, Central M, Calvo, Central G, Sambeat, M A, Gennotte, A F, Payen, M C, Neaton, Central J, El-Sadr, W M, Abrams, D I, Crane, L R, Fischer, A H, Larsen, J F, Wien, Pulmologisches Zentrum der Stadt, Mitsura, V M, Møller, N F, Nielsen, L N, Smidt, Jelena, Siseklinik, Nakkusosakond, Viard, J-P, Stellbrink, H J, Goethe, J W, Sthoeger, Z M, Monforte, A D’Arminio, Annunziata, Ospedale S Maria, Blokhina, I N, Novogrod, Nizhny, Gatell, J M, Miró, J M, Rodriguez, J M, Laporte, J M, Johnson, A M, Johnson, M A, Morfeldt, Central L, Perri, G Di, Marchetti, G C, Perno, C F, Caputo, S Lo, Capobianchi, M R, Biagio, A Di, Roldan, E Quiros, Santoro, M M, Caro, A Di, Manconi, P E, Moioli, M C, Ridolfo, A L, Martino, F Di, Cattelan, A M, Ursitti, M A, Sulekova, L Fontanelli, Plazzi, M M, Del Vecchio, R Fontana, Giuli, C Di, Orofino, G C, Roger, P M, Braun, D L, Bucher, H C, Günthard, H F, Hirsch, H H, Kouyos, R D, de Tejada, B Martinez, Metzner, K J, Scherrer, A U, Valk, Marc vd, Han, W Min, Saint-Pierre, C H U, Miro, J M, Wasmuth, J C, Vehreschild, J J, McNicholl, I, Williams, E D, Volny-Anne, R Campo Alain, Dedes, Nikos, Mendão, Luis, Jakobsen, M L, Kumar, L Ramesh, Elsing, T W, and null, null
Abstract: Background: Mortality among people with HIV declined with the introduction of combination antiretroviral therapy. We investigated trends over time in all-cause and cause-specific mortality in people with HIV from 1999-2020. Methods: Data were collected from the D:A:D cohort from 1999 through January 2015 and RESPOND from October 2017 through 2020. Age-standardized all-cause and cause-specific mortality rates, classified using Coding Causes of Death in HIV (CoDe), were calculated. Poisson regression models were used to assess mortality trends over time. Results: Among 55716 participants followed for a median of 6 years (IQR 3-11), 5263 participants died (crude mortality rate [MR] 13.7/1000 PYFU; 95%CI 13.4-14.1). Changing patterns of mortality were observed with AIDS as the most common cause of death between 1999- 2009 (n = 952, MR 4.2/1000 PYFU; 95%CI 4.0-4.5) and non-AIDS defining malignancy (NADM) from 2010 -2020 (n = 444, MR 2.8/1000 PYFU; 95%CI 2.5-3.1). In multivariable analysis, all-cause mortality declined over time (adjusted mortality rate ratio [aMRR] 0.97 per year; 95%CI 0.96, 0.98), mostly from 1999 through 2010 (aMRR 0.96 per year; 95%CI 0.95-0.97), and with no decline shown from 2011 through 2020 (aMRR 1·00 per year; 95%CI 0·96-1·05). Mortality due all known causes except NADM also declined over the entire follow-up period. Conclusion: Mortality among people with HIV in the D:A:D and/or RESPOND cohorts decreased between 1999 and 2009 and was stable over the period from 2010 through 2020. The decline in mortality rates was not fully explained by improvements in immunologic-virologic status or other risk factors.
Published: 2024

6. A radical transition framework for the maritime innovator

Author: Henderiks, Jurn (author) and Henderiks, Jurn (author)
Abstract: The European Union has recently revealed a plan called ”Fit for 55.” The plan aims to reduce carbon dioxide emissions by 55% before 2030. It includes FuelEU Maritime, which will introduce new emission regulations for ships over 5000 gross tonnages. The regulations will require shipowners to reduce their carbon footprint. The European Union has decided not to wait for the International Maritime Organisation’s emission rules (IMO) and will enforce them for ships by 2024. By 2025, the rules will extend to offshore vessels with a gross tonnage of 400 or more and general cargo vessels carrying commercial goods between 400 and 5000 gross tonnages. Efforts are being made to find a hydrogen carrier that closely resembles conventional oil-based products to comply with these regulations. All these fuels need to be produced with renewable energy sources, which have their efficiency losses. Renewable fuel production is only estimated to have a chemical efficiency of 50%. Innovation in the shipping sector is necessary to reduce energy losses. The shipping sector fits the rules of rural society, where incremental innovations are preferred over radical changes. However, radical change is necessary to accomplish the energy transition in shipping. According to the DOI theory, innovators are the first group of adopters. Innovators are eager to try new ideas and have a cosmopolitan (global) network. These innovators will play a critical role in the energy transition in the shipping sector. The study’s objective is to analyse if it is possible to influence a given adoption of the innovator. First, the research outlines the theoretical framework for the study. The literature search aims to determine a transition framework to answer the research sub-questions. The framework’s scope will be refined to the innovator group and the maritime sector. A case study will be conducted to test the defined framework, and factors outside the scope may be included if needed. The literature, Marine Technology | Maritime Operations and Management
Published: 2024

7. Refining the alkenone-pCO2 method II: Towards resolving the physiological parameter ‘b’

Author: Zhang, Yi Ge, Henderiks, Jorijntje, and Liu, Xiaoqing
Published: 2020
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8. A 15-million-year-long record of phenotypic evolution in the heavily calcified coccolithophore Helicosphaera and its biogeochemical implications

Author: L. Šupraha and J. Henderiks
Subjects: Ecology, QH540-549.5, Life, QH501-531, Geology, QE1-996.5
Abstract: The biogeochemical impact of coccolithophores is defined not only by their overall abundance in the oceans but also by wide ranges in physiological traits such as cell size, degree of calcification and carbon production rates between different species. Species' sensitivity to environmental forcing has been suggested to relate to their cellular PIC : POC (particulate inorganic carbon : particulate organic carbon) ratio and other physiological constraints. Understanding both the short-term and longer-term adaptive strategies of different coccolithophore lineages, and how these in turn shape the biogeochemical role of the group, is therefore crucial for modeling the ongoing changes in the global carbon cycle. Here we present data on the phenotypic evolution of a large and heavily calcified genus Helicosphaera (order Zygodiscales) over the past 15 million years (Myr), at two deep-sea drill sites in the tropical Indian Ocean and temperate South Atlantic. The modern species Helicosphaera carteri, which displays ecophysiological adaptations in modern strains, was used to benchmark the use of its coccolith morphology as a physiological proxy in the fossil record. Our results show that, on the single-genotype level, coccolith morphology has no correlation with growth rates, cell size or PIC and POC production rates in H. carteri. However, significant correlations of coccolith morphometric parameters with cell size and physiological rates do emerge once multiple genotypes or closely related lineages are pooled together. Using this insight, we interpret the phenotypic evolution in Helicosphaera as a global, resource-limitation-driven selection for smaller cells, which appears to be a common adaptive trait among different coccolithophore lineages, from the warm and high-CO2 world of the middle Miocene to the cooler and low-CO2 conditions of the Pleistocene. However, despite a significant decrease in mean coccolith size and cell size, Helicosphaera kept a relatively stable PIC : POC ratio (as inferred from the coccolith aspect ratio) and thus highly conservative biogeochemical output on the cellular level. We argue that this supports its status as an obligate calcifier, like other large and heavily calcified genera such as Calcidiscus and Coccolithus, and that other adaptive strategies, beyond size adaptation, must support the persistent, albeit less abundant, occurrence of these taxa. This is in stark contrast with the ancestral lineage of Emiliania and Gephyrocapsa, which not only decreased in mean size but also displayed much higher phenotypic plasticity in their degree of calcification while becoming globally more dominant in plankton communities.
Published: 2020
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9. Phenotypic evolution studied by layered stochastic differential equations

Author: Reitan, Trond, Schweder, Tore, and Henderiks, Jorijntje
Subjects: Statistics - Applications
Abstract: Time series of cell size evolution in unicellular marine algae (division Haptophyta; Coccolithus lineage), covering 57 million years, are studied by a system of linear stochastic differential equations of hierarchical structure. The data consists of size measurements of fossilized calcite platelets (coccoliths) that cover the living cell, found in deep-sea sediment cores from six sites in the world oceans and dated to irregular points in time. To accommodate biological theory of populations tracking their fitness optima, and to allow potentially interpretable correlations in time and space, the model framework allows for an upper layer of partially observed site-specific population means, a layer of site-specific theoretical fitness optima and a bottom layer representing environmental and ecological processes. While the modeled process has many components, it is Gaussian and analytically tractable. A total of 710 model specifications within this framework are compared and inference is drawn with respect to model structure, evolutionary speed and the effect of global temperature., Comment: Published in at http://dx.doi.org/10.1214/12-AOAS559 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org)
Published: 2013
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10. Evolutionary Rates in the Haptophyta: Exploring Molecular and Phenotypic Diversity

Author: Jorijntje Henderiks, Daniela Sturm, Luka Šupraha, and Gerald Langer
Subjects: phytoplankton, haptophytes, coccolithophores, molecular phylogeny, coccoliths, marine fossil record, Naval architecture. Shipbuilding. Marine engineering, VM1-989, Oceanography, GC1-1581
Abstract: Haptophytes are photosynthetic protists found in both freshwater and marine environments with an origin possibly dating back to the Neoproterozoic era. The most recent molecular phylogeny reveals several haptophyte “mystery clades” that await morphological verification, but it is otherwise highly consistent with morphology-based phylogenies, including that of the coccolithophores (calcifying haptophytes). The fossil coccolith record offers unique insights into extinct lineages, including the adaptive radiations that produced extant descendant species. By combining molecular data of extant coccolithophores and phenotype-based studies of their ancestral lineages, it has become possible to probe the modes and rates of speciation in more detail, although this approach is still limited to only few taxa because of the lack of whole-genome datasets. The evolution of calcification likely involved several steps, but its origin can be traced back to an early association with organic scales typical for all haptophytes. Other key haptophyte traits, including the haplo-diplontic life cycle, are herein mapped upon the coccolithophorid phylogeny to help navigate a discussion of their ecological benefits and trade-offs in a rapidly changing ocean.
Published: 2022
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11. Haptophyta

Author: Eikrem, Wenche, Medlin, Linda K., Henderiks, Jorijntje, Rokitta, Sebastian, Rost, Björn, Probert, Ian, Throndsen, Jahn, Edvardsen, Bente, Archibald, John M., editor, Simpson, Alastair G.B., editor, and Slamovits, Claudio H., editor
Published: 2017
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12. Combination coccospheres from the Eastern Adriatic coast: New, verified and possible life-cycle associations

Author: Šupraha, Luka, Ljubešić, Zrinka, and Henderiks, Jorijntje
Published: 2018
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13. Reticulofenestra daviesii: Biostratigraphy and paleogeographic distribution across the Eocene–Oligocene boundary

Author: Bordiga, Manuela, Sulas, Camilla, and Henderiks, Jorijntje
Published: 2017
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14. Phosphorus limitation and heat stress decrease calcification in Emiliania huxleyi

Author: A. C. Gerecht, L. Šupraha, G. Langer, and J. Henderiks
Subjects: Ecology, QH540-549.5, Life, QH501-531, Geology, QE1-996.5
Abstract: Calcifying haptophytes (coccolithophores) sequester carbon in the form of organic and inorganic cellular components (coccoliths). We examined the effect of phosphorus (P) limitation and heat stress on particulate organic and inorganic carbon (calcite) production in the coccolithophore Emiliania huxleyi. Both environmental stressors are related to rising CO2 levels and affect carbon production in marine microalgae, which in turn impacts biogeochemical cycling. Using semi-continuous cultures, we show that P limitation and heat stress decrease the calcification rate in E. huxleyi. However, using batch cultures, we show that different culturing approaches (batch versus semi-continuous) induce different physiologies. This affects the ratio of particulate inorganic (PIC) to organic carbon (POC) and complicates general predictions on the effect of P limitation on the PIC ∕ POC ratio. We found heat stress to increase P requirements in E. huxleyi, possibly leading to lower standing stocks in a warmer ocean, especially if this is linked to lower nutrient input. In summary, the predicted rise in global temperature and resulting decrease in nutrient availability may decrease CO2 sequestration by E. huxleyi through lower overall carbon production. Additionally, the export of carbon may be diminished by a decrease in calcification and a weaker coccolith ballasting effect.
Published: 2018
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15. Risk for non-AIDS-defining and AIDS-defining cancer of early versus delayed initiation of antiretroviral therapy

Author: Chammartin, F., Lodi, S., Logan, R., Ryom, L., Mocroft, A., Kirk, O., D'Arminio Monforte, A., Reiss, P., Phillips, A., El-Sadr, W., Hatleberg, C. I., Pradier, C., Bonnet, F., Law, M., De Wit, S., Sabin, C., Lundgren, J. D., Bucher, H. C., Calvo, G., Dabis, F., Morfeldt, L., Weber, R., Lind-Thomsen, A., Salbol Brandt, R., Hillebreght, M., Zaheri, S., Wit, F. W. N. M., Scherrer, A., Schoni-Affolter, F., Rickenbach, M., Tavelli, A., Fanti, I., Leleux, O., Mourali, J., Le Marec, F., Boerg, E., Thulin, E., Sundstrom, A., Bartsch, G., Thompsen, G., Necsoi, C., Delforge, M., Fontas, E., Caissotti, C., Dollet, K., Mateu, S., Torres, F., Petoumenos, K., Blance, A., Huang, R., Puhr, R., Gronborg Laut, K., Kristensen, D., Kamara, D. A., Smith, C. J., Raben, D., Matthews, C., Bojesen, A., Grevsen, A. L., Powderly, B., Shortman, N., Moecklinghoff, C., Reilly, G., Smit, C., Ross, M., Fux, C. A., Morlat, P., Friis-Moller, N., Kowalska, J., Bohlius, J., Bower, M., Fatkenheuer, G., Grulich, A., Sjol, A., Meidahl, P., Iversen, J. S., Hillebregt, M., Prins, J. M., Kuijpers, T. W., Scherpbier, H. J., Van Der Meer, J. T. M., Godfried, M. H., Van Der Poll, T., Nellen, F. J. B., Geerlings, S. E., Van Vugt, M., Pajkrt, D., Bos, J. C., Wiersinga, W. J., Van Der Valk, M., Goorhuis, A., Hovius, J. W., Van Eden, J., Henderiks, A., Van Hes, A. M. H., Mutschelknauss, M., Nobel, H. E., Pijnappel, F. J. J., Jurriaans, S., Back, N. K. T., Zaaijer, H. L., Berkhout, B., Cornelissen, M. T. E., Schinkel, C. J., Thomas, X. V., Van Den Berge, M., Stegeman, A., Baas, S., Hage De Looff, L., Versteeg, D., Pronk, M. J. H., Ammerlaan, H. S. M., de Munnik, E. S., Jansz, A. R., Tjhie, J., Wegdam, M. C. A., Deiman, B., Scharnhorst, V., Van Der Plas, A., Weijsenfeld, A. M., Van Der Ende, M. E., de Vries-Sluijs, T. E. M. S., van Gorp, E. C. M., Schurink, C. A. M., Nouwen, J. L., Verbon, A., Rijnders, B. J. A., Bax, H. I., Van Der Feltz, M., Bassant, N., Van Beek, J. E. A., Vriesde, M., Van Zonneveld, L. M., De Oude-Lubbers, A., Van Den Berg-Cameron, H. J., Bruinsma-Broekman, F. B., de Groot, J., De Zeeuw-De Man, M., Boucher, C. A. B., Koopmans, M. P. G., van Kampen, J. J. A., Pas, S. D., Driessen, G. J. A., van Rossum, A. M. C., Van Der Knaap, L. C., Visser, E., Branger, J., Rijkeboer-Mes, A., Duijf-Van De Ven, C. J. H. M., Schippers, E. F., van Nieuwkoop, C., van IJperen, J. M., Geilings, J., van der Hut, G., Franck, P. F. H., Van Eeden, A., Brokking, W., Groot, M., Elsenburg, L. J. M., Damen, M., Kwa, I. S., Groeneveld, P. H. P., Bouwhuis, J. W., Van Den Berg, J. F., Van Hulzen, A. G. W., Van Der Bliek, G. L., Bor, P. C. J., Bloembergen, P., Wolfhagen, M. J. H. M., Ruijs, G. J. H. M., Kroon, F. P., De Boer, M. G. J., Bauer, M. P., Jolink, H., Vollaard, A. M., Dorama, W., Van Holten, N., Claas, E. C. J., Wessels, E., Den Hollander, J. G., Pogany, K., Roukens, A., Kastelijns, M., Smit, J. V., Smit, E., Struik-Kalkman, D., Tearno, C., Bezemer, M., van Niekerk, T., Pontesilli, O., Lowe, S. H., Oude Lashof, A. M. L., Posthouwer, D., Ackens, R. P., Schippers, J., Vergoossen, R., Weijenberg-Maes, B., van Loo, I. H. M., Havenith, T. R. A., Leyten, E. M. S., Gelinck, L. B. S., van Hartingsveld, A., Meerkerk, C., Wildenbeest, G. S., Mutsaers, J. A. E. M., Jansen, C. L., Mulder, J. W., Vrouenraets, S. M. E., Lauw, F. N., van Broekhuizen, M. C., Paap, H., Vlasblom, D. J., Smits, P. H. M., Weijer, S., El Moussaoui, R., Bosma, A. S., van Vonderen, M. G. A., van Houte, D. P. F., Kampschreur, L. M., Dijkstra, K., Faber, S., Weel, J., Kootstra, G. J., Delsing, C. E., van der Burg-Van de Plas, M., Heins, H., Lucas, E., Kortmann, W., van Twillert, G., Cohen Stuart, J. W. T., Diederen, B. M. W., van Truijen-Oud, F. A., van der Reijden, W. A., Jansen, R., Brinkman, K., van den Berk, G. E. L., Blok, W. L., Frissen, P. H. J., Lettinga, K. D., Schouten, W. E. M., Veenstra, J., Brouwer, J. C., Geerders, F. G., Hoeksema, K., Kleene, J. M., van der Meche, B. I., Spelbrink, M., Sulman, H., Toonen, A. J. M., Wijnands, S., Kwa, D., Witte, E., Koopmans, P. P., Keuter, M., van der Ven, A. J. A. M., ter Hofstede, H. J. M., Dofferhoff, A. S. M., van Crevel, R., Albers, M., Bosch, M. E. W., Grintjes-Huisman, K. J. T., Zomer, J. B., Stelma, F. F., Rahamat-Langendoen, J., Burger, D., Richter, C., Gisolf, H. E., Hassing, J. R., ter Beest, G., van Bentum, P. H. M., Langebeek, N., Tiemessen, R., Swanink, C. M. A., van Lelyveld, S. F. L., Soetekouw, R., Hulshoff, N., van der Prijt, L. M. M., van der Swaluw, J., Bermon, N., Herpers, B. L., Veenendaal, D., Verhagen, W. D. M., van Wijk, M., van Kasteren, M. E. E., Brouwer, E. A., de Kruijf-Van de Wiel, B. A. F. M., Kuipers, M., Santegoets, R. M. W. J., van der Ven, B., Marcelis, H. J., Buiting, A. G. M., Kabel, J. P., Bierman, W. F. W., Scholvinck, H., Wilting, R. 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N., Van Beek J.E.A., Vriesde M., Van Zonneveld L.M., De Oude-Lubbers A., Van Den Berg-Cameron H.J., Bruinsma-Broekman F.B., de Groot J., De Zeeuw-De Man M., Boucher C.A.B., Koopmans M.P.G., van Kampen J.J.A., Pas S.D., Driessen G.J.A., van Rossum A.M.C., Van Der Knaap L.C., Visser E., Branger J., Rijkeboer-Mes A., Duijf-Van De Ven C.J.H.M., Schippers E.F., van Nieuwkoop C., van IJperen J.M., Geilings J., van der Hut G., Franck P.F.H., Van Eeden A., Brokking W., Groot M., Elsenburg L.J.M., Damen M., Kwa I.S., Groeneveld P.H.P., Bouwhuis J.W., Van Den Berg J.F., Van Hulzen A.G.W., Van Der Bliek G.L., Bor P.C.J., Bloembergen P., Wolfhagen M.J.H.M., Ruijs G.J.H.M., Kroon F.P., De Boer M.G.J., Bauer M.P., Jolink H., Vollaard A.M., Dorama W., Van Holten N., Claas E.C.J., Wessels E., Den Hollander J.G., Pogany K., Roukens A., Kastelijns M., Smit J.V., Smit E., Struik-Kalkman D., Tearno C., Bezemer M., van Niekerk T., Pontesilli O., Lowe S.H., Oude Lashof A.M.L., Posthouwer D., Ackens R.P., 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E.J.G., van Agtmael A.M., Bomers M., de Vocht J., Heitmuller M., Laan M.L., Pettersson M.A., Vandenbroucke-Grauls C.M.J.E., Ang W.C., Geelen S.P.M., Wolfs T.F.W., Bont J.L., Nauta N., Bezemer O.D., van Sighem I.A., Boender S.T., de Jong A., Bergsma D., Hoekstra P., de Lang A., Grivell S., Jansen A., Rademaker J.M., Raethke M., Meijering R., Schnorr S., de Groot L., van den Akker M., Bakker Y., Claessen E., El Berkaoui A., Koops J., Kruijne E., Lodewijk C., Munjishvili L., Peeck B., Ree C., Regtop R., Ruijs Y., Rutkens T., van de Sande L., Schoorl M., Timmerman A., Tuijn E., Veenenberg L., van der Vliet S., Wisse A., Woudstra T., Tuk B., Dupon M., Gaborieau V., Lacoste D., Malvy D., Mercie P., Neau D., Pellegrin L.J., Tchamgoue S., Lazaro E., Cazanave C., Vandenhende M., Vareil O.M., Gerard Y., Blanco P., Bouchet S., Breilh D., Fleury H., Pellegrin I., Chene G., Thiebaut R., Wittkop L., Lawson-Ayayi S., Gimbert A., Desjardin S., Lacaze-Buzy L., Petrov-Sanchez V., Andre N., Bernard K., 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E.P., Piano P., Cacopardo B., Celesia B., Vecchiet J., Falasca K., Pan A., Lorenzotti S., Sighinolfi L., Segala D., Vichi F., Cassola G., Viscoli C., Alessandrini A., Bobbio N., Mazzarello G., Mastroianni C., Belvisi V., Caramma I., Chiodera A., Milini P., Rizzardini G., Moioli C.M., Piolini R., Ridolfo L.A., Salpietro S., Tincati C., Puzzolante C., Abrescia N., Chirianni A., Borgia G., Orlando R., Bonadies G., Di Martino F., Gentile I., Maddaloni L., Cattelan M.A., Marinello S., Cascio A., Colomba C., Baldelli F., Schiaroli E., Parruti G., Sozio F., Magnani G., Ursitti A.M., Cristaudo A., Baldin G., Capozzi M., Cicalini S., Fontanelli Sulekova L., Iaiani G., Latini A., Mastrorosa I., Savinelli S., Vergori A., Cecchetto M., Viviani F., Bagella P., Rossetti B., Franco A., Fontana Del Vecchio R., Francisci D., Di Giuli C., Caramello P., Orofino C.G., Sciandra M., Bassetti M., Londero A., Pellizzer G., Manfrin V., Starnini G., Ialungo A., Dellamonica P., Bernard E., Courjon J., Cua E., De 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C, Sciandra, M, Bassetti, M, Londero, A, Pellizzer, G, Manfrin, V, Starnini, G, Ialungo, A, Dellamonica, P, Bernard, E, Courjon, J, Cua, E, De Salvador-Guillouet, F, Durant, J, Etienne, C, Ferrando, S, Mondain-Miton, V, Naqvi, A, Perbost, I, Pillet, S, Prouvost-Keller, B, Pugliese, P, Rio, V, Risso, K, Roger, M, Aubert, V, Bernasconi, E, Ciuffi, A, Dollenmaier, G, Egger, M, Elzi, L, Fehr, J, Fellay, J, Gunthard, F, Haerry, D, Hasse, B, Hirsch, H, Hoffmann, M, Hosli, I, Kahlert, C, Kaiser, L, Keiser, O, Klimkait, T, Kouyos, D, Kovari, H, Ledergerber, B, Martinetti, G, Martinez de Tejada, B, Marzolini, C, Metzner, J, Muller, N, Nicca, D, Pantaleo, G, Paioni, P, Rauch, A, Rudin, C, Speck, R, Stockle, M, Tarr, P, Trkola, A, Vernazza, P, Wandeler, G, Yerly, S, Internal medicine, Pediatric surgery, Medical Microbiology and Infection Prevention, Amsterdam Gastroenterology Endocrinology Metabolism, Faculteit Medische Wetenschappen/UMCG, Microbes in Health and Disease (MHD), and Molecular Pharmacology
Subjects: Male, HIV AIDS, HIV Infections, 0302 clinical medicine, Interquartile range, Risk Factors, Neoplasms, Medicine, 030212 general & internal medicine, Prospective Studies, Prospective cohort study, 0303 health sciences, Incidence, Absolute risk reduction, Drugs, General Medicine, Middle Aged, Viral Load, Antiretroviral therapy, 3. Good health, AIDS, Cancer treatment, Prevention policy and public health, Cohort, Infectious diseases, Cohort studies, Female, Viral load, Adult, medicine.medical_specialty, Anti-HIV Agents, HIV Infections/drug therapy, Socio-culturale, Time-to-Treatment, 03 medical and health sciences, Acquired immunodeficiency syndrome (AIDS), SDG 3 - Good Health and Well-being, Internal medicine, Internal Medicine, Humans, Adverse effect, 030306 microbiology, business.industry, HIV, Cancer, medicine.disease, CD4 Lymphocyte Count, Anti-HIV Agents/therapeutic use, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie, business, Neoplasms/epidemiology
Abstract: BACKGROUND: Immediate initiation of antiretroviral therapy (ART) regardless of CD4 cell count reduces risk for AIDS and non-AIDS-related events in asymptomatic, HIV-positive persons and is the standard of care. However, most HIV-positive persons initiate ART when their CD4 count decreases below 500 × 10 9 cells/L. Consequences of delayed ART on risk for non-AIDS-defining and AIDS-defining cancer, one of the most common reasons for death in HIV, are unclear. OBJECTIVE: To estimate the long-term risk difference for cancer with the immediate ART strategy.DESIGN: Multinational prospective cohort study.SETTING: The D:A:D (Data collection on Adverse events of anti-HIV Drugs) study, which included HIV-positive persons from Europe, Australia, and the United States.PARTICIPANTS: 8318 HIV-positive persons with at least 1 measurement each of CD4 cell count and viral load while ART-naive (study period, 2006 to 2016).MEASUREMENTS: The parametric g-formula was used, with adjustment for baseline and time-dependent confounders (CD4 cell count and viral load), to assess the 10-year risk for non-AIDS-defining and AIDS-defining cancer of immediate versus deferred (at CD4 counts RESULTS: During 64 021 person-years of follow-up, 231 cases of non-AIDS-defining cancer and 272 of AIDS-defining cancer occurred among HIV-positive persons with a median age of 36 years (interquartile range, 29 to 43 years). With immediate ART, the 10-year risk for non-AIDS-defining cancer was 2.97% (95% CI, 2.37% to 3.50%) and that for AIDS-defining cancer was 2.50% (CI, 2.37% to 3.38%). Compared with immediate ART initiation, the 10-year absolute risk differences when deferring ART to CD4 counts less than 500 × 10 9 cells/L and less than 350 × 10 9 cells/L were 0.12 percentage point (CI, -0.01 to 0.26 percentage point) and 0.29 percentage point (CI, -0.03 to 0.73 percentage point), respectively, for non-AIDS-defining cancer and 0.32 percentage point (CI, 0.21 to 0.44 percentage point) and 1.00 percentage point (CI, 0.67 to 1.44 percentage points), respectively, for AIDS-defining cancer. LIMITATION: Potential residual confounding due to observational study design.CONCLUSION: In this young cohort, effects of immediate ART on 10-year risk for cancer were small, and further supportive data are needed for non-AIDS-defining cancer.PRIMARY FUNDING SOURCE: Highly Active Antiretroviral Therapy Oversight Committee.
Published: 2021

16. Editors’ Preface

Author: Currie, Christina, primary, Fransen, Bart, additional, Henderiks, Valentine, additional, Stroo, Cyriel, additional, and Vanwijnsberghe, Dominique, additional
Published: 2019
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17. Les copies de la Vierge à l’Enfant dans une église de Jan van Eyck et le rôle de la version dessinée du Grand Curtius

Author: Henderiks, Valentine, primary
Published: 2019
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18. Late Neogene nannofossil assemblages as tracers of ocean circulation and paleoproductivity over the NW Australian shelf

Author: Karatsolis, Boris-Theofanis, Henderiks, Jorijntje, Karatsolis, Boris-Theofanis, and Henderiks, Jorijntje
Abstract: Late Miocene to Pliocene sediments from the NW Australian shelf provide unique records of paleoclimatic variations under warmer-than-present conditions. During the period from 6–3.5 million years ago (Ma), the area was dominated by warm, tropical waters supplied by an intensified, uninterrupted Indonesian Throughflow and characterised by prevailing humid conditions and increased precipitation. Despite the available information regarding the general paleoclimatic conditions, little is known about the concurrent regional ocean circulation patterns and the relative intensity of seasonally flowing boundary currents, such as the Leeuwin Current. Recent investigations of sediments recovered from the shelf during International Ocean Discovery Program (IODP) Expedition 356, have produced a number of well-dated time-series that cover the late Neogene and can therefore assist with more detailed reconstructions. In this study, we investigate two astronomically-tuned calcareous nannofossil records from IODP Sites U1463 and U1464 that can help us trace and understand long-term changes in ocean circulation and seasonality, as well as their effect on nutrient replenishment in the upper photic zone. By looking into shifts in the dominant species within the nannofossil assemblage, and comparing them with paleotemperature gradients between the NW Australian shelf and the eastern Indian Ocean, we identify the main periods of change in stratification and nutrient availability that occurred over the continental shelf. Our results indicate a significant change in ecological and oceanographic regime that occurred across the Miocene to Pliocene boundary (5.4–5.2 Ma), which can be attributed to an increase in seasonality and an overall intensification of the upper water column mixing over the shelf. Major changes in the nannofossil assemblages that reflect broader-scale processes and evolutionary events, such as the extinction of Sphenolithus spp. (~3.54 Ma) and the termination of the late
Published: 2023
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19. Late Neogene nannofossil assemblages as tracers of ocean circulation and paleoproductivity over the NW Australian shelf

Author: Boris-Theofanis Karatsolis and Jorijntje Henderiks
Subjects: Global and Planetary Change, Stratigraphy, Paleontology
Abstract: Late Miocene to Pliocene sediments from the NW Australian shelf, drilled by the International Ocean Discovery Program (IODP) Expedition 356, provide unique records of paleoclimatic variations under warmer-than-present conditions. During the period from 6 to 3.5 Ma, the area was dominated by warm, tropical waters supplied by an intensified, uninterrupted Indonesian throughflow and was characterised by prevailing humid conditions, including increased precipitation and river runoff. Despite the available information regarding the general paleoclimatic conditions, little is known about the concurrent regional ocean circulation patterns and the relative strength of seasonally flowing boundary currents, such as the Leeuwin Current. In this study, we investigate two astronomically tuned calcareous nannofossil time series from IODP Sites U1463 and U1464 to track long-term changes in ocean circulation and water column stratification, which influences the availability of nutrients in the upper photic zone and is considered to be a primary control on the (paleo)productivity of marine phytoplankton. By documenting shifts in the dominant species within the nannofossil assemblages and comparing these to paleotemperature gradients between the NW Australian shelf and the eastern Indian Ocean, we identify a significant change in the ecological and oceanographic regime that occurred across the Miocene–Pliocene boundary (5.4–5.2 Ma), which can be attributed to an overall intensification of the upper water column mixing over the shelf. Significant changes in nannofossil abundance and species composition that reflect broader-scale processes and evolutionary events, such as the termination of the late Miocene to early Pliocene biogenic bloom in the eastern Indian Ocean (4.6–4.4 Ma) and the extinction of Sphenolithus spp. (∼3.54 Ma), occurred long after this regional regime shift.
Published: 2023

20. Albrecht Bouts in Sibiu

Author: Henderiks, Valentine, primary
Published: 2018
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21. Consistently dated Atlantic sediment cores over the last 40 thousand years

Author: Waelbroeck, Claire, Lougheed, Bryan C., Vazquez Riveiros, Natalia, Missiaen, Lise, Pedro, Joel, Dokken, Trond, Hajdas, Irka, Wacker, Lukas, Abbott, Peter, Dumoulin, Jean-Pascal, Thil, François, Eynaud, Frédérique, Rossignol, Linda, Fersi, Wiem, Albuquerque, Ana Luiza, Arz, Helge, Austin, William E. N., Came, Rosemarie, Carlson, Anders E., Collins, James A., Dennielou, Bernard, Desprat, Stéphanie, Dickson, Alex, Elliot, Mary, Farmer, Christa, Giraudeau, Jacques, Gottschalk, Julia, Henderiks, Jorijntje, Hughen, Konrad, Jung, Simon, Knutz, Paul, Lebreiro, Susana, Lund, David C., Lynch-Stieglitz, Jean, Malaizé, Bruno, Marchitto, Thomas, Martínez-Méndez, Gema, Mollenhauer, Gesine, Naughton, Filipa, Nave, Silvia, Nürnberg, Dirk, Oppo, Delia, Peck, Victoria, Peeters, Frank J. C., Penaud, Aurélie, Portilho-Ramos, Rodrigo da Costa, Repschläger, Janne, Roberts, Jenny, Rühlemann, Carsten, Salgueiro, Emilia, Sanchez Goni, Maria Fernanda, Schönfeld, Joachim, Scussolini, Paolo, Skinner, Luke C., Skonieczny, Charlotte, Thornalley, David, Toucanne, Samuel, Rooij, David Van, Vidal, Laurence, Voelker, Antje H. L., Wary, Mélanie, Weldeab, Syee, and Ziegler, Martin
Published: 2019
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22. Absolute nannofossil abundance estimates: Quantifying the pros and cons of different techniques

Author: Bordiga, Manuela, Bartol, Miloš, and Henderiks, Jorijntje
Published: 2015
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23. Downsizing the pelagic carbonate factory: Impacts of calcareous nannoplankton evolution on carbonate burial over the past 17 million years

Author: Suchéras-Marx, Baptiste and Henderiks, Jorijntje
Published: 2014
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24. Microfossil evidence for trophic changes during the Eocene–Oligocene transition in the South Atlantic (ODP Site 1263, Walvis Ridge)

Author: M. Bordiga, J. Henderiks, F. Tori, S. Monechi, R. Fenero, A. Legarda-Lisarri, and E. Thomas
Subjects: Environmental pollution, TD172-193.5, Environmental protection, TD169-171.8, Environmental sciences, GE1-350
Abstract: The biotic response of calcareous nannoplankton to environmental and climatic changes during the Eocene–Oligocene transition was investigated at a high resolution at Ocean Drilling Program (ODP) Site 1263 (Walvis Ridge, southeast Atlantic Ocean) and compared with a lower-resolution benthic foraminiferal record. During this time interval, global climate, which had been warm under high levels of atmospheric CO2 (pCO2) during the Eocene, transitioned into the cooler climate of the Oligocene, at overall lower pCO2. At Site 1263, the absolute nannofossil abundance (coccoliths per gram of sediment; N g−1) and the mean coccolith size decreased distinctly after the E–O boundary (EOB; 33.89 Ma), mainly due to a sharp decline in abundance of large-sized Reticulofenestra and Dictyococcites, occurring within a time span of ~ 47 kyr. Carbonate dissolution did not vary much across the EOB; thus, the decrease in abundance and size of nannofossils may reflect an overall decrease in their export production, which could have led to variations in the food availability for benthic foraminifers. The benthic foraminiferal assemblage data are consistent with a global decline in abundance of rectilinear species with complex apertures in the latest Eocene (~ 34.5 Ma), potentially reflecting changes in the food source, i.e., phytoplankton. This was followed by a transient increased abundance of species indicative of seasonal delivery of food to the sea floor (Epistominella spp.; ~ 33.9–33.4 Ma), with a short peak in overall food delivery at the EOB (buliminid taxa; ~ 33.8 Ma). Increased abundance of Nuttallides umbonifera (at ~ 33.3 Ma) indicates the presence of more corrosive bottom waters and possibly the combined arrival of less food at the sea floor after the second step of cooling (Step 2). The most important changes in the calcareous nannofossil and benthic communities occurred ~ 120 kyr after the EOB. There was no major change in nannofossil abundance or assemblage composition at Site 1263 after Step 2 although benthic foraminifera indicate more corrosive bottom waters during this time. During the onset of latest-Eocene–earliest-Oligocene climate change, marine phytoplankton thus showed high sensitivity to fast-changing conditions as well as to a possibly enhanced, pulsed nutrient supply and to the crossing of a climatic threshold (e.g., pCO2 decline, high-latitude cooling and changes in ocean circulation).
Published: 2015
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25. Risk for non-AIDS-defining and AIDS-defining cancer of early versus delayed initiation of antiretroviral therapy: A multinational prospective cohort study

Author: Chammartin, F, Lodi, S, Logan, R, Ryom, L, Mocroft, A, Kirk, O, D'Arminio Monforte, A, Reiss, P, Phillips, A, El-Sadr, W, Hatleberg, C, Pradier, C, Bonnet, F, Law, M, De Wit, S, Sabin, C, Lundgren, J, Bucher, H, Calvo, G, Dabis, F, Morfeldt, L, Weber, R, Lind-Thomsen, A, Salbol Brandt, R, Hillebreght, M, Zaheri, S, Wit, F, Scherrer, A, Schoni-Affolter, F, Rickenbach, M, Tavelli, A, Fanti, I, Leleux, O, Mourali, J, Le Marec, F, Boerg, E, Thulin, E, Sundstrom, A, Bartsch, G, Thompsen, G, Necsoi, C, Delforge, M, Fontas, E, Caissotti, C, Dollet, K, Mateu, S, Torres, F, Petoumenos, K, Blance, A, Huang, R, Puhr, R, Gronborg Laut, K, Kristensen, D, Kamara, D, Smith, C, Raben, D, Matthews, C, Bojesen, A, Grevsen, A, Powderly, B, Shortman, N, Moecklinghoff, C, Reilly, G, Smit, C, Ross, M, Fux, C, Morlat, P, Friis-Moller, N, Kowalska, J, Bohlius, J, Bower, M, Fatkenheuer, G, Grulich, A, Sjol, A, Meidahl, P, Iversen, J, Hillebregt, M, Prins, J, Kuijpers, T, Scherpbier, H, Van Der Meer, J, Godfried, M, Van Der Poll, T, Nellen, F, Geerlings, S, Van Vugt, M, Pajkrt, D, Bos, J, Wiersinga, W, Van Der Valk, M, Goorhuis, A, Hovius, J, Van Eden, J, Henderiks, A, Van Hes, A, Mutschelknauss, M, Nobel, H, Pijnappel, F, Jurriaans, S, Back, N, Zaaijer, H, Berkhout, B, Cornelissen, M, Schinkel, C, Thomas, X, Van Den Berge, M, Stegeman, A, Baas, S, Hage De Looff, L, Versteeg, D, Pronk, M, Ammerlaan, H, de Munnik, E, Jansz, A, Tjhie, J, Wegdam, M, Deiman, B, Scharnhorst, V, Van Der Plas, A, Weijsenfeld, A, Van Der Ende, M, de Vries-Sluijs, T, van Gorp, E, Schurink, C, Nouwen, J, Verbon, A, Rijnders, B, Bax, H, Van Der Feltz, M, Bassant, N, Van Beek, J, Vriesde, M, Van Zonneveld, L, De Oude-Lubbers, A, Van Den Berg-Cameron, H, Bruinsma-Broekman, F, de Groot, J, De Zeeuw-De Man, M, Boucher, C, Koopmans, M, van Kampen, J, Pas, S, Driessen, G, van Rossum, A, Van Der Knaap, L, Visser, E, Branger, J, Rijkeboer-Mes, A, Duijf-Van De Ven, C, Schippers, E, van Nieuwkoop, C, van IJperen, J, Geilings, J, van der Hut, G, Franck, P, Van Eeden, A, Brokking, W, Groot, M, Elsenburg, L, Damen, M, Kwa, I, Groeneveld, P, Bouwhuis, J, Van Den Berg, J, Van Hulzen, A, Van Der Bliek, G, Bor, P, Bloembergen, P, Wolfhagen, M, Ruijs, G, Kroon, F, De Boer, M, Bauer, M, Jolink, H, Vollaard, A, Dorama, W, Van Holten, N, Claas, E, Wessels, E, Den Hollander, J, Pogany, K, Roukens, A, Kastelijns, M, Smit, J, Smit, E, Struik-Kalkman, D, Tearno, C, Bezemer, M, van Niekerk, T, Pontesilli, O, Lowe, S, Oude Lashof, A, Posthouwer, D, Ackens, R, Schippers, J, Vergoossen, R, Weijenberg-Maes, B, van Loo, I, Havenith, T, Leyten, E, Gelinck, L, van Hartingsveld, A, Meerkerk, C, Wildenbeest, G, Mutsaers, J, Jansen, C, Mulder, J, Vrouenraets, S, Lauw, F, van Broekhuizen, M, Paap, H, Vlasblom, D, Smits, P, Weijer, S, El Moussaoui, R, Bosma, A, van Vonderen, M, van Houte, D, Kampschreur, L, Dijkstra, K, Faber, S, Weel, J, Kootstra, G, Delsing, C, van der Burg-Van de Plas, M, Heins, H, Lucas, E, Kortmann, W, van Twillert, G, Cohen Stuart, J, Diederen, B, van Truijen-Oud, F, van der Reijden, W, Jansen, R, Brinkman, K, van den Berk, G, Blok, W, Frissen, P, Lettinga, K, Schouten, W, Veenstra, J, Brouwer, J, Geerders, F, Hoeksema, K, Kleene, J, van der Meche, B, Spelbrink, M, Sulman, H, Toonen, A, Wijnands, S, Kwa, D, Witte, E, Koopmans, P, Keuter, M, van der Ven, A, ter Hofstede, H, Dofferhoff, A, van Crevel, R, Albers, M, Bosch, M, Grintjes-Huisman, K, Zomer, J, Stelma, F, Rahamat-Langendoen, J, Burger, D, Richter, C, Gisolf, H, Hassing, J, ter Beest, G, van Bentum, P, Langebeek, N, Tiemessen, R, Swanink, C, van Lelyveld, S, Soetekouw, R, Hulshoff, N, van der Prijt, L, van der Swaluw, J, Bermon, N, Herpers, B, Veenendaal, D, Verhagen, W, van Wijk, M, van Kasteren, M, Brouwer, E, de Kruijf-Van de Wiel, B, Kuipers, M, Santegoets, R, van der Ven, B, Marcelis, H, Buiting, A, Kabel, J, Bierman, W, Scholvinck, H, Wilting, R, Stienstra, Y, de Groot-De Jonge, H, van der Meulen, A, de Weerd, A, Ludwig-Roukema, J, Niesters, H, Riezebos-Brilman, A, van Leer-Buter, C, Knoester, M, Hoepelman, A, Mudrikova, T, Ellerbroek, M, Oosterheert, J, Arends, E, Barth, E, Wassenberg, M, Schadd, M, van Elst-Laurijssen, D, van Oers-Hazelzet, B, Vervoort, S, van Berkel, M, Schuurman, R, Verduyn-Lunel, F, Wensing, A, Peters, E, van Agtmael, A, Bomers, M, de Vocht, J, Heitmuller, M, Laan, M, Pettersson, M, Vandenbroucke-Grauls, C, Ang, W, Geelen, S, Wolfs, T, Bont, J, Nauta, N, Bezemer, O, van Sighem, I, Boender, S, de Jong, A, Bergsma, D, Hoekstra, P, de Lang, A, Grivell, S, Jansen, A, Rademaker, J, Raethke, M, Meijering, R, Schnorr, S, de Groot, L, van den Akker, M, Bakker, Y, Claessen, E, El Berkaoui, A, Koops, J, Kruijne, E, Lodewijk, C, Munjishvili, L, Peeck, B, Ree, C, Regtop, R, Ruijs, Y, Rutkens, T, van de Sande, L, Schoorl, M, Timmerman, A, Tuijn, E, Veenenberg, L, van der Vliet, S, Wisse, A, Woudstra, T, Tuk, B, Dupon, M, Gaborieau, V, Lacoste, D, Malvy, D, Mercie, P, Neau, D, Pellegrin, L, Tchamgoue, S, Lazaro, E, Cazanave, C, Vandenhende, M, Vareil, O, Gerard, Y, Blanco, P, Bouchet, S, Breilh, D, Fleury, H, Pellegrin, I, Chene, G, Thiebaut, R, Wittkop, L, Lawson-Ayayi, S, Gimbert, A, Desjardin, S, Lacaze-Buzy, L, Petrov-Sanchez, V, Andre, N, Bernard, K, Caubet, O, Caunegre, L, Chossat, I, Courtault, C, Dauchy, A, Dondia, D, Duffau, P, Dutronc, H, Farbos, S, Faure, I, Ferrand, H, Greib, C, Hessamfar, M, Imbert, Y, Lataste, P, Marie, J, Mechain, M, Monlun, E, Ochoa, A, Pistone, T, Raymond, I, Receveur, C, Rispal, P, Sorin, L, Valette, C, Viallard, J, Wille, H, Wirth, G, Lafon, M, Trimoulet, P, Bellecave, P, Tumiotto, C, Haramburu, F, Miremeont-Salame, G, Blaizeau, J, Decoin, M, Hannapier, C, Lenaud, E, Pougetoux, A, Delveaux, S, D'Ivernois, C, Diarra, F, Uwamaliya-Nziyumvira, B, Palmer, G, Conte, V, Sapparrart, V, Moore, R, Edwards, S, Hoy, J, Watson, K, Roth, N, Lau, H, Bloch, M, Baker, D, Carr, A, Cooper, D, O'Sullivan, M, Nolan, D, Guelfi, G, Domingo, P, Sambeat, A, Gatell, J, Del Cacho, E, Cadafalch, J, Fuster, M, Codina, C, Sirera, G, Vaque, A, Clumeck, N, Gennotte, F, Gerard, M, Kabeya, K, Konopnicki, D, Libois, A, Martin, C, Payen, C, Semaille, P, Van Laethem, Y, Neaton, J, El-Sadr, M, Krum, E, Thompson, G, Wentworth, D, Luskin-Hawk, R, Telzak, E, Abrams, I, Cohn, D, Markowitz, N, Arduino, R, Mushatt, D, Friedland, G, Perez, G, Tedaldi, E, Fisher, E, Gordin, F, Crane, R, Sampson, J, Baxter, J, Gazzard, B, Horban, A, Karpov, I, Pedersen, C, Ristola, M, Rockstroh, J, Peters, L, Fischer, H, Larsen, F, Podlekareva, D, Cozzi-Lepri, A, Shepherd, L, Schultze, A, Amele, S, Losso, M, Kundro, M, Schmied, B, Zangerle, R, Vassilenko, A, Mitsura, M, Paduto, D, Florence, E, Vandekerckhove, L, Hadziosmanovic, V, Begovac, J, Machala, L, Jilich, D, Sedlacek, D, Kronborg, G, Benfield, T, Gerstoft, J, Katzenstein, T, Moller, F, Ostergaard, L, Wiese, L, Nielsen, N, Zilmer, K, Smidt, J, Aho, I, Viard, J, Girard, P, Duvivier, C, Schmidt, R, Degen, O, 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I., Pradier C., Bonnet F., Law M., De Wit S., Sabin C., Lundgren J. D., Bucher H. C., Calvo G., Dabis F., Morfeldt L., Weber R., Lind-Thomsen A., Salbol Brandt R., Hillebreght M., Zaheri S., Wit F. W. N. M., Scherrer A., Schoni-Affolter F., Rickenbach M., Tavelli A., Fanti I., Leleux O., Mourali J., Le Marec F., Boerg E., Thulin E., Sundstrom A., Bartsch G., Thompsen G., Necsoi C., Delforge M., Fontas E., Caissotti C., Dollet K., Mateu S., Torres F., Petoumenos K., Blance A., Huang R., Puhr R., Gronborg Laut K., Kristensen D., Kamara D. A., Smith C. J., Raben D., Matthews C., Bojesen A., Grevsen A. L., Powderly B., Shortman N., Moecklinghoff C., Reilly G., Smit C., Ross M., Fux C. A., Morlat P., Friis-Moller N., Kowalska J., Bohlius J., Bower M., Fatkenheuer G., Grulich A., Sjol A., Meidahl P., Iversen J. S., Hillebregt M., Prins J. M., Kuijpers T. W., Scherpbier H. J., Van Der Meer J. T. M., Godfried M. H., Van Der Poll T., Nellen F. J. B., Geerlings S. 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M., Cristaudo A., Baldin G., Capozzi M., Cicalini S., Fontanelli Sulekova L., Iaiani G., Latini A., Mastrorosa I., Savinelli S., Vergori A., Cecchetto M., Viviani F., Bagella P., Rossetti B., Franco A., Fontana Del Vecchio R., Francisci D., Di Giuli C., Caramello P., Orofino C. G., Sciandra M., Bassetti M., Londero A., Pellizzer G., Manfrin V., Starnini G., Ialungo A., Dellamonica P., Bernard E., Courjon J., Cua E., De Salvador-Guillouet F., Durant J., Etienne C., Ferrando S., Mondain-Miton V., Naqvi A., Perbost I., Pillet S., Prouvost-Keller B., Pugliese P., Rio V., Risso K., Roger M. P., Aubert V., Bernasconi E., Ciuffi A., Dollenmaier G., Egger M., Elzi L., Fehr J., Fellay J., Gunthard F. H., Haerry D., Hasse B., Hirsch H. H., Hoffmann M., Hosli I., Kahlert C., Kaiser L., Keiser O., Klimkait T., Kouyos D. R., Kovari H., Ledergerber B., Martinetti G., Martinez de Tejada B., Marzolini C., Metzner J. K., Muller N., Nicca D., Pantaleo G., Paioni P., Rauch A., Rudin C., Speck R., Stockle M., Tarr P., Trkola A., Vernazza P., Wandeler G., and Yerly S.
Abstract: Background: Immediate initiation of antiretroviral therapy (ART) regardless of CD4 cell count reduces risk for AIDS and non-AIDS-related events in asymptomatic, HIV-positive persons and is the standard of care. However, most HIV-positive persons initiate ART when their CD4 count decreases below 500 × 109 cells/L. Consequences of delayed ART on risk for non-AIDS-defining and AIDS-defining cancer, one of the most common reasons for death in HIV, are unclear. Objective: To estimate the long-term risk difference for cancer with the immediate ART strategy. Design: Multinational prospective cohort study. Setting: The D:A:D (Data collection on Adverse events of anti-HIV Drugs) study, which included HIV-positive persons from Europe, Australia, and the United States. Participants: 8318 HIV-positive persons with at least 1 measurement each of CD4 cell count and viral load while ART-naive (study period, 2006 to 2016). Measurements: The parametric g-formula was used, with adjustment for baseline and time-dependent confounders (CD4 cell count and viral load), to assess the 10-year risk for non-AIDS-defining and AIDS-defining cancer of immediate versus deferred (at CD4 counts < 350 and < 500 × 109 cells/L) ART initiation strategies. Results: During 64 021 person-years of follow-up, 231 cases of non-AIDS-defining cancer and 272 of AIDS-defining cancer occurred among HIV-positive persons with a median age of 36 years (interquartile range, 29 to 43 years). With immediate ART, the 10-year risk for non-AIDS-defining cancer was 2.97% (95% CI, 2.37% to 3.50%) and that for AIDS-defining cancer was 2.50% (CI, 2.37% to 3.38%). Compared with immediate ART initiation, the 10-year absolute risk differences when deferring ART to CD4 counts less than 500 × 109 cells/L and less than 350 × 109 cells/L were 0.12 percentage point (CI, -0.01 to 0.26 percentage point) and 0.29 percentage point (CI, -0.03 to 0.73 percentage point), respectively, for non-AIDS-defining cancer and 0.32 percentage p
Published: 2021

26. Site U1460

Author: Gallagher, S.J., primary, Fulthorpe, C.S., additional, Bogus, K., additional, Auer, G., additional, Baranwal, S., additional, Castañeda, I.S., additional, Christensen, B.A., additional, De Vleeschouwer, D., additional, Franco, D.R., additional, Groeneveld, J., additional, Gurnis, M., additional, Haller, C., additional, He, Y., additional, Henderiks, J., additional, Himmler, T., additional, Ishiwa, T., additional, Iwatani, H., additional, Jatiningrum, R.S., additional, Kominz, M.A., additional, Korpanty, C.A., additional, Lee, E.Y., additional, Levin, E., additional, Mamo, B.L., additional, McGregor, H.V., additional, McHugh, C.M., additional, Petrick, B.F., additional, Potts, D.C., additional, Rastegar Lari, A., additional, Renema, W., additional, Reuning, L., additional, Takayanagi, H., additional, and Zhang, W., additional
Published: 2017
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27. Expedition 356 methods

Author: Gallagher, S.J., primary, Fulthorpe, C.S., additional, Bogus, K., additional, Auer, G., additional, Baranwal, S., additional, Castañeda, I.S., additional, Christensen, B.A., additional, De Vleeschouwer, D., additional, Franco, D.R., additional, Groeneveld, J., additional, Gurnis, M., additional, Haller, C., additional, He, Y., additional, Henderiks, J., additional, Himmler, T., additional, Ishiwa, T., additional, Iwatani, H., additional, Jatiningrum, R.S., additional, Kominz, M.A., additional, Korpanty, C.A., additional, Lee, E.Y., additional, Levin, E., additional, Mamo, B.L., additional, McGregor, H.V., additional, McHugh, C.M., additional, Petrick, B.F., additional, Potts, D.C., additional, Rastegar Lari, A., additional, Renema, W., additional, Reuning, L., additional, Takayanagi, H., additional, and Zhang, W., additional
Published: 2017
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28. Expedition 356 summary

Author: Gallagher, S.J., primary, Fulthorpe, C.S., additional, Bogus, K., additional, Auer, G., additional, Baranwal, S., additional, Castañeda, I.S., additional, Christensen, B.A., additional, De Vleeschouwer, D., additional, Franco, D.R., additional, Groeneveld, J., additional, Gurnis, M., additional, Haller, C., additional, He, Y., additional, Henderiks, J., additional, Himmler, T., additional, Ishiwa, T., additional, Iwatani, H., additional, Jatiningrum, R.S., additional, Kominz, M.A., additional, Korpanty, C.A., additional, Lee, E.Y., additional, Levin, E., additional, Mamo, B.L., additional, McGregor, H.V., additional, McHugh, C.M., additional, Petrick, B.F., additional, Potts, D.C., additional, Rastegar Lari, A., additional, Renema, W., additional, Reuning, L., additional, Takayanagi, H., additional, and Zhang, W., additional
Published: 2017
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29. Late Neogene nannofossil assemblages as tracers of ocean circulation and paleoproductivity over the NW Australian shelf

Author: Karatsolis, Boris-Theofanis and Henderiks, Jorijntje
Subjects: Climate Research, Geosciences, Multidisciplinary, Multidisciplinär geovetenskap, Klimatforskning
Abstract: Late Miocene to Pliocene sediments from the NW Australian shelf provide unique records of paleoclimatic variations under warmer-than-present conditions. During the period from 6–3.5 million years ago (Ma), the area was dominated by warm, tropical waters supplied by an intensified, uninterrupted Indonesian Throughflow and characterised by prevailing humid conditions and increased precipitation. Despite the available information regarding the general paleoclimatic conditions, little is known about the concurrent regional ocean circulation patterns and the relative intensity of seasonally flowing boundary currents, such as the Leeuwin Current. Recent investigations of sediments recovered from the shelf during International Ocean Discovery Program (IODP) Expedition 356, have produced a number of well-dated time-series that cover the late Neogene and can therefore assist with more detailed reconstructions. In this study, we investigate two astronomically-tuned calcareous nannofossil records from IODP Sites U1463 and U1464 that can help us trace and understand long-term changes in ocean circulation and seasonality, as well as their effect on nutrient replenishment in the upper photic zone. By looking into shifts in the dominant species within the nannofossil assemblage, and comparing them with paleotemperature gradients between the NW Australian shelf and the eastern Indian Ocean, we identify the main periods of change in stratification and nutrient availability that occurred over the continental shelf. Our results indicate a significant change in ecological and oceanographic regime that occurred across the Miocene to Pliocene boundary (5.4–5.2 Ma), which can be attributed to an increase in seasonality and an overall intensification of the upper water column mixing over the shelf. Major changes in the nannofossil assemblages that reflect broader-scale processes and evolutionary events, such as the extinction of Sphenolithus spp. (~3.54 Ma) and the termination of the late Miocene to early Pliocene biogenic bloom in the eastern Indian Ocean (4.6–4.4 Ma), occurred long after this regional regime shift.
Published: 2022

30. High temperature decreases the PIC / POC ratio and increases phosphorus requirements in Coccolithus pelagicus (Haptophyta)

Author: A. C. Gerecht, L. Šupraha, B. Edvardsen, I. Probert, and J. Henderiks
Subjects: Ecology, QH540-549.5, Life, QH501-531, Geology, QE1-996.5
Abstract: Rising ocean temperatures will likely increase stratification of the water column and reduce nutrient input into the photic zone. This will increase the likelihood of nutrient limitation in marine microalgae, leading to changes in the abundance and composition of phytoplankton communities, which in turn will affect global biogeochemical cycles. Calcifying algae, such as coccolithophores, influence the carbon cycle by fixing CO2 into particulate organic carbon through photosynthesis (POC production) and into particulate inorganic carbon through calcification (PIC production). As calcification produces a net release of CO2, the ratio of PIC to POC production determines whether coccolithophores act as a source (high PIC / POC) or a sink (low PIC / POC) of atmospheric CO2. We studied the effect of phosphorus (P-) limitation and high temperature on the physiology and the PIC / POC ratio of two subspecies of Coccolithus pelagicus. This large and heavily calcified species is a major contributor to calcite export from the photic zone into deep-sea reservoirs. Phosphorus limitation did not influence exponential growth rates in either subspecies, but P-limited cells had significantly lower cellular P-content. One of the subspecies was subjected to a 5 °C temperature increase from 10 °C to 15 °C, which did not affect exponential growth rates either, but nearly doubled cellular P-content under both high and low phosphate availability. This temperature increase reduced the PIC / POC ratio by 40–60%, whereas the PIC / POC ratio did not differ between P-limited and nutrient-replete cultures when the subspecies were grown near their respective isolation temperature. Both P-limitation and elevated temperature significantly increased coccolith malformations. Our results suggest that a temperature increase may intensify P-limitation due to a higher P-requirement to maintain growth and POC production rates, possibly reducing abundances in a warmer ocean. Under such a scenario C. pelagicus may decrease its calcification rate relative to photosynthesis, thus favouring CO2 sequestration over release. It seems unlikely that P-limitation by itself causes changes in the PIC / POC ratio in this species.
Published: 2014
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31. Late Neogene nannofossil assemblages as tracers of ocean circulation and paleoproductivity over the NW Australian shelf

Author: Karatsolis, Boris Theofanis, primary and Henderiks, Jorijntje, additional
Published: 2022
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32. Evolutionary Rates in the Haptophyta: Exploring Molecular and Phenotypic Diversity

Author: Henderiks, Jorijntje, primary, Sturm, Daniela, additional, Šupraha, Luka, additional, and Langer, Gerald, additional
Published: 2022
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33. Global shifts in Noelaerhabdaceae assemblages during the late Oligocene–early Miocene

Author: Plancq, Julien, Mattioli, Emanuela, Henderiks, Jorijntje, and Grossi, Vincent
Published: 2013
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34. Fossil imprints from oceans of the past

Author: Jorijntje Henderiks
Subjects: Multidisciplinary, Fossils, Oceans and Seas, Phytoplankton, Global Warming
Abstract: Marine phytoplankton show notable resilience during extreme ocean states
Published: 2022

35. Van Eyck Studies : Papers Presented at the Eighteenth Symposium for the Study of Underdrawing and Technology in Painting, Brussels, 19-21 September 2012

Author: Currie, Christina, Fransen, Bart, Henderiks, Valentine, Stroo, Cyriel, Vanwijnsberghe, Dominique, Currie, Christina, Fransen, Bart, Henderiks, Valentine, Stroo, Cyriel, and Vanwijnsberghe, Dominique
Published: 2019
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36. PHENOTYPIC EVOLUTION STUDIED BY LAYERED STOCHASTIC DIFFERENTIAL EQUATIONS

Author: Reitan, Trond, Schweder, Tore, and Henderiks, Jorijntje
Published: 2012
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37. Late Neogene nannofossil assemblages as tracers of ocean circulation and paleoproductivity over the NW Australian shelf

Author: Karatsolis, Boris Theofanis, Henderiks, Jorijntje, Karatsolis, Boris Theofanis, and Henderiks, Jorijntje
Abstract: Late Miocene to Pliocene sediments from the NW Australian shelf provide unique records of paleoclimatic variations under warmer-than-present conditions. During the period from 6–3.5 million years ago (Ma), the area was dominated by warm, tropical waters supplied by an intensified, uninterrupted Indonesian Throughflow and characterised by prevailing humid conditions and increased precipitation. Despite the available information regarding the general paleoclimatic conditions, little is known about the concurrent regional ocean circulation patterns and the relative intensity of seasonally flowing boundary currents, such as the Leeuwin Current. Recent investigations of sediments recovered from the shelf during International Ocean Discovery Program (IODP) Expedition 356, have produced a number of well-dated time-series that cover the late Neogene and can therefore assist with more detailed reconstructions. In this study, we investigate two astronomically-tuned calcareous nannofossil records from IODP Sites U1463 and U1464 that can help us trace and understand long-term changes in ocean circulation and seasonality, as well as their effect on nutrient replenishment in the upper photic zone. By looking into shifts in the dominant species within the nannofossil assemblage, and comparing them with paleotemperature gradients between the NW Australian shelf and the eastern Indian Ocean, we identify the main periods of change in stratification and nutrient availability that occurred over the continental shelf. Our results indicate a significant change in ecological and oceanographic regime that occurred across the Miocene to Pliocene boundary (5.4–5.2 Ma), which can be attributed to an increase in seasonality and an overall intensification of the upper water column mixing over the shelf. Major changes in the nannofossil assemblages that reflect broader-scale processes and evolutionary events, such as the extinction of Sphenolithus spp. (~3.54 Ma) and the termination of the late
Published: 2022
Full Text: View/download PDF

38. Evolutionary Rates in the Haptophyta : Exploring Molecular and Phenotypic Diversity

Author: Henderiks, Jorijntje, Sturm, Daniela, Supraha, Luka, Langer, Gerald, Henderiks, Jorijntje, Sturm, Daniela, Supraha, Luka, and Langer, Gerald
Abstract: Haptophytes are photosynthetic protists found in both freshwater and marine environments with an origin possibly dating back to the Neoproterozoic era. The most recent molecular phylogeny reveals several haptophyte "mystery clades" that await morphological verification, but it is otherwise highly consistent with morphology-based phylogenies, including that of the coccolithophores (calcifying haptophytes). The fossil coccolith record offers unique insights into extinct lineages, including the adaptive radiations that produced extant descendant species. By combining molecular data of extant coccolithophores and phenotype-based studies of their ancestral lineages, it has become possible to probe the modes and rates of speciation in more detail, although this approach is still limited to only few taxa because of the lack of whole-genome datasets. The evolution of calcification likely involved several steps, but its origin can be traced back to an early association with organic scales typical for all haptophytes. Other key haptophyte traits, including the haplo-diplontic life cycle, are herein mapped upon the coccolithophorid phylogeny to help navigate a discussion of their ecological benefits and trade-offs in a rapidly changing ocean.
Published: 2022
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39. Fossil imprints from oceans of the past

Author: Henderiks, Jorijntje and Henderiks, Jorijntje
Published: 2022
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40. Abrupt conclusion of the late Miocene-early Pliocene biogenic bloom at 4.6-4.4 Ma

Author: Karatsolis, Boris-Theofanis, Lougheed, Bryan C., De Vleeschouwer, D., Henderiks, Jorijntje, Karatsolis, Boris-Theofanis, Lougheed, Bryan C., De Vleeschouwer, D., and Henderiks, Jorijntje
Abstract: The late Miocene-early Pliocene biogenic bloom was an extended time interval characterised by elevated ocean export productivity at numerous locations. As primary productivity is nutrient-limited at low-to-mid latitudes, this bloom has been attributed to an increase or a redistribution of available nutrients, potentially involving ocean-gateway or monsoon-related mechanisms. While the exact causal feedbacks remain debated, there is even less consensus on what caused the end of the biogenic bloom. Here, we compile Mio-Pliocene paleoproductivity proxy data from all major ocean basins to evaluate the timing and pacing of this termination. This systematic analysis reveals an abrupt and sustained reduction in low-latitude ocean productivity at 4.6–4.4 Ma. The decline in productivity coincided with a prolonged period of low orbital eccentricity and a shift towards lower-amplitude obliquity, an astronomical configuration linked to reduced East Asian Monsoon intensity and decreased riverine nutrient supply.
Published: 2022
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41. Les Quellinus :une dynastie de sculpteurs dans l’Europe du XVIIe siècle

Author: Martens, Didier, Patigny, Géraldine, Couvreur, Manuel, Henderiks, Valentine, Vander Auwera, Joost, Scholten, Frits FS, Frère, Wendy, Martens, Didier, Patigny, Géraldine, Couvreur, Manuel, Henderiks, Valentine, Vander Auwera, Joost, Scholten, Frits FS, and Frère, Wendy
Abstract: Le clan Quellinus est une famille d’artistes comptant dans ses rangs sculpteurs, peintres et graveurs. Cette étude se concentre exclusivement sur cinq sculpteurs de la dynastie, à savoir Erasmus l’Ancien, Artus l’Ancien, Artus le Jeune, Arnold et Thomas, et sur leurs ateliers à Anvers, à Amsterdam, à Copenhague et à Londres. Cette thèse s’inscrit dans une longue tradition de recherche consacrée à une dynastie d’artistes. Le fait d’étudier un clan plutôt qu’un artiste isolé constitue une démarche de plus en plus favorisée depuis quelques années, quand il s’agit d’améliorer la compréhension de la cohésion d’un groupe et d’évaluer l’importance des liens familiaux dans la création artistique. Ce travail a également pour objet, d’une part, de reconstituer le réseau européen de la dynastie Quellinus, d’autre part, de comprendre la manière dont les membres de la famille se sont transmis un bagage artistique solide d’une génération à l’autre. La thèse se compose de trois grands chapitres. Elle débute avec l’établissement des Quellinus à Anvers et la situation artistique d’Erasmus l’Ancien dans la cité scaldienne au début du XVIIe siècle. Cependant, rapidement, elle se tourne vers la figure de proue :Artus Quellinus l’Ancien. Bien que ce dernier ne soit pas le premier sculpteur Quellinus à s’établir à Anvers et à fonder un atelier familial, il est celui qui va asseoir la réputation artistique de cet atelier et qui va le rendre financièrement attractif, par l’obtention d’un flux important de commandes. Par ailleurs, Artus l’Ancien aspire rapidement à conquérir une nouvelle clientèle et à étendre son influence artistique au-delà des frontières des Pays-Bas méridionaux et de la Principauté de Liège. L’aplomb avec lequel il gère ses affaires constitue la ligne de conduite adoptée par les autres membres sculpteurs de la famille, qui recherchent également une renommée européenne. Ce premier chapitre permet, d’une part, de fixer l’importance des Quellinus dans les Pays-Bas méridion, Doctorat en Histoire, histoire de l'art et archéologie, info:eu-repo/semantics/nonPublished
Published: 2022

42. Reconstructing calcification in ancient coccolithophores: Individual coccolith weight and morphology of Coccolithus pelagicus (sensu lato)

Author: Cubillos, Joana C., Henderiks, Jorijntje, Beaufort, Luc, Howard, William R., and Hallegraeff, Gustaaf M.
Published: 2012
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43. Environmental controls on Emiliania huxleyi morphotypes in the Benguela coastal upwelling system (SE Atlantic)

Author: Henderiks, Jorijntje, Winter, Amos, Elbrächter, Malte, Feistel, Rainer, van der Plas, Anja, Nausch, Guenther, and Barlow, Ray
Published: 2012

44. Global coccolith size variability in Holocene deep-sea sediments

Author: Herrmann, Sandra, Weller, Andrew F., Henderiks, Jorijntje, and Thierstein, Hans R.
Published: 2012
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45. Fossil imprints from oceans of the past

Author: Henderiks, Jorijntje, primary
Published: 2022
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46. L’anonymat dans la peinture flamande du xve siècle

Author: Henderiks, Valentine, primary
Published: 2016
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47. Haptophyta

Author: Eikrem, Wenche, primary, Medlin, Linda K., additional, Henderiks, Jorijntje, additional, Rokitta, Sebastian, additional, Rost, Björn, additional, Probert, Ian, additional, Throndsen, Jahn, additional, and Edvardsen, Bente, additional
Published: 2016
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48. The Role of Carbon Dioxide During the Onset of Antarctic Glaciation

Author: Pagani, Mark, Huber, Matthew, Liu, Zhonghui, Bohaty, Steven M., Henderiks, Jorijntje, Sijp, Willem, Krishnan, Srinath, and DeConto, Robert M.
Published: 2011
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49. Refining the alkenone-pCO2 method II: Towards resolving the physiological parameter ‘b’

Author: Jorijntje Henderiks, Yi Ge Zhang, and Xiaoqing Liu
Subjects: Alkenone, 010504 meteorology & atmospheric sciences, Membrane permeability, biology, Mineralogy, 010502 geochemistry & geophysics, biology.organism_classification, 01 natural sciences, Haptophyte, Ice-sheet model, Ice core, Geochemistry and Petrology, Isotopes of carbon, Phytoplankton, Environmental science, Growth rate, 0105 earth and related environmental sciences
Abstract: Haptophyte algal biomarkers called alkenones are widely used to reconstruct atmospheric CO2 in Earth’s Cenozoic history. This method is based on the notion that the algal carbon isotope fractionation during photosynthesis, as represented by ep37:2, is a function of seawater CO2 concentration and algal physiology. Constraining the algal physiological parameter, known as the ‘b’ term, is the key for successful applications of the alkenone-CO2 method. Using sensitivity analyses, we show that the growth rate (μ), cell size (r), and membrane permeability (P) are the most important variables to determine b. For all life on Earth, body size is a key factor that regulates metabolic rates. Exploiting the interdependence between phytoplankton cell size and growth rate, and specifically, the r – μ relationship for coccolithophores, we show that the length of fossil coccoliths (Lcoccolith) produced by ancient alkenone-synthesizers can be used to estimate r and therefore μ. Combining our new Lcoccolith data and published ep37:2 from the South China Sea Site MD01-2392, existing results from ODP Site 925, and ice core CO2, we determined the cell membrane permeability (P = 5.09 × 10−5 m s−1) for the Pleistocene community employing a bootstrap resampling technique. These new methods of constraining r, μ and P, combined with proxy-derived temperature (T), led us to rebuild b as a variable for each sample individually, which is subsequently used for alkenone-CO2 calculations. Application of this approach established pCO2 of the last 3 glacial-interglacial cycles, which turns out to be comparable with the ice core data in both the amplitude of changes and absolute values. It also reconciles the published Eocene – Oligocene alkenone-CO2 data which showed large geographical differences, with the new estimates much more consistent among different sites, and in line with other proxy-based results and ice sheet model predictions.
Published: 2020

50. Perturbing phytoplankton: response and isotopic fractionation with changing carbonate chemistry in two coccolithophore species

Author: R. E. M. Rickaby, J. Henderiks, and J. N. Young
Subjects: Environmental pollution, TD172-193.5, Environmental protection, TD169-171.8, Environmental sciences, GE1-350
Abstract: All species of coccolithophore appear to respond to perturbations of carbonate chemistry in a different way. Here, we show that the degree of malformation, growth rate and stable isotopic composition of organic matter and carbonate produced by two contrasting species of coccolithophore (Gephyrocapsa oceanica and Coccolithus pelagicus ssp. braarudii) are indicative of differences between their photosynthetic and calcification response to changing DIC levels (ranging from ~1100 to ~7800 μmol kg−1) at constant pH (8.13 ± 0.02). Gephyrocapsa oceanica thrived under all conditions of DIC, showing evidence of increased growth rates at higher DIC, but C. braarudii was detrimentally affected at high DIC showing signs of malformation, and decreased growth rates. The carbon isotopic fractionation into organic matter and the coccoliths suggests that C. braarudii utilises a common internal pool of carbon for calcification and photosynthesis but G. oceanica relies on independent supplies for each process. All coccolithophores appear to utilize bicarbonate as their ultimate source of carbon for calcification resulting in the release of a proton. But, we suggest that this proton can be harnessed to enhance the supply of CO2(aq) for photosynthesis either from a large internal HCO3- pool which acts as a pH buffer (C. braarudii), or pumped externally to aid the diffusive supply of CO2 across the membrane from the abundant HCO3- (G. oceanica), likely mediated by an internal and external carbonic anhydrase respectively. Our simplified hypothetical spectrum of physiologies may provide a context to understand different species response to changing pH and DIC, the species-specific εp and calcite "vital effects", as well as accounting for geological trends in coccolithophore cell size.
Published: 2010
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